Rh7DG021800

Glycosyltransferase-like domain-containing protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
1739060 .. 1739654
595 bp
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UTR
Exon/CDS
Intron
Rh7DG021800.1

Sequence Viewer

Length: 513 bp
ATGAAAGACTTCAGAAAGTTTCTGAGGACAACTTATTCTTTGAAGAAAGCTAATGCAATTAGAGTCAGGGATGGTCAGCACCAAAAGCCGTGGCTTCTCATCATACCAAGGAAGAGAACAAGGTCTTTCACAAATACAGGAGAGATTGGGAGAATGGCAAGAAGCTTGGGGTGCAAGGGAGCTGGCCTCACCAACATTCTGTTCCTTCCTGATAATGCAATCTTGATCCAAATACTTCCAATTGGAGGGTATGAATGGACTGCAAAGACAGCTTTTGGAAACCCTTCACAGGATATGAATCTCAGGTACATGGAGTATAAGATAAGCAATGAGGAGAGCACACTCATACAACAATACCCACTTAACCATGCAGTTTTTACTGACCCTCACTCTATTGCGAAACAGGGGTGGAAAGCAATCAAGTCAATCCTTATGGATAAGCAAAATGTAAAGCTTAATGTCAATAGGTTTAAACCCGCTTTGTTGAAAGCCCTTGAGCTTCTGCATCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

170

Amino Acids

19.52

Weight (kDa)

10.2

Isoelectric Point (pI)

32.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 477
AclWI GGATC 1 cut(s) 220
AfaI GTAC 1 cut(s) 308
AfiI CCNNNNNNNGG 2 cut(s) 245, 289
AgsI TTSAA 2 cut(s) 43, 487
AjuI GAANNNNNNNTTGG 2 cut(s) 185, 217
AluBI AGCT 6 cut(s) 50, 165, 182, 272, 454, 499
AluI AGCT 6 cut(s) 50, 165, 182, 272, 454, 499
Alw21I GWGCWC 1 cut(s) 341
AlwI GGATC 1 cut(s) 220
AoxI GGCC 1 cut(s) 184
Asp700I GAANNNNTTC 2 cut(s) 8, 283
AsuHPI GGTGA 1 cut(s) 181
Bbv12I GWGCWC 1 cut(s) 341
BccI CCATC 1 cut(s) 65
BceAI ACGGC 1 cut(s) 73
BplI GAGNNNNNCTC 2 cut(s) 171, 203
BsaBI GATNNNNATC 1 cut(s) 297
BsaJI CCNNGG 2 cut(s) 89, 107
Bsc4I CCNNNNNNNGG 2 cut(s) 245, 289
Bse3DI GCAATG 1 cut(s) 334
Bse8I GATNNNNATC 1 cut(s) 297
BseDI CCNNGG 2 cut(s) 89, 107
BseGI GGATG 1 cut(s) 76
BseJI GATNNNNATC 1 cut(s) 297
BseLI CCNNNNNNNGG 2 cut(s) 245, 289
BseMI GCAATG 1 cut(s) 334
BseMII CTCAG 2 cut(s) 14, 316
BseRI GAGGAG 1 cut(s) 347
BshFI GGCC 1 cut(s) 186
BsiHKAI GWGCWC 1 cut(s) 341
BslI CCNNNNNNNGG 2 cut(s) 245, 289
BsnI GGCC 1 cut(s) 186
Bsp1286I GDGCHC 1 cut(s) 341
Bsp143I GATC 1 cut(s) 225
BspACI CCGC 1 cut(s) 477
BspANI GGCC 1 cut(s) 186
BspCNI CTCAG 2 cut(s) 15, 315
BspPI GGATC 1 cut(s) 220
BsrDI GCAATG 1 cut(s) 334
BssECI CCNNGG 2 cut(s) 89, 107
BssMI GATC 1 cut(s) 225
BssT1I CCWWGG 1 cut(s) 107
Bst6I CTCTTC 1 cut(s) 107
BstC8I GCNNGC 1 cut(s) 184
BstDEI CTNAG 2 cut(s) 23, 302
BstDSI CCRYGG 1 cut(s) 89
BstF5I GGATG 1 cut(s) 76
BstKTI GATC 1 cut(s) 228
BstMBI GATC 1 cut(s) 225
BstMWI GCNNNNNNNGC 3 cut(s) 85, 171, 269
BsuRI GGCC 1 cut(s) 186
BtgI CCRYGG 1 cut(s) 89
BtsCI GGATG 1 cut(s) 76
Cac8I GCNNGC 1 cut(s) 184
Csp6I GTAC 1 cut(s) 307
CspCI CAANNNNNGTGG 2 cut(s) 71, 106
CviAII CATG 2 cut(s) 310, 368
CviQI GTAC 1 cut(s) 307
DdeI CTNAG 2 cut(s) 23, 302
DpnI GATC 1 cut(s) 227
DpnII GATC 1 cut(s) 225
DraI TTTAAA 1 cut(s) 472
Eam1104I CTCTTC 1 cut(s) 107
EarI CTCTTC 1 cut(s) 107
Eco130I CCWWGG 1 cut(s) 107
EcoT14I CCWWGG 1 cut(s) 107
ErhI CCWWGG 1 cut(s) 107
FaeI CATG 2 cut(s) 313, 371
FaiI YATR 8 cut(s) 104, 252, 296, 311, 318, 347, 369, 434
FatI CATG 2 cut(s) 309, 367
FauI CCCGC 1 cut(s) 484
FokI GGATG 1 cut(s) 83
HaeIII GGCC 1 cut(s) 186
Hin1II CATG 2 cut(s) 313, 371
HindIII AAGCTT 2 cut(s) 163, 452
HinfI GANTC 2 cut(s) 63, 298
HphI GGTGA 1 cut(s) 181
Hpy188I TCNGA 2 cut(s) 14, 24
Hpy188III TCNNGA 2 cut(s) 209, 223
HpyAV CCTTC 2 cut(s) 215, 294
HpyCH4V TGCA 6 cut(s) 56, 174, 218, 263, 371, 505
HpyF10VI GCNNNNNNNGC 3 cut(s) 85, 171, 269
HpyF3I CTNAG 2 cut(s) 23, 302
Hsp92II CATG 2 cut(s) 313, 371
Kzo9I GATC 1 cut(s) 225
LmnI GCTCC 1 cut(s) 179
LpnPI CCDG 7 cut(s) 52, 123, 168, 222, 275, 289, 389
MalI GATC 1 cut(s) 227
MboI GATC 1 cut(s) 225
MboII GAAGA 2 cut(s) 55, 124
MfeI CAATTG 1 cut(s) 240
MhlI GDGCHC 1 cut(s) 341
MluCI AATT 2 cut(s) 57, 240
MlyI GAGTC 1 cut(s) 72
MnlI CCTC 5 cut(s) 18, 197, 239, 325, 396
MroXI GAANNNNTTC 2 cut(s) 8, 283
MseI TTAA 3 cut(s) 363, 456, 471
MssI GTTTAAAC 1 cut(s) 472
MunI CAATTG 1 cut(s) 240
MwoI GCNNNNNNNGC 3 cut(s) 85, 171, 269
NdeII GATC 1 cut(s) 225
NlaIII CATG 2 cut(s) 313, 371
PdmI GAANNNNTTC 2 cut(s) 8, 283
PfeI GAWTC 1 cut(s) 298
PleI GAGTC 1 cut(s) 71
PmeI GTTTAAAC 1 cut(s) 472
PpsI GAGTC 1 cut(s) 71
RsaI GTAC 1 cut(s) 308
RsaNI GTAC 1 cut(s) 307
SaqAI TTAA 3 cut(s) 363, 456, 471
Sau3AI GATC 1 cut(s) 225
SchI GAGTC 1 cut(s) 72
SduI GDGCHC 1 cut(s) 341
SetI ASST 9 cut(s) 52, 125, 167, 184, 274, 308, 456, 470, 501
SmlI CTYRAG 1 cut(s) 494
SmoI CTYRAG 1 cut(s) 494
Sse9I AATT 2 cut(s) 57, 240
SsiI CCGC 1 cut(s) 477
StyI CCWWGG 1 cut(s) 107
TasI AATT 2 cut(s) 57, 240
TfiI GAWTC 1 cut(s) 298
Tru1I TTAA 3 cut(s) 363, 456, 471
Tru9I TTAA 3 cut(s) 363, 456, 471
TspDTI ATGAA 3 cut(s) 17, 267, 311
XmnI GAANNNNTTC 2 cut(s) 8, 283
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.