RLG00000021037

Belongs to the argonaute family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0001253
Physical Location & Seq
Reverse (-)
71240927 .. 71246460
5534 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021037

Sequence Viewer

Length: 2178 bp
ATGATGGTAGCTGGTGCCGAAAATGCAGGTGGGGACGAAGATTTGCCCCCACACCCTTCAACCATACCATCCAATTTGAAGCCAGGACTAGTGGCTCCGCCCAAGTATTCTATTATGACTAGGCCATGCAGGACTGGAACTACTGGACGGTGCATAACTTTGCTTGCAAACCACTTCAAAGTTTCAGTGAATAATCCAGATGCTGTATTTTATCAGTATTCTGTATATAATAAGCCAGTTCTTCCAGGGATGGGAATTGGGAAAAAATTGATGGATAGGCTTTATCATACATACTCCATGGAATTTGATGGCAAAAAGTTTGCATATGATGGGGAGAAATCTCTGTACGCATTTGGTCCTCTACCACTGCACAAGCTCAATTACACAGTTGTGCTGGAGGAATCAGTTTCTAGGCCACATGAAATCGGCAGCTCTAGTGTCACTGAAAAATGGATGAAACGATCTATTCAGTCAAAGACTTTCAATGTAGAGATAAGTTATGCTGCCAAAATACCTCTGAAGCCAATTGCTCTTGCCCTTAAAGGAGCTGATGCAGATGATGGTCAAGATGCATTGAGATCATTCTTTCACGATGACTCCAGATGCATCACTGATGTTGGAGGTACCGGTTTAAGTACTGTTCGGGGCTTCCATTCCAGTTTTCGTTCCACTCAAGGTGGCCTGACCTTGAATATGGATGTATCGACTACACTGATATTAACCCCTGGACCAGTGATTGATTTTCTGAAAGCTAACCAGGGTGTACAACACCCCCACAACATTGACTGGGCAAGGGCTAAGAGAATGCTGAAAAATATGAGGATAAAGACAAGACATCACAACATGGAATTCAAAATTACTGGCTTGAGCCAGAATCCCTGTCATGAGCAATATTTTCCTATGAAATTGAGAAGTCATGACGGAACTACTGTGGAGCATACTATGGACATTACTGTATATGAGTATTTCACCAAACATCGTGGCATAGAACTTACCTATTCTGCATACTTTCCATGCCTTGATGTTGGCAAGCCAAAAAGGCCTAACTATGTGCCACTCGAGCTTTGTTCCCTTGTTTCCCTCCAACGGTATAAAAAAGCATTATCTTCAAAGCAGAGAGCTTCTATAGTTGGAAGTTCAAGGCAGAGGCCTCAGGAGAGAATAAACAGTGTGACTAATGCTGTAAGGAATTATGGCTATAATGACGATCCTGTGCTTGCTGCATGTGGTATATCCATAGAGAAGCAATTGACTCAGATTGAAGGTCGTGTACTTGAGGCTCCGAAGTTGAAGGTAGGCAACAGTTCCTATTGTATGCCTTCAGATGGGAGATGGAACTTCAATGGCAAGACATTTTTGAACCCTAAACACATTGACAAATGGATTGTTGTCAACTTCTCTTTGGAAAATTGTGATACTAGTCGCATCTCAAGGCAGCTTTGTGACATTGGGAGGAAGAAGGGCATTGTAGGACCGTGGAAGAAAGAGTGCCTTGTTGACTATGGCATTGTCACACAGTGCATTTCCCCTCCCATGAAAAAAAAATACAAGGGAGAGAGACTTGGAGGAATAAATTCTTGGTTGGCAACAGAACACTCTGGATCGCATGGGCCTCCTGGTCGATCAGATATTCCTTCTGTTGCTGCGGCTTACAAGCACCACCAGAAGGTTGATGAGCTTCCAATATTTACTGTGATTGTGGCTCAAAAGAACCATAATACAAAGCTATTCCAAGCTGGTTCTCCCCAGTATAATGTTCCACCAGGAACAGTTGTGGACACAAATATTGTGCATCCAAGGAATTATGATTTCTATATGTGTGCTCACAAAGGCTCCATTGGAACTTCGAGGCCAGCACACTATCATGTCTTGCTCATTGAGATTGGCTTTTCTGCCAATGAACTGCAAAACCTGATCCACTCTCTTTCCTATGTGTACCAGAGGAGTACAACTGCATTGCTTCCCATATGTTATGCACACCTTGCTGCAGCACAAGTAATGCAGTTTATGAAGTTTGAAGATCTCTCGGAAACTTCATCATCAGGAAGGGTCAGTGTCACTACATCAGAGAGTATCCCAGTGCCTGAGCTCCCTAGGCTTCATGAGAAGGTCCGCGGTGGCATTCAACTTCAACTTCTTGTCACTGGTCTCTCTGCCTTGGCCTGTTTTACTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006325 GO:0006342 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0034641 GO:0035194 GO:0035197 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061980 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

726

Amino Acids

80.69

Weight (kDa)

9.26

Isoelectric Point (pI)

39.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgoN PF16486 52 - 193 5.6e-20 N-terminal domain of argonaute
ArgoL1 PF08699 193 - 239 9.5e-14 Argonaute linker 1 domain
PAZ PF02170 246 - 376 1.9e-30 PAZ domain
ArgoL2 PF16488 386 - 431 1.2e-14 Argonaute linker 2 domain
Piwi PF02171 550 - 671 6.9e-37 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 17
Acc36I ACCTGC 1 cut(s) 17
Acc65I GGTACC 1 cut(s) 623
AccB1I GGYRCC 2 cut(s) 14, 623
AccII CGCG 1 cut(s) 2115
AciI CCGC 4 cut(s) 98, 1646, 2113, 2115
AclWI GGATC 3 cut(s) 1202, 1609, 1909
AcsI RAATTY 3 cut(s) 302, 848, 1573
AcuI CTGAAG 2 cut(s) 539, 1305
AdeI CACNNNGTG 1 cut(s) 1518
AfaI GTAC 7 cut(s) 347, 625, 637, 765, 1272, 1937, 1948
AfiI CCNNNNNNNGG 4 cut(s) 251, 1086, 1325, 1666
AgeI ACCGGT 1 cut(s) 626
AhlI ACTAGT 2 cut(s) 88, 1418
AjnI CCWGG 6 cut(s) 82, 244, 724, 756, 1615, 1762
AjuI GAANNNNNNNTTGG 2 cut(s) 1561, 1593
AleI CACNNNNGTG 1 cut(s) 389
Alw21I GWGCWC 2 cut(s) 1825, 2091
Alw26I GTCTC 2 cut(s) 1552, 2153
AlwI GGATC 3 cut(s) 1202, 1609, 1909
AlwNI CAGNNNCTG 2 cut(s) 203, 2084
Ama87I CYCGRG 1 cut(s) 1058
AoxI GGCC 8 cut(s) 122, 413, 679, 1040, 1148, 1610, 1850, 2160
ApeKI GCWGC 7 cut(s) 429, 503, 1220, 1435, 1643, 1985, 1988
ApoI RAATTY 3 cut(s) 302, 848, 1573
AsiGI ACCGGT 1 cut(s) 626
Asp700I GAANNNNTTC 1 cut(s) 1573
Asp718I GGTACC 1 cut(s) 623
AspA2I CCTAGG 1 cut(s) 2093
AspS9I GGNCC 5 cut(s) 356, 728, 1472, 1610, 2110
AsuHPI GGTGA 1 cut(s) 961
AvaI CYCGRG 1 cut(s) 1058
AvaII GGWCC 4 cut(s) 356, 728, 1472, 2110
AvrII CCTAGG 1 cut(s) 2093
AxyI CCTNAGG 1 cut(s) 1152
BanI GGYRCC 2 cut(s) 14, 623
BanII GRGCYC 1 cut(s) 2091
BarI GAAGNNNNNNTAC 2 cut(s) 1254, 1286
Bbv12I GWGCWC 2 cut(s) 1825, 2091
BbvI GCAGC 7 cut(s) 441, 490, 1207, 1447, 1630, 1972, 2000
BccI CCATC 8 cut(s) 76, 244, 265, 302, 323, 554, 1319, 1326
BciT130I CCWGG 6 cut(s) 84, 246, 726, 758, 1617, 1764
BciVI GTATCC 1 cut(s) 2084
BcoDI GTCTC 2 cut(s) 1552, 2153
BcuI ACTAGT 2 cut(s) 88, 1418
BfaI CTAG 6 cut(s) 89, 120, 411, 435, 1419, 2094
BfmI CTRYAG 2 cut(s) 1125, 1986
BfuAI ACCTGC 1 cut(s) 17
BfuI GTATCC 1 cut(s) 2084
BglI GCCNNNNNGGC 1 cut(s) 1039
BglII AGATCT 1 cut(s) 2020
BisI GCNGC 8 cut(s) 430, 504, 1221, 1436, 1644, 1647, 1986, 1989
BlnI CCTAGG 1 cut(s) 2093
BlsI GCNGC 8 cut(s) 431, 505, 1222, 1437, 1645, 1648, 1987, 1990
BmcAI AGTACT 1 cut(s) 637
Bme1390I CCNGG 6 cut(s) 84, 246, 726, 758, 1617, 1764
Bme18I GGWCC 4 cut(s) 356, 728, 1472, 2110
BmeT110I CYCGRG 1 cut(s) 1058
BmgT120I GGNCC 5 cut(s) 356, 728, 1472, 1610, 2110
BmiI GGNNCC 5 cut(s) 16, 96, 625, 1281, 1834
BmrFI CCNGG 6 cut(s) 84, 246, 726, 758, 1617, 1764
BmrI ACTGGG 3 cut(s) 796, 1741, 2072
BmsI GCATC 7 cut(s) 190, 541, 559, 593, 615, 1434, 1801
BmuI ACTGGG 3 cut(s) 796, 1741, 2072
BpmI CTGGAG 2 cut(s) 416, 583
Bpu10I CCTNAGC 1 cut(s) 2085
BpuEI CTTGAG 4 cut(s) 657, 886, 1295, 1414
BsaI GGTCTC 1 cut(s) 2153
BsaJI CCNNGG 9 cut(s) 245, 297, 724, 757, 1475, 1796, 2093, 2113, 2157
BsaWI WCCGGW 1 cut(s) 626
BsaXI ACNNNNNCTCC 4 cut(s) 581, 611, 1817, 1847
Bsc4I CCNNNNNNNGG 4 cut(s) 251, 1086, 1325, 1666
Bse118I RCCGGY 1 cut(s) 626
Bse21I CCTNAGG 1 cut(s) 1152
Bse3DI GCAATG 1 cut(s) 1955
BseBI CCWGG 6 cut(s) 84, 246, 726, 758, 1617, 1764
BseDI CCNNGG 9 cut(s) 245, 297, 724, 757, 1475, 1796, 2093, 2113, 2157
BseGI GGATG 5 cut(s) 68, 255, 459, 703, 1792
BseLI CCNNNNNNNGG 4 cut(s) 251, 1086, 1325, 1666
BseMI GCAATG 1 cut(s) 1955
BseMII CTCAG 3 cut(s) 1166, 1268, 2076
BseRI GAGGAG 1 cut(s) 1957
BseXI GCAGC 7 cut(s) 441, 490, 1207, 1447, 1630, 1972, 2000
BsgI GTGCAG 1 cut(s) 353
Bsh1236I CGCG 1 cut(s) 2115
BshFI GGCC 8 cut(s) 124, 415, 681, 1042, 1150, 1612, 1852, 2162
BshNI GGYRCC 2 cut(s) 14, 623
BshTI ACCGGT 1 cut(s) 626
BsiHKAI GWGCWC 2 cut(s) 1825, 2091
BsiHKCI CYCGRG 1 cut(s) 1058
BsiSI CCGG 1 cut(s) 627
BslFI GGGAC 1 cut(s) 47
BslI CCNNNNNNNGG 4 cut(s) 251, 1086, 1325, 1666
BsmAI GTCTC 2 cut(s) 1552, 2153
BsmFI GGGAC 1 cut(s) 47
BsmI GAATGC 2 cut(s) 810, 2121
BsnI GGCC 8 cut(s) 124, 415, 681, 1042, 1150, 1612, 1852, 2162
Bso31I GGTCTC 1 cut(s) 2153
BsoBI CYCGRG 1 cut(s) 1058
Bsp1286I GDGCHC 2 cut(s) 1825, 2091
Bsp1407I TGTACA 1 cut(s) 763
Bsp143I GATC 7 cut(s) 461, 578, 1207, 1601, 1622, 1914, 2020
Bsp19I CCATGG 1 cut(s) 297
BspACI CCGC 4 cut(s) 98, 1646, 2113, 2115
BspANI GGCC 8 cut(s) 124, 415, 681, 1042, 1150, 1612, 1852, 2162
BspCNI CTCAG 3 cut(s) 1165, 1267, 2077
BspFNI CGCG 1 cut(s) 2115
BspHI TCATGA 3 cut(s) 883, 916, 2101
BspLI GGNNCC 5 cut(s) 16, 96, 625, 1281, 1834
BspMAI CTGCAG 1 cut(s) 1990
BspMI ACCTGC 1 cut(s) 17
BspPI GGATC 3 cut(s) 1202, 1609, 1909
BspT107I GGYRCC 2 cut(s) 14, 623
BspTNI GGTCTC 1 cut(s) 2153
BsrDI GCAATG 1 cut(s) 1955
BsrFI RCCGGY 1 cut(s) 626
BsrGI TGTACA 1 cut(s) 763
BssAI RCCGGY 1 cut(s) 626
BssECI CCNNGG 9 cut(s) 245, 297, 724, 757, 1475, 1796, 2093, 2113, 2157
BssMI GATC 7 cut(s) 461, 578, 1207, 1601, 1622, 1914, 2020
BssT1I CCWWGG 4 cut(s) 297, 1796, 2093, 2157
Bst2UI CCWGG 6 cut(s) 84, 246, 726, 758, 1617, 1764
BstAPI GCANNNNNTGC 1 cut(s) 1982
BstAUI TGTACA 1 cut(s) 763
BstC8I GCNNGC 4 cut(s) 165, 1031, 1218, 1854
BstDEI CTNAG 4 cut(s) 798, 1152, 1254, 2085
BstDSI CCRYGG 3 cut(s) 297, 1475, 2113
BstF5I GGATG 5 cut(s) 68, 255, 459, 703, 1792
BstFNI CGCG 1 cut(s) 2115
BstKTI GATC 7 cut(s) 464, 581, 1210, 1604, 1625, 1917, 2023
BstMAI GTCTC 2 cut(s) 1552, 2153
BstMBI GATC 7 cut(s) 461, 578, 1207, 1601, 1622, 1914, 2020
BstMWI GCNNNNNNNGC 5 cut(s) 23, 1039, 1060, 1982, 2095
BstNI CCWGG 6 cut(s) 84, 246, 726, 758, 1617, 1764
BstNSI RCATGY 1 cut(s) 1227
BstSCI CCNGG 6 cut(s) 82, 244, 724, 756, 1615, 1762
BstSFI CTRYAG 2 cut(s) 1125, 1986
BstUI CGCG 1 cut(s) 2115
BstV1I GCAGC 7 cut(s) 441, 490, 1207, 1447, 1630, 1972, 2000
BstX2I RGATCY 1 cut(s) 2020
BstYI RGATCY 1 cut(s) 2020
Bsu36I CCTNAGG 1 cut(s) 1152
BsuI GTATCC 1 cut(s) 2084
BsuRI GGCC 8 cut(s) 124, 415, 681, 1042, 1150, 1612, 1852, 2162
BtgI CCRYGG 3 cut(s) 297, 1475, 2113
BtsCI GGATG 5 cut(s) 68, 255, 459, 703, 1792
BtsI GCAGTG 1 cut(s) 365
BveI ACCTGC 1 cut(s) 17
Cac8I GCNNGC 4 cut(s) 165, 1031, 1218, 1854
CaiI CAGNNNCTG 2 cut(s) 203, 2084
CciI TCATGA 3 cut(s) 883, 916, 2101
Cfr10I RCCGGY 1 cut(s) 626
Cfr13I GGNCC 5 cut(s) 356, 728, 1472, 1610, 2110
Cfr42I CCGCGG 1 cut(s) 2116
Csp6I GTAC 7 cut(s) 346, 624, 636, 764, 1271, 1936, 1947
CspAI ACCGGT 1 cut(s) 626
CspCI CAANNNNNGTGG 2 cut(s) 961, 996
CviQI GTAC 7 cut(s) 346, 624, 636, 764, 1271, 1936, 1947
DdeI CTNAG 4 cut(s) 798, 1152, 1254, 2085
DpnI GATC 7 cut(s) 463, 580, 1209, 1603, 1624, 1916, 2022
DpnII GATC 7 cut(s) 461, 578, 1207, 1601, 1622, 1914, 2020
DraIII CACNNNGTG 1 cut(s) 1518
EciI GGCGGA 1 cut(s) 87
Ecl136II GAGCTC 1 cut(s) 2089
Eco130I CCWWGG 4 cut(s) 297, 1796, 2093, 2157
Eco147I AGGCCT 2 cut(s) 1042, 1150
Eco24I GRGCYC 1 cut(s) 2091
Eco31I GGTCTC 1 cut(s) 2153
Eco47I GGWCC 4 cut(s) 356, 728, 1472, 2110
Eco53kI GAGCTC 1 cut(s) 2089
Eco57I CTGAAG 2 cut(s) 539, 1305
Eco81I CCTNAGG 1 cut(s) 1152
Eco88I CYCGRG 1 cut(s) 1058
EcoICRI GAGCTC 1 cut(s) 2089
EcoRI GAATTC 1 cut(s) 848
EcoRII CCWGG 6 cut(s) 82, 244, 724, 756, 1615, 1762
EcoT14I CCWWGG 4 cut(s) 297, 1796, 2093, 2157
EcoT22I ATGCAT 2 cut(s) 574, 608
EcoT38I GRGCYC 1 cut(s) 2091
ErhI CCWWGG 4 cut(s) 297, 1796, 2093, 2157
FalI AAGNNNNNCTT 2 cut(s) 1476, 1508
FaqI GGGAC 1 cut(s) 47
FauNDI CATATG 2 cut(s) 325, 1967
Fnu4HI GCNGC 8 cut(s) 430, 504, 1221, 1436, 1644, 1647, 1986, 1989
FokI GGATG 5 cut(s) 55, 262, 466, 710, 1779
FriOI GRGCYC 1 cut(s) 2091
Fsp4HI GCNGC 8 cut(s) 430, 504, 1221, 1436, 1644, 1647, 1986, 1989
FspBI CTAG 6 cut(s) 89, 120, 411, 435, 1419, 2094
GluI GCNGC 8 cut(s) 430, 504, 1221, 1436, 1644, 1647, 1986, 1989
GsuI CTGGAG 2 cut(s) 416, 583
HaeIII GGCC 8 cut(s) 124, 415, 681, 1042, 1150, 1612, 1852, 2162
HapII CCGG 1 cut(s) 627
HincII GTYRAC 2 cut(s) 1393, 1498
HindII GTYRAC 2 cut(s) 1393, 1498
HinfI GANTC 4 cut(s) 401, 596, 874, 1252
HpaII CCGG 1 cut(s) 627
HphI GGTGA 1 cut(s) 961
Hpy166II GTNNAC 6 cut(s) 764, 1271, 1393, 1498, 1777, 1936
Hpy188I TCNGA 8 cut(s) 519, 747, 1257, 1284, 1324, 1627, 2029, 2068
Hpy8I GTNNAC 6 cut(s) 764, 1271, 1393, 1498, 1777, 1936
HpyAV CCTTC 9 cut(s) 66, 1256, 1285, 1329, 1453, 1644, 1660, 2040, 2101
HpyF10VI GCNNNNNNNGC 5 cut(s) 23, 1039, 1060, 1982, 2095
HpyF3I CTNAG 4 cut(s) 798, 1152, 1254, 2085
KpnI GGTACC 1 cut(s) 627
KspI CCGCGG 1 cut(s) 2116
Kzo9I GATC 7 cut(s) 461, 578, 1207, 1601, 1622, 1914, 2020
LmnI GCTCC 6 cut(s) 100, 545, 934, 1285, 1838, 2094
Lsp1109I GCAGC 7 cut(s) 441, 490, 1207, 1447, 1630, 1972, 2000
LweI GCATC 7 cut(s) 190, 541, 559, 593, 615, 1434, 1801
MaeI CTAG 6 cut(s) 89, 120, 411, 435, 1419, 2094
MaeIII GTNAC 6 cut(s) 439, 1171, 1442, 1510, 2056, 2140
MalI GATC 7 cut(s) 463, 580, 1209, 1603, 1624, 1916, 2022
MboI GATC 7 cut(s) 461, 578, 1207, 1601, 1622, 1914, 2020
MboII GAAGA 6 cut(s) 50, 233, 1098, 1468, 1492, 2030
MfeI CAATTG 2 cut(s) 525, 1247
MflI RGATCY 1 cut(s) 2020
MhlI GDGCHC 2 cut(s) 1825, 2091
MlyI GAGTC 2 cut(s) 590, 1246
MmeI TCCRAC 3 cut(s) 598, 1108, 1111
Mph1103I ATGCAT 2 cut(s) 574, 608
MroXI GAANNNNTTC 1 cut(s) 1573
MseI TTAA 4 cut(s) 540, 632, 719, 2176
MslI CAYNNNNRTG 2 cut(s) 389, 1863
MspA1I CMGCKG 1 cut(s) 2115
MspI CCGG 1 cut(s) 627
MspR9I CCNGG 6 cut(s) 84, 246, 726, 758, 1617, 1764
MunI CAATTG 2 cut(s) 525, 1247
Mva1269I GAATGC 2 cut(s) 810, 2121
MvaI CCWGG 6 cut(s) 84, 246, 726, 758, 1617, 1764
MvnI CGCG 1 cut(s) 2115
MwoI GCNNNNNNNGC 5 cut(s) 23, 1039, 1060, 1982, 2095
NcoI CCATGG 1 cut(s) 297
NdeI CATATG 2 cut(s) 325, 1967
NdeII GATC 7 cut(s) 461, 578, 1207, 1601, 1622, 1914, 2020
NlaIV GGNNCC 5 cut(s) 16, 96, 625, 1281, 1834
NmuCI GTSAC 6 cut(s) 439, 1171, 1442, 1510, 2056, 2140
NsiI ATGCAT 2 cut(s) 574, 608
NspI RCATGY 1 cut(s) 1227
OliI CACNNNNGTG 1 cut(s) 389
PaeR7I CTCGAG 1 cut(s) 1058
PagI TCATGA 3 cut(s) 883, 916, 2101
PaqCI CACCTGC 1 cut(s) 17
PceI AGGCCT 2 cut(s) 1042, 1150
PctI GAATGC 2 cut(s) 810, 2121
PdmI GAANNNNTTC 1 cut(s) 1573
PfeI GAWTC 2 cut(s) 401, 874
PinAI ACCGGT 1 cut(s) 626
PkrI GCNGC 8 cut(s) 431, 505, 1222, 1437, 1645, 1648, 1987, 1990
PleI GAGTC 2 cut(s) 590, 1246
PpsI GAGTC 2 cut(s) 590, 1246
Psp124BI GAGCTC 1 cut(s) 2091
Psp6I CCWGG 6 cut(s) 82, 244, 724, 756, 1615, 1762
PspGI CCWGG 6 cut(s) 82, 244, 724, 756, 1615, 1762
PspN4I GGNNCC 5 cut(s) 16, 96, 625, 1281, 1834
PspPI GGNCC 5 cut(s) 356, 728, 1472, 1610, 2110
PspXI VCTCGAGB 1 cut(s) 1058
PstI CTGCAG 1 cut(s) 1990
PstNI CAGNNNCTG 2 cut(s) 203, 2084
PsuI RGATCY 1 cut(s) 2020
RsaI GTAC 7 cut(s) 347, 625, 637, 765, 1272, 1937, 1948
RsaNI GTAC 7 cut(s) 346, 624, 636, 764, 1271, 1936, 1947
RseI CAYNNNNRTG 2 cut(s) 389, 1863
SacI GAGCTC 1 cut(s) 2091
SacII CCGCGG 1 cut(s) 2116
SaqAI TTAA 4 cut(s) 540, 632, 719, 2176
SatI GCNGC 8 cut(s) 430, 504, 1221, 1436, 1644, 1647, 1986, 1989
Sau3AI GATC 7 cut(s) 461, 578, 1207, 1601, 1622, 1914, 2020
Sau96I GGNCC 5 cut(s) 356, 728, 1472, 1610, 2110
ScaI AGTACT 1 cut(s) 637
SchI GAGTC 2 cut(s) 590, 1246
ScrFI CCNGG 6 cut(s) 84, 246, 726, 758, 1617, 1764
SduI GDGCHC 2 cut(s) 1825, 2091
SfaNI GCATC 7 cut(s) 190, 541, 559, 593, 615, 1434, 1801
SfcI CTRYAG 2 cut(s) 1125, 1986
Sfr274I CTCGAG 1 cut(s) 1058
Sfr303I CCGCGG 1 cut(s) 2116
SgrBI CCGCGG 1 cut(s) 2116
SinI GGWCC 4 cut(s) 356, 728, 1472, 2110
SlaI CTCGAG 1 cut(s) 1058
SmiMI CAYNNNNRTG 2 cut(s) 389, 1863
SmlI CTYRAG 5 cut(s) 672, 865, 1058, 1274, 1429
SmoI CTYRAG 5 cut(s) 672, 865, 1058, 1274, 1429
SpeI ACTAGT 2 cut(s) 88, 1418
SseBI AGGCCT 2 cut(s) 1042, 1150
SsiI CCGC 4 cut(s) 98, 1646, 2113, 2115
SspI AATATT 3 cut(s) 893, 1686, 1786
SspMI CTAG 6 cut(s) 89, 120, 411, 435, 1419, 2094
SstI GAGCTC 1 cut(s) 2091
StuI AGGCCT 2 cut(s) 1042, 1150
StyD4I CCNGG 6 cut(s) 82, 244, 724, 756, 1615, 1762
StyI CCWWGG 4 cut(s) 297, 1796, 2093, 2157
TaqI TCGA 4 cut(s) 704, 1059, 1621, 1847
TatI WGTACW 4 cut(s) 635, 763, 1270, 1946
TauI GCSGC 1 cut(s) 1649
TfiI GAWTC 2 cut(s) 401, 874
Tru1I TTAA 4 cut(s) 540, 632, 719, 2176
Tru9I TTAA 4 cut(s) 540, 632, 719, 2176
TseFI GTSAC 6 cut(s) 439, 1171, 1442, 1510, 2056, 2140
TseI GCWGC 7 cut(s) 429, 503, 1220, 1435, 1643, 1985, 1988
Tsp45I GTSAC 6 cut(s) 439, 1171, 1442, 1510, 2056, 2140
TspDTI ATGAA 8 cut(s) 435, 470, 917, 1550, 1914, 2024, 2025, 2090
TspGWI ACGGA 1 cut(s) 936
VpaK11BI GGWCC 4 cut(s) 356, 728, 1472, 2110
XapI RAATTY 3 cut(s) 302, 848, 1573
XceI RCATGY 1 cut(s) 1227
XhoI CTCGAG 1 cut(s) 1058
XmaJI CCTAGG 1 cut(s) 2093
XmnI GAANNNNTTC 1 cut(s) 1573
XspI CTAG 6 cut(s) 89, 120, 411, 435, 1419, 2094
ZrmI AGTACT 1 cut(s) 637
Zsp2I ATGCAT 2 cut(s) 574, 608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.