RLG00000021043

Belongs to the argonaute family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0001253
Physical Location & Seq
Reverse (-)
71300958 .. 71308551
7594 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021043

Sequence Viewer

Length: 2397 bp
ATGGAGGATTTGCCTCCACCACCTCCTATTGTACCACCGAATGTGAAGCCAGAAGTTGTGGCTCTGGCTCCTCCTAAGCACTCTATTATGGTTAGGCCACGTGGGAGTGGAACCACAGGGCGGCGCATACAATTGAGCACTAACCACTTCAAAGTTTCTGTGAAGAATCCAGATGCTGTGTTCTACCAGTACTCTGTTCTGATAACTTATGAAGATAAGAGACCTGTTGAAGGCATGGGACTTGGGAGAAAGCTGGTGGATAAGCTCTATCAAACATACTCTTCAGAGTTTGCTGGTAAAAAGTTTGCATATGATGGGGAGAAAGCTTTATACACAGTCGGTCCTCTCCTGCGAAACAAGCTTGAGTTCACAGTTGTTTTGGAGGAGTCATTTACAAAGAGCAACAAAATTGGGAAGTCTGGTGAGACTGATAAAAGGATGAAGCACTGTTCCAATCGGTCGAAAACATTCAATGTAGAGATAAGTTATGCTGCCAAAATAACTTTCAAGTCAATTGCTCTTGCCCTTCAAGGAGCTGAAGTAGACAACACTCAGGATGCATTGAGAGTGCTTGATATTATTCTACGGCAGAAAGCAGCTAAGATGGGATGCCTTCTAGTACGACAGTCATTCTTCCATGATGACTCCAGGAACTTTGTTGAGATTGGAGGAGGTGTGACTGGTGTCCGGGGTTTTCATTCCAGTTTCCGTCCAACTCAGGGGGGCATGTCCTTGAATATGGATGTATCTACAACAATGATTGTGACGCCTGGACCTGTTATTGATTTTCTGTTAACCAACCAGGGTGTACGAGAACCCCGCTACATTGACTGGGTAAAGGCCAAAAGAATGCTGAAAAATATGAGGATTACAACGAGACACCGTAACATGGAGTGCAAAATCACTGGGTTGAGTGAGAAGACCTGCAATAATCAGTTGTTTAATCTGAAGCTAAGGAGTGGTGATGGCATGAGTGAGGGGGAAACTGTGGAGATTACGGTGTATGAATATTTCGTCAAACACTGTGGCATAGAGCTCACCTATTCTCAACACATGCCATGCCTTGATGTTGGCAAGCCAAAGAGGCCCACTTATGTTCCAGTTGAGCTATGTTCACTTGTTTCACTACAAAGGTATACAAAAGCATTATCTTCCCAGCAAAGAGCCTCCTTAGTGGAAAAATCAAGGCAGAAGCCTCTGGAGAGAATAAAGAGTGTGACTGATGCTTTAAGAAATTACCGCTATGATGAGGATCCTGTGCTTGCTGAATGTGGTATATCTATAGAGAAGCAACTGATTCAGATGGATGGCCGTATTCTTGAGACCCCAAAGTTAAAGGTCGGTGGCAGTGAGGACATGATGCCCTTTAAGGGACGATGGAACTTCAAAGGAAAGTCATTTTTGGATCCTACTCGCATTAACTCTTGGCTAGCTGTCAACTTCTCCGGACGCTGTGACCTTAGTCAAATCTCTCGGGAGCTTATCAATGTTGGGAAGAAGACTGGAATTGTAAGGCCTTGGAAGAAAAAAACTCTAGTTGACTTTGGGATTCCAACACAATGTATTTCCCCACCCAAGCTTAGCGATCCTTACCTGACTAATGTCCTAATGAAAATCAATACCAAGCTTGGAGGAATAAATTCTCTCTTGGCACTGGAGTACTCCTCACGTGTTCCTCTTATAAATGATACTCCTACAATGATTTTGGGGATGGATGTGGAGATGATTGATGGTCTATACAAGCCACTTCCAAATGGTAATGATGATGGTATTATCAGGGAACTGCTTCTGGACTTCTATAACACAAGCAAAGGACGCAAACCAACTCAGATAATTGTTTTCAGGGATGGCGTCAGTGAATCACAGTTTAATCAAGTGTTGAACATTGAGCTGGATCAAATTGTAAAGGCTTACCAGAACCTTGGGGAGGAAAATGTTCCAAAGTTCACTCTCATTATAGCTCAAAAGAATCATCACACAAAGCTATTCCAAGCTAATAGCCCTGACAATGTTCCACCAGGGACAGTTGTTGACACAAAAATCGTGCACCCAAGGATCTATGATTTCTACATGTGTGCTCAGGCTGGCATGATTGGAACTTCGAGGCCAGCTCACTATCATGTCTTGCTTGATGAGATTGGCTTTTCCCCTGATGACTTGCAGAACCTGATTCACTCCCTTTCTTATGTGTACCAAAGGAGCTGTACTGCAATATCCATTGTGGCACCCATATGCTATGCGCACCTTGCTGCAGCACAAGTGGGGCAGTTTATGAAGTTTGAAGATCTCTCGGAAACTGCATCAGCTAAAGGTAGTGTCACAACATCAGAGAGCATCCCAGTTCCCGAGCTCCCTAGGCTTCATAAAAAGGTCCAGGGCTCCATGTTCTTCTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0034641 GO:0035194 GO:0035197 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061980 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

799

Amino Acids

89.51

Weight (kDa)

9.18

Isoelectric Point (pI)

37.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgoN PF16486 41 - 195 1.2e-29 N-terminal domain of argonaute
ArgoL1 PF08699 207 - 255 8.3e-18 Argonaute linker 1 domain
PAZ PF02170 261 - 391 5e-29 PAZ domain
ArgoL2 PF16488 401 - 446 4.6e-12 Argonaute linker 2 domain
Piwi PF02171 499 - 574 1.1e-13 Piwi domain
Piwi PF02171 591 - 759 1.8e-68 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1682
Acc16I TGCGCA 1 cut(s) 2241
Acc36I ACCTGC 1 cut(s) 932
AccB1I GGYRCC 1 cut(s) 2224
AccI GTMKAC 2 cut(s) 543, 1136
AccIII TCCGGA 1 cut(s) 1445
AciI CCGC 3 cut(s) 121, 820, 1240
AclWI GGATC 7 cut(s) 1247, 1260, 1400, 1413, 1580, 1902, 2063
AcoI YGGCCR 1 cut(s) 1309
AcsI RAATTY 1 cut(s) 1639
AcuI CTGAAG 3 cut(s) 267, 558, 968
AcvI CACGTG 2 cut(s) 101, 1670
AcyI GRCGYC 2 cut(s) 767, 1851
AfaI GTAC 7 cut(s) 33, 191, 621, 810, 1661, 2192, 2206
AfiI CCNNNNNNNGG 6 cut(s) 120, 230, 719, 889, 1370, 1927
AflIII ACRYGT 2 cut(s) 1669, 2070
AgsI TTSAA 9 cut(s) 151, 230, 472, 508, 530, 736, 1387, 1882, 2282
AjnI CCWGG 5 cut(s) 647, 769, 801, 2017, 2373
AjuI GAANNNNNNNTTGG 2 cut(s) 488, 520
Alw21I GWGCWC 5 cut(s) 140, 1038, 2049, 2080, 2352
Alw26I GTCTC 4 cut(s) 214, 419, 871, 1316
Alw44I GTGCAC 1 cut(s) 2045
AlwI GGATC 7 cut(s) 1247, 1260, 1400, 1413, 1580, 1902, 2063
AlwNI CAGNNNCTG 2 cut(s) 176, 2167
Ama87I CYCGRG 2 cut(s) 1473, 2345
Aor13HI TCCGGA 1 cut(s) 1445
AoxI GGCC 6 cut(s) 95, 840, 1085, 1309, 1514, 2105
ApaLI GTGCAC 1 cut(s) 2045
ApeKI GCWGC 4 cut(s) 491, 596, 2249, 2252
ApoI RAATTY 1 cut(s) 1639
Asp700I GAANNNNTTC 4 cut(s) 467, 1639, 1785, 1935
AspA2I CCTAGG 1 cut(s) 2354
AspLEI GCGC 2 cut(s) 126, 2242
AspS9I GGNCC 4 cut(s) 341, 773, 1086, 2371
AsuC2I CCSGG 1 cut(s) 689
AsuHPI GGTGA 3 cut(s) 434, 974, 1030
AsuNHI GCTAGC 1 cut(s) 1429
AvaI CYCGRG 2 cut(s) 1473, 2345
AvaII GGWCC 3 cut(s) 341, 773, 2371
AvrII CCTAGG 1 cut(s) 2354
BaeGI GKGCMC 1 cut(s) 2049
BamHI GGATCC 2 cut(s) 1252, 1405
BanI GGYRCC 1 cut(s) 2224
BanII GRGCYC 3 cut(s) 1038, 2352, 2381
BbrPI CACGTG 2 cut(s) 101, 1670
BbsI GAAGAC 2 cut(s) 926, 1505
Bbv12I GWGCWC 5 cut(s) 140, 1038, 2049, 2080, 2352
BbvI GCAGC 4 cut(s) 478, 608, 2236, 2264
BceAI ACGGC 2 cut(s) 602, 1296
BciT130I CCWGG 5 cut(s) 649, 771, 803, 2019, 2375
BcnI CCSGG 1 cut(s) 689
BcoDI GTCTC 4 cut(s) 214, 419, 871, 1316
BfaI CTAG 4 cut(s) 617, 1430, 1535, 2355
BfmI CTRYAG 2 cut(s) 1281, 2250
BfuAI ACCTGC 1 cut(s) 932
BglI GCCNNNNNGGC 1 cut(s) 1084
BglII AGATCT 1 cut(s) 2284
BisI GCNGC 5 cut(s) 122, 492, 597, 2250, 2253
BlnI CCTAGG 1 cut(s) 2354
BlpI GCTNAGC 1 cut(s) 1580
BlsI GCNGC 5 cut(s) 123, 493, 598, 2251, 2254
BmcAI AGTACT 2 cut(s) 191, 1661
Bme1390I CCNGG 6 cut(s) 649, 689, 771, 803, 2019, 2375
Bme18I GGWCC 3 cut(s) 341, 773, 2371
BmeT110I CYCGRG 2 cut(s) 1473, 2345
BmgT120I GGNCC 4 cut(s) 341, 773, 1086, 2371
BmiI GGNNCC 6 cut(s) 69, 112, 1254, 1407, 2226, 2380
BmrFI CCNGG 6 cut(s) 649, 689, 771, 803, 2019, 2375
BmrI ACTGGG 3 cut(s) 841, 915, 2333
BmsI GCATC 7 cut(s) 163, 547, 599, 1213, 1350, 2309, 2343
BmtI GCTAGC 1 cut(s) 1433
BmuI ACTGGG 3 cut(s) 841, 915, 2333
BoxI GACNNNNGTC 3 cut(s) 683, 1461, 1601
BpiI GAAGAC 2 cut(s) 926, 1505
BplI GAGNNNNNCTC 4 cut(s) 1649, 1681, 2095, 2127
BpmI CTGGAG 3 cut(s) 631, 1220, 1676
Bpu10I CCTNAGC 3 cut(s) 75, 953, 2079
Bpu1102I GCTNAGC 1 cut(s) 1580
BpuEI CTTGAG 2 cut(s) 383, 1340
BpuMI CCSGG 1 cut(s) 689
BsaAI YACGTR 2 cut(s) 101, 1670
BsaBI GATNNNNATC 1 cut(s) 1251
BsaHI GRCGYC 2 cut(s) 767, 1851
BsaI GGTCTC 2 cut(s) 214, 1316
BsaJI CCNNGG 8 cut(s) 688, 802, 1517, 1921, 2018, 2051, 2354, 2374
BsaWI WCCGGW 1 cut(s) 1445
BsaXI ACNNNNNCTCC 4 cut(s) 525, 555, 660, 690
Bsc4I CCNNNNNNNGG 6 cut(s) 120, 230, 719, 889, 1370, 1927
Bse1I ACTGG 9 cut(s) 187, 685, 702, 836, 910, 1100, 1507, 1659, 2339
Bse8I GATNNNNATC 1 cut(s) 1251
BseAI TCCGGA 1 cut(s) 1445
BseBI CCWGG 5 cut(s) 649, 771, 803, 2019, 2375
BseDI CCNNGG 8 cut(s) 688, 802, 1517, 1921, 2018, 2051, 2354, 2374
BseGI GGATG 9 cut(s) 444, 562, 614, 748, 1312, 1716, 1720, 1852, 2334
BseJI GATNNNNATC 1 cut(s) 1251
BseLI CCNNNNNNNGG 6 cut(s) 120, 230, 719, 889, 1370, 1927
BseMII CTCAG 4 cut(s) 566, 731, 1841, 2093
BseNI ACTGG 9 cut(s) 187, 685, 702, 836, 910, 1100, 1507, 1659, 2339
BseRI GAGGAG 4 cut(s) 60, 398, 684, 1654
BseSI GKGCMC 1 cut(s) 2049
BseXI GCAGC 4 cut(s) 478, 608, 2236, 2264
BseYI CCCAGC 1 cut(s) 1155
Bsh1285I CGRYCG 1 cut(s) 461
BshFI GGCC 6 cut(s) 97, 842, 1087, 1311, 1516, 2107
BshNI GGYRCC 1 cut(s) 2224
BsiEI CGRYCG 1 cut(s) 461
BsiHKAI GWGCWC 5 cut(s) 140, 1038, 2049, 2080, 2352
BsiHKCI CYCGRG 2 cut(s) 1473, 2345
BsiSI CCGG 2 cut(s) 688, 1446
BslFI GGGAC 3 cut(s) 252, 1386, 2035
BslI CCNNNNNNNGG 6 cut(s) 120, 230, 719, 889, 1370, 1927
BsmAI GTCTC 4 cut(s) 214, 419, 871, 1316
BsmFI GGGAC 3 cut(s) 252, 1386, 2035
BsmI GAATGC 1 cut(s) 855
BsnI GGCC 6 cut(s) 97, 842, 1087, 1311, 1516, 2107
Bso31I GGTCTC 2 cut(s) 214, 1316
BsoBI CYCGRG 2 cut(s) 1473, 2345
Bsp1286I GDGCHC 6 cut(s) 140, 1038, 2049, 2080, 2352, 2381
Bsp13I TCCGGA 1 cut(s) 1445
Bsp143I GATC 6 cut(s) 1252, 1405, 1585, 1894, 2055, 2284
Bsp1720I GCTNAGC 1 cut(s) 1580
BspACI CCGC 3 cut(s) 121, 820, 1240
BspANI GGCC 6 cut(s) 97, 842, 1087, 1311, 1516, 2107
BspCNI CTCAG 4 cut(s) 565, 730, 1840, 2092
BspEI TCCGGA 1 cut(s) 1445
BspLI GGNNCC 6 cut(s) 69, 112, 1254, 1407, 2226, 2380
BspMAI CTGCAG 1 cut(s) 2254
BspMI ACCTGC 1 cut(s) 932
BspOI GCTAGC 1 cut(s) 1433
BspPI GGATC 7 cut(s) 1247, 1260, 1400, 1413, 1580, 1902, 2063
BspT107I GGYRCC 1 cut(s) 2224
BspTNI GGTCTC 2 cut(s) 214, 1316
BsrI ACTGG 9 cut(s) 187, 685, 702, 836, 910, 1100, 1507, 1659, 2339
BssECI CCNNGG 8 cut(s) 688, 802, 1517, 1921, 2018, 2051, 2354, 2374
BssMI GATC 6 cut(s) 1252, 1405, 1585, 1894, 2055, 2284
BssNAI GTATAC 1 cut(s) 1137
BssNI GRCGYC 2 cut(s) 767, 1851
BssT1I CCWWGG 4 cut(s) 1517, 1921, 2051, 2354
Bst1107I GTATAC 1 cut(s) 1137
Bst2UI CCWGG 5 cut(s) 649, 771, 803, 2019, 2375
Bst6I CTCTTC 1 cut(s) 286
BstACI GRCGYC 2 cut(s) 767, 1851
BstBAI YACGTR 2 cut(s) 101, 1670
BstC8I GCNNGC 5 cut(s) 1076, 1263, 1431, 2086, 2109
BstENI CCTNNNNNAGG 2 cut(s) 228, 1925
BstF5I GGATG 9 cut(s) 444, 562, 614, 748, 1312, 1716, 1720, 1852, 2334
BstHHI GCGC 2 cut(s) 126, 2242
BstKTI GATC 6 cut(s) 1255, 1408, 1588, 1897, 2058, 2287
BstMAI GTCTC 4 cut(s) 214, 419, 871, 1316
BstMBI GATC 6 cut(s) 1252, 1405, 1585, 1894, 2055, 2284
BstMCI CGRYCG 1 cut(s) 461
BstMWI GCNNNNNNNGC 5 cut(s) 358, 1084, 1815, 2246, 2356
BstNI CCWGG 5 cut(s) 649, 771, 803, 2019, 2375
BstNSI RCATGY 3 cut(s) 730, 1057, 2074
BstPAI GACNNNNGTC 3 cut(s) 683, 1461, 1601
BstSCI CCNGG 6 cut(s) 647, 687, 769, 801, 2017, 2373
BstSFI CTRYAG 2 cut(s) 1281, 2250
BstSLI GKGCMC 1 cut(s) 2049
BstV1I GCAGC 4 cut(s) 478, 608, 2236, 2264
BstV2I GAAGAC 2 cut(s) 926, 1505
BstX2I RGATCY 4 cut(s) 1252, 1405, 2055, 2284
BstXI CCANNNNNNTGG 1 cut(s) 1922
BstYI RGATCY 4 cut(s) 1252, 1405, 2055, 2284
BstZ17I GTATAC 1 cut(s) 1137
BsuRI GGCC 6 cut(s) 97, 842, 1087, 1311, 1516, 2107
BtsCI GGATG 9 cut(s) 444, 562, 614, 748, 1312, 1716, 1720, 1852, 2334
BtsI GCAGTG 1 cut(s) 1354
BtsIMutI CAGTG 6 cut(s) 445, 903, 1021, 1354, 1652, 1861
BveI ACCTGC 1 cut(s) 932
Cac8I GCNNGC 5 cut(s) 1076, 1263, 1431, 2086, 2109
CaiI CAGNNNCTG 2 cut(s) 176, 2167
CfoI GCGC 2 cut(s) 126, 2242
Cfr13I GGNCC 4 cut(s) 341, 773, 1086, 2371
CseI GACGC 4 cut(s) 775, 1458, 1824, 1840
Csp6I GTAC 7 cut(s) 32, 190, 620, 809, 1660, 2191, 2205
CspCI CAANNNNNGTGG 2 cut(s) 1006, 1041
CviQI GTAC 7 cut(s) 32, 190, 620, 809, 1660, 2191, 2205
DpnI GATC 6 cut(s) 1254, 1407, 1587, 1896, 2057, 2286
DpnII GATC 6 cut(s) 1252, 1405, 1585, 1894, 2055, 2284
EaeI YGGCCR 1 cut(s) 1309
Eam1104I CTCTTC 1 cut(s) 286
EarI CTCTTC 1 cut(s) 286
Ecl136II GAGCTC 2 cut(s) 1036, 2350
Eco130I CCWWGG 4 cut(s) 1517, 1921, 2051, 2354
Eco147I AGGCCT 1 cut(s) 1516
Eco24I GRGCYC 3 cut(s) 1038, 2352, 2381
Eco31I GGTCTC 2 cut(s) 214, 1316
Eco47I GGWCC 3 cut(s) 341, 773, 2371
Eco53kI GAGCTC 2 cut(s) 1036, 2350
Eco57I CTGAAG 3 cut(s) 267, 558, 968
Eco72I CACGTG 2 cut(s) 101, 1670
Eco88I CYCGRG 2 cut(s) 1473, 2345
EcoICRI GAGCTC 2 cut(s) 1036, 2350
EcoNI CCTNNNNNAGG 2 cut(s) 228, 1925
EcoRII CCWGG 5 cut(s) 647, 769, 801, 2017, 2373
EcoT14I CCWWGG 4 cut(s) 1517, 1921, 2051, 2354
EcoT22I ATGCAT 1 cut(s) 562
EcoT38I GRGCYC 3 cut(s) 1038, 2352, 2381
ErhI CCWWGG 4 cut(s) 1517, 1921, 2051, 2354
FaqI GGGAC 3 cut(s) 252, 1386, 2035
FauI CCCGC 1 cut(s) 827
FauNDI CATATG 2 cut(s) 310, 2231
FblI GTMKAC 2 cut(s) 543, 1136
Fnu4HI GCNGC 5 cut(s) 122, 492, 597, 2250, 2253
FokI GGATG 9 cut(s) 451, 569, 621, 755, 1319, 1723, 1727, 1859, 2321
FriOI GRGCYC 3 cut(s) 1038, 2352, 2381
Fsp4HI GCNGC 5 cut(s) 122, 492, 597, 2250, 2253
FspAI RTGCGCAY 1 cut(s) 2241
FspBI CTAG 4 cut(s) 617, 1430, 1535, 2355
FspI TGCGCA 1 cut(s) 2241
GlaI GCGC 2 cut(s) 125, 2241
GluI GCNGC 5 cut(s) 122, 492, 597, 2250, 2253
GsaI CCCAGC 1 cut(s) 1159
GsuI CTGGAG 3 cut(s) 631, 1220, 1676
HaeIII GGCC 6 cut(s) 97, 842, 1087, 1311, 1516, 2107
HapII CCGG 2 cut(s) 688, 1446
HgaI GACGC 4 cut(s) 775, 1458, 1824, 1840
HhaI GCGC 2 cut(s) 126, 2242
Hin1I GRCGYC 2 cut(s) 767, 1851
Hin6I GCGC 2 cut(s) 124, 2240
HinP1I GCGC 2 cut(s) 124, 2240
HincII GTYRAC 4 cut(s) 795, 1438, 1540, 2032
HindII GTYRAC 4 cut(s) 795, 1438, 1540, 2032
HindIII AAGCTT 4 cut(s) 324, 359, 1577, 1625
HinfI GANTC 8 cut(s) 166, 386, 644, 1297, 1549, 1859, 1969, 2170
HpaI GTTAAC 1 cut(s) 795
HpaII CCGG 2 cut(s) 688, 1446
HphI GGTGA 3 cut(s) 434, 974, 1030
Hpy188I TCNGA 7 cut(s) 201, 286, 948, 1302, 1830, 2293, 2329
Hpy188III TCNNGA 8 cut(s) 170, 554, 1199, 1319, 1446, 1475, 1790, 2345
HpyAV CCTTC 3 cut(s) 224, 536, 623
HpyCH4IV ACGT 2 cut(s) 100, 1669
HpyCH4V TGCA 9 cut(s) 308, 560, 897, 927, 2047, 2161, 2210, 2252, 2300
HpyF10VI GCNNNNNNNGC 5 cut(s) 358, 1084, 1815, 2246, 2356
HpySE526I ACGT 2 cut(s) 100, 1669
Hsp92I GRCGYC 2 cut(s) 767, 1851
HspAI GCGC 2 cut(s) 124, 2240
Kpn2I TCCGGA 1 cut(s) 1445
KspAI GTTAAC 1 cut(s) 795
Kzo9I GATC 6 cut(s) 1252, 1405, 1585, 1894, 2055, 2284
LmnI GCTCC 6 cut(s) 73, 533, 1477, 2199, 2355, 2384
Lsp1109I GCAGC 4 cut(s) 478, 608, 2236, 2264
LweI GCATC 7 cut(s) 163, 547, 599, 1213, 1350, 2309, 2343
MaeI CTAG 4 cut(s) 617, 1430, 1535, 2355
MaeII ACGT 2 cut(s) 100, 1669
MaeIII GTNAC 6 cut(s) 676, 763, 884, 1216, 1454, 2317
MalI GATC 6 cut(s) 1254, 1407, 1587, 1896, 2057, 2286
MboI GATC 6 cut(s) 1252, 1405, 1585, 1894, 2055, 2284
MfeI CAATTG 2 cut(s) 131, 513
MflI RGATCY 4 cut(s) 1252, 1405, 2055, 2284
MhlI GDGCHC 6 cut(s) 140, 1038, 2049, 2080, 2352, 2381
MluCI AATT 8 cut(s) 131, 408, 513, 1234, 1506, 1639, 1833, 1899
MlyI GAGTC 2 cut(s) 395, 638
MmeI TCCRAC 2 cut(s) 737, 1577
Mph1103I ATGCAT 1 cut(s) 562
MroI TCCGGA 1 cut(s) 1445
MroXI GAANNNNTTC 4 cut(s) 467, 1639, 1785, 1935
MseI TTAA 7 cut(s) 794, 942, 1229, 1334, 1368, 1419, 1869
MslI CAYNNNNRTG 2 cut(s) 2118, 2230
MspI CCGG 2 cut(s) 688, 1446
MspR9I CCNGG 6 cut(s) 649, 689, 771, 803, 2019, 2375
MunI CAATTG 2 cut(s) 131, 513
Mva1269I GAATGC 1 cut(s) 855
MvaI CCWGG 5 cut(s) 649, 771, 803, 2019, 2375
MwoI GCNNNNNNNGC 5 cut(s) 358, 1084, 1815, 2246, 2356
NciI CCSGG 1 cut(s) 689
NdeI CATATG 2 cut(s) 310, 2231
NdeII GATC 6 cut(s) 1252, 1405, 1585, 1894, 2055, 2284
NheI GCTAGC 1 cut(s) 1429
NlaIV GGNNCC 6 cut(s) 69, 112, 1254, 1407, 2226, 2380
NmuCI GTSAC 5 cut(s) 676, 763, 1216, 1454, 2317
NsbI TGCGCA 1 cut(s) 2241
NsiI ATGCAT 1 cut(s) 562
NspI RCATGY 3 cut(s) 730, 1057, 2074
PceI AGGCCT 1 cut(s) 1516
PciI ACATGT 1 cut(s) 2070
PctI GAATGC 1 cut(s) 855
PdmI GAANNNNTTC 4 cut(s) 467, 1639, 1785, 1935
PfeI GAWTC 6 cut(s) 166, 1297, 1549, 1859, 1969, 2170
PfoI TCCNGGA 1 cut(s) 647
PkrI GCNGC 5 cut(s) 123, 493, 598, 2251, 2254
PleI GAGTC 2 cut(s) 394, 638
PmaCI CACGTG 2 cut(s) 101, 1670
PmlI CACGTG 2 cut(s) 101, 1670
PpsI GAGTC 2 cut(s) 394, 638
Ppu21I YACGTR 2 cut(s) 101, 1670
PscI ACATGT 1 cut(s) 2070
PshAI GACNNNNGTC 3 cut(s) 683, 1461, 1601
PsiI TTATAA 1 cut(s) 1682
Psp124BI GAGCTC 2 cut(s) 1038, 2352
Psp6I CCWGG 5 cut(s) 647, 769, 801, 2017, 2373
PspCI CACGTG 2 cut(s) 101, 1670
PspFI CCCAGC 1 cut(s) 1155
PspGI CCWGG 5 cut(s) 647, 769, 801, 2017, 2373
PspN4I GGNNCC 6 cut(s) 69, 112, 1254, 1407, 2226, 2380
PspPI GGNCC 4 cut(s) 341, 773, 1086, 2371
PstI CTGCAG 1 cut(s) 2254
PstNI CAGNNNCTG 2 cut(s) 176, 2167
PsuI RGATCY 4 cut(s) 1252, 1405, 2055, 2284
RsaI GTAC 7 cut(s) 33, 191, 621, 810, 1661, 2192, 2206
RsaNI GTAC 7 cut(s) 32, 190, 620, 809, 1660, 2191, 2205
RseI CAYNNNNRTG 2 cut(s) 2118, 2230
SacI GAGCTC 2 cut(s) 1038, 2352
SaqAI TTAA 7 cut(s) 794, 942, 1229, 1334, 1368, 1419, 1869
SatI GCNGC 5 cut(s) 122, 492, 597, 2250, 2253
Sau3AI GATC 6 cut(s) 1252, 1405, 1585, 1894, 2055, 2284
Sau96I GGNCC 4 cut(s) 341, 773, 1086, 2371
ScaI AGTACT 2 cut(s) 191, 1661
SchI GAGTC 2 cut(s) 395, 638
ScrFI CCNGG 6 cut(s) 649, 689, 771, 803, 2019, 2375
SduI GDGCHC 6 cut(s) 140, 1038, 2049, 2080, 2352, 2381
SfaNI GCATC 7 cut(s) 163, 547, 599, 1213, 1350, 2309, 2343
SfcI CTRYAG 2 cut(s) 1281, 2250
SinI GGWCC 3 cut(s) 341, 773, 2371
SmiMI CAYNNNNRTG 2 cut(s) 2118, 2230
SmlI CTYRAG 2 cut(s) 362, 1319
SmoI CTYRAG 2 cut(s) 362, 1319
Sse9I AATT 8 cut(s) 131, 408, 513, 1234, 1506, 1639, 1833, 1899
SseBI AGGCCT 1 cut(s) 1516
SsiI CCGC 3 cut(s) 121, 820, 1240
SspI AATATT 1 cut(s) 1010
SspMI CTAG 4 cut(s) 617, 1430, 1535, 2355
SstI GAGCTC 2 cut(s) 1038, 2352
StuI AGGCCT 1 cut(s) 1516
StyD4I CCNGG 6 cut(s) 647, 687, 769, 801, 2017, 2373
StyI CCWWGG 4 cut(s) 1517, 1921, 2051, 2354
TaiI ACGT 2 cut(s) 103, 1672
TaqI TCGA 2 cut(s) 461, 2102
TaqII GACCGA 2 cut(s) 329, 447
TasI AATT 8 cut(s) 131, 408, 513, 1234, 1506, 1639, 1833, 1899
TatI WGTACW 3 cut(s) 189, 1659, 2204
TauI GCSGC 1 cut(s) 124
TfiI GAWTC 6 cut(s) 166, 1297, 1549, 1859, 1969, 2170
Tru1I TTAA 7 cut(s) 794, 942, 1229, 1334, 1368, 1419, 1869
Tru9I TTAA 7 cut(s) 794, 942, 1229, 1334, 1368, 1419, 1869
TscAI CASTG 6 cut(s) 452, 910, 1028, 1354, 1659, 1861
TseFI GTSAC 5 cut(s) 676, 763, 1216, 1454, 2317
TseI GCWGC 4 cut(s) 491, 596, 2249, 2252
Tsp45I GTSAC 5 cut(s) 676, 763, 1216, 1454, 2317
TspDTI ATGAA 7 cut(s) 225, 455, 686, 1020, 1625, 2288, 2351
TspGWI ACGGA 1 cut(s) 698
TspRI CASTG 6 cut(s) 452, 910, 1028, 1354, 1659, 1861
VneI GTGCAC 1 cut(s) 2045
VpaK11BI GGWCC 3 cut(s) 341, 773, 2371
XagI CCTNNNNNAGG 2 cut(s) 228, 1925
XapI RAATTY 1 cut(s) 1639
XceI RCATGY 3 cut(s) 730, 1057, 2074
XmaJI CCTAGG 1 cut(s) 2354
XmiI GTMKAC 2 cut(s) 543, 1136
XmnI GAANNNNTTC 4 cut(s) 467, 1639, 1785, 1935
XspI CTAG 4 cut(s) 617, 1430, 1535, 2355
ZrmI AGTACT 2 cut(s) 191, 1661
Zsp2I ATGCAT 1 cut(s) 562
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.