Rh7BG021200

Glycosyltransferase-like domain-containing protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
1539376 .. 1540032
657 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG021200.1

Sequence Viewer

Length: 657 bp
ATGGGTGTTGATCTCAAAATGCTAGCCCTCAGTGAGACAAAGATATCAGAACCAATTTGCAATGTTATGGAACCAAGATCTGAATTCTGCGAGATTGAGAATAGGGATGTTCGGGTCAATGGAAAAGTGTCCTCAGTGTATGTTGTTTCATCTCAAAGGGAGAATGTGATAGAAGCTGGGAATAACTCATGGAATATAAGACCTTATGCTCGAAAAGACGATGTAAAAGCAATAAGCCTCATTAGGAAATGGTCAGTGAAACAAGTAAGTACTGGTGATCACCAGGAATCAATCCCTAAATGTACCAGAAATCATAGTGTTCCAGCCATCTTGTTTTCTCTTGGTGGATATACATTAAATCAGTACCATGACTTTGCTGATGTGATCATTCCACTCTATGTTACTTCTCGAAAATACAATGGAGAAGTTCAGTTCCTTATCACTGAGAATCGTATTAAGTGGATTCAAAAGTTCCAAGAAATACTAAAAGGACTTTCCAAGTATGAGCTTATTGACATTGACAAAGAATTAGAACAAGTCCATTGCTTTCCAAGCGTAACGGTTGGCCTGAAAACATCTCGCAAGGAAATGACCTTTGATCCTTTGAGATATTCATATTCTATGAAAGACTTCAGAGGGTTTCTAAGAACCACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

218

Amino Acids

25.21

Weight (kDa)

8.79

Isoelectric Point (pI)

35.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 593
AcsI RAATTY 1 cut(s) 83
AcuI CTGAAG 1 cut(s) 616
AfaI GTAC 3 cut(s) 271, 304, 365
AgsI TTSAA 1 cut(s) 467
AjnI CCWGG 1 cut(s) 282
AluBI AGCT 2 cut(s) 176, 508
AluI AGCT 2 cut(s) 176, 508
Alw26I GTCTC 1 cut(s) 29
AlwI GGATC 1 cut(s) 593
AoxI GGCC 1 cut(s) 565
ApoI RAATTY 1 cut(s) 83
Asp700I GAANNNNTTC 1 cut(s) 629
AsuHPI GGTGA 2 cut(s) 272, 287
AsuNHI GCTAGC 1 cut(s) 22
BccI CCATC 1 cut(s) 335
BciT130I CCWGG 1 cut(s) 284
BclI TGATCA 2 cut(s) 277, 384
BcoDI GTCTC 1 cut(s) 29
BfaI CTAG 1 cut(s) 23
BglII AGATCT 1 cut(s) 77
BmcAI AGTACT 1 cut(s) 271
Bme1390I CCNGG 1 cut(s) 284
BmiI GGNNCC 1 cut(s) 72
BmrFI CCNGG 1 cut(s) 284
BmtI GCTAGC 1 cut(s) 26
Bse1I ACTGG 1 cut(s) 277
Bse3DI GCAATG 2 cut(s) 67, 541
BseBI CCWGG 1 cut(s) 284
BseGI GGATG 1 cut(s) 112
BseMI GCAATG 2 cut(s) 67, 541
BseMII CTCAG 3 cut(s) 43, 147, 435
BseNI ACTGG 1 cut(s) 277
BseYI CCCAGC 1 cut(s) 176
BshFI GGCC 1 cut(s) 567
BsmAI GTCTC 1 cut(s) 29
BsnI GGCC 1 cut(s) 567
Bsp143I GATC 5 cut(s) 10, 77, 277, 384, 598
BspANI GGCC 1 cut(s) 567
BspCNI CTCAG 3 cut(s) 42, 146, 436
BspLI GGNNCC 1 cut(s) 72
BspOI GCTAGC 1 cut(s) 26
BspPI GGATC 1 cut(s) 593
BsrDI GCAATG 2 cut(s) 67, 541
BsrI ACTGG 1 cut(s) 277
BssMI GATC 5 cut(s) 10, 77, 277, 384, 598
Bst2UI CCWGG 1 cut(s) 284
Bst4CI ACNGT 1 cut(s) 562
BstC8I GCNNGC 1 cut(s) 24
BstDEI CTNAG 4 cut(s) 29, 133, 444, 644
BstF5I GGATG 1 cut(s) 112
BstKTI GATC 5 cut(s) 13, 80, 280, 387, 601
BstMAI GTCTC 1 cut(s) 29
BstMBI GATC 5 cut(s) 10, 77, 277, 384, 598
BstMWI GCNNNNNNNGC 1 cut(s) 552
BstNI CCWGG 1 cut(s) 284
BstSCI CCNGG 1 cut(s) 282
BstX2I RGATCY 1 cut(s) 77
BstYI RGATCY 1 cut(s) 77
BsuRI GGCC 1 cut(s) 567
BtsCI GGATG 1 cut(s) 112
BtsIMutI CAGTG 4 cut(s) 37, 141, 261, 441
Cac8I GCNNGC 1 cut(s) 24
Csp6I GTAC 3 cut(s) 270, 303, 364
CviAII CATG 2 cut(s) 189, 368
CviJI RGCY 6 cut(s) 26, 176, 237, 326, 508, 567
CviKI_1 RGCY 6 cut(s) 26, 176, 237, 326, 508, 567
CviQI GTAC 3 cut(s) 270, 303, 364
DdeI CTNAG 4 cut(s) 29, 133, 444, 644
DpnI GATC 5 cut(s) 12, 79, 279, 386, 600
DpnII GATC 5 cut(s) 10, 77, 277, 384, 598
Eco32I GATATC 1 cut(s) 45
Eco57I CTGAAG 1 cut(s) 616
EcoRI GAATTC 1 cut(s) 83
EcoRII CCWGG 1 cut(s) 282
EcoRV GATATC 1 cut(s) 45
FaeI CATG 2 cut(s) 192, 371
FalI AAGNNNNNCTT 1 cut(s) 637
FatI CATG 2 cut(s) 188, 367
FbaI TGATCA 2 cut(s) 277, 384
FokI GGATG 1 cut(s) 119
FspBI CTAG 1 cut(s) 23
GsaI CCCAGC 1 cut(s) 180
HaeIII GGCC 1 cut(s) 567
Hin1II CATG 2 cut(s) 192, 371
HinfI GANTC 3 cut(s) 287, 448, 463
HphI GGTGA 2 cut(s) 272, 287
Hpy188I TCNGA 3 cut(s) 49, 82, 635
Hpy188III TCNNGA 1 cut(s) 408
HpyCH4III ACNGT 1 cut(s) 562
HpyCH4V TGCA 1 cut(s) 60
HpyF10VI GCNNNNNNNGC 1 cut(s) 552
HpyF3I CTNAG 4 cut(s) 29, 133, 444, 644
Hsp92II CATG 2 cut(s) 192, 371
Ksp22I TGATCA 2 cut(s) 277, 384
Kzo9I GATC 5 cut(s) 10, 77, 277, 384, 598
LpnPI CCDG 7 cut(s) 162, 258, 269, 296, 319, 336, 581
MaeI CTAG 1 cut(s) 23
MaeIII GTNAC 2 cut(s) 400, 556
MalI GATC 5 cut(s) 12, 79, 279, 386, 600
MboI GATC 5 cut(s) 10, 77, 277, 384, 598
MflI RGATCY 1 cut(s) 77
MluCI AATT 3 cut(s) 54, 83, 527
MnlI CCTC 4 cut(s) 38, 142, 248, 629
MroXI GAANNNNTTC 1 cut(s) 629
MseI TTAA 3 cut(s) 356, 456, 655
MspR9I CCNGG 1 cut(s) 284
MvaI CCWGG 1 cut(s) 284
MwoI GCNNNNNNNGC 1 cut(s) 552
NdeII GATC 5 cut(s) 10, 77, 277, 384, 598
NheI GCTAGC 1 cut(s) 22
NlaIII CATG 2 cut(s) 192, 371
NlaIV GGNNCC 1 cut(s) 72
PdmI GAANNNNTTC 1 cut(s) 629
PfeI GAWTC 3 cut(s) 287, 448, 463
Psp6I CCWGG 1 cut(s) 282
PspFI CCCAGC 1 cut(s) 176
PspGI CCWGG 1 cut(s) 282
PspN4I GGNNCC 1 cut(s) 72
PsuI RGATCY 1 cut(s) 77
RsaI GTAC 3 cut(s) 271, 304, 365
RsaNI GTAC 3 cut(s) 270, 303, 364
SaqAI TTAA 3 cut(s) 356, 456, 655
Sau3AI GATC 5 cut(s) 10, 77, 277, 384, 598
ScaI AGTACT 1 cut(s) 271
ScrFI CCNGG 1 cut(s) 284
SetI ASST 4 cut(s) 178, 205, 510, 596
Sse9I AATT 3 cut(s) 54, 83, 527
SspMI CTAG 1 cut(s) 23
StyD4I CCNGG 1 cut(s) 282
TaaI ACNGT 1 cut(s) 562
TaqI TCGA 2 cut(s) 211, 409
TasI AATT 3 cut(s) 54, 83, 527
TatI WGTACW 1 cut(s) 269
TfiI GAWTC 3 cut(s) 287, 448, 463
Tru1I TTAA 3 cut(s) 356, 456, 655
Tru9I TTAA 3 cut(s) 356, 456, 655
TscAI CASTG 4 cut(s) 37, 141, 261, 448
TspDTI ATGAA 3 cut(s) 138, 603, 638
TspRI CASTG 4 cut(s) 37, 141, 261, 448
XapI RAATTY 1 cut(s) 83
XmnI GAANNNNTTC 1 cut(s) 629
XspI CTAG 1 cut(s) 23
ZrmI AGTACT 1 cut(s) 271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.