Rh2DG553300

Belongs to the argonaute family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0001253
Physical Location & Seq
Reverse (-)
78223227 .. 78228412
5186 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG553300.1

Sequence Viewer

Length: 1653 bp
ATGAAGCACTGTTCCAATCGGTCGAAAACATTCAATGTAGAGATAAGTTATGCTGCCAAAATAACTTTCAAGTCAATTGCTCTTGCCCTTCAAGGAGCTGAAGTAGACAACACTCAGGATGCATTGAGAGTGCTTGATATTATTCTACGGCAGAAAGCAGCTAAGATGGGATGCCTTCTAGTACGACAGTCATTCTTCCATGATGACTCCAGGAACTTTGTTGAGATTGGAGGAGGTGTGACTGGTGTCCGGGGTTTTCATTCCAGTTTCCGTCCAACTCAGGGGGGCATGTCCTTGAATATGGATGTATCTACAACAATGATTGTGACGCCTGGACCTGTTATTGATTTTCTGTTAACCAACCAGGGTGTACGAGAACCCCGCTACATTGACTGGGTAAAGGCCAAAAGAATGCTGAAAAATATGAGGATTACAACGAGACACCGTAACATGGAGTGCAAAATCACTGGGTTGAGTGAGAAGACCTGCAATAATCAGCTGTTTAATCTGAAGCTAAGGAGTGGTGATGGCATGAGTGAGGGGGAAGCTGTGGAGATTACGGTGTATGAATATTTCGTCAAACACTGTGGCATAGAGCTCACCTATTCTCAACACATGCCATGCCTTGATGTTGGCAAGCCAAAGAGGCCCACTTATGTTCCAGTTGAGCTATGTTCACTTGTTTCACTACAAAGGTATACAAAAGCATTATCTTCCCAGCAAAGAGCCTCCTTAGTGGAAAAATCAAGGCAGAAGCCTCTGGAGAGAATAAAGAGTGTGACTGATGCTTTAAGAAATTACCGCTATGATGAGGATCCTGTGCTTGTTGAATGTGGTATATCTATAGAGAAGCAACTGATTCAGATGGATGGCCGTATTCTTGAGACCCCAAAGTTAAAGGTCGGTGGCAATGAGGACATGATGCCCTTTAAGGGACGATGGAACTTCAAAGGAAAGCTGTCAACTTCTCCGGACGCTGTGACCTTAGTCAAATCTCTCGGGAGCTTATCAATGTTGGGAAGAAGACTGGAATTGGAACTGCTTCTGGACTTCTATAACACTAGCAAAGGACGCAAACCAACTCAGATAATTGTTTTCAGGGATGGCGTCAGTGAATCACAGTTTAATCAAGTGTTGAACATTGAGCTCGATCAAATTGTAAAGGCTTACCAGAACCTTGGGGAGGAAAATGTTCCAAAGTTCACTCTCATTATAGCTCAAAAGAATCATCACACAAAGCTATTCCAAGCTAATAGCCCTGACAATGTTCCACCAGGGACAGTTGTTGACACAAAAATCGTGCACCCAAGGATCTATGATTTCTACATGTGTGCTCAGGCTGGCATGATTGGAACTTCGAGGCCAGCTCACTATCATGTCTTGCTTGATGAGATTGGTTTTTCTCCTGATGACTTGCAGAACCTGATTCACTCCCTTTCTTATGTGTACCAAAGGAGCTGTACTGCAATATCCATTGTGGCACCCATATGCTATGCGCACCTTGCTGCAGCACAAGTGGGGCAGTTTATGAAGTTTGAAGATCTCTCGGAAACTTCATCAGCTAAAGGTAGTGTCACAACATCAGAGAGCATCCCAGTTCCCGAGCTCCCTAGGCTTCATAGAAAGGTCCAGGGCTCCATGTTCTTCTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0034641 GO:0035194 GO:0035197 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061980 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

550

Amino Acids

61.82

Weight (kDa)

9.01

Isoelectric Point (pI)

43.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgoL1 PF08699 61 - 109 5.2e-18 Argonaute linker 1 domain
PAZ PF02170 115 - 245 3.1e-29 PAZ domain
ArgoL2 PF16488 255 - 300 1.1e-11 Argonaute linker 2 domain
Piwi PF02171 346 - 511 3.4e-67 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1497
Acc36I ACCTGC 1 cut(s) 494
AccB1I GGYRCC 1 cut(s) 1480
AccI GTMKAC 2 cut(s) 105, 698
AccIII TCCGGA 1 cut(s) 970
AciI CCGC 2 cut(s) 382, 802
AclWI GGATC 3 cut(s) 809, 822, 1319
AcoI YGGCCR 1 cut(s) 871
AcuI CTGAAG 2 cut(s) 120, 530
AcyI GRCGYC 2 cut(s) 329, 1107
AfaI GTAC 4 cut(s) 183, 372, 1448, 1462
AfiI CCNNNNNNNGG 4 cut(s) 281, 451, 932, 1183
AflIII ACRYGT 1 cut(s) 1326
AgsI TTSAA 8 cut(s) 34, 70, 92, 298, 830, 949, 1138, 1538
AjnI CCWGG 5 cut(s) 209, 331, 363, 1273, 1629
AjuI GAANNNNNNNTTGG 2 cut(s) 50, 82
Alw21I GWGCWC 5 cut(s) 600, 1149, 1305, 1336, 1608
Alw26I GTCTC 2 cut(s) 433, 878
Alw44I GTGCAC 1 cut(s) 1301
AlwI GGATC 3 cut(s) 809, 822, 1319
AlwNI CAGNNNCTG 1 cut(s) 1423
Ama87I CYCGRG 2 cut(s) 998, 1601
Aor13HI TCCGGA 1 cut(s) 970
AoxI GGCC 4 cut(s) 402, 647, 871, 1361
ApaLI GTGCAC 1 cut(s) 1301
ApeKI GCWGC 4 cut(s) 53, 158, 1505, 1508
Asp700I GAANNNNTTC 3 cut(s) 29, 1041, 1191
AspA2I CCTAGG 1 cut(s) 1610
AspLEI GCGC 1 cut(s) 1498
AspS9I GGNCC 3 cut(s) 335, 648, 1627
AsuC2I CCSGG 1 cut(s) 251
AsuHPI GGTGA 2 cut(s) 536, 592
AvaI CYCGRG 2 cut(s) 998, 1601
AvaII GGWCC 2 cut(s) 335, 1627
AvrII CCTAGG 1 cut(s) 1610
BaeGI GKGCMC 1 cut(s) 1305
BamHI GGATCC 1 cut(s) 814
BanI GGYRCC 1 cut(s) 1480
BanII GRGCYC 4 cut(s) 600, 1149, 1608, 1637
BbsI GAAGAC 2 cut(s) 488, 1030
Bbv12I GWGCWC 5 cut(s) 600, 1149, 1305, 1336, 1608
BbvI GCAGC 4 cut(s) 40, 170, 1492, 1520
BccI CCATC 6 cut(s) 160, 521, 859, 863, 933, 1097
BceAI ACGGC 2 cut(s) 164, 858
BciT130I CCWGG 5 cut(s) 211, 333, 365, 1275, 1631
BcnI CCSGG 1 cut(s) 251
BcoDI GTCTC 2 cut(s) 433, 878
BfaI CTAG 3 cut(s) 179, 1062, 1611
BfmI CTRYAG 2 cut(s) 843, 1506
BfuAI ACCTGC 1 cut(s) 494
BglI GCCNNNNNGGC 1 cut(s) 646
BglII AGATCT 1 cut(s) 1540
BisI GCNGC 4 cut(s) 54, 159, 1506, 1509
BlnI CCTAGG 1 cut(s) 1610
BlsI GCNGC 4 cut(s) 55, 160, 1507, 1510
Bme1390I CCNGG 6 cut(s) 211, 251, 333, 365, 1275, 1631
Bme18I GGWCC 2 cut(s) 335, 1627
BmeT110I CYCGRG 2 cut(s) 998, 1601
BmgT120I GGNCC 3 cut(s) 335, 648, 1627
BmiI GGNNCC 3 cut(s) 816, 1482, 1636
BmrFI CCNGG 6 cut(s) 211, 251, 333, 365, 1275, 1631
BmrI ACTGGG 3 cut(s) 403, 477, 1589
BmsI GCATC 5 cut(s) 109, 161, 775, 912, 1599
BmuI ACTGGG 3 cut(s) 403, 477, 1589
BoxI GACNNNNGTC 2 cut(s) 245, 986
BpiI GAAGAC 2 cut(s) 488, 1030
BplI GAGNNNNNCTC 2 cut(s) 1351, 1383
BpmI CTGGAG 2 cut(s) 193, 782
Bpu10I CCTNAGC 2 cut(s) 515, 1335
BpuEI CTTGAG 1 cut(s) 902
BpuMI CCSGG 1 cut(s) 251
BsaBI GATNNNNATC 1 cut(s) 813
BsaHI GRCGYC 2 cut(s) 329, 1107
BsaI GGTCTC 1 cut(s) 878
BsaJI CCNNGG 7 cut(s) 250, 364, 1177, 1274, 1307, 1610, 1630
BsaWI WCCGGW 1 cut(s) 970
BsaXI ACNNNNNCTCC 4 cut(s) 87, 117, 222, 252
Bsc4I CCNNNNNNNGG 4 cut(s) 281, 451, 932, 1183
Bse1I ACTGG 7 cut(s) 247, 264, 398, 472, 662, 1032, 1595
Bse3DI GCAATG 1 cut(s) 916
Bse8I GATNNNNATC 1 cut(s) 813
BseAI TCCGGA 1 cut(s) 970
BseBI CCWGG 5 cut(s) 211, 333, 365, 1275, 1631
BseDI CCNNGG 7 cut(s) 250, 364, 1177, 1274, 1307, 1610, 1630
BseGI GGATG 6 cut(s) 124, 176, 310, 874, 1108, 1590
BseJI GATNNNNATC 1 cut(s) 813
BseLI CCNNNNNNNGG 4 cut(s) 281, 451, 932, 1183
BseMI GCAATG 1 cut(s) 916
BseMII CTCAG 4 cut(s) 128, 293, 1097, 1349
BseNI ACTGG 7 cut(s) 247, 264, 398, 472, 662, 1032, 1595
BseRI GAGGAG 1 cut(s) 246
BseSI GKGCMC 1 cut(s) 1305
BseXI GCAGC 4 cut(s) 40, 170, 1492, 1520
BseYI CCCAGC 1 cut(s) 717
Bsh1285I CGRYCG 1 cut(s) 23
BshFI GGCC 4 cut(s) 404, 649, 873, 1363
BshNI GGYRCC 1 cut(s) 1480
BsiEI CGRYCG 1 cut(s) 23
BsiHKAI GWGCWC 5 cut(s) 600, 1149, 1305, 1336, 1608
BsiHKCI CYCGRG 2 cut(s) 998, 1601
BsiSI CCGG 2 cut(s) 250, 971
BslFI GGGAC 2 cut(s) 948, 1291
BslI CCNNNNNNNGG 4 cut(s) 281, 451, 932, 1183
BsmAI GTCTC 2 cut(s) 433, 878
BsmFI GGGAC 2 cut(s) 948, 1291
BsmI GAATGC 1 cut(s) 417
BsnI GGCC 4 cut(s) 404, 649, 873, 1363
Bso31I GGTCTC 1 cut(s) 878
BsoBI CYCGRG 2 cut(s) 998, 1601
Bsp1286I GDGCHC 6 cut(s) 600, 1149, 1305, 1336, 1608, 1637
Bsp13I TCCGGA 1 cut(s) 970
Bsp143I GATC 4 cut(s) 814, 1150, 1311, 1540
BspACI CCGC 2 cut(s) 382, 802
BspANI GGCC 4 cut(s) 404, 649, 873, 1363
BspCNI CTCAG 4 cut(s) 127, 292, 1096, 1348
BspEI TCCGGA 1 cut(s) 970
BspLI GGNNCC 3 cut(s) 816, 1482, 1636
BspMAI CTGCAG 1 cut(s) 1510
BspMI ACCTGC 1 cut(s) 494
BspPI GGATC 3 cut(s) 809, 822, 1319
BspT107I GGYRCC 1 cut(s) 1480
BspTNI GGTCTC 1 cut(s) 878
BsrDI GCAATG 1 cut(s) 916
BsrI ACTGG 7 cut(s) 247, 264, 398, 472, 662, 1032, 1595
BssECI CCNNGG 7 cut(s) 250, 364, 1177, 1274, 1307, 1610, 1630
BssMI GATC 4 cut(s) 814, 1150, 1311, 1540
BssNAI GTATAC 1 cut(s) 699
BssNI GRCGYC 2 cut(s) 329, 1107
BssT1I CCWWGG 3 cut(s) 1177, 1307, 1610
Bst1107I GTATAC 1 cut(s) 699
Bst2UI CCWGG 5 cut(s) 211, 333, 365, 1275, 1631
Bst4CI ACNGT 7 cut(s) 11, 189, 446, 562, 587, 1122, 1282
BstACI GRCGYC 2 cut(s) 329, 1107
BstC8I GCNNGC 3 cut(s) 638, 1342, 1365
BstDEI CTNAG 8 cut(s) 114, 162, 279, 515, 733, 985, 1083, 1335
BstENI CCTNNNNNAGG 1 cut(s) 1181
BstF5I GGATG 6 cut(s) 124, 176, 310, 874, 1108, 1590
BstHHI GCGC 1 cut(s) 1498
BstKTI GATC 4 cut(s) 817, 1153, 1314, 1543
BstMAI GTCTC 2 cut(s) 433, 878
BstMBI GATC 4 cut(s) 814, 1150, 1311, 1540
BstMCI CGRYCG 1 cut(s) 23
BstMWI GCNNNNNNNGC 4 cut(s) 646, 1071, 1502, 1612
BstNI CCWGG 5 cut(s) 211, 333, 365, 1275, 1631
BstNSI RCATGY 3 cut(s) 292, 619, 1330
BstPAI GACNNNNGTC 2 cut(s) 245, 986
BstSCI CCNGG 6 cut(s) 209, 249, 331, 363, 1273, 1629
BstSFI CTRYAG 2 cut(s) 843, 1506
BstSLI GKGCMC 1 cut(s) 1305
BstV1I GCAGC 4 cut(s) 40, 170, 1492, 1520
BstV2I GAAGAC 2 cut(s) 488, 1030
BstX2I RGATCY 3 cut(s) 814, 1311, 1540
BstXI CCANNNNNNTGG 1 cut(s) 1178
BstYI RGATCY 3 cut(s) 814, 1311, 1540
BstZ17I GTATAC 1 cut(s) 699
BsuRI GGCC 4 cut(s) 404, 649, 873, 1363
BtsCI GGATG 6 cut(s) 124, 176, 310, 874, 1108, 1590
BtsIMutI CAGTG 4 cut(s) 7, 465, 583, 1117
BveI ACCTGC 1 cut(s) 494
Cac8I GCNNGC 3 cut(s) 638, 1342, 1365
CaiI CAGNNNCTG 1 cut(s) 1423
CfoI GCGC 1 cut(s) 1498
Cfr13I GGNCC 3 cut(s) 335, 648, 1627
CseI GACGC 4 cut(s) 337, 983, 1080, 1096
Csp6I GTAC 4 cut(s) 182, 371, 1447, 1461
CspCI CAANNNNNGTGG 2 cut(s) 568, 603
CviQI GTAC 4 cut(s) 182, 371, 1447, 1461
DdeI CTNAG 8 cut(s) 114, 162, 279, 515, 733, 985, 1083, 1335
DpnI GATC 4 cut(s) 816, 1152, 1313, 1542
DpnII GATC 4 cut(s) 814, 1150, 1311, 1540
EaeI YGGCCR 1 cut(s) 871
Ecl136II GAGCTC 3 cut(s) 598, 1147, 1606
Eco130I CCWWGG 3 cut(s) 1177, 1307, 1610
Eco24I GRGCYC 4 cut(s) 600, 1149, 1608, 1637
Eco31I GGTCTC 1 cut(s) 878
Eco47I GGWCC 2 cut(s) 335, 1627
Eco53kI GAGCTC 3 cut(s) 598, 1147, 1606
Eco57I CTGAAG 2 cut(s) 120, 530
Eco88I CYCGRG 2 cut(s) 998, 1601
EcoICRI GAGCTC 3 cut(s) 598, 1147, 1606
EcoNI CCTNNNNNAGG 1 cut(s) 1181
EcoRII CCWGG 5 cut(s) 209, 331, 363, 1273, 1629
EcoT14I CCWWGG 3 cut(s) 1177, 1307, 1610
EcoT22I ATGCAT 1 cut(s) 124
EcoT38I GRGCYC 4 cut(s) 600, 1149, 1608, 1637
ErhI CCWWGG 3 cut(s) 1177, 1307, 1610
FaqI GGGAC 2 cut(s) 948, 1291
FauI CCCGC 1 cut(s) 389
FauNDI CATATG 1 cut(s) 1487
FblI GTMKAC 2 cut(s) 105, 698
Fnu4HI GCNGC 4 cut(s) 54, 159, 1506, 1509
FokI GGATG 6 cut(s) 131, 183, 317, 881, 1115, 1577
FriOI GRGCYC 4 cut(s) 600, 1149, 1608, 1637
Fsp4HI GCNGC 4 cut(s) 54, 159, 1506, 1509
FspAI RTGCGCAY 1 cut(s) 1497
FspBI CTAG 3 cut(s) 179, 1062, 1611
FspI TGCGCA 1 cut(s) 1497
GlaI GCGC 1 cut(s) 1497
GluI GCNGC 4 cut(s) 54, 159, 1506, 1509
GsaI CCCAGC 1 cut(s) 721
GsuI CTGGAG 2 cut(s) 193, 782
HaeIII GGCC 4 cut(s) 404, 649, 873, 1363
HapII CCGG 2 cut(s) 250, 971
HgaI GACGC 4 cut(s) 337, 983, 1080, 1096
HhaI GCGC 1 cut(s) 1498
Hin1I GRCGYC 2 cut(s) 329, 1107
Hin6I GCGC 1 cut(s) 1496
HinP1I GCGC 1 cut(s) 1496
HincII GTYRAC 3 cut(s) 357, 963, 1288
HindII GTYRAC 3 cut(s) 357, 963, 1288
HinfI GANTC 5 cut(s) 206, 859, 1115, 1225, 1426
HpaI GTTAAC 1 cut(s) 357
HpaII CCGG 2 cut(s) 250, 971
HphI GGTGA 2 cut(s) 536, 592
Hpy188I TCNGA 5 cut(s) 510, 864, 1086, 1549, 1585
Hpy188III TCNNGA 8 cut(s) 116, 761, 881, 971, 1000, 1046, 1406, 1601
HpyAV CCTTC 2 cut(s) 98, 185
HpyCH4III ACNGT 7 cut(s) 11, 189, 446, 562, 587, 1122, 1282
HpyCH4V TGCA 7 cut(s) 122, 459, 489, 1303, 1417, 1466, 1508
HpyF10VI GCNNNNNNNGC 4 cut(s) 646, 1071, 1502, 1612
HpyF3I CTNAG 8 cut(s) 114, 162, 279, 515, 733, 985, 1083, 1335
Hsp92I GRCGYC 2 cut(s) 329, 1107
HspAI GCGC 1 cut(s) 1496
Kpn2I TCCGGA 1 cut(s) 970
KspAI GTTAAC 1 cut(s) 357
Kzo9I GATC 4 cut(s) 814, 1150, 1311, 1540
LmnI GCTCC 5 cut(s) 95, 1002, 1455, 1611, 1640
Lsp1109I GCAGC 4 cut(s) 40, 170, 1492, 1520
LweI GCATC 5 cut(s) 109, 161, 775, 912, 1599
MaeI CTAG 3 cut(s) 179, 1062, 1611
MaeIII GTNAC 6 cut(s) 238, 325, 446, 778, 979, 1573
MalI GATC 4 cut(s) 816, 1152, 1313, 1542
MboI GATC 4 cut(s) 814, 1150, 1311, 1540
MboII GAAGA 7 cut(s) 187, 493, 705, 1032, 1035, 1550, 1636
MfeI CAATTG 1 cut(s) 75
MflI RGATCY 3 cut(s) 814, 1311, 1540
MhlI GDGCHC 6 cut(s) 600, 1149, 1305, 1336, 1608, 1637
MluCI AATT 5 cut(s) 75, 796, 1031, 1089, 1155
MlyI GAGTC 1 cut(s) 200
MmeI TCCRAC 1 cut(s) 299
Mph1103I ATGCAT 1 cut(s) 124
MroI TCCGGA 1 cut(s) 970
MroXI GAANNNNTTC 3 cut(s) 29, 1041, 1191
MseI TTAA 6 cut(s) 356, 504, 791, 896, 930, 1125
MslI CAYNNNNRTG 2 cut(s) 1374, 1486
MspA1I CMGCKG 1 cut(s) 499
MspI CCGG 2 cut(s) 250, 971
MspR9I CCNGG 6 cut(s) 211, 251, 333, 365, 1275, 1631
MunI CAATTG 1 cut(s) 75
Mva1269I GAATGC 1 cut(s) 417
MvaI CCWGG 5 cut(s) 211, 333, 365, 1275, 1631
MwoI GCNNNNNNNGC 4 cut(s) 646, 1071, 1502, 1612
NciI CCSGG 1 cut(s) 251
NdeI CATATG 1 cut(s) 1487
NdeII GATC 4 cut(s) 814, 1150, 1311, 1540
NlaIV GGNNCC 3 cut(s) 816, 1482, 1636
NmuCI GTSAC 5 cut(s) 238, 325, 778, 979, 1573
NsbI TGCGCA 1 cut(s) 1497
NsiI ATGCAT 1 cut(s) 124
NspI RCATGY 3 cut(s) 292, 619, 1330
PciI ACATGT 1 cut(s) 1326
PctI GAATGC 1 cut(s) 417
PdmI GAANNNNTTC 3 cut(s) 29, 1041, 1191
PfeI GAWTC 4 cut(s) 859, 1115, 1225, 1426
PfoI TCCNGGA 1 cut(s) 209
PkrI GCNGC 4 cut(s) 55, 160, 1507, 1510
PleI GAGTC 1 cut(s) 200
PpsI GAGTC 1 cut(s) 200
PscI ACATGT 1 cut(s) 1326
PshAI GACNNNNGTC 2 cut(s) 245, 986
Psp124BI GAGCTC 3 cut(s) 600, 1149, 1608
Psp6I CCWGG 5 cut(s) 209, 331, 363, 1273, 1629
PspFI CCCAGC 1 cut(s) 717
PspGI CCWGG 5 cut(s) 209, 331, 363, 1273, 1629
PspN4I GGNNCC 3 cut(s) 816, 1482, 1636
PspPI GGNCC 3 cut(s) 335, 648, 1627
PstI CTGCAG 1 cut(s) 1510
PstNI CAGNNNCTG 1 cut(s) 1423
PsuI RGATCY 3 cut(s) 814, 1311, 1540
PvuII CAGCTG 1 cut(s) 499
RsaI GTAC 4 cut(s) 183, 372, 1448, 1462
RsaNI GTAC 4 cut(s) 182, 371, 1447, 1461
RseI CAYNNNNRTG 2 cut(s) 1374, 1486
SacI GAGCTC 3 cut(s) 600, 1149, 1608
SaqAI TTAA 6 cut(s) 356, 504, 791, 896, 930, 1125
SatI GCNGC 4 cut(s) 54, 159, 1506, 1509
Sau3AI GATC 4 cut(s) 814, 1150, 1311, 1540
Sau96I GGNCC 3 cut(s) 335, 648, 1627
SchI GAGTC 1 cut(s) 200
ScrFI CCNGG 6 cut(s) 211, 251, 333, 365, 1275, 1631
SduI GDGCHC 6 cut(s) 600, 1149, 1305, 1336, 1608, 1637
SfaNI GCATC 5 cut(s) 109, 161, 775, 912, 1599
SfcI CTRYAG 2 cut(s) 843, 1506
SinI GGWCC 2 cut(s) 335, 1627
SmiMI CAYNNNNRTG 2 cut(s) 1374, 1486
SmlI CTYRAG 1 cut(s) 881
SmoI CTYRAG 1 cut(s) 881
Sse9I AATT 5 cut(s) 75, 796, 1031, 1089, 1155
SsiI CCGC 2 cut(s) 382, 802
SspI AATATT 1 cut(s) 572
SspMI CTAG 3 cut(s) 179, 1062, 1611
SstI GAGCTC 3 cut(s) 600, 1149, 1608
StyD4I CCNGG 6 cut(s) 209, 249, 331, 363, 1273, 1629
StyI CCWWGG 3 cut(s) 1177, 1307, 1610
TaaI ACNGT 7 cut(s) 11, 189, 446, 562, 587, 1122, 1282
TaqI TCGA 3 cut(s) 23, 1149, 1358
TaqII GACCGA 1 cut(s) 9
TasI AATT 5 cut(s) 75, 796, 1031, 1089, 1155
TatI WGTACW 1 cut(s) 1460
TfiI GAWTC 4 cut(s) 859, 1115, 1225, 1426
Tru1I TTAA 6 cut(s) 356, 504, 791, 896, 930, 1125
Tru9I TTAA 6 cut(s) 356, 504, 791, 896, 930, 1125
TscAI CASTG 4 cut(s) 14, 472, 590, 1117
TseFI GTSAC 5 cut(s) 238, 325, 778, 979, 1573
TseI GCWGC 4 cut(s) 53, 158, 1505, 1508
Tsp45I GTSAC 5 cut(s) 238, 325, 778, 979, 1573
TspDTI ATGAA 6 cut(s) 17, 248, 582, 1544, 1545, 1607
TspGWI ACGGA 1 cut(s) 260
TspRI CASTG 4 cut(s) 14, 472, 590, 1117
VneI GTGCAC 1 cut(s) 1301
VpaK11BI GGWCC 2 cut(s) 335, 1627
XagI CCTNNNNNAGG 1 cut(s) 1181
XceI RCATGY 3 cut(s) 292, 619, 1330
XmaJI CCTAGG 1 cut(s) 1610
XmiI GTMKAC 2 cut(s) 105, 698
XmnI GAANNNNTTC 3 cut(s) 29, 1041, 1191
XspI CTAG 3 cut(s) 179, 1062, 1611
Zsp2I ATGCAT 1 cut(s) 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.