Prupe.3G209300_v2.0.a1

Belongs to the argonaute family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0001253
Physical Location & Seq
Reverse (-)
21498248 .. 21506995
8748 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G209300.1

Sequence Viewer

Length: 2697 bp
ATGGAGGATGTAGCTGGCCCTGGAAATGCCTGTGGGGACCCACATTCGTCCCCACCTCCTCCAACCATACCCCCTAATTTGAAGCCAGAACTAGTGGCTCCTCCTAAATATTCTATTATGAGTAGGTGTGGGACAGGAACTACTGGACAAACGATACCGTTGCTCGCAAACCACTTTAAAGTTTCTGTGAATGTTCCAGATGCTGTATTTTACCAGTATTTTGTTCGTATTACTTCAGAAGATAAGATAGCTGTTGAAGGCAAGGGAATTGGGAGAAAACTGATTGACAGGCTTTATCAAACATACTCTTCAGAACTTGGTGGTAAAAAGTTTGCATATGATGGGGACAAAGCTCTGTACATACTGGGTCCTCTGCCACAGAGAAGGCTTGAGTTTTCTGTTGTGCTGGAGGAGACATTTGCAAAGCATGAAAATGGGAATCCCCTGGCTGACAAACGGTCAAGACGTTCTTTTCGGTCAAAAACTTTCAACGTAGAAATAAGTTATGCTGCCGAAATACCTCTGAAGTCAATTGCTCTTGCCCTGAGAGGAGTGGATGTAGATAATACTCAGGATGCATTGAAAGTACTTGATATCATTCTGCGGCAGCAAGCAGCTAACAGGGGGTGTCTTCTAGTACGACAATCGTTCTTTCATGATGACTCCAGAAACTTTGTTGATGTTGGAGCAGGTGTAAAGGGTGTTCGGGGATTTCATTCCAGTTTCCGTCCAACACAGGATGGCTTGTCCTTGAATATGGATGTATCTACGACGATGATCCTAACGCCCGGACCTGTCATTGATTTTCTGATAACCAACCAGGATGTACGAGAAGCTCGCTACATTGATTGGGTTAAGGCCAAGAAAATGCTGAAAAATATGAGGATTAACGCAAGGCACCGTAACATGGAATTCAAAGTAATAGGCTTAAGTGAGAAACCCTGTAATCAACAATATTTCCCTATGAAGTTAAAAAGTGGCAATGGCACAAGTGAGGGTCAGACTGTGGAGATTACTGTGTATGAGTATTTTACTAAGCACTGTGGTGTAGAACTCACCTCTTCCCAATACATGCCATGCCTTGATGTTGGCAAGCCAAAAAGGCCCAACTATCTGCCACTGGAGCTCTGTTCGCTTGTTTCACTACAACGGTATACAAAGGCTTTATCTTCAACGCAGAGGGCATCCTTAGTTGAAAAATCAAGGCAGAAGCCTCATGAAAGAATACGAACTGTGACTGATGCAGTGAAAAAATACCAGTATGATGATGATCCTATGCTTGCTACATGTGGTATTTCTATAGAGAAGCAATTGACTCAAGTCAATGGCCGTGTTCTCGAGACTCCGAAGTTAAAGGTTGGTAACAGTGATGACTGCATCCCTCATAAGGGACGGTGGAATTTCAACAATAAGACACTTTTCAACCCTACTCGCATTGACCGTTGGCTTGTTGTCAACTTCTCTGCACGCTGTGATACTAGTCATATCTCACGGGAACTTATCAACTGTGGGAGGAAGAAGGGCATTTTTATTGAGCGTCCCTTTACATTACTTGAAGAAGATCCACAATGTAGAAGACAAAGCCCTGTTGCAAGAGTTGAAAAGATGTTCGAACAGATTCTAGCTAAGCTTCCAGGGGAACCTCAATTCATTCTTTGTGTCTTACCAGAGAGAAAAAATTGTGATATATATGGACCTTGGAAGAAAAAAAGTCTCAGTGAGTTCGGGATTGTCACACAATGCATTTCCCCTTCCAAGATTAATGATCAGTACCTGACAAATGTTCTTCTTAAGATCAATTCTAAGCTTGGAGGAATAAATTCTTTGTTGGCAATAGAGCACTCCTCATGTGTTCCTCTGGTTAATGATACTCCTACAATGATTCTGGGGATGGATGTCTCTCATGGGTCTCCTGGTCGCTCAGATATTCCTTCTGTTGCTGCGGTTGTTGGCTCTCGAAGTTGGCCGCTTATTTCTAGGTACAGAGCAGCTGTTAGAACACAATCTCCTAAGCTAGAGATGATTGATGCTCTGTACAAGCCACTTGAAAATGGAACTGATGCTGGTATTATCAGGGAACTGCTTGTGGACTTCTATAAAACAAGCAACGGACGTAAACCAACTCAGATTATTGTCTTCAGGGACGGAGTCAGCGAATCACAATTTAATCAAGTCTTGAACATCGAGCTGGACCAAATCATAAAGGCTTACCAGCACCTTGGGGAGGTTGATGTTCCAAAGTTTACTGTGATTGTTGCTCAGAAAAATCATCACACGAAGCTATTTCAAACCGGGGGTTCCACTGATAATGTTCCACCTGGGACAGTTGTGGACACAAATATTGTGCATCCAAGGAATTATGATTTCTACATGTGTGCTCATGCAGGAATGATTGGAACTTCGCGGCCAGCACACTATCATGTCCTGGTTGATGAGATTGGATTTTCTCCTGATGGCTTGCAAAACCTAATCCACTCCCTTTCTTACGTGTACCAAAGGAGTACAAGTGCAATCTCCATTGTGGCGCCCATATGTTATGCCCACCTTGCTGCTGCACAAGTGGGGCAGTTTATGAAGTTTGAAGATCTCTCAGAAACCTCATCAGGGAACGGCAGTGTCACTTCAGCTGAGAGTATCCCATTTCCAGAGCTCCCTAAGTTGCATAAGAATGTCCAGGGTTCCATGTTCTTCTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0034641 GO:0035194 GO:0035197 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061980 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

899

Amino Acids

100.25

Weight (kDa)

8.98

Isoelectric Point (pI)

38.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 680
Acc36I ACCTGC 1 cut(s) 680
AccB1I GGYRCC 2 cut(s) 897, 2524
AccI GTMKAC 1 cut(s) 1154
AccII CGCG 1 cut(s) 2404
AciI CCGC 4 cut(s) 604, 1943, 1967, 2404
AclWI GGATC 3 cut(s) 772, 1265, 1556
AcoI YGGCCR 3 cut(s) 1327, 1964, 2405
AcsI RAATTY 3 cut(s) 911, 1399, 1819
AcuI CTGAAG 5 cut(s) 219, 294, 545, 2122, 2607
AcyI GRCGYC 1 cut(s) 2525
AdeI CACNNNGTG 1 cut(s) 1472
AfaI GTAC 9 cut(s) 359, 588, 639, 828, 1772, 1982, 2036, 2492, 2503
AfiI CCNNNNNNNGG 5 cut(s) 907, 1387, 1388, 2224, 2604
AflII CTTAAG 2 cut(s) 928, 1790
AflIII ACRYGT 3 cut(s) 1286, 2370, 2487
AhdI GACNNNNNGTC 1 cut(s) 457
AhlI ACTAGT 2 cut(s) 91, 1478
AjnI CCWGG 8 cut(s) 19, 444, 819, 1633, 1912, 2317, 2424, 2673
AleI CACNNNNGTG 1 cut(s) 1044
AloI GAACNNNNNNTCC 2 cut(s) 1990, 2022
Alw21I GWGCWC 4 cut(s) 1128, 1842, 2380, 2652
Alw26I GTCTC 5 cut(s) 407, 1334, 1718, 1903, 1914
AlwI GGATC 3 cut(s) 772, 1265, 1556
AlwNI CAGNNNCTG 2 cut(s) 203, 1774
Ama87I CYCGRG 1 cut(s) 1337
AoxI GGCC 6 cut(s) 16, 858, 1103, 1327, 1964, 2405
ApeKI GCWGC 7 cut(s) 509, 607, 614, 1940, 1988, 2549, 2552
ApoI RAATTY 3 cut(s) 911, 1399, 1819
ArsI GACNNNNNNTTYG 2 cut(s) 456, 488
AseI ATTAAT 1 cut(s) 1761
Asp700I GAANNNNTTC 2 cut(s) 1617, 1819
AspLEI GCGC 1 cut(s) 2527
AspS9I GGNCC 7 cut(s) 17, 37, 368, 791, 1104, 1694, 2191
AsuC2I CCSGG 2 cut(s) 789, 2293
AsuHPI GGTGA 1 cut(s) 1048
AsuII TTCGAA 1 cut(s) 1611
AvaI CYCGRG 1 cut(s) 1337
AvaII GGWCC 5 cut(s) 37, 368, 791, 1694, 2191
BanI GGYRCC 2 cut(s) 897, 2524
BanII GRGCYC 2 cut(s) 1128, 2652
BbsI GAAGAC 3 cut(s) 623, 1582, 2128
Bbv12I GWGCWC 4 cut(s) 1128, 1842, 2380, 2652
BbvI GCAGC 7 cut(s) 496, 619, 626, 1927, 2000, 2536, 2539
BccI CCATC 4 cut(s) 335, 734, 1885, 2447
BceAI ACGGC 2 cut(s) 1314, 2626
BcgI CGANNNNNNTGC 2 cut(s) 142, 176
BciT130I CCWGG 8 cut(s) 21, 446, 821, 1635, 1914, 2319, 2426, 2675
BciVI GTATCC 1 cut(s) 2645
BclI TGATCA 1 cut(s) 1765
BcnI CCSGG 2 cut(s) 789, 2293
BcoDI GTCTC 5 cut(s) 407, 1334, 1718, 1903, 1914
BcuI ACTAGT 2 cut(s) 91, 1478
BfaI CTAG 6 cut(s) 92, 635, 1479, 1622, 1977, 2015
BfmI CTRYAG 1 cut(s) 1299
BfoI RGCGCY 1 cut(s) 2528
BfrI CTTAAG 2 cut(s) 928, 1790
BfuAI ACCTGC 1 cut(s) 680
BfuI GTATCC 1 cut(s) 2645
BglI GCCNNNNNGGC 1 cut(s) 1102
BglII AGATCT 1 cut(s) 2584
BlpI GCTNAGC 1 cut(s) 1626
BmcAI AGTACT 1 cut(s) 588
Bme18I GGWCC 5 cut(s) 37, 368, 791, 1694, 2191
BmeRI GACNNNNNGTC 1 cut(s) 457
BmeT110I CYCGRG 1 cut(s) 1337
BmgT120I GGNCC 7 cut(s) 17, 37, 368, 791, 1104, 1694, 2191
BmiI GGNNCC 9 cut(s) 38, 39, 99, 369, 899, 1641, 2299, 2526, 2680
BmrI ACTGGG 1 cut(s) 374
BmsI GCATC 8 cut(s) 190, 565, 1193, 1231, 1386, 2017, 2050, 2356
BmuI ACTGGG 1 cut(s) 374
BoxI GACNNNNGTC 1 cut(s) 1319
BpiI GAAGAC 3 cut(s) 623, 1582, 2128
BplI GAGNNNNNCTC 2 cut(s) 1829, 1861
BpmI CTGGAG 3 cut(s) 428, 649, 1142
Bpu10I CCTNAGC 1 cut(s) 2010
Bpu1102I GCTNAGC 1 cut(s) 1626
Bpu14I TTCGAA 1 cut(s) 1611
BpuEI CTTGAG 2 cut(s) 410, 1302
BpuMI CCSGG 2 cut(s) 789, 2293
BsaAI YACGTR 1 cut(s) 2488
BsaBI GATNNNNATC 1 cut(s) 1269
BsaHI GRCGYC 1 cut(s) 2525
BsaI GGTCTC 1 cut(s) 1914
BsaJI CCNNGG 9 cut(s) 19, 444, 1634, 1697, 2218, 2292, 2318, 2351, 2674
BsaXI ACNNNNNCTCC 8 cut(s) 543, 573, 678, 708, 1990, 2020, 2491, 2521
Bsc4I CCNNNNNNNGG 5 cut(s) 907, 1387, 1388, 2224, 2604
Bse1I ACTGG 6 cut(s) 148, 214, 369, 720, 1125, 1258
Bse3DI GCAATG 1 cut(s) 988
Bse8I GATNNNNATC 1 cut(s) 1269
BseBI CCWGG 8 cut(s) 21, 446, 821, 1635, 1914, 2319, 2426, 2675
BseDI CCNNGG 9 cut(s) 19, 444, 1634, 1697, 2218, 2292, 2318, 2351, 2674
BseJI GATNNNNATC 1 cut(s) 1269
BseLI CCNNNNNNNGG 5 cut(s) 907, 1387, 1388, 2224, 2604
BseMI GCAATG 1 cut(s) 988
BseMII CTCAG 8 cut(s) 536, 584, 1729, 1935, 2138, 2273, 2604, 2619
BseNI ACTGG 6 cut(s) 148, 214, 369, 720, 1125, 1258
BseRI GAGGAG 5 cut(s) 48, 90, 425, 564, 1834
BseXI GCAGC 7 cut(s) 496, 619, 626, 1927, 2000, 2536, 2539
BsgI GTGCAG 2 cut(s) 1449, 2538
Bsh1236I CGCG 1 cut(s) 2404
BshFI GGCC 6 cut(s) 18, 860, 1105, 1329, 1966, 2407
BshNI GGYRCC 2 cut(s) 897, 2524
BsiHKAI GWGCWC 4 cut(s) 1128, 1842, 2380, 2652
BsiHKCI CYCGRG 1 cut(s) 1337
BsiSI CCGG 2 cut(s) 789, 2292
BslFI GGGAC 8 cut(s) 34, 50, 145, 359, 1404, 1524, 2156, 2335
BslI CCNNNNNNNGG 5 cut(s) 907, 1387, 1388, 2224, 2604
BsmAI GTCTC 5 cut(s) 407, 1334, 1718, 1903, 1914
BsmFI GGGAC 8 cut(s) 34, 50, 145, 359, 1404, 1524, 2156, 2335
BsnI GGCC 6 cut(s) 18, 860, 1105, 1329, 1966, 2407
Bso31I GGTCTC 1 cut(s) 1914
BsoBI CYCGRG 1 cut(s) 1337
Bsp119I TTCGAA 1 cut(s) 1611
Bsp1286I GDGCHC 4 cut(s) 1128, 1842, 2380, 2652
Bsp1407I TGTACA 2 cut(s) 357, 2034
Bsp143I GATC 6 cut(s) 777, 1270, 1561, 1765, 1794, 2584
Bsp1720I GCTNAGC 1 cut(s) 1626
BspACI CCGC 4 cut(s) 604, 1943, 1967, 2404
BspANI GGCC 6 cut(s) 18, 860, 1105, 1329, 1966, 2407
BspCNI CTCAG 8 cut(s) 537, 583, 1728, 1934, 2137, 2272, 2603, 2620
BspFNI CGCG 1 cut(s) 2404
BspHI TCATGA 2 cut(s) 655, 1216
BspLI GGNNCC 9 cut(s) 38, 39, 99, 369, 899, 1641, 2299, 2526, 2680
BspMI ACCTGC 1 cut(s) 680
BspPI GGATC 3 cut(s) 772, 1265, 1556
BspT104I TTCGAA 1 cut(s) 1611
BspT107I GGYRCC 2 cut(s) 897, 2524
BspTI CTTAAG 2 cut(s) 928, 1790
BspTNI GGTCTC 1 cut(s) 1914
BsrDI GCAATG 1 cut(s) 988
BsrGI TGTACA 2 cut(s) 357, 2034
BsrI ACTGG 6 cut(s) 148, 214, 369, 720, 1125, 1258
BssECI CCNNGG 9 cut(s) 19, 444, 1634, 1697, 2218, 2292, 2318, 2351, 2674
BssMI GATC 6 cut(s) 777, 1270, 1561, 1765, 1794, 2584
BssNAI GTATAC 1 cut(s) 1155
BssNI GRCGYC 1 cut(s) 2525
BssT1I CCWWGG 3 cut(s) 1697, 2218, 2351
Bst1107I GTATAC 1 cut(s) 1155
Bst2UI CCWGG 8 cut(s) 21, 446, 821, 1635, 1914, 2319, 2426, 2675
Bst6I CTCTTC 2 cut(s) 313, 1066
BstACI GRCGYC 1 cut(s) 2525
BstAFI CTTAAG 2 cut(s) 928, 1790
BstAUI TGTACA 2 cut(s) 357, 2034
BstBAI YACGTR 1 cut(s) 2488
BstBI TTCGAA 1 cut(s) 1611
BstC8I GCNNGC 9 cut(s) 16, 165, 612, 838, 1094, 1281, 1468, 2409, 2459
BstENI CCTNNNNNAGG 1 cut(s) 2222
BstFNI CGCG 1 cut(s) 2404
BstH2I RGCGCY 1 cut(s) 2528
BstHHI GCGC 1 cut(s) 2527
BstKTI GATC 6 cut(s) 780, 1273, 1564, 1768, 1797, 2587
BstMAI GTCTC 5 cut(s) 407, 1334, 1718, 1903, 1914
BstMBI GATC 6 cut(s) 777, 1270, 1561, 1765, 1794, 2584
BstMWI GCNNNNNNNGC 4 cut(s) 1102, 1123, 1132, 2546
BstNI CCWGG 8 cut(s) 21, 446, 821, 1635, 1914, 2319, 2426, 2675
BstNSI RCATGY 3 cut(s) 1075, 1290, 2374
BstPAI GACNNNNGTC 1 cut(s) 1319
BstSFI CTRYAG 1 cut(s) 1299
BstUI CGCG 1 cut(s) 2404
BstV1I GCAGC 7 cut(s) 496, 619, 626, 1927, 2000, 2536, 2539
BstV2I GAAGAC 3 cut(s) 623, 1582, 2128
BstX2I RGATCY 2 cut(s) 1561, 2584
BstXI CCANNNNNNTGG 1 cut(s) 2219
BstYI RGATCY 2 cut(s) 1561, 2584
BstZ17I GTATAC 1 cut(s) 1155
BsuI GTATCC 1 cut(s) 2645
BsuRI GGCC 6 cut(s) 18, 860, 1105, 1329, 1966, 2407
BtsI GCAGTG 2 cut(s) 1251, 2620
BtsIMutI CAGTG 7 cut(s) 1039, 1118, 1251, 1372, 1723, 2301, 2620
BveI ACCTGC 1 cut(s) 680
Cac8I GCNNGC 9 cut(s) 16, 165, 612, 838, 1094, 1281, 1468, 2409, 2459
CaiI CAGNNNCTG 2 cut(s) 203, 1774
CciI TCATGA 2 cut(s) 655, 1216
CfoI GCGC 1 cut(s) 2527
Cfr13I GGNCC 7 cut(s) 17, 37, 368, 791, 1104, 1694, 2191
CseI GACGC 1 cut(s) 1526
Csp6I GTAC 9 cut(s) 358, 587, 638, 827, 1771, 1981, 2035, 2491, 2502
CviQI GTAC 9 cut(s) 358, 587, 638, 827, 1771, 1981, 2035, 2491, 2502
DinI GGCGCC 1 cut(s) 2526
DpnI GATC 6 cut(s) 779, 1272, 1563, 1767, 1796, 2586
DpnII GATC 6 cut(s) 777, 1270, 1561, 1765, 1794, 2584
DraI TTTAAA 1 cut(s) 178
DraIII CACNNNGTG 1 cut(s) 1472
DriI GACNNNNNGTC 1 cut(s) 457
EaeI YGGCCR 3 cut(s) 1327, 1964, 2405
Eam1104I CTCTTC 2 cut(s) 313, 1066
Eam1105I GACNNNNNGTC 1 cut(s) 457
EarI CTCTTC 2 cut(s) 313, 1066
Ecl136II GAGCTC 2 cut(s) 1126, 2650
Eco130I CCWWGG 3 cut(s) 1697, 2218, 2351
Eco24I GRGCYC 2 cut(s) 1128, 2652
Eco31I GGTCTC 1 cut(s) 1914
Eco32I GATATC 1 cut(s) 595
Eco47I GGWCC 5 cut(s) 37, 368, 791, 1694, 2191
Eco53kI GAGCTC 2 cut(s) 1126, 2650
Eco57I CTGAAG 5 cut(s) 219, 294, 545, 2122, 2607
Eco88I CYCGRG 1 cut(s) 1337
EcoICRI GAGCTC 2 cut(s) 1126, 2650
EcoNI CCTNNNNNAGG 1 cut(s) 2222
EcoO109I RGGNCCY 2 cut(s) 37, 368
EcoRI GAATTC 1 cut(s) 911
EcoRII CCWGG 8 cut(s) 19, 444, 819, 1633, 1912, 2317, 2424, 2673
EcoRV GATATC 1 cut(s) 595
EcoT14I CCWWGG 3 cut(s) 1697, 2218, 2351
EcoT22I ATGCAT 2 cut(s) 580, 1745
EcoT38I GRGCYC 2 cut(s) 1128, 2652
EgeI GGCGCC 1 cut(s) 2526
EheI GGCGCC 1 cut(s) 2526
ErhI CCWWGG 3 cut(s) 1697, 2218, 2351
FalI AAGNNNNNCTT 2 cut(s) 454, 486
FaqI GGGAC 8 cut(s) 34, 50, 145, 359, 1404, 1524, 2156, 2335
FauNDI CATATG 2 cut(s) 337, 2531
FbaI TGATCA 1 cut(s) 1765
FblI GTMKAC 1 cut(s) 1154
FriOI GRGCYC 2 cut(s) 1128, 2652
FspBI CTAG 6 cut(s) 92, 635, 1479, 1622, 1977, 2015
GlaI GCGC 1 cut(s) 2526
GsuI CTGGAG 3 cut(s) 428, 649, 1142
HaeII RGCGCY 1 cut(s) 2528
HaeIII GGCC 6 cut(s) 18, 860, 1105, 1329, 1966, 2407
HapII CCGG 2 cut(s) 789, 2292
HgaI GACGC 1 cut(s) 1526
HhaI GCGC 1 cut(s) 2527
Hin1I GRCGYC 1 cut(s) 2525
Hin6I GCGC 1 cut(s) 2525
HinP1I GCGC 1 cut(s) 2525
HincII GTYRAC 1 cut(s) 1456
HindII GTYRAC 1 cut(s) 1456
HindIII AAGCTT 2 cut(s) 1628, 1805
HinfI GANTC 8 cut(s) 439, 662, 1315, 1342, 1618, 1882, 2148, 2156
HpaII CCGG 2 cut(s) 789, 2292
HphI GGTGA 1 cut(s) 1048
Hpy166II GTNNAC 7 cut(s) 1155, 1456, 2089, 2117, 2244, 2332, 2491
Hpy8I GTNNAC 7 cut(s) 1155, 1456, 2089, 2117, 2244, 2332, 2491
Hpy99I CGWCG 1 cut(s) 775
HpyAV CCTTC 5 cut(s) 251, 378, 1513, 1761, 1941
HpyCH4IV ACGT 4 cut(s) 466, 492, 2113, 2487
HpyF10VI GCNNNNNNNGC 4 cut(s) 1102, 1123, 1132, 2546
HpySE526I ACGT 4 cut(s) 466, 492, 2113, 2487
Hsp92I GRCGYC 1 cut(s) 2525
HspAI GCGC 1 cut(s) 2525
KasI GGCGCC 1 cut(s) 2524
KflI GGGWCCC 1 cut(s) 37
Ksp22I TGATCA 1 cut(s) 1765
Kzo9I GATC 6 cut(s) 777, 1270, 1561, 1765, 1794, 2584
LmnI GCTCC 4 cut(s) 103, 686, 1123, 2655
Lsp1109I GCAGC 7 cut(s) 496, 619, 626, 1927, 2000, 2536, 2539
LweI GCATC 8 cut(s) 190, 565, 1193, 1231, 1386, 2017, 2050, 2356
MaeI CTAG 6 cut(s) 92, 635, 1479, 1622, 1977, 2015
MaeII ACGT 4 cut(s) 466, 492, 2113, 2487
MaeIII GTNAC 5 cut(s) 902, 1234, 1361, 1732, 2617
MalI GATC 6 cut(s) 779, 1272, 1563, 1767, 1796, 2586
MboI GATC 6 cut(s) 777, 1270, 1561, 1765, 1794, 2584
MfeI CAATTG 2 cut(s) 531, 1310
MflI RGATCY 2 cut(s) 1561, 2584
MhlI GDGCHC 4 cut(s) 1128, 1842, 2380, 2652
Mly113I GGCGCC 1 cut(s) 2525
MlyI GAGTC 4 cut(s) 656, 1309, 1336, 2157
MmeI TCCRAC 3 cut(s) 86, 664, 755
Mph1103I ATGCAT 2 cut(s) 580, 1745
MroXI GAANNNNTTC 2 cut(s) 1617, 1819
MslI CAYNNNNRTG 4 cut(s) 432, 1044, 2418, 2667
MspA1I CMGCKG 2 cut(s) 1991, 2627
MspCI CTTAAG 2 cut(s) 928, 1790
MspI CCGG 2 cut(s) 789, 2292
MunI CAATTG 2 cut(s) 531, 1310
MvaI CCWGG 8 cut(s) 21, 446, 821, 1635, 1914, 2319, 2426, 2675
MvnI CGCG 1 cut(s) 2404
MwoI GCNNNNNNNGC 4 cut(s) 1102, 1123, 1132, 2546
NarI GGCGCC 1 cut(s) 2525
NciI CCSGG 2 cut(s) 789, 2293
NdeI CATATG 2 cut(s) 337, 2531
NdeII GATC 6 cut(s) 777, 1270, 1561, 1765, 1794, 2584
NlaIV GGNNCC 9 cut(s) 38, 39, 99, 369, 899, 1641, 2299, 2526, 2680
NmuCI GTSAC 3 cut(s) 1234, 1732, 2617
NsiI ATGCAT 2 cut(s) 580, 1745
NspI RCATGY 3 cut(s) 1075, 1290, 2374
NspV TTCGAA 1 cut(s) 1611
OliI CACNNNNGTG 1 cut(s) 1044
PaeR7I CTCGAG 1 cut(s) 1337
PagI TCATGA 2 cut(s) 655, 1216
PaqCI CACCTGC 1 cut(s) 680
PciI ACATGT 2 cut(s) 1286, 2370
PcsI WCGNNNNNNNCGW 3 cut(s) 463, 1438, 2151
PdmI GAANNNNTTC 2 cut(s) 1617, 1819
PfeI GAWTC 4 cut(s) 439, 1618, 1882, 2156
PflFI GACNNNGTC 1 cut(s) 2147
PleI GAGTC 4 cut(s) 656, 1309, 1336, 2156
PluTI GGCGCC 1 cut(s) 2528
PpsI GAGTC 4 cut(s) 656, 1309, 1336, 2156
Ppu21I YACGTR 1 cut(s) 2488
PpuMI RGGWCCY 2 cut(s) 37, 368
PscI ACATGT 2 cut(s) 1286, 2370
PshAI GACNNNNGTC 1 cut(s) 1319
PshBI ATTAAT 1 cut(s) 1761
Psp124BI GAGCTC 2 cut(s) 1128, 2652
Psp5II RGGWCCY 2 cut(s) 37, 368
Psp6I CCWGG 8 cut(s) 19, 444, 819, 1633, 1912, 2317, 2424, 2673
PspGI CCWGG 8 cut(s) 19, 444, 819, 1633, 1912, 2317, 2424, 2673
PspN4I GGNNCC 9 cut(s) 38, 39, 99, 369, 899, 1641, 2299, 2526, 2680
PspPI GGNCC 7 cut(s) 17, 37, 368, 791, 1104, 1694, 2191
PspPPI RGGWCCY 2 cut(s) 37, 368
PsrI GAACNNNNNNTAC 2 cut(s) 687, 719
PstNI CAGNNNCTG 2 cut(s) 203, 1774
PsuI RGATCY 2 cut(s) 1561, 2584
PsyI GACNNNGTC 1 cut(s) 2147
PvuII CAGCTG 2 cut(s) 1991, 2627
RsaI GTAC 9 cut(s) 359, 588, 639, 828, 1772, 1982, 2036, 2492, 2503
RsaNI GTAC 9 cut(s) 358, 587, 638, 827, 1771, 1981, 2035, 2491, 2502
RseI CAYNNNNRTG 4 cut(s) 432, 1044, 2418, 2667
SacI GAGCTC 2 cut(s) 1128, 2652
Sau3AI GATC 6 cut(s) 777, 1270, 1561, 1765, 1794, 2584
Sau96I GGNCC 7 cut(s) 17, 37, 368, 791, 1104, 1694, 2191
ScaI AGTACT 1 cut(s) 588
SchI GAGTC 4 cut(s) 656, 1309, 1336, 2157
SduI GDGCHC 4 cut(s) 1128, 1842, 2380, 2652
SfaNI GCATC 8 cut(s) 190, 565, 1193, 1231, 1386, 2017, 2050, 2356
SfcI CTRYAG 1 cut(s) 1299
SfoI GGCGCC 1 cut(s) 2526
Sfr274I CTCGAG 1 cut(s) 1337
SfuI TTCGAA 1 cut(s) 1611
SinI GGWCC 5 cut(s) 37, 368, 791, 1694, 2191
SlaI CTCGAG 1 cut(s) 1337
SmiMI CAYNNNNRTG 4 cut(s) 432, 1044, 2418, 2667
SmlI CTYRAG 5 cut(s) 389, 928, 1317, 1337, 1790
SmoI CTYRAG 5 cut(s) 389, 928, 1317, 1337, 1790
SpeI ACTAGT 2 cut(s) 91, 1478
SsiI CCGC 4 cut(s) 604, 1943, 1967, 2404
SspDI GGCGCC 1 cut(s) 2524
SspI AATATT 3 cut(s) 110, 956, 2341
SspMI CTAG 6 cut(s) 92, 635, 1479, 1622, 1977, 2015
SstI GAGCTC 2 cut(s) 1128, 2652
StyI CCWWGG 3 cut(s) 1697, 2218, 2351
TaiI ACGT 4 cut(s) 469, 495, 2116, 2490
TaqI TCGA 4 cut(s) 1338, 1611, 1957, 2184
TaqII GACCGA 1 cut(s) 465
TatI WGTACW 4 cut(s) 357, 586, 2034, 2501
TauI GCSGC 3 cut(s) 607, 1969, 2407
TfiI GAWTC 4 cut(s) 439, 1618, 1882, 2156
TscAI CASTG 7 cut(s) 1046, 1125, 1251, 1372, 1723, 2308, 2620
TseFI GTSAC 3 cut(s) 1234, 1732, 2617
TseI GCWGC 7 cut(s) 509, 607, 614, 1940, 1988, 2549, 2552
Tsp45I GTSAC 3 cut(s) 1234, 1732, 2617
TspDTI ATGAA 7 cut(s) 444, 644, 704, 980, 1233, 1639, 2588
TspGWI ACGGA 3 cut(s) 716, 2124, 2160
TspRI CASTG 7 cut(s) 1046, 1125, 1251, 1372, 1723, 2308, 2620
Tth111I GACNNNGTC 1 cut(s) 2147
Vha464I CTTAAG 2 cut(s) 928, 1790
VpaK11BI GGWCC 5 cut(s) 37, 368, 791, 1694, 2191
VspI ATTAAT 1 cut(s) 1761
XagI CCTNNNNNAGG 1 cut(s) 2222
XapI RAATTY 3 cut(s) 911, 1399, 1819
XceI RCATGY 3 cut(s) 1075, 1290, 2374
XhoI CTCGAG 1 cut(s) 1337
XmiI GTMKAC 1 cut(s) 1154
XmnI GAANNNNTTC 2 cut(s) 1617, 1819
XspI CTAG 6 cut(s) 92, 635, 1479, 1622, 1977, 2015
ZrmI AGTACT 1 cut(s) 588
Zsp2I ATGCAT 2 cut(s) 580, 1745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.