Rh7AG021300

Glycosyltransferase-like domain-containing protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
1419887 .. 1420159
273 bp
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UTR
Exon/CDS
Intron
Rh7AG021300.1

Sequence Viewer

Length: 273 bp
ATGAATTTGCTGATGTGGTTATTCCGCTCTATATTAATTCTCAAAAATATGATGGAGAAGTTCAATTTCTTATCACTGACAAACGATCTTGGTGGATTACAAAGGACAAAGCAGTACTACAAGGACTATCCGAGTATGAAGGATGAGGCTATTAACATTGATGGAGATGTAGTCCACTGCTTCCCAAGCACAACAGTTGGCCTTAAACGACATCCCAAGGATCTGATCCTTGATCCTTCACTATATTCCTATTCTATGAAAGAGATTTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

90

Amino Acids

10.52

Weight (kDa)

7.84

Isoelectric Point (pI)

46.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 27
AciI CCGC 1 cut(s) 25
AclWI GGATC 3 cut(s) 220, 227, 228
AcsI RAATTY 1 cut(s) 4
AfaI GTAC 1 cut(s) 116
AgsI TTSAA 1 cut(s) 64
AlwI GGATC 3 cut(s) 220, 227, 228
AoxI GGCC 1 cut(s) 199
ApoI RAATTY 1 cut(s) 4
AseI ATTAAT 1 cut(s) 35
BccI CCATC 2 cut(s) 46, 155
BfaI CTAG 1 cut(s) 271
BmcAI AGTACT 1 cut(s) 116
BsaJI CCNNGG 1 cut(s) 216
BsaXI ACNNNNNCTCC 2 cut(s) 156, 186
BseDI CCNNGG 1 cut(s) 216
BseGI GGATG 2 cut(s) 148, 211
BshFI GGCC 1 cut(s) 201
BsnI GGCC 1 cut(s) 201
Bsp143I GATC 4 cut(s) 85, 220, 225, 232
BspACI CCGC 1 cut(s) 25
BspANI GGCC 1 cut(s) 201
BspPI GGATC 3 cut(s) 220, 227, 228
BsrBI CCGCTC 1 cut(s) 27
BssECI CCNNGG 1 cut(s) 216
BssMI GATC 4 cut(s) 85, 220, 225, 232
BssT1I CCWWGG 1 cut(s) 216
Bst4CI ACNGT 1 cut(s) 196
BstF5I GGATG 2 cut(s) 148, 211
BstKTI GATC 4 cut(s) 88, 223, 228, 235
BstMBI GATC 4 cut(s) 85, 220, 225, 232
BstMWI GCNNNNNNNGC 1 cut(s) 186
BstX2I RGATCY 1 cut(s) 220
BstYI RGATCY 1 cut(s) 220
BsuRI GGCC 1 cut(s) 201
BtsCI GGATG 2 cut(s) 148, 211
BtsI GCAGTG 1 cut(s) 175
BtsIMutI CAGTG 2 cut(s) 74, 175
Csp6I GTAC 1 cut(s) 115
CviJI RGCY 2 cut(s) 149, 201
CviKI_1 RGCY 2 cut(s) 149, 201
CviQI GTAC 1 cut(s) 115
DpnI GATC 4 cut(s) 87, 222, 227, 234
DpnII GATC 4 cut(s) 85, 220, 225, 232
Eco130I CCWWGG 1 cut(s) 216
EcoT14I CCWWGG 1 cut(s) 216
ErhI CCWWGG 1 cut(s) 216
FaiI YATR 5 cut(s) 32, 50, 137, 244, 257
FokI GGATG 2 cut(s) 155, 198
FspBI CTAG 1 cut(s) 271
HaeIII GGCC 1 cut(s) 201
Hpy166II GTNNAC 1 cut(s) 175
Hpy188I TCNGA 2 cut(s) 132, 225
Hpy8I GTNNAC 1 cut(s) 175
HpyAV CCTTC 2 cut(s) 133, 246
HpyCH4III ACNGT 1 cut(s) 196
HpyF10VI GCNNNNNNNGC 1 cut(s) 186
Kzo9I GATC 4 cut(s) 85, 220, 225, 232
MaeI CTAG 1 cut(s) 271
MalI GATC 4 cut(s) 87, 222, 227, 234
MbiI CCGCTC 1 cut(s) 27
MboI GATC 4 cut(s) 85, 220, 225, 232
MflI RGATCY 1 cut(s) 220
MluCI AATT 3 cut(s) 4, 36, 64
MnlI CCTC 1 cut(s) 139
MseI TTAA 3 cut(s) 35, 153, 204
MwoI GCNNNNNNNGC 1 cut(s) 186
NdeII GATC 4 cut(s) 85, 220, 225, 232
PshBI ATTAAT 1 cut(s) 35
PsuI RGATCY 1 cut(s) 220
RsaI GTAC 1 cut(s) 116
RsaNI GTAC 1 cut(s) 115
SaqAI TTAA 3 cut(s) 35, 153, 204
Sau3AI GATC 4 cut(s) 85, 220, 225, 232
ScaI AGTACT 1 cut(s) 116
SgeI CNNG 6 cut(s) 101, 133, 144, 198, 229, 242
Sse9I AATT 3 cut(s) 4, 36, 64
SsiI CCGC 1 cut(s) 25
SspMI CTAG 1 cut(s) 271
StyI CCWWGG 1 cut(s) 216
TaaI ACNGT 1 cut(s) 196
TasI AATT 3 cut(s) 4, 36, 64
TatI WGTACW 1 cut(s) 114
Tru1I TTAA 3 cut(s) 35, 153, 204
Tru9I TTAA 3 cut(s) 35, 153, 204
TscAI CASTG 2 cut(s) 81, 182
TspDTI ATGAA 3 cut(s) 17, 152, 272
TspRI CASTG 2 cut(s) 81, 182
VspI ATTAAT 1 cut(s) 35
XapI RAATTY 1 cut(s) 4
XspI CTAG 1 cut(s) 271
ZrmI AGTACT 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.