RLG00000005377

Glycosyltransferase-like domain-containing protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
67185743 .. 67186387
645 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005377

Sequence Viewer

Length: 342 bp
ATGAAGTACGATTCAGTGATTTCCAGAAGCATTCATCGGCTTGAGCAGAAGAGACTAGGATATGGAGCATTTCCTTGTTTCTTCCTGATAGCATTATGCTTTCGCACAGTGCTCGAGCTTGGTCTGATTCGACCAGCTTGTATGTCCATTGATTCTTCTTCTTTTGCTAATCTGTCAGTAATCAAAGGTAAACTTGACTGGGAGATGGGAATCGAAGAGGTTAAAGATGTCAGTTTTCAAGTAGGAGACTTTGGCCTACAGGAAAATGAGAGACATGAACCAGATGGAGGGAGAAATAAAGTTGTGACAAAGAATTTGGAGCCGATTTGCAATGTTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

114

Amino Acids

12.78

Weight (kDa)

6.72

Isoelectric Point (pI)

55.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 313
AfaI GTAC 1 cut(s) 8
AfiI CCNNNNNNNGG 1 cut(s) 287
AgsI TTSAA 1 cut(s) 239
AluBI AGCT 2 cut(s) 118, 137
AluI AGCT 2 cut(s) 118, 137
Alw21I GWGCWC 1 cut(s) 114
Alw26I GTCTC 3 cut(s) 46, 240, 265
Ama87I CYCGRG 1 cut(s) 113
AoxI GGCC 1 cut(s) 253
ApoI RAATTY 1 cut(s) 313
ArsI GACNNNNNNTTYG 2 cut(s) 298, 330
AvaI CYCGRG 1 cut(s) 113
Bbv12I GWGCWC 1 cut(s) 114
BccI CCATC 2 cut(s) 199, 278
BcgI CGANNNNNNTGC 2 cut(s) 94, 128
BcoDI GTCTC 3 cut(s) 46, 240, 265
BfaI CTAG 1 cut(s) 56
BfmI CTRYAG 1 cut(s) 257
BmeT110I CYCGRG 1 cut(s) 113
BmiI GGNNCC 1 cut(s) 321
BmrI ACTGGG 1 cut(s) 208
BmuI ACTGGG 1 cut(s) 208
BpuEI CTTGAG 1 cut(s) 62
BsaBI GATNNNNATC 1 cut(s) 209
Bsc4I CCNNNNNNNGG 1 cut(s) 287
Bse1I ACTGG 1 cut(s) 203
Bse3DI GCAATG 1 cut(s) 337
Bse8I GATNNNNATC 1 cut(s) 209
BseJI GATNNNNATC 1 cut(s) 209
BseLI CCNNNNNNNGG 1 cut(s) 287
BseMI GCAATG 1 cut(s) 337
BseNI ACTGG 1 cut(s) 203
BshFI GGCC 1 cut(s) 255
BsiHKAI GWGCWC 1 cut(s) 114
BsiHKCI CYCGRG 1 cut(s) 113
BslI CCNNNNNNNGG 1 cut(s) 287
BsmAI GTCTC 3 cut(s) 46, 240, 265
BsmI GAATGC 1 cut(s) 30
BsnI GGCC 1 cut(s) 255
BsoBI CYCGRG 1 cut(s) 113
Bsp1286I GDGCHC 1 cut(s) 114
BspANI GGCC 1 cut(s) 255
BspLI GGNNCC 1 cut(s) 321
BsrDI GCAATG 1 cut(s) 337
BsrI ACTGG 1 cut(s) 203
Bst4CI ACNGT 1 cut(s) 109
Bst6I CTCTTC 2 cut(s) 44, 210
BstMAI GTCTC 3 cut(s) 46, 240, 265
BstSFI CTRYAG 1 cut(s) 257
BsuRI GGCC 1 cut(s) 255
BtsIMutI CAGTG 2 cut(s) 21, 114
Csp6I GTAC 1 cut(s) 7
CviAII CATG 1 cut(s) 275
CviJI RGCY 5 cut(s) 40, 118, 137, 255, 322
CviKI_1 RGCY 5 cut(s) 40, 118, 137, 255, 322
CviQI GTAC 1 cut(s) 7
Eam1104I CTCTTC 2 cut(s) 44, 210
EarI CTCTTC 2 cut(s) 44, 210
Eco88I CYCGRG 1 cut(s) 113
FaeI CATG 1 cut(s) 278
FaiI YATR 4 cut(s) 63, 97, 143, 276
FalI AAGNNNNNCTT 2 cut(s) 177, 209
FatI CATG 1 cut(s) 274
FspBI CTAG 1 cut(s) 56
HaeIII GGCC 1 cut(s) 255
Hin1II CATG 1 cut(s) 278
HinfI GANTC 4 cut(s) 11, 127, 152, 210
Hpy166II GTNNAC 1 cut(s) 191
Hpy188I TCNGA 1 cut(s) 126
Hpy188III TCNNGA 2 cut(s) 24, 85
Hpy8I GTNNAC 1 cut(s) 191
HpyCH4III ACNGT 1 cut(s) 109
HpyCH4V TGCA 1 cut(s) 330
Hsp92II CATG 1 cut(s) 278
LmnI GCTCC 2 cut(s) 65, 319
LpnPI CCDG 6 cut(s) 37, 98, 147, 184, 245, 294
MaeI CTAG 1 cut(s) 56
MaeIII GTNAC 1 cut(s) 304
MboII GAAGA 5 cut(s) 61, 73, 147, 150, 227
MhlI GDGCHC 1 cut(s) 114
MluCI AATT 1 cut(s) 313
MnlI CCTC 2 cut(s) 211, 281
MseI TTAA 2 cut(s) 222, 336
Mva1269I GAATGC 1 cut(s) 30
NlaIII CATG 1 cut(s) 278
NlaIV GGNNCC 1 cut(s) 321
NmuCI GTSAC 1 cut(s) 304
PaeR7I CTCGAG 1 cut(s) 113
PctI GAATGC 1 cut(s) 30
PfeI GAWTC 4 cut(s) 11, 127, 152, 210
PspN4I GGNNCC 1 cut(s) 321
PspXI VCTCGAGB 1 cut(s) 113
RsaI GTAC 1 cut(s) 8
RsaNI GTAC 1 cut(s) 7
SaqAI TTAA 2 cut(s) 222, 336
SduI GDGCHC 1 cut(s) 114
SetI ASST 4 cut(s) 120, 139, 190, 222
SfcI CTRYAG 1 cut(s) 257
Sfr274I CTCGAG 1 cut(s) 113
SlaI CTCGAG 1 cut(s) 113
SmlI CTYRAG 2 cut(s) 41, 113
SmoI CTYRAG 2 cut(s) 41, 113
Sse9I AATT 1 cut(s) 313
SspMI CTAG 1 cut(s) 56
TaaI ACNGT 1 cut(s) 109
TaqI TCGA 3 cut(s) 114, 130, 213
TasI AATT 1 cut(s) 313
TfiI GAWTC 4 cut(s) 11, 127, 152, 210
Tru1I TTAA 2 cut(s) 222, 336
Tru9I TTAA 2 cut(s) 222, 336
TscAI CASTG 2 cut(s) 21, 114
TseFI GTSAC 1 cut(s) 304
Tsp45I GTSAC 1 cut(s) 304
TspDTI ATGAA 3 cut(s) 17, 23, 291
TspRI CASTG 2 cut(s) 21, 114
XapI RAATTY 1 cut(s) 313
XhoI CTCGAG 1 cut(s) 113
XspI CTAG 1 cut(s) 56
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.