Rw5G005600

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
5949385 .. 5952924
3540 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G005600.1

Sequence Viewer

Length: 2367 bp
ATGCCTTCGGAACTCGCAGCAGGATCCGTTGATGTTGCAGTTGATGCGGCTTCAGAGAATGCGAAGCAGCAGCCTGCACTGACTTTGGAACTCACTGCGCTAGTAACTATCAAAAGGAAAAGTGAAAAGAAGTTAAATACTATGAAAGACATGATGCTTAGGCCGCTTGACAATTATGCTTCACCAAATGGCCATGGTGATCATCATAAGCACTGGGGTGCTGTCCTACAGCTTGTTAGTACTCAAATCCACACAAAGGAAATGAAGCCAAACCTGAGTGAGGAAGCTATATTGGATTGGAATTTGAAAATGGGTGCCGGGAAGACCAGTACTTACCAAGTTAAATTTGTGGTGGATTCTAACTTTGGGATGCCAGGAGCCACCACGGTTAGCAACAGAGACCAGAGCGAGTTCTATTTGGATAGCATCAACATTGAAGGTGTTATTAATTTTGCCTGCAACTCTTGGGTTCAACCAGAGTGCAAAAACCCAGCAAAAAGAATCTTCTTCTCTGCCAATAAGGCATACTTACCTAGTGAAACACCAGCAGGGCTGAAAGAACTAAGAAAAATGGAGCTAATTCAACAGAGGGGTGATGGAACAGGATTTCGAAAACCATCTGATAGAATATACGATTATGACACTTACAATGACATTGGAAATCCTGATATTGGATACATAAAATCCTTGGAGGCAACAGACACCCATACCCTAGACGCTATACAATCCAGTATTCAATTTCGGTTTCTGCATAACTGTACTAATACTAGTGAAATCCACATTGATAATAAAACAGATAAGAATCTGGAGTCACCAGTAAATGAATTCCTGATGGCCTATGTGCCGAGAGATGAAGAGTTTGAGGAGTCCAAGATAGAAGCTCTTGATCTTGGAAAGTTAAAGGCAATTCTGAGGCACTGGATTACATCTTCTTGTTTGCCAGATGACGAGTTTGGCCGTCAAGCACTTGCAGGCATAAATCCTCTAAGCATAGAGAGACTCACAACTTTCCCACCTGTAGGCAAAATGAATGACTCAACTTATGGCCCACAAGAATCGGCATTCAAGGAAGAACACATAATAGGCCATGTAAATGGCATGTCTCTGCAACAGGCATTGGAAGAAAACAAACTGTTCATACTAGACTATCATGACATTTTACTTTCGTTAATCAACCAAATAAATGCTATGGATGACCGAAAAGCTTATGCAACACGTACAATTTTTTTCCTCACCTCATTGGGAACAATATTAAAGCCCATTGCTATTGAGCTCAAACTTGGCAAAGCCCATGTATGCTCCAATGATTCCTGCGTTCATCAACTCATTCATCACTGGTTGCGCAGCCATGCGTGTATGGAACCCTTTATCATGGCAACCCACCGGCAGCTGGGTGCGATGCATCCCATCTACAGGCTTCTCAAACCTCACATGCGATACACGATGAAGATAAATGCATTGGCCCGTCAATTTCTGATCAATTCTGAAGGAATAATCGAGTCGACTTTCACTGCTGGCAAACATAGCATGGAGATTAGTTGTGCTGCATATCGGGACTGGTGGCGCTTTGACCTTGAGGGCCTTCCTGCAGATCTCATCAGAAGAGGGATGGCAATACCAGACCCCAGTCAGGTCCATGGACTAAGATTACTGATCGAAGATTATCCTTACGCAACAGATGGGCTTCTCATATGGACAGCAATTAAGAGATTGGTTCAAACCTATGTCCATTATTACTATCCTGATGCAAGTGTGGTTCATTATGATACAGAACTACAAACCTGGTACAAGGAATGGATCAATTCAGGCCATGCTGATCTTCGCCATGCTAATTGGTGGCCAAAACTCTCTACTCCAGATGATCTTGTCTCCATTCTCACCACCATAATTTGGCTCTCATCAGCATTCCACGCTGCATTGAATAATGGGCAGTATCCATATGGCGGATATGTCCCAACCTGCCCCCCAAACATGCGGAGATTACTGCCACAAGAGCATGAACTAGAGTACGCTACTTTCATTAAGGATCCAGAAAAATATTTTCTTTCGTCATTGCCAAGTTTACTCGAAGCAACAAAGTATATGGCTGTGGTAGATATCATCTCAGGGCATTCCCCGGATGAGGAGTATATTGGGGAAAGAAAAGACTTGTCCACTTGGTCAGCTGACCCAGTTATCATCGAGGCATTCTACAGATTTTCTATGGATATGAGGAGAATTGAAAAGGAGATTGAACGAAGAAATGGCGATTCAAGACTACGTAACAGATGTGGGCCAGGGATTCCACCATACGAGCTGCTCTTGCCGAGCTCAGAACCTGGGTTACAGCCAGAGGAGTGCCTAATAGTATGTCAGTTTAAGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

788

Amino Acids

89.68

Weight (kDa)

5.78

Isoelectric Point (pI)

55.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 98 - 170 1.5e-06 PLAT/LH2 domain
Lipoxygenase PF00305 184 - 309 3.9e-19 Lipoxygenase
Lipoxygenase PF00305 311 - 426 3.3e-42 Lipoxygenase
Lipoxygenase PF00305 426 - 769 1.9e-165 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1343
Acc36I ACCTGC 1 cut(s) 1967
AccB1I GGYRCC 1 cut(s) 314
AccB7I CCANNNNNTGG 1 cut(s) 1890
AccI GTMKAC 1 cut(s) 1502
AciI CCGC 4 cut(s) 47, 164, 1944, 1975
AclWI GGATC 5 cut(s) 18, 31, 1805, 2021, 2034
AcoI YGGCCR 3 cut(s) 190, 955, 1838
AcsI RAATTY 3 cut(s) 301, 344, 824
AcuI CTGAAG 2 cut(s) 36, 1506
AfaI GTAC 6 cut(s) 241, 331, 760, 1219, 1787, 2009
AflIII ACRYGT 1 cut(s) 1214
AhlI ACTAGT 1 cut(s) 767
AjnI CCWGG 4 cut(s) 373, 1781, 2275, 2317
AleI CACNNNNGTG 1 cut(s) 216
Alw21I GWGCWC 2 cut(s) 1275, 2312
Alw26I GTCTC 4 cut(s) 393, 991, 1107, 1873
AlwI GGATC 5 cut(s) 18, 31, 1805, 2021, 2034
AlwNI CAGNNNCTG 1 cut(s) 2318
ApeKI GCWGC 8 cut(s) 17, 67, 70, 1344, 1387, 1544, 1913, 2296
ApoI RAATTY 3 cut(s) 301, 344, 824
AseI ATTAAT 1 cut(s) 447
AspLEI GCGC 3 cut(s) 100, 1344, 1566
AspS9I GGNCC 5 cut(s) 1046, 1462, 1579, 1633, 2273
AsuC2I CCSGG 2 cut(s) 319, 2117
AsuHPI GGTGA 6 cut(s) 174, 209, 605, 804, 1225, 1870
AsuII TTCGAA 1 cut(s) 610
AvaII GGWCC 1 cut(s) 1633
BalI TGGCCA 2 cut(s) 192, 1840
BamHI GGATCC 2 cut(s) 23, 2026
BanI GGYRCC 1 cut(s) 314
BanII GRGCYC 2 cut(s) 1275, 2312
BbsI GAAGAC 1 cut(s) 329
Bbv12I GWGCWC 2 cut(s) 1275, 2312
BbvI GCAGC 8 cut(s) 29, 79, 82, 1356, 1399, 1531, 1900, 2283
BccI CCATC 6 cut(s) 590, 625, 826, 1415, 1603, 1673
BceAI ACGGC 1 cut(s) 942
BciT130I CCWGG 4 cut(s) 375, 1783, 2277, 2319
BciVI GTATCC 2 cut(s) 668, 1944
BclI TGATCA 2 cut(s) 199, 1476
BcnI CCSGG 2 cut(s) 319, 2117
BcoDI GTCTC 4 cut(s) 393, 991, 1107, 1873
BcuI ACTAGT 1 cut(s) 767
BfaI CTAG 6 cut(s) 101, 534, 713, 768, 1142, 2003
BfmI CTRYAG 5 cut(s) 227, 1017, 1411, 1587, 2191
BfoI RGCGCY 1 cut(s) 1567
BfuAI ACCTGC 1 cut(s) 1967
BfuI GTATCC 2 cut(s) 668, 1944
BglI GCCNNNNNGGC 1 cut(s) 521
BglII AGATCT 1 cut(s) 1591
BmcAI AGTACT 2 cut(s) 241, 331
Bme1390I CCNGG 6 cut(s) 319, 375, 1783, 2117, 2277, 2319
Bme18I GGWCC 1 cut(s) 1633
BmgT120I GGNCC 5 cut(s) 1046, 1462, 1579, 1633, 2273
BmiI GGNNCC 5 cut(s) 25, 316, 379, 1362, 2028
BmrFI CCNGG 6 cut(s) 319, 375, 1783, 2117, 2277, 2319
BmrI ACTGGG 3 cut(s) 223, 1620, 2165
BmsI GCATC 7 cut(s) 34, 144, 360, 435, 1389, 1411, 1735
BmuI ACTGGG 3 cut(s) 223, 1620, 2165
BoxI GACNNNNGTC 1 cut(s) 1626
BpiI GAAGAC 1 cut(s) 329
BpmI CTGGAG 2 cut(s) 827, 1839
Bpu10I CCTNAGC 1 cut(s) 158
Bpu14I TTCGAA 1 cut(s) 610
BpuEI CTTGAG 1 cut(s) 1595
BpuMI CCSGG 2 cut(s) 319, 2117
BsaAI YACGTR 2 cut(s) 1217, 2261
BsaBI GATNNNNATC 1 cut(s) 801
BsaI GGTCTC 1 cut(s) 393
BsaJI CCNNGG 7 cut(s) 193, 384, 687, 1636, 2115, 2276, 2318
Bse118I RCCGGY 1 cut(s) 1383
Bse1I ACTGG 9 cut(s) 218, 327, 729, 815, 923, 1340, 1562, 1626, 2171
Bse3DI GCAATG 2 cut(s) 1260, 2051
Bse8I GATNNNNATC 1 cut(s) 801
BseBI CCWGG 4 cut(s) 375, 1783, 2277, 2319
BseDI CCNNGG 7 cut(s) 193, 384, 687, 1636, 2115, 2276, 2318
BseGI GGATG 5 cut(s) 375, 1198, 1402, 1614, 2125
BseJI GATNNNNATC 1 cut(s) 801
BseMI GCAATG 2 cut(s) 1260, 2051
BseMII CTCAG 4 cut(s) 266, 902, 2118, 2325
BseNI ACTGG 9 cut(s) 218, 327, 729, 815, 923, 1340, 1562, 1626, 2171
BseRI GAGGAG 4 cut(s) 878, 2138, 2227, 2348
BseXI GCAGC 8 cut(s) 29, 79, 82, 1356, 1399, 1531, 1900, 2283
BseYI CCCAGC 2 cut(s) 490, 1390
BsgI GTGCAG 1 cut(s) 60
BshNI GGYRCC 1 cut(s) 314
BsiHKAI GWGCWC 2 cut(s) 1275, 2312
BsiSI CCGG 3 cut(s) 318, 1384, 2117
BslFI GGGAC 2 cut(s) 1568, 1937
BsmAI GTCTC 4 cut(s) 393, 991, 1107, 1873
BsmFI GGGAC 2 cut(s) 1568, 1937
BsmI GAATGC 5 cut(s) 64, 1061, 1904, 2110, 2186
Bso31I GGTCTC 1 cut(s) 393
Bsp119I TTCGAA 1 cut(s) 610
Bsp1286I GDGCHC 2 cut(s) 1275, 2312
Bsp19I CCATGG 2 cut(s) 193, 1636
BspACI CCGC 4 cut(s) 47, 164, 1944, 1975
BspCNI CTCAG 4 cut(s) 267, 903, 2117, 2324
BspHI TCATGA 1 cut(s) 1150
BspLI GGNNCC 5 cut(s) 25, 316, 379, 1362, 2028
BspMAI CTGCAG 1 cut(s) 1591
BspMI ACCTGC 1 cut(s) 1967
BspPI GGATC 5 cut(s) 18, 31, 1805, 2021, 2034
BspT104I TTCGAA 1 cut(s) 610
BspT107I GGYRCC 1 cut(s) 314
BspTNI GGTCTC 1 cut(s) 393
BsrDI GCAATG 2 cut(s) 1260, 2051
BsrFI RCCGGY 1 cut(s) 1383
BsrI ACTGG 9 cut(s) 218, 327, 729, 815, 923, 1340, 1562, 1626, 2171
BssAI RCCGGY 1 cut(s) 1383
BssECI CCNNGG 7 cut(s) 193, 384, 687, 1636, 2115, 2276, 2318
BssT1I CCWWGG 3 cut(s) 193, 687, 1636
Bst2UI CCWGG 4 cut(s) 375, 1783, 2277, 2319
Bst4CI ACNGT 3 cut(s) 388, 758, 1134
Bst6I CTCTTC 2 cut(s) 849, 1597
BstAPI GCANNNNNTGC 1 cut(s) 44
BstBAI YACGTR 2 cut(s) 1217, 2261
BstBI TTCGAA 1 cut(s) 610
BstC8I GCNNGC 4 cut(s) 75, 457, 973, 1516
BstDEI CTNAG 8 cut(s) 158, 275, 563, 911, 986, 1643, 2104, 2311
BstDSI CCRYGG 3 cut(s) 193, 384, 1636
BstENI CCTNNNNNAGG 1 cut(s) 278
BstF5I GGATG 5 cut(s) 375, 1198, 1402, 1614, 2125
BstH2I RGCGCY 1 cut(s) 1567
BstHHI GCGC 3 cut(s) 100, 1344, 1566
BstMAI GTCTC 4 cut(s) 393, 991, 1107, 1873
BstMWI GCNNNNNNNGC 7 cut(s) 44, 163, 521, 1524, 1910, 1993, 2302
BstNI CCWGG 4 cut(s) 375, 1783, 2277, 2319
BstNSI RCATGY 3 cut(s) 1102, 1435, 1975
BstPAI GACNNNNGTC 1 cut(s) 1626
BstSCI CCNGG 6 cut(s) 317, 373, 1781, 2115, 2275, 2317
BstSFI CTRYAG 5 cut(s) 227, 1017, 1411, 1587, 2191
BstSNI TACGTA 1 cut(s) 2261
BstV1I GCAGC 8 cut(s) 29, 79, 82, 1356, 1399, 1531, 1900, 2283
BstV2I GAAGAC 1 cut(s) 329
BstX2I RGATCY 3 cut(s) 23, 1591, 2026
BstXI CCANNNNNNTGG 1 cut(s) 1094
BstYI RGATCY 3 cut(s) 23, 1591, 2026
BsuI GTATCC 2 cut(s) 668, 1944
BtgI CCRYGG 3 cut(s) 193, 384, 1636
BtgZI GCGATG 1 cut(s) 1412
BtsCI GGATG 5 cut(s) 375, 1198, 1402, 1614, 2125
BtsI GCAGTG 2 cut(s) 93, 1509
BtsIMutI CAGTG 6 cut(s) 77, 93, 211, 916, 1333, 1509
BveI ACCTGC 1 cut(s) 1967
Cac8I GCNNGC 4 cut(s) 75, 457, 973, 1516
CaiI CAGNNNCTG 1 cut(s) 2318
CciI TCATGA 1 cut(s) 1150
CfoI GCGC 3 cut(s) 100, 1344, 1566
Cfr10I RCCGGY 1 cut(s) 1383
Cfr13I GGNCC 5 cut(s) 1046, 1462, 1579, 1633, 2273
CseI GACGC 1 cut(s) 725
CsiI ACCWGGT 1 cut(s) 1781
Csp6I GTAC 6 cut(s) 240, 330, 759, 1218, 1786, 2008
CviQI GTAC 6 cut(s) 240, 330, 759, 1218, 1786, 2008
DdeI CTNAG 8 cut(s) 158, 275, 563, 911, 986, 1643, 2104, 2311
EaeI YGGCCR 3 cut(s) 190, 955, 1838
Eam1104I CTCTTC 2 cut(s) 849, 1597
EarI CTCTTC 2 cut(s) 849, 1597
EciI GGCGGA 1 cut(s) 1959
Ecl136II GAGCTC 2 cut(s) 1273, 2310
Eco105I TACGTA 1 cut(s) 2261
Eco130I CCWWGG 3 cut(s) 193, 687, 1636
Eco24I GRGCYC 2 cut(s) 1275, 2312
Eco31I GGTCTC 1 cut(s) 393
Eco32I GATATC 1 cut(s) 2098
Eco47I GGWCC 1 cut(s) 1633
Eco53kI GAGCTC 2 cut(s) 1273, 2310
Eco57I CTGAAG 2 cut(s) 36, 1506
EcoICRI GAGCTC 2 cut(s) 1273, 2310
EcoNI CCTNNNNNAGG 1 cut(s) 278
EcoO109I RGGNCCY 1 cut(s) 1579
EcoRI GAATTC 1 cut(s) 824
EcoRII CCWGG 4 cut(s) 373, 1781, 2275, 2317
EcoRV GATATC 1 cut(s) 2098
EcoT14I CCWWGG 3 cut(s) 193, 687, 1636
EcoT22I ATGCAT 2 cut(s) 1404, 1459
EcoT38I GRGCYC 2 cut(s) 1275, 2312
ErhI CCWWGG 3 cut(s) 193, 687, 1636
FalI AAGNNNNNCTT 2 cut(s) 512, 544
FaqI GGGAC 2 cut(s) 1568, 1937
FauNDI CATATG 2 cut(s) 1691, 1939
FbaI TGATCA 2 cut(s) 199, 1476
FblI GTMKAC 1 cut(s) 1502
FokI GGATG 5 cut(s) 382, 1205, 1389, 1621, 2132
FriOI GRGCYC 2 cut(s) 1275, 2312
FspBI CTAG 6 cut(s) 101, 534, 713, 768, 1142, 2003
FspI TGCGCA 1 cut(s) 1343
GlaI GCGC 3 cut(s) 99, 1343, 1565
GsaI CCCAGC 2 cut(s) 494, 1394
GsuI CTGGAG 2 cut(s) 827, 1839
HaeII RGCGCY 1 cut(s) 1567
HapII CCGG 3 cut(s) 318, 1384, 2117
HgaI GACGC 1 cut(s) 725
HhaI GCGC 3 cut(s) 100, 1344, 1566
Hin6I GCGC 3 cut(s) 98, 1342, 1564
HinP1I GCGC 3 cut(s) 98, 1342, 1564
HincII GTYRAC 1 cut(s) 1503
HindII GTYRAC 1 cut(s) 1503
HindIII AAGCTT 1 cut(s) 1203
HpaII CCGG 3 cut(s) 318, 1384, 2117
HphI GGTGA 6 cut(s) 174, 209, 605, 804, 1225, 1870
Hpy166II GTNNAC 3 cut(s) 1503, 2063, 2154
Hpy188I TCNGA 8 cut(s) 10, 55, 622, 912, 1476, 1486, 1601, 2314
Hpy8I GTNNAC 3 cut(s) 1503, 2063, 2154
HpyAV CCTTC 4 cut(s) 15, 431, 1481, 1592
HpyCH4III ACNGT 3 cut(s) 388, 758, 1134
HpyCH4IV ACGT 2 cut(s) 1216, 2260
HpyF10VI GCNNNNNNNGC 7 cut(s) 44, 163, 521, 1524, 1910, 1993, 2302
HpyF3I CTNAG 8 cut(s) 158, 275, 563, 911, 986, 1643, 2104, 2311
HpySE526I ACGT 2 cut(s) 1216, 2260
HspAI GCGC 3 cut(s) 98, 1342, 1564
Ksp22I TGATCA 2 cut(s) 199, 1476
LmnI GCTCC 3 cut(s) 377, 574, 1304
Lsp1109I GCAGC 8 cut(s) 29, 79, 82, 1356, 1399, 1531, 1900, 2283
LweI GCATC 7 cut(s) 34, 144, 360, 435, 1389, 1411, 1735
MabI ACCWGGT 1 cut(s) 1781
MaeI CTAG 6 cut(s) 101, 534, 713, 768, 1142, 2003
MaeII ACGT 2 cut(s) 1216, 2260
MaeIII GTNAC 4 cut(s) 103, 810, 2261, 2322
MflI RGATCY 3 cut(s) 23, 1591, 2026
MhlI GDGCHC 2 cut(s) 1275, 2312
MlsI TGGCCA 2 cut(s) 192, 1840
MluNI TGGCCA 2 cut(s) 192, 1840
MlyI GAGTC 5 cut(s) 818, 875, 993, 1028, 1508
Mox20I TGGCCA 2 cut(s) 192, 1840
Mph1103I ATGCAT 2 cut(s) 1404, 1459
MscI TGGCCA 2 cut(s) 192, 1840
MseI TTAA 9 cut(s) 134, 342, 447, 899, 1169, 1253, 1704, 2022, 2358
MslI CAYNNNNRTG 2 cut(s) 216, 1092
Msp20I TGGCCA 2 cut(s) 192, 1840
MspA1I CMGCKG 2 cut(s) 1390, 2165
MspI CCGG 3 cut(s) 318, 1384, 2117
MspR9I CCNGG 6 cut(s) 319, 375, 1783, 2117, 2277, 2319
Mva1269I GAATGC 5 cut(s) 64, 1061, 1904, 2110, 2186
MvaI CCWGG 4 cut(s) 375, 1783, 2277, 2319
MwoI GCNNNNNNNGC 7 cut(s) 44, 163, 521, 1524, 1910, 1993, 2302
NciI CCSGG 2 cut(s) 319, 2117
NcoI CCATGG 2 cut(s) 193, 1636
NdeI CATATG 2 cut(s) 1691, 1939
NlaIV GGNNCC 5 cut(s) 25, 316, 379, 1362, 2028
NmeAIII GCCGAG 2 cut(s) 870, 2331
NmuCI GTSAC 1 cut(s) 810
NsbI TGCGCA 1 cut(s) 1343
NsiI ATGCAT 2 cut(s) 1404, 1459
NspI RCATGY 3 cut(s) 1102, 1435, 1975
NspV TTCGAA 1 cut(s) 610
OliI CACNNNNGTG 1 cut(s) 216
PagI TCATGA 1 cut(s) 1150
PctI GAATGC 5 cut(s) 64, 1061, 1904, 2110, 2186
PfeI GAWTC 7 cut(s) 356, 501, 802, 1055, 1307, 2249, 2281
PflMI CCANNNNNTGG 1 cut(s) 1890
PleI GAGTC 5 cut(s) 817, 874, 993, 1028, 1507
PpsI GAGTC 5 cut(s) 817, 874, 993, 1028, 1507
Ppu21I YACGTR 2 cut(s) 1217, 2261
PshAI GACNNNNGTC 1 cut(s) 1626
PshBI ATTAAT 1 cut(s) 447
Psp124BI GAGCTC 2 cut(s) 1275, 2312
Psp6I CCWGG 4 cut(s) 373, 1781, 2275, 2317
PspFI CCCAGC 2 cut(s) 490, 1390
PspGI CCWGG 4 cut(s) 373, 1781, 2275, 2317
PspN4I GGNNCC 5 cut(s) 25, 316, 379, 1362, 2028
PspPI GGNCC 5 cut(s) 1046, 1462, 1579, 1633, 2273
PsrI GAACNNNNNNTAC 2 cut(s) 2307, 2339
PstI CTGCAG 1 cut(s) 1591
PstNI CAGNNNCTG 1 cut(s) 2318
PsuI RGATCY 3 cut(s) 23, 1591, 2026
PvuII CAGCTG 2 cut(s) 1390, 2165
RsaI GTAC 6 cut(s) 241, 331, 760, 1219, 1787, 2009
RsaNI GTAC 6 cut(s) 240, 330, 759, 1218, 1786, 2008
RseI CAYNNNNRTG 2 cut(s) 216, 1092
SacI GAGCTC 2 cut(s) 1275, 2312
SalI GTCGAC 1 cut(s) 1501
SaqAI TTAA 9 cut(s) 134, 342, 447, 899, 1169, 1253, 1704, 2022, 2358
Sau96I GGNCC 5 cut(s) 1046, 1462, 1579, 1633, 2273
ScaI AGTACT 2 cut(s) 241, 331
SchI GAGTC 5 cut(s) 818, 875, 993, 1028, 1508
ScrFI CCNGG 6 cut(s) 319, 375, 1783, 2117, 2277, 2319
SduI GDGCHC 2 cut(s) 1275, 2312
SexAI ACCWGGT 1 cut(s) 1781
SfaNI GCATC 7 cut(s) 34, 144, 360, 435, 1389, 1411, 1735
SfcI CTRYAG 5 cut(s) 227, 1017, 1411, 1587, 2191
SfuI TTCGAA 1 cut(s) 610
SinI GGWCC 1 cut(s) 1633
SmiMI CAYNNNNRTG 2 cut(s) 216, 1092
SmlI CTYRAG 1 cut(s) 1574
SmoI CTYRAG 1 cut(s) 1574
SnaBI TACGTA 1 cut(s) 2261
SpeI ACTAGT 1 cut(s) 767
SsiI CCGC 4 cut(s) 47, 164, 1944, 1975
SspI AATATT 2 cut(s) 1251, 2039
SspMI CTAG 6 cut(s) 101, 534, 713, 768, 1142, 2003
SstI GAGCTC 2 cut(s) 1275, 2312
StyD4I CCNGG 6 cut(s) 317, 373, 1781, 2115, 2275, 2317
StyI CCWWGG 3 cut(s) 193, 687, 1636
TaaI ACNGT 3 cut(s) 388, 758, 1134
TaiI ACGT 2 cut(s) 1219, 2263
TaqI TCGA 6 cut(s) 610, 1497, 1502, 1656, 2067, 2181
TaqII GACCGA 1 cut(s) 1212
TatI WGTACW 3 cut(s) 239, 329, 758
TauI GCSGC 2 cut(s) 50, 166
TfiI GAWTC 7 cut(s) 356, 501, 802, 1055, 1307, 2249, 2281
Tru1I TTAA 9 cut(s) 134, 342, 447, 899, 1169, 1253, 1704, 2022, 2358
Tru9I TTAA 9 cut(s) 134, 342, 447, 899, 1169, 1253, 1704, 2022, 2358
TscAI CASTG 6 cut(s) 84, 100, 218, 923, 1340, 1516
TseFI GTSAC 1 cut(s) 810
TseI GCWGC 8 cut(s) 17, 67, 70, 1344, 1387, 1544, 1913, 2296
Tsp45I GTSAC 1 cut(s) 810
TspGWI ACGGA 1 cut(s) 16
TspRI CASTG 6 cut(s) 84, 100, 218, 923, 1340, 1516
Van91I CCANNNNNTGG 1 cut(s) 1890
VpaK11BI GGWCC 1 cut(s) 1633
VspI ATTAAT 1 cut(s) 447
XagI CCTNNNNNAGG 1 cut(s) 278
XapI RAATTY 3 cut(s) 301, 344, 824
XceI RCATGY 3 cut(s) 1102, 1435, 1975
XmiI GTMKAC 1 cut(s) 1502
XspI CTAG 6 cut(s) 101, 534, 713, 768, 1142, 2003
ZrmI AGTACT 2 cut(s) 241, 331
Zsp2I ATGCAT 2 cut(s) 1404, 1459
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.