RLG00000021039

Belongs to the argonaute family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0001253
Physical Location & Seq
Reverse (-)
71260492 .. 71266636
6145 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021039

Sequence Viewer

Length: 1674 bp
ATGTGTGCAGCTTTGTTTGAAAAAATGGTCATATTTTTTGAGATGGAGGATTTGCCTCCGCCACCTCCTATTGTACCACCGAATATGAAGCCAGAAGTTGTGGCTCTGGCTCCTCCTAAGCACTCTATTATGGTTAGGCCACGTGTGAGTGGAACCACAGGGCGGCGCATACAATTGAGCACTAACCACTTCAAAGTTTCTGTGAAGAATCCAGATGCTGTGTTCTACCAGTACTCTGTTCTGATAACTTATGAAGATAAGAGACCTGTTGAAGGCATGGGACTTGGGAGAAAGCTGGTGGATAAGCTCTATCAAACATACTCTTCAGAGTTTGCTGGTAAAAAGTTTGCATATGATGGGGAGAAAGCTTTATACACAGTCGGTCCTCTCCCACGAAACAAGCTTGAGTTCACAGTTGTTTTGGAGGAGTCATTTACAAAGAGCAACAAAATTGGGAAGTCTGGTGAGACTGATAAAAGGATGAAGCACTGTTCCAATCGGTCGAAAACATTCAATGTAGAGATAAGTTATGCTGCCAAAATACCTTTCAAGTCAATTGCTCTTGCCCTTGAAGGAGCTGAAGTAGACAACACTCAGGATGCATTGAGAGTGCTTGATATTATTCTACGGCAGAAAGCAGCTAAGATGGGATGCCTTCTAGTACGACAGGGGGGCATGTCCTTGAATATGGATGTATCTACAACAATGATTGTGACGCCTGGACCTGTTATTGATTTTCTGTTAACCAACCAGGGTGTACGAGAACCCCGCTACATTGACTGGGTAAAGTCATTTTTGGATCCTACTCACATTAACTCTTGGCTAGCTGTCAACTTCTCCGGACGCTGTGACCTTAGTCAAATCTCTCGGGAGCTTATCAATGTTGGGAAGAAGACTGGAATTCTTGGAGGAATAAATTCTCTCTTGGCACTGGAGTACTCCTCACGTGTTCCTCTTATAAATGATACTCCTACAATGATTTTGGGGATGGATGTGGAGATGATTGATGGTCTATACAAGCCACTTCCAAATGGAAATGATGATGGTATTATCAGGGAACTGCTTCTGGACTTCTATAACACAAGCAAAGGACGCAAACCAACTCAGATCATTGTTTTCAGGGATGGCGTCAGTGAATCACAGTTTAATCAAGTGTTGAACATTGAGCTGGATCAAATTGTAAAGGCTTACCAGCACCTTGGGGAGGAAAATGTTCCAAAGTTCACTCTCATTATAGCTCAAAAGAATCATCACACAAAGCTATTCCAAGCTAATAGCCCTGACAATGTTCCACCAGGGACAGTTGTTGACACAAAAATCGTGCACCCAAGGATCTATGATTTCTACATGTGTGCTCAGGCTGGCATGATTGGAACTTTGAGGCCAGCTCACTATCATGTCTTGCGTGATGAGATTGGCTTTTCCCCTGATGACTTGCAGAACCTGATTCACTCCCTTTCTTATGTGTACCAAAGGAGCTGTACTGCAATATCCATTGTGGCACCCATATGCTATGCGCACCTTGCTGCAGCACAAGTGGGGCAGTTTATGAAGTTTGAAGATCTCTCGGAAACTTCATCAGCTAAAGGTAGTGTCACAACATCAGAGAGCATCCTAGTTCCCGAGCTCCCTAGGCTTCATAGAAAGGTCCAGGGCTCCATGTTCTTCTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0034641 GO:0035194 GO:0035197 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061980 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

558

Amino Acids

62.21

Weight (kDa)

8.42

Isoelectric Point (pI)

36.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgoN PF16486 55 - 209 6.2e-31 N-terminal domain of argonaute
Piwi PF02171 350 - 518 5.3e-68 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 959
Acc16I TGCGCA 1 cut(s) 1518
AccB1I GGYRCC 1 cut(s) 1501
AccI GTMKAC 1 cut(s) 585
AccIII TCCGGA 1 cut(s) 839
AciI CCGC 3 cut(s) 59, 163, 769
AclWI GGATC 4 cut(s) 794, 807, 1179, 1340
AcsI RAATTY 2 cut(s) 900, 916
AcuI CTGAAG 2 cut(s) 309, 600
AcvI CACGTG 2 cut(s) 143, 947
AcyI GRCGYC 2 cut(s) 716, 1128
AfaI GTAC 7 cut(s) 75, 233, 663, 759, 938, 1469, 1483
AfiI CCNNNNNNNGG 3 cut(s) 162, 272, 1204
AflIII ACRYGT 3 cut(s) 142, 946, 1347
AgsI TTSAA 9 cut(s) 20, 193, 272, 514, 550, 572, 685, 1159, 1559
AjnI CCWGG 4 cut(s) 718, 750, 1294, 1650
AjuI GAANNNNNNNTTGG 2 cut(s) 530, 562
Alw21I GWGCWC 4 cut(s) 182, 1326, 1357, 1629
Alw26I GTCTC 2 cut(s) 256, 461
Alw44I GTGCAC 1 cut(s) 1322
AlwI GGATC 4 cut(s) 794, 807, 1179, 1340
AlwNI CAGNNNCTG 2 cut(s) 218, 1444
Ama87I CYCGRG 2 cut(s) 867, 1622
Aor13HI TCCGGA 1 cut(s) 839
AoxI GGCC 2 cut(s) 137, 1382
ApaLI GTGCAC 1 cut(s) 1322
ApeKI GCWGC 5 cut(s) 8, 533, 638, 1526, 1529
ApoI RAATTY 2 cut(s) 900, 916
Asp700I GAANNNNTTC 4 cut(s) 509, 916, 1062, 1212
AspA2I CCTAGG 1 cut(s) 1631
AspLEI GCGC 2 cut(s) 168, 1519
AspS9I GGNCC 3 cut(s) 383, 722, 1648
AsuHPI GGTGA 1 cut(s) 476
AsuNHI GCTAGC 1 cut(s) 823
AvaI CYCGRG 2 cut(s) 867, 1622
AvaII GGWCC 3 cut(s) 383, 722, 1648
AvrII CCTAGG 1 cut(s) 1631
BaeGI GKGCMC 1 cut(s) 1326
BamHI GGATCC 1 cut(s) 799
BanI GGYRCC 1 cut(s) 1501
BanII GRGCYC 2 cut(s) 1629, 1658
BbrPI CACGTG 2 cut(s) 143, 947
BbsI GAAGAC 1 cut(s) 899
Bbv12I GWGCWC 4 cut(s) 182, 1326, 1357, 1629
BbvI GCAGC 5 cut(s) 20, 520, 650, 1513, 1541
BccI CCATC 7 cut(s) 37, 350, 640, 982, 1001, 1037, 1118
BceAI ACGGC 1 cut(s) 644
BciT130I CCWGG 4 cut(s) 720, 752, 1296, 1652
BcoDI GTCTC 2 cut(s) 256, 461
BfaI CTAG 4 cut(s) 659, 824, 1616, 1632
BfmI CTRYAG 1 cut(s) 1527
BglII AGATCT 1 cut(s) 1561
BisI GCNGC 6 cut(s) 9, 164, 534, 639, 1527, 1530
BlnI CCTAGG 1 cut(s) 1631
BlsI GCNGC 6 cut(s) 10, 165, 535, 640, 1528, 1531
BmcAI AGTACT 2 cut(s) 233, 938
Bme1390I CCNGG 4 cut(s) 720, 752, 1296, 1652
Bme18I GGWCC 3 cut(s) 383, 722, 1648
BmeT110I CYCGRG 2 cut(s) 867, 1622
BmgT120I GGNCC 3 cut(s) 383, 722, 1648
BmiI GGNNCC 5 cut(s) 111, 154, 801, 1503, 1657
BmrFI CCNGG 4 cut(s) 720, 752, 1296, 1652
BmrI ACTGGG 1 cut(s) 790
BmsI GCATC 4 cut(s) 205, 589, 641, 1620
BmtI GCTAGC 1 cut(s) 827
BmuI ACTGGG 1 cut(s) 790
BoxI GACNNNNGTC 1 cut(s) 855
BpiI GAAGAC 1 cut(s) 899
BplI GAGNNNNNCTC 4 cut(s) 926, 958, 1372, 1404
BpmI CTGGAG 1 cut(s) 953
Bpu10I CCTNAGC 2 cut(s) 117, 1356
BpuEI CTTGAG 1 cut(s) 425
BsaAI YACGTR 2 cut(s) 143, 947
BsaHI GRCGYC 2 cut(s) 716, 1128
BsaI GGTCTC 1 cut(s) 256
BsaJI CCNNGG 6 cut(s) 751, 1198, 1295, 1328, 1631, 1651
BsaWI WCCGGW 1 cut(s) 839
BsaXI ACNNNNNCTCC 2 cut(s) 567, 597
Bsc4I CCNNNNNNNGG 3 cut(s) 162, 272, 1204
Bse1I ACTGG 4 cut(s) 229, 785, 901, 936
BseAI TCCGGA 1 cut(s) 839
BseBI CCWGG 4 cut(s) 720, 752, 1296, 1652
BseDI CCNNGG 6 cut(s) 751, 1198, 1295, 1328, 1631, 1651
BseGI GGATG 8 cut(s) 486, 604, 656, 697, 993, 997, 1129, 1611
BseLI CCNNNNNNNGG 3 cut(s) 162, 272, 1204
BseMII CTCAG 3 cut(s) 608, 1118, 1370
BseNI ACTGG 4 cut(s) 229, 785, 901, 936
BseRI GAGGAG 3 cut(s) 102, 440, 931
BseSI GKGCMC 1 cut(s) 1326
BseXI GCAGC 5 cut(s) 20, 520, 650, 1513, 1541
BsgI GTGCAG 1 cut(s) 27
Bsh1285I CGRYCG 1 cut(s) 503
BshFI GGCC 2 cut(s) 139, 1384
BshNI GGYRCC 1 cut(s) 1501
BsiEI CGRYCG 1 cut(s) 503
BsiHKAI GWGCWC 4 cut(s) 182, 1326, 1357, 1629
BsiHKCI CYCGRG 2 cut(s) 867, 1622
BsiSI CCGG 1 cut(s) 840
BslFI GGGAC 2 cut(s) 294, 1312
BslI CCNNNNNNNGG 3 cut(s) 162, 272, 1204
BsmAI GTCTC 2 cut(s) 256, 461
BsmFI GGGAC 2 cut(s) 294, 1312
BsnI GGCC 2 cut(s) 139, 1384
Bso31I GGTCTC 1 cut(s) 256
BsoBI CYCGRG 2 cut(s) 867, 1622
Bsp1286I GDGCHC 5 cut(s) 182, 1326, 1357, 1629, 1658
Bsp13I TCCGGA 1 cut(s) 839
Bsp143I GATC 5 cut(s) 799, 1107, 1171, 1332, 1561
BspACI CCGC 3 cut(s) 59, 163, 769
BspANI GGCC 2 cut(s) 139, 1384
BspCNI CTCAG 3 cut(s) 607, 1117, 1369
BspEI TCCGGA 1 cut(s) 839
BspLI GGNNCC 5 cut(s) 111, 154, 801, 1503, 1657
BspMAI CTGCAG 1 cut(s) 1531
BspOI GCTAGC 1 cut(s) 827
BspPI GGATC 4 cut(s) 794, 807, 1179, 1340
BspT107I GGYRCC 1 cut(s) 1501
BspTNI GGTCTC 1 cut(s) 256
BsrI ACTGG 4 cut(s) 229, 785, 901, 936
BssECI CCNNGG 6 cut(s) 751, 1198, 1295, 1328, 1631, 1651
BssMI GATC 5 cut(s) 799, 1107, 1171, 1332, 1561
BssNI GRCGYC 2 cut(s) 716, 1128
BssT1I CCWWGG 3 cut(s) 1198, 1328, 1631
Bst2UI CCWGG 4 cut(s) 720, 752, 1296, 1652
Bst4CI ACNGT 5 cut(s) 379, 415, 491, 1143, 1303
Bst6I CTCTTC 1 cut(s) 328
BstACI GRCGYC 2 cut(s) 716, 1128
BstBAI YACGTR 2 cut(s) 143, 947
BstC8I GCNNGC 3 cut(s) 825, 1363, 1386
BstDEI CTNAG 6 cut(s) 117, 594, 642, 854, 1104, 1356
BstENI CCTNNNNNAGG 2 cut(s) 270, 1202
BstF5I GGATG 8 cut(s) 486, 604, 656, 697, 993, 997, 1129, 1611
BstHHI GCGC 2 cut(s) 168, 1519
BstKTI GATC 5 cut(s) 802, 1110, 1174, 1335, 1564
BstMAI GTCTC 2 cut(s) 256, 461
BstMBI GATC 5 cut(s) 799, 1107, 1171, 1332, 1561
BstMCI CGRYCG 1 cut(s) 503
BstMWI GCNNNNNNNGC 3 cut(s) 1092, 1523, 1633
BstNI CCWGG 4 cut(s) 720, 752, 1296, 1652
BstNSI RCATGY 2 cut(s) 679, 1351
BstPAI GACNNNNGTC 1 cut(s) 855
BstSCI CCNGG 4 cut(s) 718, 750, 1294, 1650
BstSFI CTRYAG 1 cut(s) 1527
BstSLI GKGCMC 1 cut(s) 1326
BstV1I GCAGC 5 cut(s) 20, 520, 650, 1513, 1541
BstV2I GAAGAC 1 cut(s) 899
BstX2I RGATCY 3 cut(s) 799, 1332, 1561
BstXI CCANNNNNNTGG 1 cut(s) 1199
BstYI RGATCY 3 cut(s) 799, 1332, 1561
BsuRI GGCC 2 cut(s) 139, 1384
BtsCI GGATG 8 cut(s) 486, 604, 656, 697, 993, 997, 1129, 1611
BtsIMutI CAGTG 3 cut(s) 487, 929, 1138
Cac8I GCNNGC 3 cut(s) 825, 1363, 1386
CaiI CAGNNNCTG 2 cut(s) 218, 1444
CfoI GCGC 2 cut(s) 168, 1519
Cfr13I GGNCC 3 cut(s) 383, 722, 1648
CseI GACGC 4 cut(s) 724, 852, 1101, 1117
Csp6I GTAC 7 cut(s) 74, 232, 662, 758, 937, 1468, 1482
CviAII CATG 6 cut(s) 277, 676, 1348, 1366, 1397, 1660
CviQI GTAC 7 cut(s) 74, 232, 662, 758, 937, 1468, 1482
DdeI CTNAG 6 cut(s) 117, 594, 642, 854, 1104, 1356
DpnI GATC 5 cut(s) 801, 1109, 1173, 1334, 1563
DpnII GATC 5 cut(s) 799, 1107, 1171, 1332, 1561
Eam1104I CTCTTC 1 cut(s) 328
EarI CTCTTC 1 cut(s) 328
EciI GGCGGA 1 cut(s) 48
Ecl136II GAGCTC 1 cut(s) 1627
Eco130I CCWWGG 3 cut(s) 1198, 1328, 1631
Eco24I GRGCYC 2 cut(s) 1629, 1658
Eco31I GGTCTC 1 cut(s) 256
Eco47I GGWCC 3 cut(s) 383, 722, 1648
Eco53kI GAGCTC 1 cut(s) 1627
Eco57I CTGAAG 2 cut(s) 309, 600
Eco72I CACGTG 2 cut(s) 143, 947
Eco88I CYCGRG 2 cut(s) 867, 1622
EcoICRI GAGCTC 1 cut(s) 1627
EcoNI CCTNNNNNAGG 2 cut(s) 270, 1202
EcoRI GAATTC 1 cut(s) 900
EcoRII CCWGG 4 cut(s) 718, 750, 1294, 1650
EcoT14I CCWWGG 3 cut(s) 1198, 1328, 1631
EcoT22I ATGCAT 1 cut(s) 604
EcoT38I GRGCYC 2 cut(s) 1629, 1658
ErhI CCWWGG 3 cut(s) 1198, 1328, 1631
FaeI CATG 6 cut(s) 280, 679, 1351, 1369, 1400, 1663
FaqI GGGAC 2 cut(s) 294, 1312
FatI CATG 6 cut(s) 276, 675, 1347, 1365, 1396, 1659
FauI CCCGC 1 cut(s) 776
FauNDI CATATG 2 cut(s) 352, 1508
FblI GTMKAC 1 cut(s) 585
Fnu4HI GCNGC 6 cut(s) 9, 164, 534, 639, 1527, 1530
FokI GGATG 8 cut(s) 493, 611, 663, 704, 1000, 1004, 1136, 1598
FriOI GRGCYC 2 cut(s) 1629, 1658
Fsp4HI GCNGC 6 cut(s) 9, 164, 534, 639, 1527, 1530
FspAI RTGCGCAY 1 cut(s) 1518
FspBI CTAG 4 cut(s) 659, 824, 1616, 1632
FspI TGCGCA 1 cut(s) 1518
GlaI GCGC 2 cut(s) 167, 1518
GluI GCNGC 6 cut(s) 9, 164, 534, 639, 1527, 1530
GsuI CTGGAG 1 cut(s) 953
HaeIII GGCC 2 cut(s) 139, 1384
HapII CCGG 1 cut(s) 840
HgaI GACGC 4 cut(s) 724, 852, 1101, 1117
HhaI GCGC 2 cut(s) 168, 1519
Hin1I GRCGYC 2 cut(s) 716, 1128
Hin1II CATG 6 cut(s) 280, 679, 1351, 1369, 1400, 1663
Hin6I GCGC 2 cut(s) 166, 1517
HinP1I GCGC 2 cut(s) 166, 1517
HincII GTYRAC 3 cut(s) 744, 832, 1309
HindII GTYRAC 3 cut(s) 744, 832, 1309
HindIII AAGCTT 2 cut(s) 366, 401
HinfI GANTC 5 cut(s) 208, 428, 1136, 1246, 1447
HpaI GTTAAC 1 cut(s) 744
HpaII CCGG 1 cut(s) 840
HphI GGTGA 1 cut(s) 476
Hpy166II GTNNAC 9 cut(s) 411, 586, 744, 758, 832, 1224, 1309, 1324, 1468
Hpy188I TCNGA 5 cut(s) 243, 328, 1107, 1570, 1606
Hpy188III TCNNGA 6 cut(s) 212, 596, 840, 869, 1067, 1622
Hpy8I GTNNAC 9 cut(s) 411, 586, 744, 758, 832, 1224, 1309, 1324, 1468
HpyAV CCTTC 3 cut(s) 266, 566, 665
HpyCH4III ACNGT 5 cut(s) 379, 415, 491, 1143, 1303
HpyCH4IV ACGT 2 cut(s) 142, 946
HpyCH4V TGCA 7 cut(s) 8, 350, 602, 1324, 1438, 1487, 1529
HpyF10VI GCNNNNNNNGC 3 cut(s) 1092, 1523, 1633
HpyF3I CTNAG 6 cut(s) 117, 594, 642, 854, 1104, 1356
HpySE526I ACGT 2 cut(s) 142, 946
Hsp92I GRCGYC 2 cut(s) 716, 1128
Hsp92II CATG 6 cut(s) 280, 679, 1351, 1369, 1400, 1663
HspAI GCGC 2 cut(s) 166, 1517
Kpn2I TCCGGA 1 cut(s) 839
KspAI GTTAAC 1 cut(s) 744
Kzo9I GATC 5 cut(s) 799, 1107, 1171, 1332, 1561
LmnI GCTCC 6 cut(s) 115, 575, 871, 1476, 1632, 1661
Lsp1109I GCAGC 5 cut(s) 20, 520, 650, 1513, 1541
LweI GCATC 4 cut(s) 205, 589, 641, 1620
MaeI CTAG 4 cut(s) 659, 824, 1616, 1632
MaeII ACGT 2 cut(s) 142, 946
MaeIII GTNAC 3 cut(s) 712, 848, 1594
MalI GATC 5 cut(s) 801, 1109, 1173, 1334, 1563
MboI GATC 5 cut(s) 799, 1107, 1171, 1332, 1561
MboII GAAGA 7 cut(s) 217, 266, 315, 901, 904, 1571, 1657
MfeI CAATTG 2 cut(s) 173, 555
MflI RGATCY 3 cut(s) 799, 1332, 1561
MhlI GDGCHC 5 cut(s) 182, 1326, 1357, 1629, 1658
MluCI AATT 6 cut(s) 173, 450, 555, 900, 916, 1176
MlyI GAGTC 1 cut(s) 437
Mph1103I ATGCAT 1 cut(s) 604
MroI TCCGGA 1 cut(s) 839
MroXI GAANNNNTTC 4 cut(s) 509, 916, 1062, 1212
MseI TTAA 3 cut(s) 743, 813, 1146
MslI CAYNNNNRTG 2 cut(s) 1395, 1507
MspI CCGG 1 cut(s) 840
MspR9I CCNGG 4 cut(s) 720, 752, 1296, 1652
MunI CAATTG 2 cut(s) 173, 555
MvaI CCWGG 4 cut(s) 720, 752, 1296, 1652
MwoI GCNNNNNNNGC 3 cut(s) 1092, 1523, 1633
NdeI CATATG 2 cut(s) 352, 1508
NdeII GATC 5 cut(s) 799, 1107, 1171, 1332, 1561
NheI GCTAGC 1 cut(s) 823
NlaIII CATG 6 cut(s) 280, 679, 1351, 1369, 1400, 1663
NlaIV GGNNCC 5 cut(s) 111, 154, 801, 1503, 1657
NmuCI GTSAC 3 cut(s) 712, 848, 1594
NsbI TGCGCA 1 cut(s) 1518
NsiI ATGCAT 1 cut(s) 604
NspI RCATGY 2 cut(s) 679, 1351
PciI ACATGT 1 cut(s) 1347
PdmI GAANNNNTTC 4 cut(s) 509, 916, 1062, 1212
PfeI GAWTC 4 cut(s) 208, 1136, 1246, 1447
PkrI GCNGC 6 cut(s) 10, 165, 535, 640, 1528, 1531
PleI GAGTC 1 cut(s) 436
PmaCI CACGTG 2 cut(s) 143, 947
PmlI CACGTG 2 cut(s) 143, 947
PpsI GAGTC 1 cut(s) 436
Ppu21I YACGTR 2 cut(s) 143, 947
PscI ACATGT 1 cut(s) 1347
PshAI GACNNNNGTC 1 cut(s) 855
PsiI TTATAA 1 cut(s) 959
Psp124BI GAGCTC 1 cut(s) 1629
Psp6I CCWGG 4 cut(s) 718, 750, 1294, 1650
PspCI CACGTG 2 cut(s) 143, 947
PspGI CCWGG 4 cut(s) 718, 750, 1294, 1650
PspN4I GGNNCC 5 cut(s) 111, 154, 801, 1503, 1657
PspPI GGNCC 3 cut(s) 383, 722, 1648
PstI CTGCAG 1 cut(s) 1531
PstNI CAGNNNCTG 2 cut(s) 218, 1444
PsuI RGATCY 3 cut(s) 799, 1332, 1561
RsaI GTAC 7 cut(s) 75, 233, 663, 759, 938, 1469, 1483
RsaNI GTAC 7 cut(s) 74, 232, 662, 758, 937, 1468, 1482
RseI CAYNNNNRTG 2 cut(s) 1395, 1507
SacI GAGCTC 1 cut(s) 1629
SaqAI TTAA 3 cut(s) 743, 813, 1146
SatI GCNGC 6 cut(s) 9, 164, 534, 639, 1527, 1530
Sau3AI GATC 5 cut(s) 799, 1107, 1171, 1332, 1561
Sau96I GGNCC 3 cut(s) 383, 722, 1648
ScaI AGTACT 2 cut(s) 233, 938
SchI GAGTC 1 cut(s) 437
ScrFI CCNGG 4 cut(s) 720, 752, 1296, 1652
SduI GDGCHC 5 cut(s) 182, 1326, 1357, 1629, 1658
SfaNI GCATC 4 cut(s) 205, 589, 641, 1620
SfcI CTRYAG 1 cut(s) 1527
SinI GGWCC 3 cut(s) 383, 722, 1648
SmiMI CAYNNNNRTG 2 cut(s) 1395, 1507
SmlI CTYRAG 1 cut(s) 404
SmoI CTYRAG 1 cut(s) 404
Sse9I AATT 6 cut(s) 173, 450, 555, 900, 916, 1176
SsiI CCGC 3 cut(s) 59, 163, 769
SspMI CTAG 4 cut(s) 659, 824, 1616, 1632
SstI GAGCTC 1 cut(s) 1629
StyD4I CCNGG 4 cut(s) 718, 750, 1294, 1650
StyI CCWWGG 3 cut(s) 1198, 1328, 1631
TaaI ACNGT 5 cut(s) 379, 415, 491, 1143, 1303
TaiI ACGT 2 cut(s) 145, 949
TaqI TCGA 1 cut(s) 503
TaqII GACCGA 2 cut(s) 371, 489
TasI AATT 6 cut(s) 173, 450, 555, 900, 916, 1176
TatI WGTACW 3 cut(s) 231, 936, 1481
TauI GCSGC 1 cut(s) 166
TfiI GAWTC 4 cut(s) 208, 1136, 1246, 1447
Tru1I TTAA 3 cut(s) 743, 813, 1146
Tru9I TTAA 3 cut(s) 743, 813, 1146
TscAI CASTG 3 cut(s) 494, 936, 1138
TseFI GTSAC 3 cut(s) 712, 848, 1594
TseI GCWGC 5 cut(s) 8, 533, 638, 1526, 1529
Tsp45I GTSAC 3 cut(s) 712, 848, 1594
TspDTI ATGAA 6 cut(s) 101, 267, 497, 1565, 1566, 1628
TspRI CASTG 3 cut(s) 494, 936, 1138
VneI GTGCAC 1 cut(s) 1322
VpaK11BI GGWCC 3 cut(s) 383, 722, 1648
XagI CCTNNNNNAGG 2 cut(s) 270, 1202
XapI RAATTY 2 cut(s) 900, 916
XceI RCATGY 2 cut(s) 679, 1351
XmaJI CCTAGG 1 cut(s) 1631
XmiI GTMKAC 1 cut(s) 585
XmnI GAANNNNTTC 4 cut(s) 509, 916, 1062, 1212
XspI CTAG 4 cut(s) 659, 824, 1616, 1632
ZrmI AGTACT 2 cut(s) 233, 938
Zsp2I ATGCAT 1 cut(s) 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.