AT2G32940

Belongs to the argonaute family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0001253
Physical Location & Seq
Reverse (-)
13971916 .. 13977521
5606 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G32940.1

Sequence Viewer

Length: 2637 bp
ATGGAGACATCTTCATCTCTGCCACTGTCACCCATAAGTATAGAACCAGAACAGCCCAGCCATCGAGATTATGACATCACAACTAGACGTGGGGTTGGAACCACAGGCAACCCAATAGAATTGTGCACCAATCACTTTAATGTTTCTGTGAGACAGCCGGATGTAGTATTTTACCAGTACACTGTTAGTATCACCACAGAAAACGGTGATGCTGTTGATGGGACAGGAATAAGCAGAAAGCTTATGGACCAACTATTCAAGACTTACTCTTCTGATCTTGATGGTAAAAGGTTGGCATATGATGGAGAGAAGACTTTATATACTGTTGGTCCTCTACCACAGAACGAATTTGACTTTCTAGTCATCGTGGAAGGGTCATTTTCAAAACGTGATTGTGGTGTCTCTGATGGTGGTAGTTCTTCCGGTACTTGCAAGCGATCAAAACGTTCTTTCTTGCCAAGAAGTTACAAGGTTCAGATACATTATGCTGCAGAAATACCGTTGAAGACTGTTCTTGGCACTCAGAGAGGAGCTTATACACCAGATAAGAGTGCTCAGGATGCACTTAGAGTGCTTGACATTGTACTGAGGCAGCAAGCAGCTGAAAGGGGATGCCTTTTGGTCAGACAGGCATTTTTCCATAGCGATGGGCACCCCATGAAAGTTGGAGGAGGTGTTATAGGTATTCGAGGTTTACATTCGAGCTTTCGTCCAACTCATGGAGGACTCTCGCTTAACATTGATGTGTCAACAACAATGATCTTAGAACCTGGTCCAGTTATTGAATTCCTGAAAGCCAATCAGAGTGTTGAGACACCACGGCAAATCGACTGGATTAAGGCTGCGAAAATGCTTAAACATATGAGGGTTAAGGCAACACACCGTAACATGGAATTTAAAATTATAGGTCTAAGTTCGAAACCGTGCAATCAGCAACTGTTTTCAATGAAGATTAAAGATGGTGAACGTGAGGTACCTATTAGAGAGATTACTGTGTATGACTATTTCAAGCAAACCTACACAGAGCCTATTTCTTCTGCGTACTTTCCATGCCTTGATGTTGGCAAGCCAGATCGGCCCAACTATCTTCCACTGGAGTTTTGTAATCTTGTATCTCTGCAACGTTATACAAAACCATTGTCAGGGAGGCAAAGAGTTTTACTTGTTGAAAGTTCAAGACAAAAACCTCTAGAGAGAATTAAAACACTCAATGATGCAATGCATACCTACTGCTATGACAAGGACCCATTTTTGGCTGGATGTGGCATCTCCATTGAAAAAGAAATGACTCAAGTTGAAGGCCGTGTTCTCAAGCCCCCAATGCTGAAGTTTGGCAAGAATGAAGATTTTCAACCTTGCAACGGACGGTGGAACTTTAACAACAAGATGCTTCTAGAACCAAGAGCTATTAAAAGCTGGGCTATCGTCAACTTTTCTTTTCCATGCGACAGTAGTCACATTTCCCGTGAGCTTATAAGCTGTGGCATGAGGAAAGGCATTGAAATTGATCGACCTTTTGCACTAGTTGAAGAGGATCCACAGTACAAAAAAGCAGGTCCTGTTGAAAGGGTAGAAAAAATGATTGCAACGATGAAGTTAAAATTTCCAGATCCTCCTCATTTTATCCTCTGTATTCTGCCAGAACGGAAAACTTCTGATATCTATGGTCCCTGGAAGAAGATATGCCTCACTGAAGAAGGGATCCACACACAATGCATCTGCCCAATCAAGATCAGTGACCAATATCTCACCAATGTACTTCTGAAGATAAATTCGAAGCTTGGAGGCATCAATTCTCTGTTGGGAATAGAGTACTCTTACAACATTCCATTGATAAACAAAATTCCCACCTTGATTTTGGGTATGGATGTATCTCATGGGCCTCCAGGTCGGGCAGATGTTCCTTCAGTAGCAGCGGTTGTTGGTTCAAAATGCTGGCCCTTAATCTCAAGGTATAGGGCAGCTGTAAGAACTCAGTCACCACGTCTGGAGATGATTGATTCGCTCTTCCAACCTATCGAGAACACTGAGAAAGGAGATAACGGTATCATGAACGAATTATTTGTAGAGTTCTATCGGACAAGCAGGGCACGGAAACCTAAGCAGATTATCATTTTCAGGGATGGTGTGAGTGAATCACAGTTCGAGCAAGTCTTGAAGATCGAAGTGGACCAAATTATAAAGGCGTATCAACGTCTTGGTGAATCTGATGTGCCAAAATTCACTGTCATTGTGGCTCAGAAGAACCACCACACCAAGTTGTTTCAAGCTAAGGGTCCTGAAAATGTTCCTGCAGGAACTGTCGTGGACACCAAGATCGTACACCCGACAAACTACGATTTTTACATGTGTGCTCATGCAGGAAAAATAGGAACTTCAAGACCGGCTCATTACCATGTATTACTTGATGAGATTGGTTTCTCCCCCGATGACTTGCAGAATCTCATCCATTCTCTCTCCTATGTCAACCAACGTAGCACAACTGCAACTTCGATCGTGGCTCCAGTACGATACGCTCATCTTGCAGCAGCTCAAGTTGCGCAATTCACAAAGTTTGAAGGTATATCGGAGGACGGGAAAGTTCCAGAGCTTCCACGTCTGCACGAGAATGTCGAAGGCAACATGTTCTTCTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0034641 GO:0035194 GO:0035197 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061980 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

878

Amino Acids

98.68

Weight (kDa)

8.72

Isoelectric Point (pI)

39.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgoN PF16486 38 - 196 1.2e-25 N-terminal domain of argonaute
ArgoL1 PF08699 208 - 255 1.9e-15 Argonaute linker 1 domain
PAZ PF02170 261 - 386 5.1e-27 PAZ domain
ArgoL2 PF16488 398 - 444 2.1e-12 Argonaute linker 2 domain
Piwi PF02171 541 - 851 7.8e-109 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1475, 2180
AasI GACNNNNNNGTC 1 cut(s) 359
Acc16I TGCGCA 1 cut(s) 2541
Acc36I ACCTGC 1 cut(s) 1544
Acc65I GGTACC 1 cut(s) 973
AccB1I GGYRCC 2 cut(s) 651, 973
AccB7I CCANNNNNTGG 1 cut(s) 719
AciI CCGC 1 cut(s) 1916
AclI AACGTT 2 cut(s) 445, 1123
AclWI GGATC 5 cut(s) 1529, 1542, 1604, 1696, 1709
AcsI RAATTY 7 cut(s) 347, 785, 893, 1601, 1771, 1842, 2219
AcuI CTGAAG 4 cut(s) 1346, 1713, 1784, 1890
AfiI CCNNNNNNNGG 5 cut(s) 719, 889, 1142, 1252, 1361
AflIII ACRYGT 2 cut(s) 2346, 2622
AhlI ACTAGT 1 cut(s) 1522
AjiI CACGTC 3 cut(s) 89, 1985, 2597
AjnI CCWGG 3 cut(s) 769, 1670, 1885
Alw21I GWGCWC 3 cut(s) 128, 556, 2356
Alw26I GTCTC 3 cut(s) 145, 406, 806
Alw44I GTGCAC 1 cut(s) 124
AlwI GGATC 5 cut(s) 1529, 1542, 1604, 1696, 1709
AlwNI CAGNNNCTG 3 cut(s) 937, 1559, 2300
AoxI GGCC 4 cut(s) 1076, 1300, 1880, 1937
ApaLI GTGCAC 1 cut(s) 124
ApeKI GCWGC 8 cut(s) 488, 592, 599, 842, 1913, 1961, 2525, 2528
ApoI RAATTY 7 cut(s) 347, 785, 893, 1601, 1771, 1842, 2219
ArsI GACNNNNNNTTYG 2 cut(s) 1124, 1156
Asp700I GAANNNNTTC 2 cut(s) 1347, 2286
Asp718I GGTACC 1 cut(s) 973
AspLEI GCGC 1 cut(s) 2542
AsuHPI GGTGA 7 cut(s) 21, 184, 218, 974, 1741, 1971, 2213
AsuII TTCGAA 2 cut(s) 917, 1775
AvaII GGWCC 8 cut(s) 247, 329, 773, 1243, 1556, 1667, 2170, 2276
BaeGI GKGCMC 3 cut(s) 128, 654, 2092
BamHI GGATCC 2 cut(s) 1534, 1701
BanI GGYRCC 2 cut(s) 651, 973
BauI CACGAG 1 cut(s) 2603
BbsI GAAGAC 2 cut(s) 317, 512
Bbv12I GWGCWC 3 cut(s) 128, 556, 2356
BbvI GCAGC 8 cut(s) 475, 604, 611, 829, 1925, 1973, 2537, 2540
BccI CCATC 8 cut(s) 69, 212, 275, 296, 401, 641, 953, 2117
BceAI ACGGC 2 cut(s) 836, 1287
BciT130I CCWGG 3 cut(s) 771, 1672, 1887
BcoDI GTCTC 3 cut(s) 145, 406, 806
BcuI ACTAGT 1 cut(s) 1522
BfaI CTAG 5 cut(s) 84, 359, 1190, 1394, 1523
BfmI CTRYAG 2 cut(s) 489, 2292
BfuAI ACCTGC 1 cut(s) 1544
BglI GCCNNNNNGGC 1 cut(s) 1075
BisI GCNGC 8 cut(s) 489, 593, 600, 843, 1914, 1962, 2526, 2529
BlsI GCNGC 8 cut(s) 490, 594, 601, 844, 1915, 1963, 2527, 2530
BmcAI AGTACT 1 cut(s) 1814
Bme1390I CCNGG 3 cut(s) 771, 1672, 1887
Bme18I GGWCC 8 cut(s) 247, 329, 773, 1243, 1556, 1667, 2170, 2276
BmgBI CACGTC 3 cut(s) 89, 1985, 2597
BmiI GGNNCC 9 cut(s) 100, 653, 975, 1245, 1536, 1669, 1703, 2277, 2502
BmrFI CCNGG 3 cut(s) 771, 1672, 1887
BmsI GCATC 8 cut(s) 199, 550, 602, 1204, 1275, 1377, 1725, 1797
BoxI GACNNNNGTC 1 cut(s) 1452
BpiI GAAGAC 2 cut(s) 317, 512
BpmI CTGGAG 4 cut(s) 1115, 1869, 2009, 2487
Bpu10I CCTNAGC 3 cut(s) 555, 2100, 2271
Bpu14I TTCGAA 2 cut(s) 917, 1775
BpuEI CTTGAG 4 cut(s) 1275, 1295, 1933, 2517
BsaJI CCNNGG 2 cut(s) 818, 1670
BsaWI WCCGGW 1 cut(s) 422
BsaXI ACNNNNNCTCC 2 cut(s) 660, 690
Bsc4I CCNNNNNNNGG 5 cut(s) 719, 889, 1142, 1252, 1361
Bse118I RCCGGY 1 cut(s) 2383
Bse1I ACTGG 5 cut(s) 175, 776, 836, 1098, 2504
Bse3DI GCAATG 1 cut(s) 1224
BseBI CCWGG 3 cut(s) 771, 1672, 1887
BseDI CCNNGG 2 cut(s) 818, 1670
BseGI GGATG 7 cut(s) 166, 565, 617, 1265, 1873, 2128, 2445
BseLI CCNNNNNNNGG 5 cut(s) 719, 889, 1142, 1252, 1361
BseMI GCAATG 1 cut(s) 1224
BseMII CTCAG 6 cut(s) 536, 569, 578, 1988, 2019, 2252
BseNI ACTGG 5 cut(s) 175, 776, 836, 1098, 2504
BseRI GAGGAG 3 cut(s) 543, 684, 1605
BseSI GKGCMC 3 cut(s) 128, 654, 2092
BseXI GCAGC 8 cut(s) 475, 604, 611, 829, 1925, 1973, 2537, 2540
BseYI CCCAGC 2 cut(s) 56, 1416
BsgI GTGCAG 1 cut(s) 2585
Bsh1285I CGRYCG 1 cut(s) 2496
BshFI GGCC 4 cut(s) 1078, 1302, 1882, 1939
BshNI GGYRCC 2 cut(s) 651, 973
BsiEI CGRYCG 1 cut(s) 2496
BsiHKAI GWGCWC 3 cut(s) 128, 556, 2356
BsiSI CCGG 3 cut(s) 158, 423, 2384
BslFI GGGAC 2 cut(s) 235, 1653
BslI CCNNNNNNNGG 5 cut(s) 719, 889, 1142, 1252, 1361
BsmAI GTCTC 3 cut(s) 145, 406, 806
BsmFI GGGAC 2 cut(s) 235, 1653
BsnI GGCC 4 cut(s) 1078, 1302, 1882, 1939
Bsp119I TTCGAA 2 cut(s) 917, 1775
Bsp1286I GDGCHC 5 cut(s) 128, 556, 654, 2092, 2356
BspACI CCGC 1 cut(s) 1916
BspANI GGCC 4 cut(s) 1078, 1302, 1882, 1939
BspCNI CTCAG 6 cut(s) 535, 568, 579, 1987, 2020, 2251
BspHI TCATGA 1 cut(s) 2049
BspLI GGNNCC 9 cut(s) 100, 653, 975, 1245, 1536, 1669, 1703, 2277, 2502
BspMAI CTGCAG 2 cut(s) 493, 2296
BspMI ACCTGC 1 cut(s) 1544
BspPI GGATC 5 cut(s) 1529, 1542, 1604, 1696, 1709
BspQI GCTCTTC 1 cut(s) 2012
BspT104I TTCGAA 2 cut(s) 917, 1775
BspT107I GGYRCC 2 cut(s) 651, 973
BsrDI GCAATG 1 cut(s) 1224
BsrFI RCCGGY 1 cut(s) 2383
BsrI ACTGG 5 cut(s) 175, 776, 836, 1098, 2504
BssAI RCCGGY 1 cut(s) 2383
BssECI CCNNGG 2 cut(s) 818, 1670
BssSI CACGAG 1 cut(s) 2603
Bst2BI CACGAG 1 cut(s) 2603
Bst2UI CCWGG 3 cut(s) 771, 1672, 1887
Bst6I CTCTTC 3 cut(s) 274, 1524, 2012
BstBI TTCGAA 2 cut(s) 917, 1775
BstC8I GCNNGC 4 cut(s) 434, 597, 1067, 1937
BstDSI CCRYGG 1 cut(s) 818
BstF5I GGATG 7 cut(s) 166, 565, 617, 1265, 1873, 2128, 2445
BstHHI GCGC 1 cut(s) 2542
BstMAI GTCTC 3 cut(s) 145, 406, 806
BstMCI CGRYCG 1 cut(s) 2496
BstMWI GCNNNNNNNGC 5 cut(s) 560, 1075, 1321, 2522, 2537
BstNI CCWGG 3 cut(s) 771, 1672, 1887
BstNSI RCATGY 2 cut(s) 2350, 2626
BstPAI GACNNNNGTC 1 cut(s) 1452
BstSCI CCNGG 3 cut(s) 769, 1670, 1885
BstSFI CTRYAG 2 cut(s) 489, 2292
BstSLI GKGCMC 3 cut(s) 128, 654, 2092
BstV1I GCAGC 8 cut(s) 475, 604, 611, 829, 1925, 1973, 2537, 2540
BstV2I GAAGAC 2 cut(s) 317, 512
BstX2I RGATCY 3 cut(s) 1534, 1609, 1701
BstXI CCANNNNNNTGG 1 cut(s) 647
BstYI RGATCY 3 cut(s) 1534, 1609, 1701
BsuRI GGCC 4 cut(s) 1078, 1302, 1882, 1939
BtgI CCRYGG 1 cut(s) 818
BtgZI GCGATG 1 cut(s) 660
BtrI CACGTC 3 cut(s) 89, 1985, 2597
BtsCI GGATG 7 cut(s) 166, 565, 617, 1265, 1873, 2128, 2445
BtsIMutI CAGTG 7 cut(s) 23, 180, 1091, 1689, 1741, 2025, 2223
BveI ACCTGC 1 cut(s) 1544
Cac8I GCNNGC 4 cut(s) 434, 597, 1067, 1937
CaiI CAGNNNCTG 3 cut(s) 937, 1559, 2300
CciI TCATGA 1 cut(s) 2049
CfoI GCGC 1 cut(s) 2542
Cfr10I RCCGGY 1 cut(s) 2383
CsiI ACCWGGT 1 cut(s) 769
DraI TTTAAA 1 cut(s) 898
DrdI GACNNNNNNGTC 1 cut(s) 359
DseDI GACNNNNNNGTC 1 cut(s) 359
Eam1104I CTCTTC 3 cut(s) 274, 1524, 2012
EarI CTCTTC 3 cut(s) 274, 1524, 2012
Eco32I GATATC 1 cut(s) 1660
Eco47I GGWCC 8 cut(s) 247, 329, 773, 1243, 1556, 1667, 2170, 2276
Eco57I CTGAAG 4 cut(s) 1346, 1713, 1784, 1890
EcoO109I RGGNCCY 3 cut(s) 1243, 1556, 2276
EcoRI GAATTC 1 cut(s) 785
EcoRII CCWGG 3 cut(s) 769, 1670, 1885
EcoRV GATATC 1 cut(s) 1660
EcoT22I ATGCAT 2 cut(s) 1224, 1718
FaqI GGGAC 2 cut(s) 235, 1653
FauNDI CATATG 2 cut(s) 298, 861
Fnu4HI GCNGC 8 cut(s) 489, 593, 600, 843, 1914, 1962, 2526, 2529
FokI GGATG 7 cut(s) 173, 572, 624, 1272, 1880, 2135, 2432
Fsp4HI GCNGC 8 cut(s) 489, 593, 600, 843, 1914, 1962, 2526, 2529
FspBI CTAG 5 cut(s) 84, 359, 1190, 1394, 1523
FspI TGCGCA 1 cut(s) 2541
GlaI GCGC 1 cut(s) 2541
GluI GCNGC 8 cut(s) 489, 593, 600, 843, 1914, 1962, 2526, 2529
GsaI CCCAGC 2 cut(s) 60, 1420
GsuI CTGGAG 4 cut(s) 1115, 1869, 2009, 2487
HaeIII GGCC 4 cut(s) 1078, 1302, 1882, 1939
HapII CCGG 3 cut(s) 158, 423, 2384
HhaI GCGC 1 cut(s) 2542
Hin6I GCGC 1 cut(s) 2540
HinP1I GCGC 1 cut(s) 2540
HincII GTYRAC 3 cut(s) 750, 1429, 2467
HindII GTYRAC 3 cut(s) 750, 1429, 2467
HindIII AAGCTT 2 cut(s) 239, 1778
HinfI GANTC 6 cut(s) 726, 1288, 2000, 2135, 2204, 2440
HpaII CCGG 3 cut(s) 158, 423, 2384
HphI GGTGA 7 cut(s) 21, 184, 218, 974, 1741, 1971, 2213
HpyAV CCTTC 6 cut(s) 365, 1292, 1691, 1914, 2552, 2609
HpyCH4IV ACGT 9 cut(s) 88, 388, 445, 967, 1123, 1984, 2194, 2473, 2596
HpyF10VI GCNNNNNNNGC 5 cut(s) 560, 1075, 1321, 2522, 2537
HpySE526I ACGT 9 cut(s) 88, 388, 445, 967, 1123, 1984, 2194, 2473, 2596
HspAI GCGC 1 cut(s) 2540
KpnI GGTACC 1 cut(s) 977
LguI GCTCTTC 1 cut(s) 2012
LmnI GCTCC 2 cut(s) 530, 2506
Lsp1109I GCAGC 8 cut(s) 475, 604, 611, 829, 1925, 1973, 2537, 2540
LweI GCATC 8 cut(s) 199, 550, 602, 1204, 1275, 1377, 1725, 1797
MabI ACCWGGT 1 cut(s) 769
MaeI CTAG 5 cut(s) 84, 359, 1190, 1394, 1523
MaeII ACGT 9 cut(s) 88, 388, 445, 967, 1123, 1984, 2194, 2473, 2596
MaeIII GTNAC 6 cut(s) 27, 464, 884, 1454, 1736, 1977
MflI RGATCY 3 cut(s) 1534, 1609, 1701
MhlI GDGCHC 5 cut(s) 128, 556, 654, 2092, 2356
MlyI GAGTC 2 cut(s) 720, 1282
MmeI TCCRAC 4 cut(s) 76, 646, 737, 2035
Mph1103I ATGCAT 2 cut(s) 1224, 1718
MroXI GAANNNNTTC 2 cut(s) 1347, 2286
MslI CAYNNNNRTG 5 cut(s) 138, 645, 743, 2394, 2607
MspA1I CMGCKG 3 cut(s) 602, 1916, 1964
MspI CCGG 3 cut(s) 158, 423, 2384
MspR9I CCNGG 3 cut(s) 771, 1672, 1887
MvaI CCWGG 3 cut(s) 771, 1672, 1887
MwoI GCNNNNNNNGC 5 cut(s) 560, 1075, 1321, 2522, 2537
NdeI CATATG 2 cut(s) 298, 861
NlaIV GGNNCC 9 cut(s) 100, 653, 975, 1245, 1536, 1669, 1703, 2277, 2502
NmuCI GTSAC 4 cut(s) 27, 1454, 1736, 1977
NsbI TGCGCA 1 cut(s) 2541
NsiI ATGCAT 2 cut(s) 1224, 1718
NspI RCATGY 2 cut(s) 2350, 2626
NspV TTCGAA 2 cut(s) 917, 1775
PagI TCATGA 1 cut(s) 2049
PciI ACATGT 2 cut(s) 2346, 2622
PciSI GCTCTTC 1 cut(s) 2012
PcsI WCGNNNNNNNCGW 1 cut(s) 2610
PdmI GAANNNNTTC 2 cut(s) 1347, 2286
PfeI GAWTC 4 cut(s) 2000, 2135, 2204, 2440
PflMI CCANNNNNTGG 1 cut(s) 719
PkrI GCNGC 8 cut(s) 490, 594, 601, 844, 1915, 1963, 2527, 2530
Ple19I CGATCG 1 cut(s) 2496
PleI GAGTC 2 cut(s) 720, 1282
PpsI GAGTC 2 cut(s) 720, 1282
PpuMI RGGWCCY 3 cut(s) 1243, 1556, 2276
PscI ACATGT 2 cut(s) 2346, 2622
PshAI GACNNNNGTC 1 cut(s) 1452
PsiI TTATAA 2 cut(s) 1475, 2180
Psp1406I AACGTT 2 cut(s) 445, 1123
Psp5II RGGWCCY 3 cut(s) 1243, 1556, 2276
Psp6I CCWGG 3 cut(s) 769, 1670, 1885
PspFI CCCAGC 2 cut(s) 56, 1416
PspGI CCWGG 3 cut(s) 769, 1670, 1885
PspN4I GGNNCC 9 cut(s) 100, 653, 975, 1245, 1536, 1669, 1703, 2277, 2502
PspPPI RGGWCCY 3 cut(s) 1243, 1556, 2276
PsrI GAACNNNNNNTAC 2 cut(s) 957, 989
PstI CTGCAG 2 cut(s) 493, 2296
PstNI CAGNNNCTG 3 cut(s) 937, 1559, 2300
PsuI RGATCY 3 cut(s) 1534, 1609, 1701
PvuI CGATCG 1 cut(s) 2496
PvuII CAGCTG 2 cut(s) 602, 1964
RseI CAYNNNNRTG 5 cut(s) 138, 645, 743, 2394, 2607
SapI GCTCTTC 1 cut(s) 2012
SatI GCNGC 8 cut(s) 489, 593, 600, 843, 1914, 1962, 2526, 2529
SbfI CCTGCAGG 1 cut(s) 2296
ScaI AGTACT 1 cut(s) 1814
SchI GAGTC 2 cut(s) 720, 1282
ScrFI CCNGG 3 cut(s) 771, 1672, 1887
SdaI CCTGCAGG 1 cut(s) 2296
SduI GDGCHC 5 cut(s) 128, 556, 654, 2092, 2356
SexAI ACCWGGT 1 cut(s) 769
SfaNI GCATC 8 cut(s) 199, 550, 602, 1204, 1275, 1377, 1725, 1797
SfcI CTRYAG 2 cut(s) 489, 2292
SfuI TTCGAA 2 cut(s) 917, 1775
SinI GGWCC 8 cut(s) 247, 329, 773, 1243, 1556, 1667, 2170, 2276
SmiMI CAYNNNNRTG 5 cut(s) 138, 645, 743, 2394, 2607
SmlI CTYRAG 4 cut(s) 1290, 1310, 1948, 2532
SmoI CTYRAG 4 cut(s) 1290, 1310, 1948, 2532
SpeI ACTAGT 1 cut(s) 1522
Sse8387I CCTGCAGG 1 cut(s) 2296
SsiI CCGC 1 cut(s) 1916
SspMI CTAG 5 cut(s) 84, 359, 1190, 1394, 1523
StyD4I CCNGG 3 cut(s) 769, 1670, 1885
TaiI ACGT 9 cut(s) 91, 391, 448, 970, 1126, 1987, 2197, 2476, 2599
TatI WGTACW 5 cut(s) 177, 583, 1542, 1756, 1812
TfiI GAWTC 4 cut(s) 2000, 2135, 2204, 2440
TscAI CASTG 7 cut(s) 30, 187, 1098, 1696, 1741, 2032, 2230
TseFI GTSAC 4 cut(s) 27, 1454, 1736, 1977
TseI GCWGC 8 cut(s) 488, 592, 599, 842, 1913, 1961, 2525, 2528
Tsp45I GTSAC 4 cut(s) 27, 1454, 1736, 1977
TspDTI ATGAA 5 cut(s) 674, 962, 1356, 1607, 2066
TspGWI ACGGA 3 cut(s) 1377, 1660, 2107
TspRI CASTG 7 cut(s) 30, 187, 1098, 1696, 1741, 2032, 2230
Van91I CCANNNNNTGG 1 cut(s) 719
VneI GTGCAC 1 cut(s) 124
VpaK11BI GGWCC 8 cut(s) 247, 329, 773, 1243, 1556, 1667, 2170, 2276
XapI RAATTY 7 cut(s) 347, 785, 893, 1601, 1771, 1842, 2219
XbaI TCTAGA 2 cut(s) 1189, 1393
XceI RCATGY 2 cut(s) 2350, 2626
XcmI CCANNNNNNNNNTGG 1 cut(s) 1855
XmnI GAANNNNTTC 2 cut(s) 1347, 2286
XspI CTAG 5 cut(s) 84, 359, 1190, 1394, 1523
ZrmI AGTACT 1 cut(s) 1814
Zsp2I ATGCAT 2 cut(s) 1224, 1718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.