AT3G18180

transferring glycosyl groups

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0001096
Physical Location & Seq
Forward (+)
6230270 .. 6231878
1609 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G18180.1

Sequence Viewer

Length: 1413 bp
ATGACAAAGAAGGATATTCTTTACGATACAGTACTTGCTCGTAGTTTTAGCAAAACTGATCAGAAGAGACTTTGCTGTGGAGCTTTCATTGCCTCTCTTCTCTTGGTCCTCACTCTTTGCACTGTCGTTAAACCTTATCTCAGCCCTTTACCAATCGTGGAGTTACAGTTATCAGTTGGCACTGGTCTAAGGATGCTGAGTATAACAGAATTAACTACCAACACTACAATCTCCAAAGAAGAAGTTATTTCAGAGTGCAATAAAATGGAGAAACCTATCTGTCACTGTAACACACTAGGAAGCAAAGAGTTTTGCGATGTAAGCGGCGACGTAAGAATCCATGGTAAATCCGCAACTGTTCTTGCGGCGGTCACGTTTGCGTTTTCCGGGAATTCCACGTGGTATATGAGACCTTATGCGAGAAAAGACCAAGTTCCTGCCATGAAACGCGTGAGAGAATGGACGGTGAAATTAGTACAAAACGCTAGTTTATCACGCTGCGTTAGGAATCACAGCGTTCCGGCGATTCTTTTCTCTCTCGGAGGCTTCTCGTTGAACAATTTCCATGATTTCACGGACATCGTGATTCCTCTGTACACGACGGCGCGTAGATTCAGCGGTGAAGTTCAGTTCCTCGTGACGAACAAGAATCTTTTGTGGATCAACAAATTTAAGGAATTAGTGAGGAAACTCTCTAATTACGAAGTGATTTACATCGACGAAGAAGACGAAACGCATTGTTTCAGCAGCGTCATCGTTGGTCTCAATCGCCACCGTGATTATGACAAAGAGCTAACGACTGATCCTTCGAATTCGGAGTATTCAATGTCCGATTTCCGGAAATTCCTCAGAGACACATACTCATTGAGAAACTCCGCCGTGACTACGAGGCGGAAGCCACGGATTCTGATTTTGTCTAGGAGCAGATCGCGAGCGTTTGTGAACGCGGGTGAAATCGCTAGAGCGGCGAGACAAATCGGATTTAAAGTCGTGGTGGCGGAAGCAAACACGGAAATCGCGAGTTTCGCAATAACTGTGAACTCCTGTGACGTGATGCTCGGCGTTCACGGCGCGGGGATGACGAACATGGTGTTCTTACCTGATAACGCGATCGTGATTCAGATTCTTCCGATCGGTGGATTCGAGTGGCTTGCAAAGATGGATTTCGAGTATCCGTCGAAGGGCATGAATCTGAGGTATTTGGAGTACAAGATCACGGCGGAGGAGAGCACACTGGTGAAGCAGTACGGACGCGATCACGAGTTCGTTAGAGATCCATTGGCCGTTGCAAAACGCGGGTGGGGAACTTTCAAGTCGGTTTATTTGGTACAGCAGAACGTTAGCGTTGATATAAACCGGTTCAAGCTGGTTCTTGTCAAAGCTCTTGAGCTATTGCATAATCAGTCAGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00514 ko00515 ko01100 map00514 map00515 map01100
Pfam Domains
Protein Families
DUF563

Protein Analysis

470

Amino Acids

53.19

Weight (kDa)

9.19

Isoelectric Point (pI)

36.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_61 PF04577 274 - 373 8.4e-12 Glycosyltransferase 61
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 965
AccII CGCG 9 cut(s) 450, 607, 931, 947, 1019, 1073, 1109, 1254, 1296
AccIII TCCGGA 1 cut(s) 837
AclI AACGTT 1 cut(s) 1338
AclWI GGATC 3 cut(s) 668, 797, 1268
AcoI YGGCCR 1 cut(s) 1281
AcsI RAATTY 4 cut(s) 391, 668, 811, 842
AcvI CACGTG 1 cut(s) 399
AfaI GTAC 6 cut(s) 33, 477, 596, 1208, 1247, 1329
AfiI CCNNNNNNNGG 3 cut(s) 837, 1136, 1181
AflIII ACRYGT 1 cut(s) 448
AgeI ACCGGT 1 cut(s) 1356
AgsI TTSAA 4 cut(s) 556, 825, 1312, 1363
AjiI CACGTC 1 cut(s) 1051
AleI CACNNNNGTG 1 cut(s) 1235
AluBI AGCT 5 cut(s) 83, 793, 1366, 1382, 1390
AluI AGCT 5 cut(s) 83, 793, 1366, 1382, 1390
Alw21I GWGCWC 1 cut(s) 1232
Alw26I GTCTC 5 cut(s) 61, 403, 767, 846, 964
AlwI GGATC 3 cut(s) 668, 797, 1268
Aor13HI TCCGGA 1 cut(s) 837
AoxI GGCC 1 cut(s) 1281
ApeKI GCWGC 2 cut(s) 498, 747
ApoI RAATTY 4 cut(s) 391, 668, 811, 842
ArsI GACNNNNNNTTYG 2 cut(s) 790, 822
AsiGI ACCGGT 1 cut(s) 1356
Asp700I GAANNNNTTC 1 cut(s) 560
AspLEI GCGC 2 cut(s) 607, 1073
AspS9I GGNCC 1 cut(s) 106
AsuC2I CCSGG 1 cut(s) 388
AsuHPI GGTGA 4 cut(s) 478, 632, 962, 1249
AsuII TTCGAA 1 cut(s) 809
AvaII GGWCC 1 cut(s) 106
BauI CACGAG 2 cut(s) 635, 1259
BbrPI CACGTG 1 cut(s) 399
BbsI GAAGAC 1 cut(s) 732
Bbv12I GWGCWC 1 cut(s) 1232
BbvI GCAGC 2 cut(s) 485, 759
BccI CCATC 1 cut(s) 1153
BceAI ACGGC 5 cut(s) 618, 863, 1084, 1233, 1268
BcgI CGANNNNNNTGC 4 cut(s) 736, 770, 1133, 1167
BciVI GTATCC 1 cut(s) 1182
BclI TGATCA 1 cut(s) 58
BcnI CCSGG 1 cut(s) 388
BcoDI GTCTC 5 cut(s) 61, 403, 767, 846, 964
BfaI CTAG 4 cut(s) 296, 486, 918, 960
BfuI GTATCC 1 cut(s) 1182
BisI GCNGC 5 cut(s) 325, 366, 499, 748, 966
BlsI GCNGC 5 cut(s) 326, 367, 500, 749, 967
BmcAI AGTACT 1 cut(s) 33
Bme1390I CCNGG 1 cut(s) 388
Bme18I GGWCC 1 cut(s) 106
BmgBI CACGTC 1 cut(s) 1051
BmgT120I GGNCC 1 cut(s) 106
BmrFI CCNGG 1 cut(s) 388
BmsI GCATC 2 cut(s) 183, 1044
BpiI GAAGAC 1 cut(s) 732
Bpu14I TTCGAA 1 cut(s) 809
BpuEI CTTGAG 1 cut(s) 1406
BpuMI CCSGG 1 cut(s) 388
BsaAI YACGTR 1 cut(s) 399
BsaBI GATNNNNATC 1 cut(s) 713
BsaI GGTCTC 2 cut(s) 403, 767
BsaJI CCNNGG 2 cut(s) 340, 899
BsaWI WCCGGW 2 cut(s) 837, 1356
BsaXI ACNNNNNCTCC 2 cut(s) 152, 182
Bsc4I CCNNNNNNNGG 3 cut(s) 837, 1136, 1181
Bse118I RCCGGY 1 cut(s) 1356
Bse1I ACTGG 2 cut(s) 187, 1239
Bse3DI GCAATG 1 cut(s) 87
Bse8I GATNNNNATC 1 cut(s) 713
BseAI TCCGGA 1 cut(s) 837
BseDI CCNNGG 2 cut(s) 340, 899
BseGI GGATG 2 cut(s) 198, 1083
BseJI GATNNNNATC 1 cut(s) 713
BseLI CCNNNNNNNGG 3 cut(s) 837, 1136, 1181
BseMI GCAATG 1 cut(s) 87
BseMII CTCAG 4 cut(s) 154, 188, 862, 1184
BseNI ACTGG 2 cut(s) 187, 1239
BseRI GAGGAG 1 cut(s) 1238
BseXI GCAGC 2 cut(s) 485, 759
Bsh1236I CGCG 9 cut(s) 450, 607, 931, 947, 1019, 1073, 1109, 1254, 1296
Bsh1285I CGRYCG 2 cut(s) 1113, 1134
BshFI GGCC 1 cut(s) 1283
BshTI ACCGGT 1 cut(s) 1356
BsiEI CGRYCG 2 cut(s) 1113, 1134
BsiHKAI GWGCWC 1 cut(s) 1232
BsiSI CCGG 4 cut(s) 387, 521, 838, 1357
BslI CCNNNNNNNGG 3 cut(s) 837, 1136, 1181
BsmAI GTCTC 5 cut(s) 61, 403, 767, 846, 964
BsnI GGCC 1 cut(s) 1283
Bso31I GGTCTC 2 cut(s) 403, 767
Bsp119I TTCGAA 1 cut(s) 809
Bsp1286I GDGCHC 1 cut(s) 1232
Bsp13I TCCGGA 1 cut(s) 837
Bsp1407I TGTACA 1 cut(s) 594
Bsp143I GATC 9 cut(s) 58, 660, 802, 926, 1110, 1131, 1212, 1255, 1273
Bsp19I CCATGG 1 cut(s) 340
Bsp68I TCGCGA 2 cut(s) 931, 1019
BspANI GGCC 1 cut(s) 1283
BspCNI CTCAG 4 cut(s) 153, 189, 861, 1185
BspEI TCCGGA 1 cut(s) 837
BspFNI CGCG 9 cut(s) 450, 607, 931, 947, 1019, 1073, 1109, 1254, 1296
BspPI GGATC 3 cut(s) 668, 797, 1268
BspT104I TTCGAA 1 cut(s) 809
BspTNI GGTCTC 2 cut(s) 403, 767
BsrBI CCGCTC 1 cut(s) 965
BsrDI GCAATG 1 cut(s) 87
BsrFI RCCGGY 1 cut(s) 1356
BsrGI TGTACA 1 cut(s) 594
BsrI ACTGG 2 cut(s) 187, 1239
BssAI RCCGGY 1 cut(s) 1356
BssECI CCNNGG 2 cut(s) 340, 899
BssMI GATC 9 cut(s) 58, 660, 802, 926, 1110, 1131, 1212, 1255, 1273
BssSI CACGAG 2 cut(s) 635, 1259
BssT1I CCWWGG 1 cut(s) 340
Bst2BI CACGAG 2 cut(s) 635, 1259
Bst4CI ACNGT 8 cut(s) 31, 124, 168, 287, 358, 466, 776, 1036
Bst6I CTCTTC 2 cut(s) 59, 102
BstAUI TGTACA 1 cut(s) 594
BstBAI YACGTR 1 cut(s) 399
BstBI TTCGAA 1 cut(s) 809
BstC8I GCNNGC 2 cut(s) 933, 1152
BstDEI CTNAG 5 cut(s) 140, 188, 197, 848, 1193
BstDSI CCRYGG 2 cut(s) 340, 899
BstF5I GGATG 2 cut(s) 198, 1083
BstFNI CGCG 9 cut(s) 450, 607, 931, 947, 1019, 1073, 1109, 1254, 1296
BstHHI GCGC 2 cut(s) 607, 1073
BstKTI GATC 9 cut(s) 61, 663, 805, 929, 1113, 1134, 1215, 1258, 1276
BstMAI GTCTC 5 cut(s) 61, 403, 767, 846, 964
BstMBI GATC 9 cut(s) 58, 660, 802, 926, 1110, 1131, 1212, 1255, 1273
BstMCI CGRYCG 2 cut(s) 1113, 1134
BstMWI GCNNNNNNNGC 5 cut(s) 89, 321, 965, 1025, 1068
BstSCI CCNGG 1 cut(s) 386
BstUI CGCG 9 cut(s) 450, 607, 931, 947, 1019, 1073, 1109, 1254, 1296
BstV1I GCAGC 2 cut(s) 485, 759
BstV2I GAAGAC 1 cut(s) 732
BstX2I RGATCY 1 cut(s) 1273
BstYI RGATCY 1 cut(s) 1273
BsuI GTATCC 1 cut(s) 1182
BsuRI GGCC 1 cut(s) 1283
BtgI CCRYGG 2 cut(s) 340, 899
BtgZI GCGATG 1 cut(s) 330
BtrI CACGTC 1 cut(s) 1051
BtsCI GGATG 2 cut(s) 198, 1083
BtsIMutI CAGTG 5 cut(s) 120, 180, 283, 1232, 1413
BtuMI TCGCGA 2 cut(s) 931, 1019
Cac8I GCNNGC 2 cut(s) 933, 1152
CfoI GCGC 2 cut(s) 607, 1073
Cfr10I RCCGGY 1 cut(s) 1356
Cfr13I GGNCC 1 cut(s) 106
CseI GACGC 2 cut(s) 739, 1260
Csp6I GTAC 6 cut(s) 32, 476, 595, 1207, 1246, 1328
CspAI ACCGGT 1 cut(s) 1356
CviAII CATG 5 cut(s) 341, 442, 566, 1087, 1186
CviQI GTAC 6 cut(s) 32, 476, 595, 1207, 1246, 1328
DdeI CTNAG 5 cut(s) 140, 188, 197, 848, 1193
DpnI GATC 9 cut(s) 60, 662, 804, 928, 1112, 1133, 1214, 1257, 1275
DpnII GATC 9 cut(s) 58, 660, 802, 926, 1110, 1131, 1212, 1255, 1273
DraI TTTAAA 1 cut(s) 985
EaeI YGGCCR 1 cut(s) 1281
Eam1104I CTCTTC 2 cut(s) 59, 102
EarI CTCTTC 2 cut(s) 59, 102
EciI GGCGGA 4 cut(s) 865, 907, 1013, 1235
Eco130I CCWWGG 1 cut(s) 340
Eco31I GGTCTC 2 cut(s) 403, 767
Eco47I GGWCC 1 cut(s) 106
Eco72I CACGTG 1 cut(s) 399
EcoRI GAATTC 2 cut(s) 391, 811
EcoT14I CCWWGG 1 cut(s) 340
ErhI CCWWGG 1 cut(s) 340
FaeI CATG 5 cut(s) 344, 445, 569, 1090, 1189
FatI CATG 5 cut(s) 340, 441, 565, 1086, 1185
FauI CCCGC 3 cut(s) 940, 1066, 1289
FbaI TGATCA 1 cut(s) 58
Fnu4HI GCNGC 5 cut(s) 325, 366, 499, 748, 966
FokI GGATG 2 cut(s) 205, 1090
Fsp4HI GCNGC 5 cut(s) 325, 366, 499, 748, 966
FspBI CTAG 4 cut(s) 296, 486, 918, 960
GlaI GCGC 2 cut(s) 606, 1072
GluI GCNGC 5 cut(s) 325, 366, 499, 748, 966
HaeIII GGCC 1 cut(s) 1283
HapII CCGG 4 cut(s) 387, 521, 838, 1357
HgaI GACGC 2 cut(s) 739, 1260
HhaI GCGC 2 cut(s) 607, 1073
Hin1II CATG 5 cut(s) 344, 445, 569, 1090, 1189
Hin6I GCGC 2 cut(s) 605, 1071
HinP1I GCGC 2 cut(s) 605, 1071
HpaII CCGG 4 cut(s) 387, 521, 838, 1357
HphI GGTGA 4 cut(s) 478, 632, 962, 1249
Hpy166II GTNNAC 4 cut(s) 597, 943, 1039, 1066
Hpy188III TCNNGA 8 cut(s) 583, 637, 838, 930, 1018, 1114, 1259, 1385
Hpy8I GTNNAC 4 cut(s) 597, 943, 1039, 1066
Hpy99I CGWCG 4 cut(s) 332, 604, 722, 1180
HpyAV CCTTC 3 cut(s) 4, 816, 1174
HpyCH4III ACNGT 8 cut(s) 31, 124, 168, 287, 358, 466, 776, 1036
HpyCH4IV ACGT 5 cut(s) 330, 374, 398, 1050, 1338
HpyCH4V TGCA 5 cut(s) 120, 258, 1154, 1289, 1396
HpyF10VI GCNNNNNNNGC 5 cut(s) 89, 321, 965, 1025, 1068
HpyF3I CTNAG 5 cut(s) 140, 188, 197, 848, 1193
HpySE526I ACGT 5 cut(s) 330, 374, 398, 1050, 1338
Hsp92II CATG 5 cut(s) 344, 445, 569, 1090, 1189
HspAI GCGC 2 cut(s) 605, 1071
Kpn2I TCCGGA 1 cut(s) 837
Ksp22I TGATCA 1 cut(s) 58
Kzo9I GATC 9 cut(s) 58, 660, 802, 926, 1110, 1131, 1212, 1255, 1273
LmnI GCTCC 2 cut(s) 80, 921
Lsp1109I GCAGC 2 cut(s) 485, 759
LweI GCATC 2 cut(s) 183, 1044
MaeI CTAG 4 cut(s) 296, 486, 918, 960
MaeII ACGT 5 cut(s) 330, 374, 398, 1050, 1338
MaeIII GTNAC 7 cut(s) 162, 281, 287, 370, 637, 880, 1046
MalI GATC 9 cut(s) 60, 662, 804, 928, 1112, 1133, 1214, 1257, 1275
MbiI CCGCTC 1 cut(s) 965
MboI GATC 9 cut(s) 58, 660, 802, 926, 1110, 1131, 1212, 1255, 1273
MboII GAAGA 6 cut(s) 76, 89, 251, 734, 737, 1118
MflI RGATCY 1 cut(s) 1273
MhlI GDGCHC 1 cut(s) 1232
MluCI AATT 9 cut(s) 209, 391, 470, 559, 668, 677, 697, 811, 842
MluI ACGCGT 1 cut(s) 448
MroI TCCGGA 1 cut(s) 837
MroXI GAANNNNTTC 1 cut(s) 560
MseI TTAA 4 cut(s) 129, 212, 672, 984
MslI CAYNNNNRTG 1 cut(s) 1235
MspA1I CMGCKG 1 cut(s) 618
MspI CCGG 4 cut(s) 387, 521, 838, 1357
MspR9I CCNGG 1 cut(s) 388
MvnI CGCG 9 cut(s) 450, 607, 931, 947, 1019, 1073, 1109, 1254, 1296
MwoI GCNNNNNNNGC 5 cut(s) 89, 321, 965, 1025, 1068
NciI CCSGG 1 cut(s) 388
NcoI CCATGG 1 cut(s) 340
NdeII GATC 9 cut(s) 58, 660, 802, 926, 1110, 1131, 1212, 1255, 1273
NlaIII CATG 5 cut(s) 344, 445, 569, 1090, 1189
NmeAIII GCCGAG 1 cut(s) 1038
NmuCI GTSAC 5 cut(s) 281, 370, 637, 880, 1046
NruI TCGCGA 2 cut(s) 931, 1019
NspV TTCGAA 1 cut(s) 809
OliI CACNNNNGTG 1 cut(s) 1235
PcsI WCGNNNNNNNCGW 3 cut(s) 726, 1016, 1140
PdmI GAANNNNTTC 1 cut(s) 560
PfoI TCCNGGA 1 cut(s) 386
PinAI ACCGGT 1 cut(s) 1356
PkrI GCNGC 5 cut(s) 326, 367, 500, 749, 967
Ple19I CGATCG 2 cut(s) 1113, 1134
PmaCI CACGTG 1 cut(s) 399
PmlI CACGTG 1 cut(s) 399
Ppu21I YACGTR 1 cut(s) 399
Psp1406I AACGTT 1 cut(s) 1338
PspCI CACGTG 1 cut(s) 399
PspPI GGNCC 1 cut(s) 106
PsuI RGATCY 1 cut(s) 1273
PvuI CGATCG 2 cut(s) 1113, 1134
RruI TCGCGA 2 cut(s) 931, 1019
RsaI GTAC 6 cut(s) 33, 477, 596, 1208, 1247, 1329
RsaNI GTAC 6 cut(s) 32, 476, 595, 1207, 1246, 1328
RseI CAYNNNNRTG 1 cut(s) 1235
SaqAI TTAA 4 cut(s) 129, 212, 672, 984
SatI GCNGC 5 cut(s) 325, 366, 499, 748, 966
Sau3AI GATC 9 cut(s) 58, 660, 802, 926, 1110, 1131, 1212, 1255, 1273
Sau96I GGNCC 1 cut(s) 106
ScaI AGTACT 1 cut(s) 33
ScrFI CCNGG 1 cut(s) 388
SduI GDGCHC 1 cut(s) 1232
SfaNI GCATC 2 cut(s) 183, 1044
SfuI TTCGAA 1 cut(s) 809
SinI GGWCC 1 cut(s) 106
SmiMI CAYNNNNRTG 1 cut(s) 1235
SmlI CTYRAG 1 cut(s) 1385
SmoI CTYRAG 1 cut(s) 1385
Sse9I AATT 9 cut(s) 209, 391, 470, 559, 668, 677, 697, 811, 842
SspMI CTAG 4 cut(s) 296, 486, 918, 960
StyD4I CCNGG 1 cut(s) 386
StyI CCWWGG 1 cut(s) 340
TaaI ACNGT 8 cut(s) 31, 124, 168, 287, 358, 466, 776, 1036
TaiI ACGT 5 cut(s) 333, 377, 401, 1053, 1341
TaqI TCGA 5 cut(s) 717, 809, 1143, 1167, 1178
TasI AATT 9 cut(s) 209, 391, 470, 559, 668, 677, 697, 811, 842
TatI WGTACW 4 cut(s) 31, 475, 594, 1206
TauI GCSGC 3 cut(s) 327, 368, 968
Tru1I TTAA 4 cut(s) 129, 212, 672, 984
Tru9I TTAA 4 cut(s) 129, 212, 672, 984
TscAI CASTG 5 cut(s) 127, 187, 290, 1239, 1413
TseFI GTSAC 5 cut(s) 281, 370, 637, 880, 1046
TseI GCWGC 2 cut(s) 498, 747
Tsp45I GTSAC 5 cut(s) 281, 370, 637, 880, 1046
TspDTI ATGAA 3 cut(s) 76, 458, 1202
TspGWI ACGGA 5 cut(s) 590, 916, 1025, 1164, 1263
TspRI CASTG 5 cut(s) 127, 187, 290, 1239, 1413
VpaK11BI GGWCC 1 cut(s) 106
XapI RAATTY 4 cut(s) 391, 668, 811, 842
XmnI GAANNNNTTC 1 cut(s) 560
XspI CTAG 4 cut(s) 296, 486, 918, 960
ZrmI AGTACT 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.