Rh2AG530500

Belongs to the argonaute family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0001253
Physical Location & Seq
Reverse (-)
75914910 .. 75919814
4905 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG530500.1

Sequence Viewer

Length: 1914 bp
ATGACTCCTGGACCGGTAATAGATTTTCTGATTGCCAACCAGGGTGTGCGAGAACCCCGCAACATTGACTGGGTAAAGGCCAAGAGAATGCTGAAAAACATGAGGATTAAGACGAGACACCGTAACATGGAATTTAAAATAATAGGCATCAGCGAGAAGCCCTGCAATCTGCAATACTTTCCTATGAAGTTAAAGCCTGGTGATGGTGCAAGTGAAGGGGAGACTGCAGAGGTTACTGTGTTTGAGTATTTCACCAAACACTGTGGCATTGAACTCACTTACTCTGCATACCTGCCATGCCTTGATGTTGGCAAACCAAAAAGGCCCAACTATCTGCCTCTGGAGCTCTGTGCGCTTGTTTCATTACAACGGTATACGAAAGCATTATCTTCACAGCAGAGGGCATCCTTAGTTGAAAAATCAAGGCAGAAGCCTCAGGATAGAATACAAACTGTGACTGATGCTGTATGCAAATACCAGTATGATAGTGATCCTGTGCTTACTACATGTGGTATTTCTATAGAGAAGCAATTAACTCAGTTTGAAGGGCGCGTTCTTGATACTCCGAAGTTAAAGGTAGGTAACAGTGAGGATTGCACCCCTTTTAAGGGACGATGGAACTTCAACAACAAGACACTTTTGAACCCCACTCGCATTGACCGCTGGATTGTTGTCAACTTCTCTGCACGCTGTGATACCAGCCATATCTCGAGGGAGCTTATCAACAGTGGGAGGAAAAAGGGCATTCTTATTGAGCGTCCCTATACGCTGCTTGAGGAAGAACCACAGTCTAGAAGACAAAGCCCTGTTATAAGAGTTGAAAAGATGTTTGAACAAATTCAAACTAAGCTTCCAAGTCCACCTGACTTCATTCTTTGTGTTTTACCAGAGAGGAAAAATTCTGATATTTATGGGCCTTGGAAGAAAAAGAGTCTCAGTGATTTCGGTATTGTCACACAATGCATTTCCCCTTCCAAGATTAATGATCAGTACCTTACCAATGTGCTTCTGAAAATCAATTCTAAGCTTGGAGGAATAAATTCTTTGTTGGCGCTAGAGCATTCCTCACGTGTCCCTTTGATAAAAGATACTCCTACGATGATTTTGGGGATGGATGTATCTCATGGGTCTCCTGGTCGATCTGACATTCCTTCTGTTGCTGCCGTTGTAGGCTCTCGAAGTTGGCCACTTATTTCAAGGTACAGAGCAGCTGTTAGAACACAATCTCCTAAGGTGGAAATGATTGATGCTCTTTACAAGCCACTGGCAAATGGAAAAGATGATGGTATTATCAGGGAACTGCTTGTCGACTTCTATAAGACAAGCGGTGGACGTAAACCAACTCAGATTATTGTCTTCAGGGATGGAGTAAGTGAATCACAGTTTAATCAAGTCCTGAACATTGAGCTGGATCAAATCGTAAAGGCTTACCAGCACCTAGGGGAGGCTAATATTCCAAAGTTTACTGTGATTGTGGCTCAGAAGAATCATCACACAAAGCTATTCCAAACTAATTCCCCTGATAATGTTCCACCAGGGACTGTTGTTGACACCAAAATTGTGCATCCAAGGAATTATGATTTCTACATGTGTGCTCAGGCAGGCATGATTGGAACTTCCAGGCCAGCTCACTATCATGTCTTGCTTGATGAGATTGGCTTTTCCCCTGATGACTTGCAAAACCTGATCCACTCCCTTTCTTATGTGTACCAGAGAAGTACAACTGCAATCTCTATTGTGGCGCCAATATGCTACGCGCACCTTGCTGCAGCACAAGTGGGGCAGTTCATGAAGTTTGAAGATCTCTCGGACACCTCATCGGGGAAGGGCAGTGTCACTTCATCAGAGAGCATCCCAGTTCAAGAGCTTCCCAGGCTTCATGAGAAGGTCCAGGGCTCCATGTTCTTCTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0034641 GO:0035194 GO:0035197 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061980 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

637

Amino Acids

71.68

Weight (kDa)

9.12

Isoelectric Point (pI)

39.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAZ PF02170 7 - 137 1.1e-29 PAZ domain
ArgoL2 PF16488 147 - 192 1.3e-09 Argonaute linker 2 domain
Piwi PF02171 290 - 598 2e-107 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 812
Acc36I ACCTGC 1 cut(s) 300
AccB1I GGYRCC 1 cut(s) 1741
AccI GTMKAC 2 cut(s) 374, 1308
AccII CGCG 2 cut(s) 552, 1757
AciI CCGC 3 cut(s) 58, 661, 1326
AclWI GGATC 3 cut(s) 485, 1419, 1681
AcoI YGGCCR 1 cut(s) 1184
AcsI RAATTY 4 cut(s) 131, 837, 898, 1039
AcuI CTGAAG 1 cut(s) 1342
AcvI CACGTG 1 cut(s) 1070
AcyI GRCGYC 1 cut(s) 1742
AdeI CACNNNGTG 1 cut(s) 692
AfaI GTAC 4 cut(s) 992, 1202, 1709, 1720
AfiI CCNNNNNNNGG 6 cut(s) 127, 203, 607, 608, 1444, 1821
AflIII ACRYGT 3 cut(s) 506, 1069, 1587
AgeI ACCGGT 1 cut(s) 13
AjnI CCWGG 8 cut(s) 7, 39, 196, 1132, 1534, 1619, 1871, 1890
AloI GAACNNNNNNTCC 2 cut(s) 1210, 1242
AluBI AGCT 9 cut(s) 346, 718, 850, 1027, 1211, 1408, 1501, 1628, 1867
AluI AGCT 9 cut(s) 346, 718, 850, 1027, 1211, 1408, 1501, 1628, 1867
Alw21I GWGCWC 2 cut(s) 348, 1597
Alw26I GTCTC 4 cut(s) 109, 215, 938, 1134
AlwI GGATC 3 cut(s) 485, 1419, 1681
AlwNI CAGNNNCTG 1 cut(s) 1541
Ama87I CYCGRG 1 cut(s) 709
AoxI GGCC 5 cut(s) 78, 323, 914, 1184, 1622
ApeKI GCWGC 5 cut(s) 769, 1160, 1208, 1766, 1769
ApoI RAATTY 4 cut(s) 131, 837, 898, 1039
AseI ATTAAT 1 cut(s) 981
AsiGI ACCGGT 1 cut(s) 13
Asp700I GAANNNNTTC 2 cut(s) 837, 1039
AspA2I CCTAGG 1 cut(s) 1438
AspLEI GCGC 5 cut(s) 355, 552, 1054, 1744, 1759
AspS9I GGNCC 4 cut(s) 11, 324, 914, 1888
AsuHPI GGTGA 2 cut(s) 212, 244
AvaI CYCGRG 1 cut(s) 709
AvaII GGWCC 2 cut(s) 11, 1888
AvrII CCTAGG 1 cut(s) 1438
AxyI CCTNAGG 2 cut(s) 435, 1230
BalI TGGCCA 1 cut(s) 1186
BanI GGYRCC 1 cut(s) 1741
BanII GRGCYC 2 cut(s) 348, 1898
BbrPI CACGTG 1 cut(s) 1070
BbsI GAAGAC 2 cut(s) 802, 1348
Bbv12I GWGCWC 2 cut(s) 348, 1597
BbvI GCAGC 5 cut(s) 756, 1147, 1220, 1753, 1781
BccI CCATC 5 cut(s) 197, 609, 1105, 1277, 1358
BceAI ACGGC 1 cut(s) 1148
BciT130I CCWGG 8 cut(s) 9, 41, 198, 1134, 1536, 1621, 1873, 1892
BclI TGATCA 1 cut(s) 985
BcoDI GTCTC 4 cut(s) 109, 215, 938, 1134
BfaI CTAG 3 cut(s) 792, 1055, 1439
BfmI CTRYAG 3 cut(s) 225, 519, 1767
BfoI RGCGCY 2 cut(s) 1055, 1745
BfuAI ACCTGC 1 cut(s) 300
BglII AGATCT 1 cut(s) 1801
BisI GCNGC 5 cut(s) 770, 1161, 1209, 1767, 1770
BlnI CCTAGG 1 cut(s) 1438
BlsI GCNGC 5 cut(s) 771, 1162, 1210, 1768, 1771
Bme1390I CCNGG 8 cut(s) 9, 41, 198, 1134, 1536, 1621, 1873, 1892
Bme18I GGWCC 2 cut(s) 11, 1888
BmeT110I CYCGRG 1 cut(s) 709
BmgT120I GGNCC 4 cut(s) 11, 324, 914, 1888
BmiI GGNNCC 2 cut(s) 1743, 1897
BmrFI CCNGG 8 cut(s) 9, 41, 198, 1134, 1536, 1621, 1873, 1892
BmrI ACTGGG 2 cut(s) 79, 1850
BmsI GCATC 6 cut(s) 156, 413, 451, 1237, 1573, 1860
BmuI ACTGGG 2 cut(s) 79, 1850
BpiI GAAGAC 2 cut(s) 802, 1348
BplI GAGNNNNNCTC 2 cut(s) 1049, 1081
BpmI CTGGAG 1 cut(s) 362
Bpu10I CCTNAGC 1 cut(s) 1596
BpuEI CTTGAG 1 cut(s) 794
BsaAI YACGTR 1 cut(s) 1070
BsaBI GATNNNNATC 1 cut(s) 489
BsaHI GRCGYC 1 cut(s) 1742
BsaI GGTCTC 1 cut(s) 1134
BsaJI CCNNGG 7 cut(s) 40, 917, 1438, 1535, 1568, 1871, 1891
BsaWI WCCGGW 1 cut(s) 13
BsaXI ACNNNNNCTCC 2 cut(s) 1210, 1240
Bsc4I CCNNNNNNNGG 6 cut(s) 127, 203, 607, 608, 1444, 1821
Bse118I RCCGGY 1 cut(s) 13
Bse1I ACTGG 4 cut(s) 74, 478, 1269, 1856
Bse21I CCTNAGG 2 cut(s) 435, 1230
Bse8I GATNNNNATC 1 cut(s) 489
BseBI CCWGG 8 cut(s) 9, 41, 198, 1134, 1536, 1621, 1873, 1892
BseDI CCNNGG 7 cut(s) 40, 917, 1438, 1535, 1568, 1871, 1891
BseGI GGATG 6 cut(s) 404, 1116, 1120, 1369, 1564, 1851
BseJI GATNNNNATC 1 cut(s) 489
BseLI CCNNNNNNNGG 6 cut(s) 127, 203, 607, 608, 1444, 1821
BseMII CTCAG 6 cut(s) 449, 551, 949, 1358, 1493, 1610
BseNI ACTGG 4 cut(s) 74, 478, 1269, 1856
BseXI GCAGC 5 cut(s) 756, 1147, 1220, 1753, 1781
BsgI GTGCAG 1 cut(s) 669
Bsh1236I CGCG 2 cut(s) 552, 1757
BshFI GGCC 5 cut(s) 80, 325, 916, 1186, 1624
BshNI GGYRCC 1 cut(s) 1741
BshTI ACCGGT 1 cut(s) 13
BsiHKAI GWGCWC 2 cut(s) 348, 1597
BsiHKCI CYCGRG 1 cut(s) 709
BsiSI CCGG 1 cut(s) 14
BslFI GGGAC 4 cut(s) 624, 744, 1058, 1552
BslI CCNNNNNNNGG 6 cut(s) 127, 203, 607, 608, 1444, 1821
BsmAI GTCTC 4 cut(s) 109, 215, 938, 1134
BsmFI GGGAC 4 cut(s) 624, 744, 1058, 1552
BsmI GAATGC 3 cut(s) 93, 744, 1060
BsnI GGCC 5 cut(s) 80, 325, 916, 1186, 1624
Bso31I GGTCTC 1 cut(s) 1134
BsoBI CYCGRG 1 cut(s) 709
Bsp1286I GDGCHC 3 cut(s) 348, 1597, 1898
Bsp143I GATC 6 cut(s) 490, 985, 1139, 1411, 1686, 1801
BspACI CCGC 3 cut(s) 58, 661, 1326
BspANI GGCC 5 cut(s) 80, 325, 916, 1186, 1624
BspCNI CTCAG 6 cut(s) 448, 550, 948, 1357, 1492, 1609
BspFNI CGCG 2 cut(s) 552, 1757
BspHI TCATGA 2 cut(s) 1788, 1879
BspLI GGNNCC 2 cut(s) 1743, 1897
BspMAI CTGCAG 2 cut(s) 229, 1771
BspMI ACCTGC 1 cut(s) 300
BspPI GGATC 3 cut(s) 485, 1419, 1681
BspT107I GGYRCC 1 cut(s) 1741
BspTNI GGTCTC 1 cut(s) 1134
BsrFI RCCGGY 1 cut(s) 13
BsrI ACTGG 4 cut(s) 74, 478, 1269, 1856
BssAI RCCGGY 1 cut(s) 13
BssECI CCNNGG 7 cut(s) 40, 917, 1438, 1535, 1568, 1871, 1891
BssMI GATC 6 cut(s) 490, 985, 1139, 1411, 1686, 1801
BssNAI GTATAC 1 cut(s) 375
BssNI GRCGYC 1 cut(s) 1742
BssT1I CCWWGG 3 cut(s) 917, 1438, 1568
Bst1107I GTATAC 1 cut(s) 375
Bst2UI CCWGG 8 cut(s) 9, 41, 198, 1134, 1536, 1621, 1873, 1892
BstACI GRCGYC 1 cut(s) 1742
BstBAI YACGTR 1 cut(s) 1070
BstC8I GCNNGC 3 cut(s) 688, 1603, 1626
BstENI CCTNNNNNAGG 1 cut(s) 1442
BstF5I GGATG 6 cut(s) 404, 1116, 1120, 1369, 1564, 1851
BstFNI CGCG 2 cut(s) 552, 1757
BstH2I RGCGCY 2 cut(s) 1055, 1745
BstHHI GCGC 5 cut(s) 355, 552, 1054, 1744, 1759
BstKTI GATC 6 cut(s) 493, 988, 1142, 1414, 1689, 1804
BstMAI GTCTC 4 cut(s) 109, 215, 938, 1134
BstMBI GATC 6 cut(s) 490, 985, 1139, 1411, 1686, 1801
BstMWI GCNNNNNNNGC 5 cut(s) 343, 352, 660, 1763, 1873
BstNI CCWGG 8 cut(s) 9, 41, 198, 1134, 1536, 1621, 1873, 1892
BstNSI RCATGY 2 cut(s) 510, 1591
BstSCI CCNGG 8 cut(s) 7, 39, 196, 1132, 1534, 1619, 1871, 1890
BstSFI CTRYAG 3 cut(s) 225, 519, 1767
BstUI CGCG 2 cut(s) 552, 1757
BstV1I GCAGC 5 cut(s) 756, 1147, 1220, 1753, 1781
BstV2I GAAGAC 2 cut(s) 802, 1348
BstX2I RGATCY 1 cut(s) 1801
BstYI RGATCY 1 cut(s) 1801
BstZ17I GTATAC 1 cut(s) 375
Bsu36I CCTNAGG 2 cut(s) 435, 1230
BsuRI GGCC 5 cut(s) 80, 325, 916, 1186, 1624
BtsCI GGATG 6 cut(s) 404, 1116, 1120, 1369, 1564, 1851
BtsI GCAGTG 1 cut(s) 1837
BtsIMutI CAGTG 6 cut(s) 259, 592, 733, 943, 1262, 1837
BveI ACCTGC 1 cut(s) 300
Cac8I GCNNGC 3 cut(s) 688, 1603, 1626
CaiI CAGNNNCTG 1 cut(s) 1541
CciI TCATGA 2 cut(s) 1788, 1879
CfoI GCGC 5 cut(s) 355, 552, 1054, 1744, 1759
Cfr10I RCCGGY 1 cut(s) 13
Cfr13I GGNCC 4 cut(s) 11, 324, 914, 1888
CseI GACGC 1 cut(s) 746
Csp6I GTAC 4 cut(s) 991, 1201, 1708, 1719
CspAI ACCGGT 1 cut(s) 13
CspCI CAANNNNNGTGG 4 cut(s) 244, 279, 637, 672
CviQI GTAC 4 cut(s) 991, 1201, 1708, 1719
DinI GGCGCC 1 cut(s) 1743
DpnI GATC 6 cut(s) 492, 987, 1141, 1413, 1688, 1803
DpnII GATC 6 cut(s) 490, 985, 1139, 1411, 1686, 1801
DraI TTTAAA 1 cut(s) 136
DraIII CACNNNGTG 1 cut(s) 692
EaeI YGGCCR 1 cut(s) 1184
Ecl136II GAGCTC 1 cut(s) 346
Eco130I CCWWGG 3 cut(s) 917, 1438, 1568
Eco24I GRGCYC 2 cut(s) 348, 1898
Eco31I GGTCTC 1 cut(s) 1134
Eco47I GGWCC 2 cut(s) 11, 1888
Eco53kI GAGCTC 1 cut(s) 346
Eco57I CTGAAG 1 cut(s) 1342
Eco72I CACGTG 1 cut(s) 1070
Eco81I CCTNAGG 2 cut(s) 435, 1230
Eco88I CYCGRG 1 cut(s) 709
EcoICRI GAGCTC 1 cut(s) 346
EcoNI CCTNNNNNAGG 1 cut(s) 1442
EcoRII CCWGG 8 cut(s) 7, 39, 196, 1132, 1534, 1619, 1871, 1890
EcoT14I CCWWGG 3 cut(s) 917, 1438, 1568
EcoT22I ATGCAT 1 cut(s) 965
EcoT38I GRGCYC 2 cut(s) 348, 1898
EgeI GGCGCC 1 cut(s) 1743
EheI GGCGCC 1 cut(s) 1743
ErhI CCWWGG 3 cut(s) 917, 1438, 1568
FaqI GGGAC 4 cut(s) 624, 744, 1058, 1552
FauI CCCGC 1 cut(s) 65
FbaI TGATCA 1 cut(s) 985
FblI GTMKAC 2 cut(s) 374, 1308
Fnu4HI GCNGC 5 cut(s) 770, 1161, 1209, 1767, 1770
FokI GGATG 6 cut(s) 391, 1123, 1127, 1376, 1551, 1838
FriOI GRGCYC 2 cut(s) 348, 1898
Fsp4HI GCNGC 5 cut(s) 770, 1161, 1209, 1767, 1770
FspBI CTAG 3 cut(s) 792, 1055, 1439
GlaI GCGC 5 cut(s) 354, 551, 1053, 1743, 1758
GluI GCNGC 5 cut(s) 770, 1161, 1209, 1767, 1770
GsuI CTGGAG 1 cut(s) 362
HaeII RGCGCY 2 cut(s) 1055, 1745
HaeIII GGCC 5 cut(s) 80, 325, 916, 1186, 1624
HapII CCGG 1 cut(s) 14
HgaI GACGC 1 cut(s) 746
HhaI GCGC 5 cut(s) 355, 552, 1054, 1744, 1759
Hin1I GRCGYC 1 cut(s) 1742
Hin6I GCGC 5 cut(s) 353, 550, 1052, 1742, 1757
HinP1I GCGC 5 cut(s) 353, 550, 1052, 1742, 1757
HincII GTYRAC 3 cut(s) 676, 1309, 1549
HindII GTYRAC 3 cut(s) 676, 1309, 1549
HindIII AAGCTT 2 cut(s) 848, 1025
HinfI GANTC 4 cut(s) 4, 931, 1376, 1486
HpaII CCGG 1 cut(s) 14
HphI GGTGA 2 cut(s) 212, 244
Hpy166II GTNNAC 9 cut(s) 375, 676, 860, 1309, 1331, 1337, 1464, 1549, 1708
Hpy188I TCNGA 9 cut(s) 30, 567, 904, 1011, 1144, 1347, 1482, 1810, 1846
Hpy8I GTNNAC 9 cut(s) 375, 676, 860, 1309, 1331, 1337, 1464, 1549, 1708
HpyAV CCTTC 6 cut(s) 209, 539, 981, 1161, 1819, 1879
HpyCH4IV ACGT 2 cut(s) 1069, 1333
HpyF10VI GCNNNNNNNGC 5 cut(s) 343, 352, 660, 1763, 1873
HpySE526I ACGT 2 cut(s) 1069, 1333
Hsp92I GRCGYC 1 cut(s) 1742
HspAI GCGC 5 cut(s) 353, 550, 1052, 1742, 1757
KasI GGCGCC 1 cut(s) 1741
Ksp22I TGATCA 1 cut(s) 985
Kzo9I GATC 6 cut(s) 490, 985, 1139, 1411, 1686, 1801
LmnI GCTCC 3 cut(s) 343, 715, 1901
Lsp1109I GCAGC 5 cut(s) 756, 1147, 1220, 1753, 1781
LweI GCATC 6 cut(s) 156, 413, 451, 1237, 1573, 1860
MaeI CTAG 3 cut(s) 792, 1055, 1439
MaeII ACGT 2 cut(s) 1069, 1333
MaeIII GTNAC 6 cut(s) 122, 232, 454, 581, 952, 1834
MalI GATC 6 cut(s) 492, 987, 1141, 1413, 1688, 1803
MboI GATC 6 cut(s) 490, 985, 1139, 1411, 1686, 1801
MboII GAAGA 8 cut(s) 381, 791, 807, 934, 1348, 1495, 1811, 1897
MflI RGATCY 1 cut(s) 1801
MhlI GDGCHC 3 cut(s) 348, 1597, 1898
MlsI TGGCCA 1 cut(s) 1186
MluCI AATT 9 cut(s) 131, 530, 837, 898, 1018, 1039, 1513, 1557, 1573
MluNI TGGCCA 1 cut(s) 1186
Mly113I GGCGCC 1 cut(s) 1742
MlyI GAGTC 1 cut(s) 940
Mox20I TGGCCA 1 cut(s) 1186
Mph1103I ATGCAT 1 cut(s) 965
MroXI GAANNNNTTC 2 cut(s) 837, 1039
MscI TGGCCA 1 cut(s) 1186
MseI TTAA 8 cut(s) 108, 135, 191, 533, 572, 606, 981, 1386
MslI CAYNNNNRTG 1 cut(s) 1635
Msp20I TGGCCA 1 cut(s) 1186
MspA1I CMGCKG 2 cut(s) 663, 1211
MspI CCGG 1 cut(s) 14
MspR9I CCNGG 8 cut(s) 9, 41, 198, 1134, 1536, 1621, 1873, 1892
Mva1269I GAATGC 3 cut(s) 93, 744, 1060
MvaI CCWGG 8 cut(s) 9, 41, 198, 1134, 1536, 1621, 1873, 1892
MvnI CGCG 2 cut(s) 552, 1757
MwoI GCNNNNNNNGC 5 cut(s) 343, 352, 660, 1763, 1873
NarI GGCGCC 1 cut(s) 1742
NdeII GATC 6 cut(s) 490, 985, 1139, 1411, 1686, 1801
NlaIV GGNNCC 2 cut(s) 1743, 1897
NmuCI GTSAC 3 cut(s) 454, 952, 1834
NsiI ATGCAT 1 cut(s) 965
NspI RCATGY 2 cut(s) 510, 1591
PaeR7I CTCGAG 1 cut(s) 709
PagI TCATGA 2 cut(s) 1788, 1879
PciI ACATGT 2 cut(s) 506, 1587
PctI GAATGC 3 cut(s) 93, 744, 1060
PdmI GAANNNNTTC 2 cut(s) 837, 1039
PfeI GAWTC 2 cut(s) 1376, 1486
PfoI TCCNGGA 1 cut(s) 7
PinAI ACCGGT 1 cut(s) 13
PkrI GCNGC 5 cut(s) 771, 1162, 1210, 1768, 1771
PleI GAGTC 1 cut(s) 939
PluTI GGCGCC 1 cut(s) 1745
PmaCI CACGTG 1 cut(s) 1070
PmlI CACGTG 1 cut(s) 1070
PpsI GAGTC 1 cut(s) 939
Ppu21I YACGTR 1 cut(s) 1070
PscI ACATGT 2 cut(s) 506, 1587
PshBI ATTAAT 1 cut(s) 981
PsiI TTATAA 1 cut(s) 812
Psp124BI GAGCTC 1 cut(s) 348
Psp6I CCWGG 8 cut(s) 7, 39, 196, 1132, 1534, 1619, 1871, 1890
PspCI CACGTG 1 cut(s) 1070
PspGI CCWGG 8 cut(s) 7, 39, 196, 1132, 1534, 1619, 1871, 1890
PspN4I GGNNCC 2 cut(s) 1743, 1897
PspPI GGNCC 4 cut(s) 11, 324, 914, 1888
PstI CTGCAG 2 cut(s) 229, 1771
PstNI CAGNNNCTG 1 cut(s) 1541
PsuI RGATCY 1 cut(s) 1801
PvuII CAGCTG 1 cut(s) 1211
RsaI GTAC 4 cut(s) 992, 1202, 1709, 1720
RsaNI GTAC 4 cut(s) 991, 1201, 1708, 1719
RseI CAYNNNNRTG 1 cut(s) 1635
SacI GAGCTC 1 cut(s) 348
SalI GTCGAC 1 cut(s) 1307
SaqAI TTAA 8 cut(s) 108, 135, 191, 533, 572, 606, 981, 1386
SatI GCNGC 5 cut(s) 770, 1161, 1209, 1767, 1770
Sau3AI GATC 6 cut(s) 490, 985, 1139, 1411, 1686, 1801
Sau96I GGNCC 4 cut(s) 11, 324, 914, 1888
SchI GAGTC 1 cut(s) 940
ScrFI CCNGG 8 cut(s) 9, 41, 198, 1134, 1536, 1621, 1873, 1892
SduI GDGCHC 3 cut(s) 348, 1597, 1898
SfaNI GCATC 6 cut(s) 156, 413, 451, 1237, 1573, 1860
SfcI CTRYAG 3 cut(s) 225, 519, 1767
SfoI GGCGCC 1 cut(s) 1743
Sfr274I CTCGAG 1 cut(s) 709
SinI GGWCC 2 cut(s) 11, 1888
SlaI CTCGAG 1 cut(s) 709
SmiMI CAYNNNNRTG 1 cut(s) 1635
SmlI CTYRAG 2 cut(s) 709, 773
SmoI CTYRAG 2 cut(s) 709, 773
Sse9I AATT 9 cut(s) 131, 530, 837, 898, 1018, 1039, 1513, 1557, 1573
SsiI CCGC 3 cut(s) 58, 661, 1326
SspDI GGCGCC 1 cut(s) 1741
SspI AATATT 1 cut(s) 1453
SspMI CTAG 3 cut(s) 792, 1055, 1439
SstI GAGCTC 1 cut(s) 348
StyD4I CCNGG 8 cut(s) 7, 39, 196, 1132, 1534, 1619, 1871, 1890
StyI CCWWGG 3 cut(s) 917, 1438, 1568
TaiI ACGT 2 cut(s) 1072, 1336
TaqI TCGA 4 cut(s) 710, 1138, 1177, 1308
TasI AATT 9 cut(s) 131, 530, 837, 898, 1018, 1039, 1513, 1557, 1573
TatI WGTACW 1 cut(s) 1718
TfiI GAWTC 2 cut(s) 1376, 1486
Tru1I TTAA 8 cut(s) 108, 135, 191, 533, 572, 606, 981, 1386
Tru9I TTAA 8 cut(s) 108, 135, 191, 533, 572, 606, 981, 1386
TscAI CASTG 6 cut(s) 266, 592, 733, 943, 1269, 1837
TseFI GTSAC 3 cut(s) 454, 952, 1834
TseI GCWGC 5 cut(s) 769, 1160, 1208, 1766, 1769
Tsp45I GTSAC 3 cut(s) 454, 952, 1834
TspDTI ATGAA 7 cut(s) 200, 351, 859, 1777, 1805, 1830, 1868
TspRI CASTG 6 cut(s) 266, 592, 733, 943, 1269, 1837
VpaK11BI GGWCC 2 cut(s) 11, 1888
VspI ATTAAT 1 cut(s) 981
XagI CCTNNNNNAGG 1 cut(s) 1442
XapI RAATTY 4 cut(s) 131, 837, 898, 1039
XbaI TCTAGA 1 cut(s) 791
XceI RCATGY 2 cut(s) 510, 1591
XhoI CTCGAG 1 cut(s) 709
XmaJI CCTAGG 1 cut(s) 1438
XmiI GTMKAC 2 cut(s) 374, 1308
XmnI GAANNNNTTC 2 cut(s) 837, 1039
XspI CTAG 3 cut(s) 792, 1055, 1439
Zsp2I ATGCAT 1 cut(s) 965
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.