Rh2CG514900

Belongs to the argonaute family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0001253
Physical Location & Seq
Reverse (-)
68883407 .. 68890444
7038 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG514900.1

Sequence Viewer

Length: 2160 bp
ATGGTGGATGTAGCTGGTGCTGGTGCTGGGAAGGCAGGTGGGGAACCAGATTTGATCCCACCACCTCCTCCAACCATTCCGCCCAATGTGAAGCCAGAAGTCCTGAGTTCTCCCAAGTATTCTATTATGAGTAGGCGTGGTACTGGAACAACTGGGAGACGCATACAATTGCTCGCAAACCACTTCAAAGTCACTGTGAAAGCTCCAGATGCTGTATTCTACCAGTATTCTGTTCATATTACTTCTGAAGACAAGAGGGCCGTTGAAGGCAAGGGAATTGGCAGAAAACTGAATCCATATATTTTCTCAACTGGGATTGTTCTCTTCTTTTGTGTTAGTGAAAGTGGGAGTCCCAGTGAAGTGGCTGAAAAACGGTCAAGACGATCTCTTCAGTCAAAAACTTTTACCGTAGAGTTAAGTTATGCTGCCAAAATACCTCTGAAGTCAATTGCTCTTGCCCTCAAAGGAGCTGATGTCGACAATACTCAGGATGCATTGAGAGTGCTTGATATTATTCTACGGCAGCAAGCAGCTAACATCTTTCCTATGAAGTTAAAGCCTGGTGATGGTGCAAGTGAAGGGGAGACTGCAGAGGTTACTGTGTTTGAGTATTTCACCAAACACTGTGGCATTGAACTCACTTACTCTGCATACCTGCCATGCCTTGATGTTGGCAAACCAAAAAGGCCCAACTATCTGCCTCTGGAGGCTGTATGCAAATACCAGTATGATAGTGATCCTGTGCTTACTACATGTGGTATTTCTATAGAGAAGCAATTAACTCAGTTTGAAGGGCGCGTTCTTGATACTCCGAAGTTAAAGGTAGGTAACAGTGAGGATTGCACCCCTTTTAAGGGACGATGGAACTTCAACAACAAGACACTTTTGAACCCCACTCGCATTGACCGCTGGATTGTTGTCAACTTCTCTGCACGCTGTGATACCAGCCATATCTCGAGGGAGCTTATCAACAGTGGGAGGAAAAAGGGCATTCTTATTGAGCGTCCCTATACGCTGCTTGAGGAAGAACCACAGTCTAGAAGACAAAGCCCTGTTATAAGAGTTGAAAAGATGTTTGAACAAATTCAAACTAAGCTTCCAAGTCCACCTGACTTCATTCTTTGTGTTTTACCAGAGAGGAAAAATTCTGATATTTATGGGCCTTGGAAGAAAAAGAGTCTCAGTGATTTCGGTATTGTCACACAATGCATTTCCCCTTCCAAGATTAATGATCAGTACCTTACCAATGTGCTTCTGAAAATCAATTCTAAGCTTGGAGGAATAAATTCTTTGTTGGCGCTAGAGCATTCCTCACGTGTCCCTTTGATAAAAGATACTCCTACGATGATTTTGGGGATGGATGTATCTCATGGGTCTCCTGGTCGATCTGACATTCCTTCTGTTGCTGCCGTTGTAGGCTCTCGAAGTTGGCCACTTATTTCAAGGTACAGAGCAGCTGTTAGAACACAATCTCCTAAGGTGGAAATGATTGATGCTCTTTACAAGCCACTGGCAAATGGAAAAGATGATGGTATTATCAGGGAACTGCTTGTCGACTTCTATAAGACAAGCGGTGGACGTAAACCAACTCAGATTATTGTCTTCAGGGATGGAGTAAGTGAATCACAGTTTAATCAAGTCCTGAACATTGAGCTGGATCAAATCGTAAAGGCTTACCAGCACCTAGGGGAGGCTAATATTCCAAAGTTTACTGTGATTGTGGCTCAGAAGAATCATCACACAAAGCTATTCCAAACTAATTCCCCTGATAATGTTCCACCAGGGACTGTTGTTGACACCAAAATTGTGCATCCAAGGAATTATGATTTCTACATGTGTGCTCAGGCAGGCATGATTGGAACTTCCAGGCCAGCTCACTATCATGTCTTGCTTGATGAGATTGGCTTTTCCCCTGATGACTTGCAAAACCTGATCCACTCCCTTTCTTATGTGTACCAGAGAAGTACAACTGCAATCTCTATTGTGGCGCCAATATGCTACGCGCACCTTGCTGCAGCACAAGTGGGGCAGTTCATGAAGTTTGAAGATCTCTCGGACACCTCATCGGGGAAGGGCAGTGTCACTTCATCAGAGAGCATCCCAGTTCAAGAGCTTCCCAGGCTTCATGAGAAGGTCCAGGGCTCCATGTTCTTCTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0034641 GO:0035194 GO:0035197 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061980 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

719

Amino Acids

79.6

Weight (kDa)

8.97

Isoelectric Point (pI)

44.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgoN PF16486 53 - 173 5.5e-13 N-terminal domain of argonaute
PAZ PF02170 155 - 237 3.6e-09 PAZ domain
ArgoL2 PF16488 240 - 274 3.2e-08 Argonaute linker 2 domain
Piwi PF02171 372 - 680 2.7e-107 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1058
AarI CACCTGC 1 cut(s) 26
Acc36I ACCTGC 2 cut(s) 26, 663
AccB1I GGYRCC 1 cut(s) 1987
AccI GTMKAC 2 cut(s) 477, 1554
AccII CGCG 2 cut(s) 798, 2003
AciI CCGC 3 cut(s) 80, 907, 1572
AclWI GGATC 4 cut(s) 49, 731, 1665, 1927
AcoI YGGCCR 1 cut(s) 1430
AcsI RAATTY 3 cut(s) 1083, 1144, 1285
AcuI CTGAAG 4 cut(s) 267, 374, 461, 1588
AcvI CACGTG 1 cut(s) 1316
AcyI GRCGYC 1 cut(s) 1988
AdeI CACNNNGTG 1 cut(s) 938
AfaI GTAC 5 cut(s) 142, 1238, 1448, 1955, 1966
AfiI CCNNNNNNNGG 5 cut(s) 566, 853, 854, 1690, 2067
AflIII ACRYGT 3 cut(s) 752, 1315, 1833
AjnI CCWGG 6 cut(s) 559, 1378, 1780, 1865, 2117, 2136
AloI GAACNNNNNNTCC 2 cut(s) 1456, 1488
Alw21I GWGCWC 1 cut(s) 1843
Alw26I GTCTC 4 cut(s) 151, 578, 1184, 1380
AlwI GGATC 4 cut(s) 49, 731, 1665, 1927
AlwNI CAGNNNCTG 2 cut(s) 212, 1787
Ama87I CYCGRG 1 cut(s) 955
AoxI GGCC 5 cut(s) 258, 686, 1160, 1430, 1868
ApeKI GCWGC 8 cut(s) 425, 523, 530, 1015, 1406, 1454, 2012, 2015
ApoI RAATTY 3 cut(s) 1083, 1144, 1285
AseI ATTAAT 1 cut(s) 1227
Asp700I GAANNNNTTC 2 cut(s) 1083, 1285
AspA2I CCTAGG 1 cut(s) 1684
AspLEI GCGC 4 cut(s) 798, 1300, 1990, 2005
AspS9I GGNCC 4 cut(s) 258, 687, 1160, 2134
AsuHPI GGTGA 2 cut(s) 575, 607
AvaI CYCGRG 1 cut(s) 955
AvaII GGWCC 1 cut(s) 2134
AvrII CCTAGG 1 cut(s) 1684
AxyI CCTNAGG 1 cut(s) 1476
BalI TGGCCA 1 cut(s) 1432
BanI GGYRCC 1 cut(s) 1987
BanII GRGCYC 1 cut(s) 2144
BbrPI CACGTG 1 cut(s) 1316
BbsI GAAGAC 3 cut(s) 255, 1048, 1594
Bbv12I GWGCWC 1 cut(s) 1843
BbvI GCAGC 8 cut(s) 412, 535, 542, 1002, 1393, 1466, 1999, 2027
BccI CCATC 5 cut(s) 560, 855, 1351, 1523, 1604
BceAI ACGGC 3 cut(s) 245, 536, 1394
BciT130I CCWGG 6 cut(s) 561, 1380, 1782, 1867, 2119, 2138
BclI TGATCA 1 cut(s) 1231
BcoDI GTCTC 4 cut(s) 151, 578, 1184, 1380
BfaI CTAG 3 cut(s) 1038, 1301, 1685
BfmI CTRYAG 3 cut(s) 588, 765, 2013
BfoI RGCGCY 2 cut(s) 1301, 1991
BfuAI ACCTGC 2 cut(s) 26, 663
BglII AGATCT 1 cut(s) 2047
BisI GCNGC 8 cut(s) 426, 524, 531, 1016, 1407, 1455, 2013, 2016
BlnI CCTAGG 1 cut(s) 1684
BlsI GCNGC 8 cut(s) 427, 525, 532, 1017, 1408, 1456, 2014, 2017
Bme1390I CCNGG 6 cut(s) 561, 1380, 1782, 1867, 2119, 2138
Bme18I GGWCC 1 cut(s) 2134
BmeT110I CYCGRG 1 cut(s) 955
BmgT120I GGNCC 4 cut(s) 258, 687, 1160, 2134
BmiI GGNNCC 3 cut(s) 45, 1989, 2143
BmrFI CCNGG 6 cut(s) 561, 1380, 1782, 1867, 2119, 2138
BmrI ACTGGG 4 cut(s) 162, 321, 348, 2096
BmsI GCATC 5 cut(s) 199, 481, 1483, 1819, 2106
BmuI ACTGGG 4 cut(s) 162, 321, 348, 2096
BpiI GAAGAC 3 cut(s) 255, 1048, 1594
BplI GAGNNNNNCTC 2 cut(s) 1295, 1327
BpmI CTGGAG 2 cut(s) 189, 725
Bpu10I CCTNAGC 1 cut(s) 1842
BpuEI CTTGAG 1 cut(s) 1040
BsaAI YACGTR 1 cut(s) 1316
BsaBI GATNNNNATC 1 cut(s) 735
BsaHI GRCGYC 1 cut(s) 1988
BsaI GGTCTC 1 cut(s) 1380
BsaJI CCNNGG 6 cut(s) 1163, 1684, 1781, 1814, 2117, 2137
BsaXI ACNNNNNCTCC 6 cut(s) 340, 370, 459, 489, 1456, 1486
Bsc4I CCNNNNNNNGG 5 cut(s) 566, 853, 854, 1690, 2067
Bse1I ACTGG 8 cut(s) 148, 157, 223, 316, 354, 724, 1515, 2102
Bse21I CCTNAGG 1 cut(s) 1476
Bse8I GATNNNNATC 1 cut(s) 735
BseBI CCWGG 6 cut(s) 561, 1380, 1782, 1867, 2119, 2138
BseDI CCNNGG 6 cut(s) 1163, 1684, 1781, 1814, 2117, 2137
BseGI GGATG 7 cut(s) 13, 496, 1362, 1366, 1615, 1810, 2097
BseJI GATNNNNATC 1 cut(s) 735
BseLI CCNNNNNNNGG 5 cut(s) 566, 853, 854, 1690, 2067
BseMII CTCAG 7 cut(s) 95, 500, 797, 1195, 1604, 1739, 1856
BseNI ACTGG 8 cut(s) 148, 157, 223, 316, 354, 724, 1515, 2102
BseRI GAGGAG 1 cut(s) 57
BseXI GCAGC 8 cut(s) 412, 535, 542, 1002, 1393, 1466, 1999, 2027
BseYI CCCAGC 1 cut(s) 26
BsgI GTGCAG 1 cut(s) 915
Bsh1236I CGCG 2 cut(s) 798, 2003
BshFI GGCC 5 cut(s) 260, 688, 1162, 1432, 1870
BshNI GGYRCC 1 cut(s) 1987
BsiHKAI GWGCWC 1 cut(s) 1843
BsiHKCI CYCGRG 1 cut(s) 955
BslFI GGGAC 5 cut(s) 336, 870, 990, 1304, 1798
BslI CCNNNNNNNGG 5 cut(s) 566, 853, 854, 1690, 2067
BsmAI GTCTC 4 cut(s) 151, 578, 1184, 1380
BsmBI CGTCTC 1 cut(s) 151
BsmFI GGGAC 5 cut(s) 336, 870, 990, 1304, 1798
BsmI GAATGC 2 cut(s) 990, 1306
BsnI GGCC 5 cut(s) 260, 688, 1162, 1432, 1870
Bso31I GGTCTC 1 cut(s) 1380
BsoBI CYCGRG 1 cut(s) 955
Bsp1286I GDGCHC 2 cut(s) 1843, 2144
Bsp143I GATC 8 cut(s) 54, 383, 736, 1231, 1385, 1657, 1932, 2047
BspACI CCGC 3 cut(s) 80, 907, 1572
BspANI GGCC 5 cut(s) 260, 688, 1162, 1432, 1870
BspCNI CTCAG 7 cut(s) 96, 499, 796, 1194, 1603, 1738, 1855
BspFNI CGCG 2 cut(s) 798, 2003
BspHI TCATGA 2 cut(s) 2034, 2125
BspLI GGNNCC 3 cut(s) 45, 1989, 2143
BspMAI CTGCAG 2 cut(s) 592, 2017
BspMI ACCTGC 2 cut(s) 26, 663
BspPI GGATC 4 cut(s) 49, 731, 1665, 1927
BspT107I GGYRCC 1 cut(s) 1987
BspTNI GGTCTC 1 cut(s) 1380
BsrI ACTGG 8 cut(s) 148, 157, 223, 316, 354, 724, 1515, 2102
BssECI CCNNGG 6 cut(s) 1163, 1684, 1781, 1814, 2117, 2137
BssMI GATC 8 cut(s) 54, 383, 736, 1231, 1385, 1657, 1932, 2047
BssNI GRCGYC 1 cut(s) 1988
BssT1I CCWWGG 3 cut(s) 1163, 1684, 1814
Bst2UI CCWGG 6 cut(s) 561, 1380, 1782, 1867, 2119, 2138
Bst6I CTCTTC 2 cut(s) 329, 393
BstACI GRCGYC 1 cut(s) 1988
BstBAI YACGTR 1 cut(s) 1316
BstC8I GCNNGC 5 cut(s) 174, 528, 934, 1849, 1872
BstENI CCTNNNNNAGG 1 cut(s) 1688
BstF5I GGATG 7 cut(s) 13, 496, 1362, 1366, 1615, 1810, 2097
BstFNI CGCG 2 cut(s) 798, 2003
BstH2I RGCGCY 2 cut(s) 1301, 1991
BstHHI GCGC 4 cut(s) 798, 1300, 1990, 2005
BstKTI GATC 8 cut(s) 57, 386, 739, 1234, 1388, 1660, 1935, 2050
BstMAI GTCTC 4 cut(s) 151, 578, 1184, 1380
BstMBI GATC 8 cut(s) 54, 383, 736, 1231, 1385, 1657, 1932, 2047
BstMWI GCNNNNNNNGC 5 cut(s) 32, 209, 906, 2009, 2119
BstNI CCWGG 6 cut(s) 561, 1380, 1782, 1867, 2119, 2138
BstNSI RCATGY 2 cut(s) 756, 1837
BstSCI CCNGG 6 cut(s) 559, 1378, 1780, 1865, 2117, 2136
BstSFI CTRYAG 3 cut(s) 588, 765, 2013
BstUI CGCG 2 cut(s) 798, 2003
BstV1I GCAGC 8 cut(s) 412, 535, 542, 1002, 1393, 1466, 1999, 2027
BstV2I GAAGAC 3 cut(s) 255, 1048, 1594
BstX2I RGATCY 1 cut(s) 2047
BstXI CCANNNNNNTGG 1 cut(s) 361
BstYI RGATCY 1 cut(s) 2047
Bsu36I CCTNAGG 1 cut(s) 1476
BsuRI GGCC 5 cut(s) 260, 688, 1162, 1432, 1870
BtsCI GGATG 7 cut(s) 13, 496, 1362, 1366, 1615, 1810, 2097
BtsI GCAGTG 1 cut(s) 2083
BtsIMutI CAGTG 8 cut(s) 192, 361, 622, 838, 979, 1189, 1508, 2083
BveI ACCTGC 2 cut(s) 26, 663
Cac8I GCNNGC 5 cut(s) 174, 528, 934, 1849, 1872
CaiI CAGNNNCTG 2 cut(s) 212, 1787
CciI TCATGA 2 cut(s) 2034, 2125
CfoI GCGC 4 cut(s) 798, 1300, 1990, 2005
Cfr13I GGNCC 4 cut(s) 258, 687, 1160, 2134
CseI GACGC 2 cut(s) 168, 992
Csp6I GTAC 5 cut(s) 141, 1237, 1447, 1954, 1965
CspCI CAANNNNNGTGG 4 cut(s) 607, 642, 883, 918
CviAII CATG 9 cut(s) 660, 753, 1370, 1834, 1852, 1883, 2035, 2126, 2146
CviQI GTAC 5 cut(s) 141, 1237, 1447, 1954, 1965
DinI GGCGCC 1 cut(s) 1989
DpnI GATC 8 cut(s) 56, 385, 738, 1233, 1387, 1659, 1934, 2049
DpnII GATC 8 cut(s) 54, 383, 736, 1231, 1385, 1657, 1932, 2047
DraIII CACNNNGTG 1 cut(s) 938
EaeI YGGCCR 1 cut(s) 1430
Eam1104I CTCTTC 2 cut(s) 329, 393
EarI CTCTTC 2 cut(s) 329, 393
EciI GGCGGA 1 cut(s) 69
Eco130I CCWWGG 3 cut(s) 1163, 1684, 1814
Eco24I GRGCYC 1 cut(s) 2144
Eco31I GGTCTC 1 cut(s) 1380
Eco47I GGWCC 1 cut(s) 2134
Eco57I CTGAAG 4 cut(s) 267, 374, 461, 1588
Eco72I CACGTG 1 cut(s) 1316
Eco81I CCTNAGG 1 cut(s) 1476
Eco88I CYCGRG 1 cut(s) 955
EcoNI CCTNNNNNAGG 1 cut(s) 1688
EcoRII CCWGG 6 cut(s) 559, 1378, 1780, 1865, 2117, 2136
EcoT14I CCWWGG 3 cut(s) 1163, 1684, 1814
EcoT22I ATGCAT 2 cut(s) 496, 1211
EcoT38I GRGCYC 1 cut(s) 2144
EgeI GGCGCC 1 cut(s) 1989
EheI GGCGCC 1 cut(s) 1989
ErhI CCWWGG 3 cut(s) 1163, 1684, 1814
Esp3I CGTCTC 1 cut(s) 151
FaeI CATG 9 cut(s) 663, 756, 1373, 1837, 1855, 1886, 2038, 2129, 2149
FaqI GGGAC 5 cut(s) 336, 870, 990, 1304, 1798
FatI CATG 9 cut(s) 659, 752, 1369, 1833, 1851, 1882, 2034, 2125, 2145
FbaI TGATCA 1 cut(s) 1231
FblI GTMKAC 2 cut(s) 477, 1554
Fnu4HI GCNGC 8 cut(s) 426, 524, 531, 1016, 1407, 1455, 2013, 2016
FokI GGATG 7 cut(s) 20, 503, 1369, 1373, 1622, 1797, 2084
FriOI GRGCYC 1 cut(s) 2144
Fsp4HI GCNGC 8 cut(s) 426, 524, 531, 1016, 1407, 1455, 2013, 2016
FspBI CTAG 3 cut(s) 1038, 1301, 1685
GlaI GCGC 4 cut(s) 797, 1299, 1989, 2004
GluI GCNGC 8 cut(s) 426, 524, 531, 1016, 1407, 1455, 2013, 2016
GsaI CCCAGC 1 cut(s) 30
GsuI CTGGAG 2 cut(s) 189, 725
HaeII RGCGCY 2 cut(s) 1301, 1991
HaeIII GGCC 5 cut(s) 260, 688, 1162, 1432, 1870
HgaI GACGC 2 cut(s) 168, 992
HhaI GCGC 4 cut(s) 798, 1300, 1990, 2005
Hin1I GRCGYC 1 cut(s) 1988
Hin1II CATG 9 cut(s) 663, 756, 1373, 1837, 1855, 1886, 2038, 2129, 2149
Hin6I GCGC 4 cut(s) 796, 1298, 1988, 2003
HinP1I GCGC 4 cut(s) 796, 1298, 1988, 2003
HincII GTYRAC 4 cut(s) 478, 922, 1555, 1795
HindII GTYRAC 4 cut(s) 478, 922, 1555, 1795
HindIII AAGCTT 2 cut(s) 1094, 1271
HinfI GANTC 5 cut(s) 292, 349, 1177, 1622, 1732
HphI GGTGA 2 cut(s) 575, 607
Hpy166II GTNNAC 9 cut(s) 478, 922, 1106, 1555, 1577, 1583, 1710, 1795, 1954
Hpy8I GTNNAC 9 cut(s) 478, 922, 1106, 1555, 1577, 1583, 1710, 1795, 1954
HpyAV CCTTC 8 cut(s) 25, 260, 572, 785, 1227, 1407, 2065, 2125
HpyCH4IV ACGT 2 cut(s) 1315, 1579
HpyF10VI GCNNNNNNNGC 5 cut(s) 32, 209, 906, 2009, 2119
HpySE526I ACGT 2 cut(s) 1315, 1579
Hsp92I GRCGYC 1 cut(s) 1988
Hsp92II CATG 9 cut(s) 663, 756, 1373, 1837, 1855, 1886, 2038, 2129, 2149
HspAI GCGC 4 cut(s) 796, 1298, 1988, 2003
KasI GGCGCC 1 cut(s) 1987
Ksp22I TGATCA 1 cut(s) 1231
Kzo9I GATC 8 cut(s) 54, 383, 736, 1231, 1385, 1657, 1932, 2047
LmnI GCTCC 4 cut(s) 208, 467, 961, 2147
Lsp1109I GCAGC 8 cut(s) 412, 535, 542, 1002, 1393, 1466, 1999, 2027
LweI GCATC 5 cut(s) 199, 481, 1483, 1819, 2106
MaeI CTAG 3 cut(s) 1038, 1301, 1685
MaeII ACGT 2 cut(s) 1315, 1579
MaeIII GTNAC 5 cut(s) 190, 595, 827, 1198, 2080
MalI GATC 8 cut(s) 56, 385, 738, 1233, 1387, 1659, 1934, 2049
MboI GATC 8 cut(s) 54, 383, 736, 1231, 1385, 1657, 1932, 2047
MfeI CAATTG 2 cut(s) 167, 447
MflI RGATCY 1 cut(s) 2047
MhlI GDGCHC 2 cut(s) 1843, 2144
MlsI TGGCCA 1 cut(s) 1432
MluNI TGGCCA 1 cut(s) 1432
Mly113I GGCGCC 1 cut(s) 1988
MlyI GAGTC 2 cut(s) 358, 1186
MmeI TCCRAC 1 cut(s) 95
Mox20I TGGCCA 1 cut(s) 1432
Mph1103I ATGCAT 2 cut(s) 496, 1211
MroXI GAANNNNTTC 2 cut(s) 1083, 1285
MscI TGGCCA 1 cut(s) 1432
MseI TTAA 7 cut(s) 416, 554, 779, 818, 852, 1227, 1632
MslI CAYNNNNRTG 1 cut(s) 1881
Msp20I TGGCCA 1 cut(s) 1432
MspA1I CMGCKG 2 cut(s) 909, 1457
MspR9I CCNGG 6 cut(s) 561, 1380, 1782, 1867, 2119, 2138
MunI CAATTG 2 cut(s) 167, 447
Mva1269I GAATGC 2 cut(s) 990, 1306
MvaI CCWGG 6 cut(s) 561, 1380, 1782, 1867, 2119, 2138
MvnI CGCG 2 cut(s) 798, 2003
MwoI GCNNNNNNNGC 5 cut(s) 32, 209, 906, 2009, 2119
NarI GGCGCC 1 cut(s) 1988
NdeII GATC 8 cut(s) 54, 383, 736, 1231, 1385, 1657, 1932, 2047
NlaIII CATG 9 cut(s) 663, 756, 1373, 1837, 1855, 1886, 2038, 2129, 2149
NlaIV GGNNCC 3 cut(s) 45, 1989, 2143
NmuCI GTSAC 3 cut(s) 190, 1198, 2080
NsiI ATGCAT 2 cut(s) 496, 1211
NspI RCATGY 2 cut(s) 756, 1837
PaeR7I CTCGAG 1 cut(s) 955
PagI TCATGA 2 cut(s) 2034, 2125
PaqCI CACCTGC 1 cut(s) 26
PciI ACATGT 2 cut(s) 752, 1833
PcsI WCGNNNNNNNCGW 1 cut(s) 379
PctI GAATGC 2 cut(s) 990, 1306
PdmI GAANNNNTTC 2 cut(s) 1083, 1285
PfeI GAWTC 3 cut(s) 292, 1622, 1732
PkrI GCNGC 8 cut(s) 427, 525, 532, 1017, 1408, 1456, 2014, 2017
PleI GAGTC 2 cut(s) 357, 1185
PluTI GGCGCC 1 cut(s) 1991
PmaCI CACGTG 1 cut(s) 1316
PmlI CACGTG 1 cut(s) 1316
PpsI GAGTC 2 cut(s) 357, 1185
Ppu21I YACGTR 1 cut(s) 1316
PscI ACATGT 2 cut(s) 752, 1833
PshBI ATTAAT 1 cut(s) 1227
PsiI TTATAA 1 cut(s) 1058
Psp6I CCWGG 6 cut(s) 559, 1378, 1780, 1865, 2117, 2136
PspCI CACGTG 1 cut(s) 1316
PspFI CCCAGC 1 cut(s) 26
PspGI CCWGG 6 cut(s) 559, 1378, 1780, 1865, 2117, 2136
PspN4I GGNNCC 3 cut(s) 45, 1989, 2143
PspPI GGNCC 4 cut(s) 258, 687, 1160, 2134
PstI CTGCAG 2 cut(s) 592, 2017
PstNI CAGNNNCTG 2 cut(s) 212, 1787
PsuI RGATCY 1 cut(s) 2047
PvuII CAGCTG 1 cut(s) 1457
RsaI GTAC 5 cut(s) 142, 1238, 1448, 1955, 1966
RsaNI GTAC 5 cut(s) 141, 1237, 1447, 1954, 1965
RseI CAYNNNNRTG 1 cut(s) 1881
SalI GTCGAC 2 cut(s) 476, 1553
SaqAI TTAA 7 cut(s) 416, 554, 779, 818, 852, 1227, 1632
SatI GCNGC 8 cut(s) 426, 524, 531, 1016, 1407, 1455, 2013, 2016
Sau3AI GATC 8 cut(s) 54, 383, 736, 1231, 1385, 1657, 1932, 2047
Sau96I GGNCC 4 cut(s) 258, 687, 1160, 2134
SchI GAGTC 2 cut(s) 358, 1186
ScrFI CCNGG 6 cut(s) 561, 1380, 1782, 1867, 2119, 2138
SduI GDGCHC 2 cut(s) 1843, 2144
SfaNI GCATC 5 cut(s) 199, 481, 1483, 1819, 2106
SfcI CTRYAG 3 cut(s) 588, 765, 2013
SfoI GGCGCC 1 cut(s) 1989
Sfr274I CTCGAG 1 cut(s) 955
SinI GGWCC 1 cut(s) 2134
SlaI CTCGAG 1 cut(s) 955
SmiMI CAYNNNNRTG 1 cut(s) 1881
SmlI CTYRAG 2 cut(s) 955, 1019
SmoI CTYRAG 2 cut(s) 955, 1019
SsiI CCGC 3 cut(s) 80, 907, 1572
SspDI GGCGCC 1 cut(s) 1987
SspI AATATT 1 cut(s) 1699
SspMI CTAG 3 cut(s) 1038, 1301, 1685
StyD4I CCNGG 6 cut(s) 559, 1378, 1780, 1865, 2117, 2136
StyI CCWWGG 3 cut(s) 1163, 1684, 1814
TaiI ACGT 2 cut(s) 1318, 1582
TaqI TCGA 5 cut(s) 477, 956, 1384, 1423, 1554
TatI WGTACW 1 cut(s) 1964
TfiI GAWTC 3 cut(s) 292, 1622, 1732
Tru1I TTAA 7 cut(s) 416, 554, 779, 818, 852, 1227, 1632
Tru9I TTAA 7 cut(s) 416, 554, 779, 818, 852, 1227, 1632
TscAI CASTG 8 cut(s) 199, 361, 629, 838, 979, 1189, 1515, 2083
TseFI GTSAC 3 cut(s) 190, 1198, 2080
TseI GCWGC 8 cut(s) 425, 523, 530, 1015, 1406, 1454, 2012, 2015
Tsp45I GTSAC 3 cut(s) 190, 1198, 2080
TspDTI ATGAA 7 cut(s) 224, 563, 1105, 2023, 2051, 2076, 2114
TspRI CASTG 8 cut(s) 199, 361, 629, 838, 979, 1189, 1515, 2083
VpaK11BI GGWCC 1 cut(s) 2134
VspI ATTAAT 1 cut(s) 1227
XagI CCTNNNNNAGG 1 cut(s) 1688
XapI RAATTY 3 cut(s) 1083, 1144, 1285
XbaI TCTAGA 1 cut(s) 1037
XceI RCATGY 2 cut(s) 756, 1837
XhoI CTCGAG 1 cut(s) 955
XmaJI CCTAGG 1 cut(s) 1684
XmiI GTMKAC 2 cut(s) 477, 1554
XmnI GAANNNNTTC 2 cut(s) 1083, 1285
XspI CTAG 3 cut(s) 1038, 1301, 1685
Zsp2I ATGCAT 2 cut(s) 496, 1211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.