RLG00000005375

Glycosyltransferase-like domain-containing protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
67184641 .. 67185060
420 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005375

Sequence Viewer

Length: 309 bp
ATGGCTAGAAACTTGGGATATGGGGTAACTGTTGCAGAGGCTGACAAGAACATGTCAAAAATTGCAGAAGTTGTGAATTCTTGTGATGTGCTAATGGGAGTCCATGTAGCTGGCCTAACAAACATTCTTTTCCTTCCTGAAAATGCAATTTTCATTCAAATACTTCCCGTAGGGGGATTCGAATGGATTGCAGCAAACTACTTCCGGGAGATGAATCTGAAGTATTTGGAATACAAGATAATCAAGGAGGTCGACTTTGTTAAAAGCCCTGGAGCTTCCTGCATCAGTAATCAGTTGCTTATTTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

103

Amino Acids

11.33

Weight (kDa)

5.24

Isoelectric Point (pI)

30.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 252
AcsI RAATTY 1 cut(s) 76
AcuI CTGAAG 1 cut(s) 239
AfiI CCNNNNNNNGG 1 cut(s) 173
AflIII ACRYGT 1 cut(s) 51
AgsI TTSAA 1 cut(s) 158
AjnI CCWGG 1 cut(s) 268
AluBI AGCT 2 cut(s) 110, 275
AluI AGCT 2 cut(s) 110, 275
AlwNI CAGNNNCTG 1 cut(s) 41
AoxI GGCC 1 cut(s) 112
ApeKI GCWGC 1 cut(s) 191
ApoI RAATTY 1 cut(s) 76
AsuC2I CCSGG 1 cut(s) 206
AsuII TTCGAA 1 cut(s) 180
BbvI GCAGC 1 cut(s) 203
BcgI CGANNNNNNTGC 2 cut(s) 170, 204
BciT130I CCWGG 1 cut(s) 270
BcnI CCSGG 1 cut(s) 206
BfaI CTAG 2 cut(s) 6, 307
BisI GCNGC 1 cut(s) 192
BlsI GCNGC 1 cut(s) 193
Bme1390I CCNGG 2 cut(s) 206, 270
BmrFI CCNGG 2 cut(s) 206, 270
BmsI GCATC 1 cut(s) 291
BpmI CTGGAG 1 cut(s) 291
Bpu14I TTCGAA 1 cut(s) 180
BpuMI CCSGG 1 cut(s) 206
BsaJI CCNNGG 1 cut(s) 268
BsaXI ACNNNNNCTCC 2 cut(s) 90, 120
Bsc4I CCNNNNNNNGG 1 cut(s) 173
BseBI CCWGG 1 cut(s) 270
BseDI CCNNGG 1 cut(s) 268
BseLI CCNNNNNNNGG 1 cut(s) 173
BseXI GCAGC 1 cut(s) 203
BshFI GGCC 1 cut(s) 114
BsiSI CCGG 1 cut(s) 205
BslI CCNNNNNNNGG 1 cut(s) 173
BsnI GGCC 1 cut(s) 114
Bsp119I TTCGAA 1 cut(s) 180
BspANI GGCC 1 cut(s) 114
BspT104I TTCGAA 1 cut(s) 180
BssECI CCNNGG 1 cut(s) 268
Bst2UI CCWGG 1 cut(s) 270
Bst4CI ACNGT 1 cut(s) 31
BstBI TTCGAA 1 cut(s) 180
BstC8I GCNNGC 1 cut(s) 112
BstNI CCWGG 1 cut(s) 270
BstNSI RCATGY 1 cut(s) 55
BstSCI CCNGG 2 cut(s) 204, 268
BstV1I GCAGC 1 cut(s) 203
BstXI CCANNNNNNTGG 1 cut(s) 110
BsuRI GGCC 1 cut(s) 114
Cac8I GCNNGC 1 cut(s) 112
CaiI CAGNNNCTG 1 cut(s) 41
CviAII CATG 2 cut(s) 52, 104
CviJI RGCY 6 cut(s) 5, 41, 110, 114, 267, 275
CviKI_1 RGCY 6 cut(s) 5, 41, 110, 114, 267, 275
Eco57I CTGAAG 1 cut(s) 239
EcoRI GAATTC 1 cut(s) 76
EcoRII CCWGG 1 cut(s) 268
FaeI CATG 2 cut(s) 55, 107
FaiI YATR 3 cut(s) 21, 53, 105
FatI CATG 2 cut(s) 51, 103
FblI GTMKAC 1 cut(s) 252
Fnu4HI GCNGC 1 cut(s) 192
Fsp4HI GCNGC 1 cut(s) 192
FspBI CTAG 2 cut(s) 6, 307
GluI GCNGC 1 cut(s) 192
GsuI CTGGAG 1 cut(s) 291
HaeIII GGCC 1 cut(s) 114
HapII CCGG 1 cut(s) 205
Hin1II CATG 2 cut(s) 55, 107
HincII GTYRAC 1 cut(s) 253
HindII GTYRAC 1 cut(s) 253
HinfI GANTC 3 cut(s) 99, 177, 214
HpaII CCGG 1 cut(s) 205
Hpy166II GTNNAC 1 cut(s) 253
Hpy188I TCNGA 1 cut(s) 219
Hpy188III TCNNGA 1 cut(s) 137
Hpy8I GTNNAC 1 cut(s) 253
HpyAV CCTTC 1 cut(s) 143
HpyCH4III ACNGT 1 cut(s) 31
HpyCH4V TGCA 5 cut(s) 35, 65, 146, 191, 282
Hsp92II CATG 2 cut(s) 55, 107
LmnI GCTCC 1 cut(s) 272
LpnPI CCDG 6 cut(s) 96, 150, 218, 255, 282, 292
Lsp1109I GCAGC 1 cut(s) 203
LweI GCATC 1 cut(s) 291
MaeI CTAG 2 cut(s) 6, 307
MaeIII GTNAC 1 cut(s) 25
MluCI AATT 3 cut(s) 60, 76, 147
MlyI GAGTC 1 cut(s) 108
MnlI CCTC 2 cut(s) 31, 241
MseI TTAA 1 cut(s) 261
MspI CCGG 1 cut(s) 205
MspR9I CCNGG 2 cut(s) 206, 270
MvaI CCWGG 1 cut(s) 270
NciI CCSGG 1 cut(s) 206
NlaIII CATG 2 cut(s) 55, 107
NspI RCATGY 1 cut(s) 55
NspV TTCGAA 1 cut(s) 180
PciI ACATGT 1 cut(s) 51
PfeI GAWTC 2 cut(s) 177, 214
PfoI TCCNGGA 1 cut(s) 204
PkrI GCNGC 1 cut(s) 193
PleI GAGTC 1 cut(s) 107
PpsI GAGTC 1 cut(s) 107
PscI ACATGT 1 cut(s) 51
Psp6I CCWGG 1 cut(s) 268
PspGI CCWGG 1 cut(s) 268
PstNI CAGNNNCTG 1 cut(s) 41
SalI GTCGAC 1 cut(s) 251
SaqAI TTAA 1 cut(s) 261
SatI GCNGC 1 cut(s) 192
SchI GAGTC 1 cut(s) 108
ScrFI CCNGG 2 cut(s) 206, 270
SetI ASST 3 cut(s) 112, 252, 277
SfaNI GCATC 1 cut(s) 291
SfuI TTCGAA 1 cut(s) 180
Sse9I AATT 3 cut(s) 60, 76, 147
SspMI CTAG 2 cut(s) 6, 307
StyD4I CCNGG 2 cut(s) 204, 268
TaaI ACNGT 1 cut(s) 31
TaqI TCGA 2 cut(s) 180, 252
TasI AATT 3 cut(s) 60, 76, 147
TfiI GAWTC 2 cut(s) 177, 214
Tru1I TTAA 1 cut(s) 261
Tru9I TTAA 1 cut(s) 261
TseI GCWGC 1 cut(s) 191
TspDTI ATGAA 2 cut(s) 142, 227
XapI RAATTY 1 cut(s) 76
XceI RCATGY 1 cut(s) 55
XmiI GTMKAC 1 cut(s) 252
XspI CTAG 2 cut(s) 6, 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.