RLG00000021044

Belongs to the argonaute family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0001253
Physical Location & Seq
Reverse (-)
71316289 .. 71322385
6097 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021044

Sequence Viewer

Length: 2442 bp
ATGGTGGATGTAGCTGGTGCTGGTGCTGGTGCTGGTGCTGGGAAGGCAGGTGGGGAACCAGATTTGATCCCACCACCTCCTCCAACCATTCCGCCCAATGTGAAGCCAGAAGTCCTGAGTTCTCCCAAGTATTCTATTATGAGTAGGCGTGGTACTGGAACAACTGGGAGACGCATACAATTGCTCGCAAACCACTTCAAAGTCACTGTGAAAGCTCCAGATGCTGTATTCTACCAGTATTCTGTTCATATTACTTCTGAAGACAAGAGGGCCGTTGAAGGCAAGGGAATTGGCAGAAAACTAGTTGATAGGCTCTATCAAACATATTCTTCTGAACTTGCTGGTAAGAAGTTTGCGTATGATGGAGAGAAAGCTCTGTATACAGTTGGTCCTCTGCCACAGAACAAGCTTGAGTTTACAGTCGTGCTGGAGGAGACATTTGCAAAGAGTGAAAGTGGGAGTCCCAGTGAAGTGGCTGAAAAACGATCAAGACGATCTCTTCAGTCAAAAACTTTTACCGTAGAGTTAAGTTATGCTGCCAAAATACCTCTGAAGTCAATTGCTCTTGCCCTCAAAGGAGCTGATGTTGACAATACTCAGGATGCATTGAGAGTGCTTGATATTATTCTACGGCAGCAAGCAGCTAACATGGGTTGCCTTCTGGTACGACAGTCATTCTTTCATGATGACTCCAGGAACTTTACTGATGTTGGGGCAGGTGTGATTGGTGTTCGGGGATTTCATTCCAGTTTCCGTCCAACTCAGGGTGGTTTGTCCTTGAATATGGATGTATCTACAACAATGATCATGACTCCTGGACCAGTAATAGATTTTCTGATTGCCAACCAGGGTGTGCGAGAACCCCGCAACATTGACTGGGTCAAGGCCAAGAGAATGCTGAAAAACATGAGGATTAAGACGAGACACCGTAACATGGAATTTAAAATAATAGGCATCAGCGAGAAGCCCTGCAATCTGCAATACTTTCCTATGAAGTTAAAGCCTGGTGGTGGTGCAAGTGAAGGGGAGACTGCAGAGGTTACTGTGTTTGAGTATTTCACCAAACACTGTGGCATTGAACTCACTTACTCTGCATACCTGCCATGCCTTGATGTTGGCAAACCAAAAAGGCCCAACTATCTGCCTCTGGAGCTCTGTGCGCTTGTTTCATTACAACGGTATACGAAAGCATTATCTTCACAGCAGAGGGCATCCTTAGTTGAAAAATCAAGGCAGAAGCCTCAGGACAGAATACGAACGGTGACTGATGCTGTATGCAAATACCAGTATGATAGTGATCCTGTGCTTACTACATGTGGTATTTCTATAGAGAAGCAATTAACTCAGTTTGAAGGGCGCGTTCTTGATACTCCGAAGTTAAAGGTAGGTAACAGTGAGGATTGTACCCCTTTTAAGGGACGATGGAACTTCAACAACAAGACACTTTTGAACCCCACTCGCATTGACCGCTGGATTGTTGTCAACTTCTCTGCACGCTGTGATACCAGCCATATCTCGAGGGAGCTTATCAACAGTGGGAGGAAAAAGGGCATTGTAGGGCCTTGGAAGAAAAAGAGTCTCAGTGATTTCGGTATTGTCACACAATGCATTTCCCCTTCCAAGATTAATGATCAGTACCTTACCAATGTGCTTCTGAAAATCAATTCTAAGCTTGGAGGAATAAATTCTTTGTTGGCGCTAGAGCATTCCTCACGTGTCCCTTTGATAAAAGATACTCCTACGATGATTTTGGGGATGGATGTGGAAATGATTGATGCTCTTTACAAGCCACTGGCAAATGGAAAAGATGATGGTATTATCAGGGAACTGCTTGTCGACTTCTATAAGACAAGCGGTGGACGTAAACCAACTCAGATTATTGTCTTCAGGGATGGAGTAAGTGAATCACAGTTTAATCAAGTCCTGAACATTGAGCTGGATCAAATCGTAAAGGCTTACCAGCACCTAGGGGAGGCTAATATTCCAAAGTTTACTGTGATTGTGGCTCAGAAGAATCATCACACAAAGCTATTCCAAACTAATTCCCCTGATAATGTTCCACCAGGGACTGTTGTTGACACCAAAATTGTGCATCCAAGGAATTATGATTTCTACATGTGTGCTCAGGCAGGCATGATTGGAACTTCCAGGCCAGCTCACTATCATGTCTTGCTTGATGAGATTGGCTTTTCCCCTGATGACTTGCAAAACCTGATCCACTCCCTTTCTTATGTGTACCAGAGAAGTACAACTGCAATCTCTATTGTGGCGCCCATATGCTACGCGCACCTTGCTGCAGCACAAGTGGGGCAGTTCATGAAGTTTGAAGATCTCTCGGACACCTCATCGGGGAAGGGCAGTGTCACTTCATCAGAGAGCATCCCAGTTCAAGAGCTTCCCAGGCTTCATGAGAAGGTCCAGGGCTCCATGTTCTTCTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0034641 GO:0035194 GO:0035197 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061980 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

814

Amino Acids

90.04

Weight (kDa)

9.21

Isoelectric Point (pI)

36.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgoN PF16486 57 - 210 2.2e-31 N-terminal domain of argonaute
ArgoL1 PF08699 222 - 269 2.3e-17 Argonaute linker 1 domain
PAZ PF02170 276 - 406 2.1e-29 PAZ domain
ArgoL2 PF16488 416 - 461 1.9e-09 Argonaute linker 2 domain
Piwi PF02171 514 - 589 1.6e-14 Piwi domain
Piwi PF02171 606 - 774 7.9e-70 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 38, 707
Acc36I ACCTGC 3 cut(s) 38, 707, 1107
AccB1I GGYRCC 1 cut(s) 2269
AccI GTMKAC 3 cut(s) 380, 1181, 1836
AccII CGCG 2 cut(s) 1359, 2285
AciI CCGC 4 cut(s) 92, 865, 1468, 1854
AclWI GGATC 4 cut(s) 61, 1292, 1947, 2209
AcsI RAATTY 2 cut(s) 938, 1684
AcuI CTGAAG 4 cut(s) 279, 485, 572, 1870
AcvI CACGTG 1 cut(s) 1715
AcyI GRCGYC 1 cut(s) 2270
AdeI CACNNNGTG 1 cut(s) 1499
AfaI GTAC 6 cut(s) 154, 666, 1405, 1637, 2237, 2248
AfiI CCNNNNNNNGG 7 cut(s) 764, 934, 1010, 1414, 1415, 1972, 2349
AflIII ACRYGT 3 cut(s) 1313, 1714, 2115
AhlI ACTAGT 1 cut(s) 301
AjnI CCWGG 8 cut(s) 692, 814, 846, 1003, 2062, 2147, 2399, 2418
Alw21I GWGCWC 2 cut(s) 1155, 2125
Alw26I GTCTC 5 cut(s) 163, 428, 916, 1022, 1583
AlwI GGATC 4 cut(s) 61, 1292, 1947, 2209
AlwNI CAGNNNCTG 2 cut(s) 224, 2069
Ama87I CYCGRG 1 cut(s) 1516
AoxI GGCC 5 cut(s) 270, 885, 1130, 1559, 2150
ApeKI GCWGC 5 cut(s) 536, 634, 641, 2294, 2297
ApoI RAATTY 2 cut(s) 938, 1684
AseI ATTAAT 1 cut(s) 1626
Asp700I GAANNNNTTC 1 cut(s) 1684
AspA2I CCTAGG 1 cut(s) 1966
AspLEI GCGC 5 cut(s) 1162, 1359, 1699, 2272, 2287
AspS9I GGNCC 6 cut(s) 270, 389, 818, 1131, 1559, 2416
AsuHPI GGTGA 2 cut(s) 1051, 1273
AvaI CYCGRG 1 cut(s) 1516
AvaII GGWCC 3 cut(s) 389, 818, 2416
AvrII CCTAGG 1 cut(s) 1966
AxyI CCTNAGG 1 cut(s) 1242
BaeI ACNNNNGTAYC 2 cut(s) 656, 689
BanI GGYRCC 1 cut(s) 2269
BanII GRGCYC 2 cut(s) 1155, 2426
BbrPI CACGTG 1 cut(s) 1715
BbsI GAAGAC 2 cut(s) 267, 1876
Bbv12I GWGCWC 2 cut(s) 1155, 2125
BbvI GCAGC 5 cut(s) 523, 646, 653, 2281, 2309
BccI CCATC 5 cut(s) 356, 1416, 1750, 1805, 1886
BceAI ACGGC 2 cut(s) 257, 647
BciT130I CCWGG 8 cut(s) 694, 816, 848, 1005, 2064, 2149, 2401, 2420
BclI TGATCA 2 cut(s) 804, 1630
BcoDI GTCTC 5 cut(s) 163, 428, 916, 1022, 1583
BcuI ACTAGT 1 cut(s) 301
BfaI CTAG 3 cut(s) 302, 1700, 1967
BfmI CTRYAG 3 cut(s) 1032, 1326, 2295
BfoI RGCGCY 2 cut(s) 1700, 2273
BfuAI ACCTGC 3 cut(s) 38, 707, 1107
BglII AGATCT 1 cut(s) 2329
BisI GCNGC 5 cut(s) 537, 635, 642, 2295, 2298
BlnI CCTAGG 1 cut(s) 1966
BlsI GCNGC 5 cut(s) 538, 636, 643, 2296, 2299
Bme1390I CCNGG 8 cut(s) 694, 816, 848, 1005, 2064, 2149, 2401, 2420
Bme18I GGWCC 3 cut(s) 389, 818, 2416
BmeT110I CYCGRG 1 cut(s) 1516
BmgT120I GGNCC 6 cut(s) 270, 389, 818, 1131, 1559, 2416
BmiI GGNNCC 3 cut(s) 57, 2271, 2425
BmrFI CCNGG 8 cut(s) 694, 816, 848, 1005, 2064, 2149, 2401, 2420
BmrI ACTGGG 4 cut(s) 174, 459, 886, 2378
BmsI GCATC 8 cut(s) 211, 592, 963, 1220, 1258, 1765, 2101, 2388
BmuI ACTGGG 4 cut(s) 174, 459, 886, 2378
BpiI GAAGAC 2 cut(s) 267, 1876
BplI GAGNNNNNCTC 2 cut(s) 1694, 1726
BpmI CTGGAG 4 cut(s) 201, 449, 676, 1169
Bpu10I CCTNAGC 1 cut(s) 2124
BpuEI CTTGAG 1 cut(s) 431
BsaAI YACGTR 1 cut(s) 1715
BsaBI GATNNNNATC 1 cut(s) 1296
BsaHI GRCGYC 1 cut(s) 2270
BsaJI CCNNGG 7 cut(s) 847, 1562, 1966, 2063, 2096, 2399, 2419
BsaXI ACNNNNNCTCC 4 cut(s) 451, 481, 570, 600
Bsc4I CCNNNNNNNGG 7 cut(s) 764, 934, 1010, 1414, 1415, 1972, 2349
Bse21I CCTNAGG 1 cut(s) 1242
Bse8I GATNNNNATC 1 cut(s) 1296
BseBI CCWGG 8 cut(s) 694, 816, 848, 1005, 2064, 2149, 2401, 2420
BseDI CCNNGG 7 cut(s) 847, 1562, 1966, 2063, 2096, 2399, 2419
BseGI GGATG 9 cut(s) 13, 607, 793, 1211, 1761, 1765, 1897, 2092, 2379
BseJI GATNNNNATC 1 cut(s) 1296
BseLI CCNNNNNNNGG 7 cut(s) 764, 934, 1010, 1414, 1415, 1972, 2349
BseMII CTCAG 9 cut(s) 107, 611, 776, 1256, 1358, 1594, 1886, 2021, 2138
BseRI GAGGAG 2 cut(s) 69, 446
BseXI GCAGC 5 cut(s) 523, 646, 653, 2281, 2309
BseYI CCCAGC 1 cut(s) 38
BsgI GTGCAG 1 cut(s) 1476
Bsh1236I CGCG 2 cut(s) 1359, 2285
BshFI GGCC 5 cut(s) 272, 887, 1132, 1561, 2152
BshNI GGYRCC 1 cut(s) 2269
BsiHKAI GWGCWC 2 cut(s) 1155, 2125
BsiHKCI CYCGRG 1 cut(s) 1516
BslFI GGGAC 4 cut(s) 447, 1431, 1703, 2080
BslI CCNNNNNNNGG 7 cut(s) 764, 934, 1010, 1414, 1415, 1972, 2349
BsmAI GTCTC 5 cut(s) 163, 428, 916, 1022, 1583
BsmBI CGTCTC 1 cut(s) 163
BsmFI GGGAC 4 cut(s) 447, 1431, 1703, 2080
BsmI GAATGC 2 cut(s) 900, 1705
BsnI GGCC 5 cut(s) 272, 887, 1132, 1561, 2152
BsoBI CYCGRG 1 cut(s) 1516
Bsp1286I GDGCHC 3 cut(s) 1155, 2125, 2426
Bsp143I GATC 9 cut(s) 66, 485, 494, 804, 1297, 1630, 1939, 2214, 2329
BspACI CCGC 4 cut(s) 92, 865, 1468, 1854
BspANI GGCC 5 cut(s) 272, 887, 1132, 1561, 2152
BspCNI CTCAG 9 cut(s) 108, 610, 775, 1255, 1357, 1593, 1885, 2020, 2137
BspFNI CGCG 2 cut(s) 1359, 2285
BspHI TCATGA 4 cut(s) 682, 807, 2316, 2407
BspLI GGNNCC 3 cut(s) 57, 2271, 2425
BspMAI CTGCAG 2 cut(s) 1036, 2299
BspMI ACCTGC 3 cut(s) 38, 707, 1107
BspPI GGATC 4 cut(s) 61, 1292, 1947, 2209
BspT107I GGYRCC 1 cut(s) 2269
BssECI CCNNGG 7 cut(s) 847, 1562, 1966, 2063, 2096, 2399, 2419
BssMI GATC 9 cut(s) 66, 485, 494, 804, 1297, 1630, 1939, 2214, 2329
BssNAI GTATAC 2 cut(s) 381, 1182
BssNI GRCGYC 1 cut(s) 2270
BssT1I CCWWGG 3 cut(s) 1562, 1966, 2096
Bst1107I GTATAC 2 cut(s) 381, 1182
Bst2UI CCWGG 8 cut(s) 694, 816, 848, 1005, 2064, 2149, 2401, 2420
Bst6I CTCTTC 1 cut(s) 504
BstACI GRCGYC 1 cut(s) 2270
BstBAI YACGTR 1 cut(s) 1715
BstC8I GCNNGC 5 cut(s) 186, 639, 1495, 2131, 2154
BstENI CCTNNNNNAGG 1 cut(s) 1970
BstF5I GGATG 9 cut(s) 13, 607, 793, 1211, 1761, 1765, 1897, 2092, 2379
BstFNI CGCG 2 cut(s) 1359, 2285
BstH2I RGCGCY 2 cut(s) 1700, 2273
BstHHI GCGC 5 cut(s) 1162, 1359, 1699, 2272, 2287
BstKTI GATC 9 cut(s) 69, 488, 497, 807, 1300, 1633, 1942, 2217, 2332
BstMAI GTCTC 5 cut(s) 163, 428, 916, 1022, 1583
BstMBI GATC 9 cut(s) 66, 485, 494, 804, 1297, 1630, 1939, 2214, 2329
BstMWI GCNNNNNNNGC 7 cut(s) 44, 221, 1150, 1159, 1467, 2291, 2401
BstNI CCWGG 8 cut(s) 694, 816, 848, 1005, 2064, 2149, 2401, 2420
BstNSI RCATGY 2 cut(s) 1317, 2119
BstSCI CCNGG 8 cut(s) 692, 814, 846, 1003, 2062, 2147, 2399, 2418
BstSFI CTRYAG 3 cut(s) 1032, 1326, 2295
BstUI CGCG 2 cut(s) 1359, 2285
BstV1I GCAGC 5 cut(s) 523, 646, 653, 2281, 2309
BstV2I GAAGAC 2 cut(s) 267, 1876
BstX2I RGATCY 1 cut(s) 2329
BstXI CCANNNNNNTGG 1 cut(s) 472
BstYI RGATCY 1 cut(s) 2329
BstZ17I GTATAC 2 cut(s) 381, 1182
Bsu36I CCTNAGG 1 cut(s) 1242
BsuRI GGCC 5 cut(s) 272, 887, 1132, 1561, 2152
BtsCI GGATG 9 cut(s) 13, 607, 793, 1211, 1761, 1765, 1897, 2092, 2379
BtsI GCAGTG 1 cut(s) 2365
BtsIMutI CAGTG 8 cut(s) 204, 472, 1066, 1399, 1540, 1588, 1790, 2365
BveI ACCTGC 3 cut(s) 38, 707, 1107
Cac8I GCNNGC 5 cut(s) 186, 639, 1495, 2131, 2154
CaiI CAGNNNCTG 2 cut(s) 224, 2069
CciI TCATGA 4 cut(s) 682, 807, 2316, 2407
CfoI GCGC 5 cut(s) 1162, 1359, 1699, 2272, 2287
Cfr13I GGNCC 6 cut(s) 270, 389, 818, 1131, 1559, 2416
CseI GACGC 1 cut(s) 180
Csp6I GTAC 6 cut(s) 153, 665, 1404, 1636, 2236, 2247
CspCI CAANNNNNGTGG 4 cut(s) 1051, 1086, 1444, 1479
CviQI GTAC 6 cut(s) 153, 665, 1404, 1636, 2236, 2247
DinI GGCGCC 1 cut(s) 2271
DpnI GATC 9 cut(s) 68, 487, 496, 806, 1299, 1632, 1941, 2216, 2331
DpnII GATC 9 cut(s) 66, 485, 494, 804, 1297, 1630, 1939, 2214, 2329
DraI TTTAAA 1 cut(s) 943
DraIII CACNNNGTG 1 cut(s) 1499
Eam1104I CTCTTC 1 cut(s) 504
EarI CTCTTC 1 cut(s) 504
EciI GGCGGA 1 cut(s) 81
Ecl136II GAGCTC 1 cut(s) 1153
Eco130I CCWWGG 3 cut(s) 1562, 1966, 2096
Eco24I GRGCYC 2 cut(s) 1155, 2426
Eco47I GGWCC 3 cut(s) 389, 818, 2416
Eco53kI GAGCTC 1 cut(s) 1153
Eco57I CTGAAG 4 cut(s) 279, 485, 572, 1870
Eco72I CACGTG 1 cut(s) 1715
Eco81I CCTNAGG 1 cut(s) 1242
Eco88I CYCGRG 1 cut(s) 1516
EcoICRI GAGCTC 1 cut(s) 1153
EcoNI CCTNNNNNAGG 1 cut(s) 1970
EcoO109I RGGNCCY 1 cut(s) 1559
EcoRII CCWGG 8 cut(s) 692, 814, 846, 1003, 2062, 2147, 2399, 2418
EcoT14I CCWWGG 3 cut(s) 1562, 1966, 2096
EcoT22I ATGCAT 2 cut(s) 607, 1610
EcoT38I GRGCYC 2 cut(s) 1155, 2426
EgeI GGCGCC 1 cut(s) 2271
EheI GGCGCC 1 cut(s) 2271
ErhI CCWWGG 3 cut(s) 1562, 1966, 2096
Esp3I CGTCTC 1 cut(s) 163
FaqI GGGAC 4 cut(s) 447, 1431, 1703, 2080
FauI CCCGC 1 cut(s) 872
FauNDI CATATG 1 cut(s) 2276
FbaI TGATCA 2 cut(s) 804, 1630
FblI GTMKAC 3 cut(s) 380, 1181, 1836
Fnu4HI GCNGC 5 cut(s) 537, 635, 642, 2295, 2298
FokI GGATG 9 cut(s) 20, 614, 800, 1198, 1768, 1772, 1904, 2079, 2366
FriOI GRGCYC 2 cut(s) 1155, 2426
Fsp4HI GCNGC 5 cut(s) 537, 635, 642, 2295, 2298
FspBI CTAG 3 cut(s) 302, 1700, 1967
GlaI GCGC 5 cut(s) 1161, 1358, 1698, 2271, 2286
GluI GCNGC 5 cut(s) 537, 635, 642, 2295, 2298
GsaI CCCAGC 1 cut(s) 42
GsuI CTGGAG 4 cut(s) 201, 449, 676, 1169
HaeII RGCGCY 2 cut(s) 1700, 2273
HaeIII GGCC 5 cut(s) 272, 887, 1132, 1561, 2152
HgaI GACGC 1 cut(s) 180
HhaI GCGC 5 cut(s) 1162, 1359, 1699, 2272, 2287
Hin1I GRCGYC 1 cut(s) 2270
Hin6I GCGC 5 cut(s) 1160, 1357, 1697, 2270, 2285
HinP1I GCGC 5 cut(s) 1160, 1357, 1697, 2270, 2285
HincII GTYRAC 4 cut(s) 589, 1483, 1837, 2077
HindII GTYRAC 4 cut(s) 589, 1483, 1837, 2077
HindIII AAGCTT 2 cut(s) 407, 1670
HinfI GANTC 6 cut(s) 460, 689, 811, 1576, 1904, 2014
HphI GGTGA 2 cut(s) 1051, 1273
HpyAV CCTTC 8 cut(s) 37, 272, 668, 1016, 1346, 1626, 2347, 2407
HpyCH4IV ACGT 2 cut(s) 1714, 1861
HpyF10VI GCNNNNNNNGC 7 cut(s) 44, 221, 1150, 1159, 1467, 2291, 2401
HpySE526I ACGT 2 cut(s) 1714, 1861
Hsp92I GRCGYC 1 cut(s) 2270
HspAI GCGC 5 cut(s) 1160, 1357, 1697, 2270, 2285
KasI GGCGCC 1 cut(s) 2269
Ksp22I TGATCA 2 cut(s) 804, 1630
Kzo9I GATC 9 cut(s) 66, 485, 494, 804, 1297, 1630, 1939, 2214, 2329
LmnI GCTCC 5 cut(s) 220, 578, 1150, 1522, 2429
Lsp1109I GCAGC 5 cut(s) 523, 646, 653, 2281, 2309
LweI GCATC 8 cut(s) 211, 592, 963, 1220, 1258, 1765, 2101, 2388
MaeI CTAG 3 cut(s) 302, 1700, 1967
MaeII ACGT 2 cut(s) 1714, 1861
MaeIII GTNAC 7 cut(s) 202, 929, 1039, 1261, 1388, 1597, 2362
MalI GATC 9 cut(s) 68, 487, 496, 806, 1299, 1632, 1941, 2216, 2331
MboI GATC 9 cut(s) 66, 485, 494, 804, 1297, 1630, 1939, 2214, 2329
MboII GAAGA 9 cut(s) 272, 321, 491, 1188, 1579, 1876, 2023, 2339, 2425
MfeI CAATTG 2 cut(s) 179, 558
MflI RGATCY 1 cut(s) 2329
MhlI GDGCHC 3 cut(s) 1155, 2125, 2426
Mly113I GGCGCC 1 cut(s) 2270
MlyI GAGTC 4 cut(s) 469, 683, 805, 1585
MmeI TCCRAC 2 cut(s) 107, 782
Mph1103I ATGCAT 2 cut(s) 607, 1610
MroXI GAANNNNTTC 1 cut(s) 1684
MseI TTAA 9 cut(s) 527, 915, 942, 998, 1340, 1379, 1413, 1626, 1914
MslI CAYNNNNRTG 1 cut(s) 2163
MspA1I CMGCKG 1 cut(s) 1470
MspR9I CCNGG 8 cut(s) 694, 816, 848, 1005, 2064, 2149, 2401, 2420
MunI CAATTG 2 cut(s) 179, 558
Mva1269I GAATGC 2 cut(s) 900, 1705
MvaI CCWGG 8 cut(s) 694, 816, 848, 1005, 2064, 2149, 2401, 2420
MvnI CGCG 2 cut(s) 1359, 2285
MwoI GCNNNNNNNGC 7 cut(s) 44, 221, 1150, 1159, 1467, 2291, 2401
NarI GGCGCC 1 cut(s) 2270
NdeI CATATG 1 cut(s) 2276
NdeII GATC 9 cut(s) 66, 485, 494, 804, 1297, 1630, 1939, 2214, 2329
NlaIV GGNNCC 3 cut(s) 57, 2271, 2425
NmuCI GTSAC 4 cut(s) 202, 1261, 1597, 2362
NsiI ATGCAT 2 cut(s) 607, 1610
NspI RCATGY 2 cut(s) 1317, 2119
PaeR7I CTCGAG 1 cut(s) 1516
PagI TCATGA 4 cut(s) 682, 807, 2316, 2407
PaqCI CACCTGC 2 cut(s) 38, 707
PciI ACATGT 2 cut(s) 1313, 2115
PcsI WCGNNNNNNNCGW 1 cut(s) 490
PctI GAATGC 2 cut(s) 900, 1705
PdmI GAANNNNTTC 1 cut(s) 1684
PfeI GAWTC 2 cut(s) 1904, 2014
PflFI GACNNNGTC 1 cut(s) 878
PfoI TCCNGGA 2 cut(s) 692, 814
PkrI GCNGC 5 cut(s) 538, 636, 643, 2296, 2299
PleI GAGTC 4 cut(s) 468, 683, 805, 1584
PluTI GGCGCC 1 cut(s) 2273
PmaCI CACGTG 1 cut(s) 1715
PmlI CACGTG 1 cut(s) 1715
PpsI GAGTC 4 cut(s) 468, 683, 805, 1584
Ppu21I YACGTR 1 cut(s) 1715
PscI ACATGT 2 cut(s) 1313, 2115
PshBI ATTAAT 1 cut(s) 1626
Psp124BI GAGCTC 1 cut(s) 1155
Psp6I CCWGG 8 cut(s) 692, 814, 846, 1003, 2062, 2147, 2399, 2418
PspCI CACGTG 1 cut(s) 1715
PspFI CCCAGC 1 cut(s) 38
PspGI CCWGG 8 cut(s) 692, 814, 846, 1003, 2062, 2147, 2399, 2418
PspN4I GGNNCC 3 cut(s) 57, 2271, 2425
PspPI GGNCC 6 cut(s) 270, 389, 818, 1131, 1559, 2416
PstI CTGCAG 2 cut(s) 1036, 2299
PstNI CAGNNNCTG 2 cut(s) 224, 2069
PsuI RGATCY 1 cut(s) 2329
PsyI GACNNNGTC 1 cut(s) 878
RsaI GTAC 6 cut(s) 154, 666, 1405, 1637, 2237, 2248
RsaNI GTAC 6 cut(s) 153, 665, 1404, 1636, 2236, 2247
RseI CAYNNNNRTG 1 cut(s) 2163
SacI GAGCTC 1 cut(s) 1155
SalI GTCGAC 1 cut(s) 1835
SaqAI TTAA 9 cut(s) 527, 915, 942, 998, 1340, 1379, 1413, 1626, 1914
SatI GCNGC 5 cut(s) 537, 635, 642, 2295, 2298
Sau3AI GATC 9 cut(s) 66, 485, 494, 804, 1297, 1630, 1939, 2214, 2329
Sau96I GGNCC 6 cut(s) 270, 389, 818, 1131, 1559, 2416
SchI GAGTC 4 cut(s) 469, 683, 805, 1585
ScrFI CCNGG 8 cut(s) 694, 816, 848, 1005, 2064, 2149, 2401, 2420
SduI GDGCHC 3 cut(s) 1155, 2125, 2426
SfaNI GCATC 8 cut(s) 211, 592, 963, 1220, 1258, 1765, 2101, 2388
SfcI CTRYAG 3 cut(s) 1032, 1326, 2295
SfoI GGCGCC 1 cut(s) 2271
Sfr274I CTCGAG 1 cut(s) 1516
SinI GGWCC 3 cut(s) 389, 818, 2416
SlaI CTCGAG 1 cut(s) 1516
SmiMI CAYNNNNRTG 1 cut(s) 2163
SmlI CTYRAG 2 cut(s) 410, 1516
SmoI CTYRAG 2 cut(s) 410, 1516
SpeI ACTAGT 1 cut(s) 301
SsiI CCGC 4 cut(s) 92, 865, 1468, 1854
SspDI GGCGCC 1 cut(s) 2269
SspI AATATT 1 cut(s) 1981
SspMI CTAG 3 cut(s) 302, 1700, 1967
SstI GAGCTC 1 cut(s) 1155
StyD4I CCNGG 8 cut(s) 692, 814, 846, 1003, 2062, 2147, 2399, 2418
StyI CCWWGG 3 cut(s) 1562, 1966, 2096
TaiI ACGT 2 cut(s) 1717, 1864
TaqI TCGA 2 cut(s) 1517, 1836
TatI WGTACW 1 cut(s) 2246
TfiI GAWTC 2 cut(s) 1904, 2014
Tru1I TTAA 9 cut(s) 527, 915, 942, 998, 1340, 1379, 1413, 1626, 1914
Tru9I TTAA 9 cut(s) 527, 915, 942, 998, 1340, 1379, 1413, 1626, 1914
TscAI CASTG 8 cut(s) 211, 472, 1073, 1399, 1540, 1588, 1797, 2365
TseFI GTSAC 4 cut(s) 202, 1261, 1597, 2362
TseI GCWGC 5 cut(s) 536, 634, 641, 2294, 2297
Tsp45I GTSAC 4 cut(s) 202, 1261, 1597, 2362
TspDTI ATGAA 9 cut(s) 236, 671, 731, 1007, 1158, 2305, 2333, 2358, 2396
TspGWI ACGGA 1 cut(s) 743
TspRI CASTG 8 cut(s) 211, 472, 1073, 1399, 1540, 1588, 1797, 2365
Tth111I GACNNNGTC 1 cut(s) 878
VpaK11BI GGWCC 3 cut(s) 389, 818, 2416
VspI ATTAAT 1 cut(s) 1626
XagI CCTNNNNNAGG 1 cut(s) 1970
XapI RAATTY 2 cut(s) 938, 1684
XceI RCATGY 2 cut(s) 1317, 2119
XhoI CTCGAG 1 cut(s) 1516
XmaJI CCTAGG 1 cut(s) 1966
XmiI GTMKAC 3 cut(s) 380, 1181, 1836
XmnI GAANNNNTTC 1 cut(s) 1684
XspI CTAG 3 cut(s) 302, 1700, 1967
Zsp2I ATGCAT 2 cut(s) 607, 1610
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.