RLG00000005376

Glycosyltransferase-like domain-containing protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
67185249 .. 67185735
487 bp
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UTR
Exon/CDS
Intron
RLM00000005376

Sequence Viewer

Length: 459 bp
ATGAGTTTTGCGAGATCAACAAGGATGTTCGGGTGGATGGGAAATCGGCTTCAGTGTTTATTGTTTCATCTGAAATGGATCTGGGAAATGGGAATAGCTCCTGGACAATTAGACCATATGCTCGAAAAGAAGACAAAGGGCAATGAGGGATACACGAAAATGGAAATGCCTCAATGTACACGAAATCACACTGTTCCAGCCATCTTGTTTTCAACTGGAGGATATACAGGAAACCATTTCCATGAATTTGCTGATGTGGTTATTCCGCTCTATATTAATTCTCAAAAATATGATGGAGAAGTTCAATTTCTTATCACTGACAAACGATCTTGGTGGATTACAAAGTACAAAACAGTATTACAAGGACTATCCAAGTATGAGGCTATCAACATTGAGGAAGATGTAGTCCACTGCTTCCCAAGCACAACAGTCGGCCTTAAACACATCCCAAGGATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

153

Amino Acids

17.67

Weight (kDa)

8.76

Isoelectric Point (pI)

47.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 268
AciI CCGC 1 cut(s) 266
AclWI GGATC 1 cut(s) 86
AcsI RAATTY 1 cut(s) 245
AcuI CTGAAG 1 cut(s) 35
AfaI GTAC 2 cut(s) 178, 347
AgsI TTSAA 2 cut(s) 213, 305
AjnI CCWGG 1 cut(s) 100
AluBI AGCT 1 cut(s) 98
AluI AGCT 1 cut(s) 98
AlwI GGATC 1 cut(s) 86
AoxI GGCC 1 cut(s) 433
ApoI RAATTY 1 cut(s) 245
AseI ATTAAT 1 cut(s) 276
BbsI GAAGAC 1 cut(s) 137
BccI CCATC 3 cut(s) 31, 209, 287
BcgI CGANNNNNNTGC 2 cut(s) 412, 446
BciT130I CCWGG 1 cut(s) 102
BciVI GTATCC 1 cut(s) 143
BfuI GTATCC 1 cut(s) 143
Bme1390I CCNGG 1 cut(s) 102
BmrFI CCNGG 1 cut(s) 102
BpiI GAAGAC 1 cut(s) 137
BpmI CTGGAG 1 cut(s) 237
BsaJI CCNNGG 1 cut(s) 449
Bse1I ACTGG 1 cut(s) 220
Bse3DI GCAATG 1 cut(s) 148
BseBI CCWGG 1 cut(s) 102
BseDI CCNNGG 1 cut(s) 449
BseGI GGATG 3 cut(s) 30, 42, 444
BseMI GCAATG 1 cut(s) 148
BseNI ACTGG 1 cut(s) 220
BshFI GGCC 1 cut(s) 435
BsnI GGCC 1 cut(s) 435
Bsp1407I TGTACA 1 cut(s) 176
Bsp143I GATC 4 cut(s) 14, 78, 326, 453
BspACI CCGC 1 cut(s) 266
BspANI GGCC 1 cut(s) 435
BspPI GGATC 1 cut(s) 86
BsrBI CCGCTC 1 cut(s) 268
BsrDI GCAATG 1 cut(s) 148
BsrGI TGTACA 1 cut(s) 176
BsrI ACTGG 1 cut(s) 220
BssECI CCNNGG 1 cut(s) 449
BssMI GATC 4 cut(s) 14, 78, 326, 453
BssT1I CCWWGG 1 cut(s) 449
Bst2UI CCWGG 1 cut(s) 102
Bst4CI ACNGT 3 cut(s) 193, 355, 430
BstAUI TGTACA 1 cut(s) 176
BstF5I GGATG 3 cut(s) 30, 42, 444
BstKTI GATC 4 cut(s) 17, 81, 329, 456
BstMBI GATC 4 cut(s) 14, 78, 326, 453
BstMWI GCNNNNNNNGC 1 cut(s) 420
BstNI CCWGG 1 cut(s) 102
BstSCI CCNGG 1 cut(s) 100
BstV2I GAAGAC 1 cut(s) 137
BstX2I RGATCY 2 cut(s) 78, 453
BstYI RGATCY 2 cut(s) 78, 453
BsuI GTATCC 1 cut(s) 143
BsuRI GGCC 1 cut(s) 435
BtsCI GGATG 3 cut(s) 30, 42, 444
BtsI GCAGTG 1 cut(s) 409
BtsIMutI CAGTG 4 cut(s) 59, 189, 315, 409
Csp6I GTAC 2 cut(s) 177, 346
CviAII CATG 1 cut(s) 242
CviJI RGCY 5 cut(s) 49, 98, 200, 383, 435
CviKI_1 RGCY 5 cut(s) 49, 98, 200, 383, 435
CviQI GTAC 2 cut(s) 177, 346
DpnI GATC 4 cut(s) 16, 80, 328, 455
DpnII GATC 4 cut(s) 14, 78, 326, 453
Eco130I CCWWGG 1 cut(s) 449
Eco57I CTGAAG 1 cut(s) 35
EcoRII CCWGG 1 cut(s) 100
EcoT14I CCWWGG 1 cut(s) 449
ErhI CCWWGG 1 cut(s) 449
FaeI CATG 1 cut(s) 245
FaiI YATR 7 cut(s) 117, 119, 225, 243, 273, 291, 378
FatI CATG 1 cut(s) 241
FauNDI CATATG 1 cut(s) 117
FokI GGATG 3 cut(s) 37, 49, 431
GsuI CTGGAG 1 cut(s) 237
HaeIII GGCC 1 cut(s) 435
Hin1II CATG 1 cut(s) 245
Hpy166II GTNNAC 2 cut(s) 179, 409
Hpy188I TCNGA 2 cut(s) 72, 458
Hpy8I GTNNAC 2 cut(s) 179, 409
HpyCH4III ACNGT 3 cut(s) 193, 355, 430
HpyF10VI GCNNNNNNNGC 1 cut(s) 420
Hsp92II CATG 1 cut(s) 245
Kzo9I GATC 4 cut(s) 14, 78, 326, 453
LmnI GCTCC 1 cut(s) 103
LpnPI CCDG 6 cut(s) 67, 87, 114, 201, 210, 213
MalI GATC 4 cut(s) 16, 80, 328, 455
MbiI CCGCTC 1 cut(s) 268
MboI GATC 4 cut(s) 14, 78, 326, 453
MboII GAAGA 2 cut(s) 142, 410
MflI RGATCY 2 cut(s) 78, 453
MluCI AATT 4 cut(s) 107, 245, 277, 305
MnlI CCTC 5 cut(s) 139, 180, 212, 373, 388
MseI TTAA 2 cut(s) 276, 438
MslI CAYNNNNRTG 2 cut(s) 158, 240
MspR9I CCNGG 1 cut(s) 102
MvaI CCWGG 1 cut(s) 102
MwoI GCNNNNNNNGC 1 cut(s) 420
NdeI CATATG 1 cut(s) 117
NdeII GATC 4 cut(s) 14, 78, 326, 453
NlaIII CATG 1 cut(s) 245
PfoI TCCNGGA 1 cut(s) 100
PshBI ATTAAT 1 cut(s) 276
Psp6I CCWGG 1 cut(s) 100
PspGI CCWGG 1 cut(s) 100
PsuI RGATCY 2 cut(s) 78, 453
RsaI GTAC 2 cut(s) 178, 347
RsaNI GTAC 2 cut(s) 177, 346
RseI CAYNNNNRTG 2 cut(s) 158, 240
SaqAI TTAA 2 cut(s) 276, 438
Sau3AI GATC 4 cut(s) 14, 78, 326, 453
ScrFI CCNGG 1 cut(s) 102
SetI ASST 1 cut(s) 100
SmiMI CAYNNNNRTG 2 cut(s) 158, 240
Sse9I AATT 4 cut(s) 107, 245, 277, 305
SsiI CCGC 1 cut(s) 266
StyD4I CCNGG 1 cut(s) 100
StyI CCWWGG 1 cut(s) 449
TaaI ACNGT 3 cut(s) 193, 355, 430
TaqI TCGA 1 cut(s) 123
TasI AATT 4 cut(s) 107, 245, 277, 305
TatI WGTACW 2 cut(s) 176, 345
Tru1I TTAA 2 cut(s) 276, 438
Tru9I TTAA 2 cut(s) 276, 438
TscAI CASTG 4 cut(s) 59, 196, 322, 416
TspDTI ATGAA 2 cut(s) 56, 258
TspRI CASTG 4 cut(s) 59, 196, 322, 416
VspI ATTAAT 1 cut(s) 276
XapI RAATTY 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.