Rh7DG021700

Glycosyltransferase-like domain-containing protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
1738676 .. 1738966
291 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG021700.1

Sequence Viewer

Length: 291 bp
ATGAGTCACGCTCGGAAGTGGTTAGTGAAACCACTGAGTACTGATCACCAGGAAATCCCTCAATGTACTCAGAATCGTAGTGTTCCTGCCCTTTTGTTTTCGACTGGAGGATTCACTGGAAACCATTTCCATGACTTCACTGATGTGGTGATTCCACTCTTTATTACCTCTGGACTATATAAGGGTGAAGTTCAATTTCTAATCACGGATACAAGACTATGGTGGATTAAAAAGTTCCAAGAAGTACTAAAAAGATTGTCCAACTATCAGTTCATTGACATTGACAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

96

Amino Acids

11.24

Weight (kDa)

8.85

Isoelectric Point (pI)

27.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 3 cut(s) 40, 67, 246
AgsI TTSAA 1 cut(s) 194
AjnI CCWGG 1 cut(s) 48
AjuI GAANNNNNNNTTGG 2 cut(s) 254, 286
AleI CACNNNNGTG 1 cut(s) 143
AsuHPI GGTGA 3 cut(s) 38, 160, 197
BciT130I CCWGG 1 cut(s) 50
BciVI GTATCC 1 cut(s) 202
BclI TGATCA 1 cut(s) 43
BfuI GTATCC 1 cut(s) 202
BmcAI AGTACT 2 cut(s) 40, 246
Bme1390I CCNGG 1 cut(s) 50
BmrFI CCNGG 1 cut(s) 50
BplI GAGNNNNNCTC 1 cut(s) 27
BpmI CTGGAG 1 cut(s) 126
Bse1I ACTGG 2 cut(s) 109, 121
BseBI CCWGG 1 cut(s) 50
BseMII CTCAG 2 cut(s) 26, 83
BseNI ACTGG 2 cut(s) 109, 121
Bsp143I GATC 1 cut(s) 43
BspCNI CTCAG 2 cut(s) 27, 82
BsrI ACTGG 2 cut(s) 109, 121
BssMI GATC 1 cut(s) 43
Bst2UI CCWGG 1 cut(s) 50
BstDEI CTNAG 2 cut(s) 35, 69
BstKTI GATC 1 cut(s) 46
BstMBI GATC 1 cut(s) 43
BstNI CCWGG 1 cut(s) 50
BstSCI CCNGG 1 cut(s) 48
BsuI GTATCC 1 cut(s) 202
BtsIMutI CAGTG 3 cut(s) 32, 114, 138
Csp6I GTAC 3 cut(s) 39, 66, 245
CviAII CATG 1 cut(s) 131
CviQI GTAC 3 cut(s) 39, 66, 245
DdeI CTNAG 2 cut(s) 35, 69
DpnI GATC 1 cut(s) 45
DpnII GATC 1 cut(s) 43
EcoRII CCWGG 1 cut(s) 48
FaeI CATG 1 cut(s) 134
FaiI YATR 4 cut(s) 132, 178, 180, 220
FatI CATG 1 cut(s) 130
FbaI TGATCA 1 cut(s) 43
GsuI CTGGAG 1 cut(s) 126
Hin1II CATG 1 cut(s) 134
HinfI GANTC 4 cut(s) 4, 73, 111, 151
HphI GGTGA 3 cut(s) 38, 160, 197
Hpy188I TCNGA 2 cut(s) 15, 72
Hpy188III TCNNGA 1 cut(s) 171
HpyF3I CTNAG 2 cut(s) 35, 69
Hsp92II CATG 1 cut(s) 134
Ksp22I TGATCA 1 cut(s) 43
Kzo9I GATC 1 cut(s) 43
LpnPI CCDG 6 cut(s) 35, 62, 90, 99, 102, 156
MaeIII GTNAC 1 cut(s) 5
MalI GATC 1 cut(s) 45
MboI GATC 1 cut(s) 43
MluCI AATT 1 cut(s) 194
MlyI GAGTC 1 cut(s) 13
MmeI TCCRAC 1 cut(s) 285
MnlI CCTC 3 cut(s) 69, 101, 178
MseI TTAA 1 cut(s) 228
MslI CAYNNNNRTG 2 cut(s) 129, 143
MspR9I CCNGG 1 cut(s) 50
MvaI CCWGG 1 cut(s) 50
NdeII GATC 1 cut(s) 43
NlaIII CATG 1 cut(s) 134
NmuCI GTSAC 1 cut(s) 5
OliI CACNNNNGTG 1 cut(s) 143
PfeI GAWTC 3 cut(s) 73, 111, 151
PleI GAGTC 1 cut(s) 12
PpsI GAGTC 1 cut(s) 12
Psp6I CCWGG 1 cut(s) 48
PspGI CCWGG 1 cut(s) 48
RsaI GTAC 3 cut(s) 40, 67, 246
RsaNI GTAC 3 cut(s) 39, 66, 245
RseI CAYNNNNRTG 2 cut(s) 129, 143
SaqAI TTAA 1 cut(s) 228
Sau3AI GATC 1 cut(s) 43
ScaI AGTACT 2 cut(s) 40, 246
SchI GAGTC 1 cut(s) 13
ScrFI CCNGG 1 cut(s) 50
SetI ASST 1 cut(s) 170
SmiMI CAYNNNNRTG 2 cut(s) 129, 143
Sse9I AATT 1 cut(s) 194
StyD4I CCNGG 1 cut(s) 48
TaqI TCGA 1 cut(s) 101
TasI AATT 1 cut(s) 194
TatI WGTACW 3 cut(s) 38, 65, 244
TfiI GAWTC 3 cut(s) 73, 111, 151
Tru1I TTAA 1 cut(s) 228
Tru9I TTAA 1 cut(s) 228
TscAI CASTG 3 cut(s) 39, 121, 145
TseFI GTSAC 1 cut(s) 5
Tsp45I GTSAC 1 cut(s) 5
TspDTI ATGAA 1 cut(s) 262
TspGWI ACGGA 1 cut(s) 221
TspRI CASTG 3 cut(s) 39, 121, 145
ZrmI AGTACT 2 cut(s) 40, 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.