Rh7CG022300

Glycosyltransferase-like domain-containing protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
1610899 .. 1611306
408 bp
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UTR
Exon/CDS
Intron
Rh7CG022300.1

Sequence Viewer

Length: 408 bp
ATGAAAGACTTCAGAAAGTTTCTGAGGACAACTTATTCTTTGAAGAAAGCTAATGCAATTAGAGTCAGGGATGGTCAGCACCAAAAGCCGTGGCTTCTCATCATACCAAGGAAGAGAACAAGGTCTTTCACAAATACAGGAGAGATTGGGAGAATGGCAAGAAGCTTGGGGTACAAGGTAAGTGTGGCAGAGGCTGCAGACATGAACGTCACGAAATTTGCACAGCTTGTGAATTCTTGTGATGTGTTGATGGGAGTTCATGGAGCTGGCCTCACCAACATTCTGTTCCTTCCTGATAATGCAATCTTGATCCAAATACTTCCAATTGGAGGGTATGAATGGACTGCAAAGACAGCTTTTGGAAACCCTTCACAGGATATATATGAATCTCAGGTACATGGAGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

135

Amino Acids

15.1

Weight (kDa)

9.94

Isoelectric Point (pI)

28.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_61 PF04577 4 - 103 9.6e-12 Glycosyltransferase 61
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 206
AclWI GGATC 1 cut(s) 304
AcsI RAATTY 2 cut(s) 215, 232
AfaI GTAC 2 cut(s) 173, 396
AfiI CCNNNNNNNGG 2 cut(s) 329, 373
AgsI TTSAA 1 cut(s) 43
AjuI GAANNNNNNNTTGG 2 cut(s) 269, 301
AluBI AGCT 5 cut(s) 50, 165, 226, 266, 356
AluI AGCT 5 cut(s) 50, 165, 226, 266, 356
AlwI GGATC 1 cut(s) 304
AlwNI CAGNNNCTG 1 cut(s) 194
AoxI GGCC 1 cut(s) 268
ApeKI GCWGC 1 cut(s) 194
ApoI RAATTY 2 cut(s) 215, 232
Asp700I GAANNNNTTC 2 cut(s) 8, 367
AsuHPI GGTGA 1 cut(s) 265
BbvI GCAGC 1 cut(s) 181
BccI CCATC 2 cut(s) 65, 244
BceAI ACGGC 1 cut(s) 73
BfmI CTRYAG 1 cut(s) 195
BisI GCNGC 1 cut(s) 195
BlsI GCNGC 1 cut(s) 196
BplI GAGNNNNNCTC 2 cut(s) 255, 287
BsaJI CCNNGG 2 cut(s) 89, 107
Bsc4I CCNNNNNNNGG 2 cut(s) 329, 373
BseDI CCNNGG 2 cut(s) 89, 107
BseGI GGATG 1 cut(s) 76
BseLI CCNNNNNNNGG 2 cut(s) 329, 373
BseMII CTCAG 2 cut(s) 14, 404
BseXI GCAGC 1 cut(s) 181
BshFI GGCC 1 cut(s) 270
BslI CCNNNNNNNGG 2 cut(s) 329, 373
BsnI GGCC 1 cut(s) 270
Bsp143I GATC 1 cut(s) 309
BspANI GGCC 1 cut(s) 270
BspCNI CTCAG 2 cut(s) 15, 403
BspMAI CTGCAG 1 cut(s) 199
BspPI GGATC 1 cut(s) 304
BssECI CCNNGG 2 cut(s) 89, 107
BssMI GATC 1 cut(s) 309
BssT1I CCWWGG 1 cut(s) 107
Bst6I CTCTTC 1 cut(s) 107
BstAPI GCANNNNNTGC 1 cut(s) 194
BstC8I GCNNGC 1 cut(s) 268
BstDEI CTNAG 2 cut(s) 23, 390
BstDSI CCRYGG 1 cut(s) 89
BstF5I GGATG 1 cut(s) 76
BstKTI GATC 1 cut(s) 312
BstMBI GATC 1 cut(s) 309
BstMWI GCNNNNNNNGC 3 cut(s) 85, 194, 353
BstSFI CTRYAG 1 cut(s) 195
BstV1I GCAGC 1 cut(s) 181
BsuRI GGCC 1 cut(s) 270
BtgI CCRYGG 1 cut(s) 89
BtsCI GGATG 1 cut(s) 76
Cac8I GCNNGC 1 cut(s) 268
CaiI CAGNNNCTG 1 cut(s) 194
Csp6I GTAC 2 cut(s) 172, 395
CspCI CAANNNNNGTGG 2 cut(s) 71, 106
CviAII CATG 3 cut(s) 202, 260, 398
CviJI RGCY 9 cut(s) 50, 88, 94, 165, 194, 226, 266, 270, 356
CviKI_1 RGCY 9 cut(s) 50, 88, 94, 165, 194, 226, 266, 270, 356
CviQI GTAC 2 cut(s) 172, 395
DdeI CTNAG 2 cut(s) 23, 390
DpnI GATC 1 cut(s) 311
DpnII GATC 1 cut(s) 309
DrdI GACNNNNNNGTC 1 cut(s) 206
DseDI GACNNNNNNGTC 1 cut(s) 206
Eam1104I CTCTTC 1 cut(s) 107
EarI CTCTTC 1 cut(s) 107
Eco130I CCWWGG 1 cut(s) 107
EcoRI GAATTC 1 cut(s) 232
EcoT14I CCWWGG 1 cut(s) 107
ErhI CCWWGG 1 cut(s) 107
FaeI CATG 3 cut(s) 205, 263, 401
FaiI YATR 9 cut(s) 104, 203, 261, 336, 380, 382, 384, 399, 406
FatI CATG 3 cut(s) 201, 259, 397
Fnu4HI GCNGC 1 cut(s) 195
FokI GGATG 1 cut(s) 83
Fsp4HI GCNGC 1 cut(s) 195
GluI GCNGC 1 cut(s) 195
HaeIII GGCC 1 cut(s) 270
Hin1II CATG 3 cut(s) 205, 263, 401
HindIII AAGCTT 1 cut(s) 163
HinfI GANTC 2 cut(s) 63, 386
HphI GGTGA 1 cut(s) 265
Hpy188I TCNGA 2 cut(s) 14, 24
Hpy188III TCNNGA 3 cut(s) 211, 293, 307
HpyAV CCTTC 2 cut(s) 299, 378
HpyCH4IV ACGT 1 cut(s) 207
HpyCH4V TGCA 5 cut(s) 56, 197, 221, 302, 347
HpyF10VI GCNNNNNNNGC 3 cut(s) 85, 194, 353
HpyF3I CTNAG 2 cut(s) 23, 390
HpySE526I ACGT 1 cut(s) 207
Hsp92II CATG 3 cut(s) 205, 263, 401
Kzo9I GATC 1 cut(s) 309
LmnI GCTCC 1 cut(s) 263
LpnPI CCDG 6 cut(s) 52, 123, 252, 306, 359, 377
Lsp1109I GCAGC 1 cut(s) 181
MaeII ACGT 1 cut(s) 207
MaeIII GTNAC 1 cut(s) 208
MalI GATC 1 cut(s) 311
MboI GATC 1 cut(s) 309
MboII GAAGA 2 cut(s) 55, 124
MfeI CAATTG 1 cut(s) 324
MluCI AATT 4 cut(s) 57, 215, 232, 324
MlyI GAGTC 1 cut(s) 72
MnlI CCTC 4 cut(s) 18, 184, 281, 323
MroXI GAANNNNTTC 2 cut(s) 8, 367
MunI CAATTG 1 cut(s) 324
MwoI GCNNNNNNNGC 3 cut(s) 85, 194, 353
NdeII GATC 1 cut(s) 309
NlaIII CATG 3 cut(s) 205, 263, 401
NmuCI GTSAC 1 cut(s) 208
PdmI GAANNNNTTC 2 cut(s) 8, 367
PfeI GAWTC 1 cut(s) 386
PkrI GCNGC 1 cut(s) 196
PleI GAGTC 1 cut(s) 71
PpsI GAGTC 1 cut(s) 71
PstI CTGCAG 1 cut(s) 199
PstNI CAGNNNCTG 1 cut(s) 194
RsaI GTAC 2 cut(s) 173, 396
RsaNI GTAC 2 cut(s) 172, 395
SatI GCNGC 1 cut(s) 195
Sau3AI GATC 1 cut(s) 309
SchI GAGTC 1 cut(s) 72
SetI ASST 9 cut(s) 52, 125, 167, 180, 210, 228, 268, 358, 396
SfcI CTRYAG 1 cut(s) 195
Sse9I AATT 4 cut(s) 57, 215, 232, 324
StyI CCWWGG 1 cut(s) 107
TaiI ACGT 1 cut(s) 210
TasI AATT 4 cut(s) 57, 215, 232, 324
TfiI GAWTC 1 cut(s) 386
TseFI GTSAC 1 cut(s) 208
TseI GCWGC 1 cut(s) 194
Tsp45I GTSAC 1 cut(s) 208
TspDTI ATGAA 5 cut(s) 17, 218, 248, 351, 399
XapI RAATTY 2 cut(s) 215, 232
XmnI GAANNNNTTC 2 cut(s) 8, 367
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.