Rh2BG544700

Belongs to the argonaute family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0001253
Physical Location & Seq
Reverse (-)
75285022 .. 75288482
3461 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG544700.1

Sequence Viewer

Length: 2142 bp
ATGATGGTAGCTGGTGCCAAAAATGCAGGTGGGGACGCAGATTTGCCCCCACCCCCTCCAACCATACCATCCAATTTGAAGCCAGAACTATTGGCTCCGCCCAAGTATTCTATTATGACTAGGCCATGCAGGACTGGAACTACTGGACGGGGCATAACTTTGCTTGCCAACCACTTCAAAGTTTCAGTGAATAATCCAGATGCTGTATTTTATCAGTATTCTGTTCACATGACTTATGAAGATAATAATCCAGTTCTTCCAGGGATGGGAATTGGGAGAAAATTGATGGATAGGCTTTATCATACATACTCCATGGAATTTGATGGCAACAAATTTGCATACGATGGGGAGAAATCTCTGTACACATTTGGTCCTCTACCACTGCACAAGCTCAATTACACAGTTGTGCTGGAGGAATCAGTTTCTAGGCCACATGAAACCGGCAGCTCTAGTGTCACTGAAAAACGGATGAAACGATCTATTCAGTCAAAGACTTTCAATGTAGAGATAAGTTATGCTGCCAAAATACCTCTGAAGCCAATTGCTCTTGCCCTTAAAGGAGCTGATGCAGATGATGGTCAAGATGCATTGAGAGTGCTAGACATAGTCTTAAGGCAGCAAGCAGCTAACAGGGGATGTCTTCTAGTAAGACAGTCATTCTTTCAGGATGACTCCAGATGCATCACTGCTGTTGGAGGTACCGGTTTAAGTACTGTTCGGGGCTTCCATTCCAGTTTTCGTCCCACTCAGGGTGGTCTGACCTTGAATATGGATGTATCTACTACACTGATCTTAACCCCTGGACCAGTGATTGATTTTCTGAAAGCTAACCAGGGTGTACAACACCCCCGCAACATTGACTGGGCAAGGGCTAAAAGAATGCTGAAAAATTTGAGGATAAAGACAAGACATCACAACATGGAATTCAAAATTACTGGCTTGAGCCAGAATCCCTGCCGTGAGCAATATTTTCCTATGAAATTGAGAAGTGATGACGGAACTACTGTGGAGCAGACTGTGGACATTACTGTATATGAGTATTTCACCAAACATCGTGGCATAGAACTTACCTATTCTGCAAACTTTCCATGCCTTGACGTTGGCAAGCCAAAAAGGCCTAACTATGTGCCACTCGAGCTTTGTTCCCTTGTTTCCCTCCAACGGTATAAAAAAGCATTATCTTCAAAGCAGAGAGCTTCTATAGTTGGAAGTTCAAGGCAGAGGCCTCAGGAGAGAATAAATAGTGTGACTAATGCTGTAAGGAATTATGGCTATAATGATGATCCTGTGCTTGCTGCATGCGGTATATCCATAGAGAAGCAATTGACTCAGATTGAAGGTCGTGTACTTGAGGCTCCGAAGTTGAAGGTAGGCAACAGTTCCGATTGCATGCCTTCAGATGGGAGATGGAACTTCAATGGCAAGACATTTTTGAACCCCAAACACATTGACAAATGGATTGTTGTCAACTTCTCTTTGGAAAATTGTGATACTAGTCGCATCTCAAGGCAGCTTTATGACATTGGGAGGAAGAAGGGCATTAGAATTGAGTACCCAATCACATTGATTGAGGAACAACCACAGCTTAAAAAGCAAAGCCCTATTGAAAGAGTTAAAAAGATGTTTGAACAGATTAAAGTGAAGCATCCTACAGAGCCACCAAACTTCATTCTTTGCGTTTTACCAGAAAGAAAAACTTCTGATATATATGGACCGTGGAAGAAAGAGTGCCTTGTTGACTATGGCATTGTCACACAGTGCATTTCTCCTCCCATGAAAAAAAATAATAGGGAGAGAGAGCTATCTGAACAGTACTTCACTAATGTACTTTTGAAAATCAATTCTAAGCTTGGAGGAATAAATTCTTTGTTGGCAACAGAACACTCTGGGGTTGTTTCTCTAATTAAAGATACTCCTACAATGATTTTGGGGATGGATGTATCTCATGGGCCTCCTGGTCGATCAGATATTCCTTCTGTTGCTGCGGTTGTTGGCTCTCTACAGTGGCCACTAATTTCACAGTACAGAGCGGCTGTAAGGACACAAAAAGTTCGTAAGGAGATGATTGATTCTCTGTACAAGCCACTGGAAAGTGGAGAAGATGATGGTATTATGAGGTATATAATGAAACCAGGCATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0034641 GO:0035194 GO:0035197 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061980 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

713

Amino Acids

79.98

Weight (kDa)

9.42

Isoelectric Point (pI)

38.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgoN PF16486 51 - 204 1.6e-25 N-terminal domain of argonaute
ArgoL1 PF08699 216 - 264 3.4e-14 Argonaute linker 1 domain
PAZ PF02170 271 - 401 5.6e-32 PAZ domain
ArgoL2 PF16488 411 - 456 1.1e-14 Argonaute linker 2 domain
ArgoMid PF16487 464 - 545 1.1e-06 Mid domain of argonaute
Piwi PF02171 556 - 694 1.4e-31 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 17
Acc36I ACCTGC 1 cut(s) 17
Acc65I GGTACC 1 cut(s) 698
AccB1I GGYRCC 2 cut(s) 14, 698
AccBSI CCGCTC 1 cut(s) 2030
AciI CCGC 5 cut(s) 98, 850, 1302, 1985, 2030
AclWI GGATC 1 cut(s) 1277
AcoI YGGCCR 1 cut(s) 2006
AcsI RAATTY 5 cut(s) 317, 332, 889, 923, 1861
AcuI CTGAAG 2 cut(s) 554, 1380
AdeI CACNNNGTG 1 cut(s) 1758
AfiI CCNNNNNNNGG 4 cut(s) 266, 749, 1161, 1400
AflII CTTAAG 1 cut(s) 610
AgeI ACCGGT 1 cut(s) 701
AhlI ACTAGT 1 cut(s) 1493
AjnI CCWGG 5 cut(s) 259, 799, 831, 1954, 2131
AleI CACNNNNGTG 1 cut(s) 404
AlwI GGATC 1 cut(s) 1277
AlwNI CAGNNNCTG 1 cut(s) 203
Ama87I CYCGRG 1 cut(s) 1133
AoxI GGCC 6 cut(s) 122, 428, 1115, 1223, 1949, 2006
ApeKI GCWGC 7 cut(s) 444, 518, 616, 623, 1295, 1510, 1982
ApoI RAATTY 5 cut(s) 317, 332, 889, 923, 1861
AsiGI ACCGGT 1 cut(s) 701
Asp700I GAANNNNTTC 2 cut(s) 1696, 1861
Asp718I GGTACC 1 cut(s) 698
AspS9I GGNCC 4 cut(s) 371, 803, 1712, 1949
AsuHPI GGTGA 1 cut(s) 1036
AvaI CYCGRG 1 cut(s) 1133
AvaII GGWCC 3 cut(s) 371, 803, 1712
AxyI CCTNAGG 1 cut(s) 1227
BalI TGGCCA 1 cut(s) 2008
BanI GGYRCC 2 cut(s) 14, 698
BarI GAAGNNNNNNTAC 2 cut(s) 1329, 1361
BbsI GAAGAC 1 cut(s) 632
BbvI GCAGC 7 cut(s) 456, 505, 628, 635, 1282, 1522, 1969
BceAI ACGGC 1 cut(s) 942
BciT130I CCWGG 5 cut(s) 261, 801, 833, 1956, 2133
BcuI ACTAGT 1 cut(s) 1493
BfaI CTAG 6 cut(s) 120, 426, 450, 599, 644, 1494
BfmI CTRYAG 3 cut(s) 1200, 1650, 2000
BfrI CTTAAG 1 cut(s) 610
BfuAI ACCTGC 1 cut(s) 17
BglI GCCNNNNNGGC 1 cut(s) 1114
BisI GCNGC 8 cut(s) 445, 519, 617, 624, 1296, 1511, 1983, 2031
BlsI GCNGC 8 cut(s) 446, 520, 618, 625, 1297, 1512, 1984, 2032
BmcAI AGTACT 2 cut(s) 712, 1814
Bme1390I CCNGG 5 cut(s) 261, 801, 833, 1956, 2133
Bme18I GGWCC 3 cut(s) 371, 803, 1712
BmeT110I CYCGRG 1 cut(s) 1133
BmgT120I GGNCC 4 cut(s) 371, 803, 1712, 1949
BmiI GGNNCC 4 cut(s) 16, 96, 700, 1356
BmrFI CCNGG 5 cut(s) 261, 801, 833, 1956, 2133
BmrI ACTGGG 1 cut(s) 871
BmsI GCATC 7 cut(s) 190, 556, 574, 668, 690, 1509, 1654
BmuI ACTGGG 1 cut(s) 871
BpiI GAAGAC 1 cut(s) 632
BpmI CTGGAG 2 cut(s) 431, 658
BpuEI CTTGAG 3 cut(s) 961, 1370, 1489
BsaBI GATNNNNATC 1 cut(s) 246
BsaJI CCNNGG 5 cut(s) 260, 312, 799, 832, 1715
BsaWI WCCGGW 1 cut(s) 701
Bsc4I CCNNNNNNNGG 4 cut(s) 266, 749, 1161, 1400
Bse118I RCCGGY 2 cut(s) 440, 701
Bse1I ACTGG 8 cut(s) 139, 148, 251, 732, 806, 866, 940, 2091
Bse21I CCTNAGG 1 cut(s) 1227
Bse8I GATNNNNATC 1 cut(s) 246
BseBI CCWGG 5 cut(s) 261, 801, 833, 1956, 2133
BseDI CCNNGG 5 cut(s) 260, 312, 799, 832, 1715
BseGI GGATG 9 cut(s) 68, 270, 474, 641, 673, 778, 1645, 1938, 1942
BseJI GATNNNNATC 1 cut(s) 246
BseLI CCNNNNNNNGG 4 cut(s) 266, 749, 1161, 1400
BseMII CTCAG 3 cut(s) 761, 1241, 1343
BseNI ACTGG 8 cut(s) 139, 148, 251, 732, 806, 866, 940, 2091
BseRI GAGGAG 1 cut(s) 1758
BseXI GCAGC 7 cut(s) 456, 505, 628, 635, 1282, 1522, 1969
BsgI GTGCAG 1 cut(s) 368
BshFI GGCC 6 cut(s) 124, 430, 1117, 1225, 1951, 2008
BshNI GGYRCC 2 cut(s) 14, 698
BshTI ACCGGT 1 cut(s) 701
BsiHKCI CYCGRG 1 cut(s) 1133
BsiSI CCGG 2 cut(s) 441, 702
BslFI GGGAC 2 cut(s) 47, 726
BslI CCNNNNNNNGG 4 cut(s) 266, 749, 1161, 1400
BsmFI GGGAC 2 cut(s) 47, 726
BsmI GAATGC 1 cut(s) 885
BsnI GGCC 6 cut(s) 124, 430, 1117, 1225, 1951, 2008
BsoBI CYCGRG 1 cut(s) 1133
Bsp1407I TGTACA 3 cut(s) 360, 838, 2076
Bsp143I GATC 4 cut(s) 476, 789, 1282, 1961
Bsp19I CCATGG 1 cut(s) 312
BspACI CCGC 5 cut(s) 98, 850, 1302, 1985, 2030
BspANI GGCC 6 cut(s) 124, 430, 1117, 1225, 1951, 2008
BspCNI CTCAG 3 cut(s) 760, 1240, 1342
BspLI GGNNCC 4 cut(s) 16, 96, 700, 1356
BspMI ACCTGC 1 cut(s) 17
BspPI GGATC 1 cut(s) 1277
BspT107I GGYRCC 2 cut(s) 14, 698
BspTI CTTAAG 1 cut(s) 610
BsrBI CCGCTC 1 cut(s) 2030
BsrFI RCCGGY 2 cut(s) 440, 701
BsrGI TGTACA 3 cut(s) 360, 838, 2076
BsrI ACTGG 8 cut(s) 139, 148, 251, 732, 806, 866, 940, 2091
BssAI RCCGGY 2 cut(s) 440, 701
BssECI CCNNGG 5 cut(s) 260, 312, 799, 832, 1715
BssMI GATC 4 cut(s) 476, 789, 1282, 1961
BssT1I CCWWGG 1 cut(s) 312
Bst2UI CCWGG 5 cut(s) 261, 801, 833, 1956, 2133
BstAFI CTTAAG 1 cut(s) 610
BstAUI TGTACA 3 cut(s) 360, 838, 2076
BstC8I GCNNGC 6 cut(s) 165, 621, 1106, 1293, 1300, 1391
BstDEI CTNAG 4 cut(s) 747, 1227, 1329, 1845
BstDSI CCRYGG 2 cut(s) 312, 1715
BstF5I GGATG 9 cut(s) 68, 270, 474, 641, 673, 778, 1645, 1938, 1942
BstKTI GATC 4 cut(s) 479, 792, 1285, 1964
BstMBI GATC 4 cut(s) 476, 789, 1282, 1961
BstMWI GCNNNNNNNGC 4 cut(s) 23, 1114, 1135, 1591
BstNI CCWGG 5 cut(s) 261, 801, 833, 1956, 2133
BstNSI RCATGY 2 cut(s) 1302, 1393
BstSCI CCNGG 5 cut(s) 259, 799, 831, 1954, 2131
BstSFI CTRYAG 3 cut(s) 1200, 1650, 2000
BstV1I GCAGC 7 cut(s) 456, 505, 628, 635, 1282, 1522, 1969
BstV2I GAAGAC 1 cut(s) 632
Bsu36I CCTNAGG 1 cut(s) 1227
BsuRI GGCC 6 cut(s) 124, 430, 1117, 1225, 1951, 2008
BtgI CCRYGG 2 cut(s) 312, 1715
BtsCI GGATG 9 cut(s) 68, 270, 474, 641, 673, 778, 1645, 1938, 1942
BtsI GCAGTG 2 cut(s) 380, 684
BtsIMutI CAGTG 9 cut(s) 192, 380, 456, 684, 785, 813, 1763, 2009, 2084
BveI ACCTGC 1 cut(s) 17
Cac8I GCNNGC 6 cut(s) 165, 621, 1106, 1293, 1300, 1391
CaiI CAGNNNCTG 1 cut(s) 203
Cfr10I RCCGGY 2 cut(s) 440, 701
Cfr13I GGNCC 4 cut(s) 371, 803, 1712, 1949
CseI GACGC 1 cut(s) 44
CspAI ACCGGT 1 cut(s) 701
CspCI CAANNNNNGTGG 2 cut(s) 1036, 1071
DdeI CTNAG 4 cut(s) 747, 1227, 1329, 1845
DpnI GATC 4 cut(s) 478, 791, 1284, 1963
DpnII GATC 4 cut(s) 476, 789, 1282, 1961
DraIII CACNNNGTG 1 cut(s) 1758
EaeI YGGCCR 1 cut(s) 2006
EciI GGCGGA 1 cut(s) 87
Eco130I CCWWGG 1 cut(s) 312
Eco147I AGGCCT 2 cut(s) 1117, 1225
Eco47I GGWCC 3 cut(s) 371, 803, 1712
Eco57I CTGAAG 2 cut(s) 554, 1380
Eco81I CCTNAGG 1 cut(s) 1227
Eco88I CYCGRG 1 cut(s) 1133
EcoRI GAATTC 1 cut(s) 923
EcoRII CCWGG 5 cut(s) 259, 799, 831, 1954, 2131
EcoT14I CCWWGG 1 cut(s) 312
EcoT22I ATGCAT 2 cut(s) 589, 683
ErhI CCWWGG 1 cut(s) 312
FalI AAGNNNNNCTT 4 cut(s) 1681, 1713, 1716, 1748
FaqI GGGAC 2 cut(s) 47, 726
FauI CCCGC 1 cut(s) 857
Fnu4HI GCNGC 8 cut(s) 445, 519, 617, 624, 1296, 1511, 1983, 2031
FokI GGATG 9 cut(s) 55, 277, 481, 648, 680, 785, 1632, 1945, 1949
Fsp4HI GCNGC 8 cut(s) 445, 519, 617, 624, 1296, 1511, 1983, 2031
FspBI CTAG 6 cut(s) 120, 426, 450, 599, 644, 1494
GluI GCNGC 8 cut(s) 445, 519, 617, 624, 1296, 1511, 1983, 2031
GsuI CTGGAG 2 cut(s) 431, 658
HaeIII GGCC 6 cut(s) 124, 430, 1117, 1225, 1951, 2008
HapII CCGG 2 cut(s) 441, 702
HgaI GACGC 1 cut(s) 44
HincII GTYRAC 2 cut(s) 1468, 1738
HindII GTYRAC 2 cut(s) 1468, 1738
HindIII AAGCTT 1 cut(s) 1847
HinfI GANTC 5 cut(s) 416, 671, 949, 1327, 2069
HpaII CCGG 2 cut(s) 441, 702
HphI GGTGA 1 cut(s) 1036
Hpy166II GTNNAC 7 cut(s) 226, 363, 839, 1021, 1346, 1468, 1738
Hpy188III TCNNGA 5 cut(s) 197, 581, 665, 675, 1229
Hpy8I GTNNAC 7 cut(s) 226, 363, 839, 1021, 1346, 1468, 1738
HpyAV CCTTC 5 cut(s) 1331, 1360, 1404, 1528, 1983
HpyCH4IV ACGT 1 cut(s) 1098
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 1114, 1135, 1591
HpyF3I CTNAG 4 cut(s) 747, 1227, 1329, 1845
HpySE526I ACGT 1 cut(s) 1098
KpnI GGTACC 1 cut(s) 702
Kzo9I GATC 4 cut(s) 476, 789, 1282, 1961
LmnI GCTCC 4 cut(s) 100, 560, 1009, 1360
Lsp1109I GCAGC 7 cut(s) 456, 505, 628, 635, 1282, 1522, 1969
LweI GCATC 7 cut(s) 190, 556, 574, 668, 690, 1509, 1654
MaeI CTAG 6 cut(s) 120, 426, 450, 599, 644, 1494
MaeII ACGT 1 cut(s) 1098
MaeIII GTNAC 3 cut(s) 454, 1246, 1750
MalI GATC 4 cut(s) 478, 791, 1284, 1963
MbiI CCGCTC 1 cut(s) 2030
MboI GATC 4 cut(s) 476, 789, 1282, 1961
MboII GAAGA 7 cut(s) 248, 251, 632, 1173, 1543, 1732, 2111
MfeI CAATTG 2 cut(s) 540, 1322
MlsI TGGCCA 1 cut(s) 2008
MluNI TGGCCA 1 cut(s) 2008
MlyI GAGTC 2 cut(s) 665, 1321
MmeI TCCRAC 4 cut(s) 83, 673, 1183, 1186
Mox20I TGGCCA 1 cut(s) 2008
Mph1103I ATGCAT 2 cut(s) 589, 683
MroXI GAANNNNTTC 2 cut(s) 1696, 1861
MscI TGGCCA 1 cut(s) 2008
MseI TTAA 8 cut(s) 555, 611, 707, 794, 1587, 1614, 1635, 1905
MslI CAYNNNNRTG 1 cut(s) 404
Msp20I TGGCCA 1 cut(s) 2008
MspCI CTTAAG 1 cut(s) 610
MspI CCGG 2 cut(s) 441, 702
MspR9I CCNGG 5 cut(s) 261, 801, 833, 1956, 2133
MunI CAATTG 2 cut(s) 540, 1322
Mva1269I GAATGC 1 cut(s) 885
MvaI CCWGG 5 cut(s) 261, 801, 833, 1956, 2133
MwoI GCNNNNNNNGC 4 cut(s) 23, 1114, 1135, 1591
NcoI CCATGG 1 cut(s) 312
NdeII GATC 4 cut(s) 476, 789, 1282, 1961
NlaIV GGNNCC 4 cut(s) 16, 96, 700, 1356
NmuCI GTSAC 3 cut(s) 454, 1246, 1750
NsiI ATGCAT 2 cut(s) 589, 683
NspI RCATGY 2 cut(s) 1302, 1393
OliI CACNNNNGTG 1 cut(s) 404
PaeI GCATGC 2 cut(s) 1302, 1393
PaeR7I CTCGAG 1 cut(s) 1133
PaqCI CACCTGC 1 cut(s) 17
PceI AGGCCT 2 cut(s) 1117, 1225
PcsI WCGNNNNNNNCGW 1 cut(s) 472
PctI GAATGC 1 cut(s) 885
PdmI GAANNNNTTC 2 cut(s) 1696, 1861
PfeI GAWTC 3 cut(s) 416, 949, 2069
PflFI GACNNNGTC 1 cut(s) 605
PinAI ACCGGT 1 cut(s) 701
PkrI GCNGC 8 cut(s) 446, 520, 618, 625, 1297, 1512, 1984, 2032
PleI GAGTC 2 cut(s) 665, 1321
PpsI GAGTC 2 cut(s) 665, 1321
Psp6I CCWGG 5 cut(s) 259, 799, 831, 1954, 2131
PspGI CCWGG 5 cut(s) 259, 799, 831, 1954, 2131
PspN4I GGNNCC 4 cut(s) 16, 96, 700, 1356
PspPI GGNCC 4 cut(s) 371, 803, 1712, 1949
PspXI VCTCGAGB 1 cut(s) 1133
PstNI CAGNNNCTG 1 cut(s) 203
PsyI GACNNNGTC 1 cut(s) 605
RseI CAYNNNNRTG 1 cut(s) 404
SaqAI TTAA 8 cut(s) 555, 611, 707, 794, 1587, 1614, 1635, 1905
SatI GCNGC 8 cut(s) 445, 519, 617, 624, 1296, 1511, 1983, 2031
Sau3AI GATC 4 cut(s) 476, 789, 1282, 1961
Sau96I GGNCC 4 cut(s) 371, 803, 1712, 1949
ScaI AGTACT 2 cut(s) 712, 1814
SchI GAGTC 2 cut(s) 665, 1321
ScrFI CCNGG 5 cut(s) 261, 801, 833, 1956, 2133
SfaNI GCATC 7 cut(s) 190, 556, 574, 668, 690, 1509, 1654
SfcI CTRYAG 3 cut(s) 1200, 1650, 2000
Sfr274I CTCGAG 1 cut(s) 1133
SinI GGWCC 3 cut(s) 371, 803, 1712
SlaI CTCGAG 1 cut(s) 1133
SmiMI CAYNNNNRTG 1 cut(s) 404
SmlI CTYRAG 5 cut(s) 610, 940, 1133, 1349, 1504
SmoI CTYRAG 5 cut(s) 610, 940, 1133, 1349, 1504
SpeI ACTAGT 1 cut(s) 1493
SphI GCATGC 2 cut(s) 1302, 1393
SseBI AGGCCT 2 cut(s) 1117, 1225
SsiI CCGC 5 cut(s) 98, 850, 1302, 1985, 2030
SspI AATATT 1 cut(s) 968
SspMI CTAG 6 cut(s) 120, 426, 450, 599, 644, 1494
StuI AGGCCT 2 cut(s) 1117, 1225
StyD4I CCNGG 5 cut(s) 259, 799, 831, 1954, 2131
StyI CCWWGG 1 cut(s) 312
TaiI ACGT 1 cut(s) 1101
TaqI TCGA 2 cut(s) 1134, 1960
TatI WGTACW 8 cut(s) 360, 710, 838, 1345, 1812, 1825, 2022, 2076
TauI GCSGC 1 cut(s) 2033
TfiI GAWTC 3 cut(s) 416, 949, 2069
Tru1I TTAA 8 cut(s) 555, 611, 707, 794, 1587, 1614, 1635, 1905
Tru9I TTAA 8 cut(s) 555, 611, 707, 794, 1587, 1614, 1635, 1905
TscAI CASTG 9 cut(s) 192, 387, 463, 691, 792, 813, 1763, 2009, 2091
TseFI GTSAC 3 cut(s) 454, 1246, 1750
TseI GCWGC 7 cut(s) 444, 518, 616, 623, 1295, 1510, 1982
Tsp45I GTSAC 3 cut(s) 454, 1246, 1750
TspDTI ATGAA 7 cut(s) 252, 450, 485, 992, 1657, 1790, 2141
TspGWI ACGGA 2 cut(s) 481, 1011
TspRI CASTG 9 cut(s) 192, 387, 463, 691, 792, 813, 1763, 2009, 2091
Tth111I GACNNNGTC 1 cut(s) 605
Vha464I CTTAAG 1 cut(s) 610
VpaK11BI GGWCC 3 cut(s) 371, 803, 1712
XapI RAATTY 5 cut(s) 317, 332, 889, 923, 1861
XceI RCATGY 2 cut(s) 1302, 1393
XhoI CTCGAG 1 cut(s) 1133
XmnI GAANNNNTTC 2 cut(s) 1696, 1861
XspI CTAG 6 cut(s) 120, 426, 450, 599, 644, 1494
ZrmI AGTACT 2 cut(s) 712, 1814
Zsp2I ATGCAT 2 cut(s) 589, 683
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.