Prupe.5G227200_v2.0.a1

Glycosyltransferase-like domain-containing protein 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0001096
Physical Location & Seq
Reverse (-)
17489242 .. 17490975
1734 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G227200.1

Sequence Viewer

Length: 1278 bp
ATGAAGCACGATTCTGTACTTGCCAGAAGCTTTGCTCACCATCAGCAGAAGAGGTTACGATACGGAGCATTTGCTTGCTGCTTGCTCCTACCATTATACTTTTGCACGGTGCTCAGGCCTAGTTTGAATCTATTAGTTTTTTCAAAAGTCGTGACAAAGAATTTGGAGCCAATTTGCAATGTTTTGGAACCAAGAACCAATTTTTGCGAGATCAACAGGGATGTTCGGGTTGATGGAAAATCGTCGACAGTTTCTATTGTTTCATCTCAAATGGATGTGTTGGCAGGGAATAGCCCCTGGACTATAAGACCTTATGCTCGAAAAGAAGACAAAAGGCCAATGAATCACACTCGAGCATGGTCAGTAAAACCAGTCATTGGTGACCAGGAAATCCCTCGATGCTCCCGAAATCATAGTGTTCCAGCCATCTTGTTTTCAAATGGAGGATATACAGGAAACCATTTCCATGAATTTACTGATATAGTAGTTCCACTCTATATTACTTCTCGAAAATATGACGGAGAAGTTCAGTTTCTTATTTCGGATTTACGAACTTGGTGGGTTGCAAAGTTCCAAGCAATACTAAAAGGACTTTCTAATTATGAGTTTCTTGACATTGACAAAGAAGCAGTCCACTGCTTTCCAAGCATAACTGTTGGCCTCAAAAGACATCCAAAGGATCTGACCATTGATCCTTCAAAACATTCATATTCTATGAAAGACTTCAGAGAGTTCTTAAGAAACACTTATTCATTGAAGAGGACTAATGCAATCAGAATCAGAGATGGTCAACGTAAAAAGCCCCGGCTTCTGATCATCTCAAGATGGAGGACAAGGTGTTTCACGAATTTAAGACAAATTACTAAGATGGCTAGAACCTTGGGGTACAAGGTAACTGTTGAAGAAGCAGACAGGAATATGTCAAGAATTGCACAAGTTGTGAATTCTTGTGATGTGTTAATGGGAGTTCATGGAGCTGGCCTCACAAACATTCTTTTCCTTCCTGAAAATTCAATTTTTATCCAAATACTACCTATTGGAGGGTTCGAATGGATTGCAACAAACTACTTCGGAGTGCCTTCAAGGGGTATGAATCTAAACTACTTGGAATATAAAGTAAGCAAAGAGGAGAGCACACTGAAAAATGACCCTCACACAACTCCAATACGAGGATGGGAAGGATTCAAGTCAACTTTTCTGAATGCGCAAAATATAAAGCTTAACGTCAATAGGTTTAGACCCACTCTGTTAAAAGCTCTTGAACTTCTGCATTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00514 ko00515 ko01100 map00514 map00515 map01100
Pfam Domains
Protein Families
DUF563

Protein Analysis

426

Amino Acids

49.01

Weight (kDa)

9.77

Isoelectric Point (pI)

36.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1206
AccB7I CCANNNNNTGG 1 cut(s) 377
AccI GTMKAC 1 cut(s) 245
AclWI GGATC 2 cut(s) 686, 687
AcsI RAATTY 5 cut(s) 160, 470, 847, 943, 1009
AcuI CTGAAG 1 cut(s) 709
AfaI GTAC 2 cut(s) 18, 887
AfiI CCNNNNNNNGG 4 cut(s) 377, 1040, 1085, 1169
AflII CTTAAG 1 cut(s) 736
AjnI CCWGG 2 cut(s) 296, 384
AluBI AGCT 4 cut(s) 30, 977, 1219, 1256
AluI AGCT 4 cut(s) 30, 977, 1219, 1256
Alw21I GWGCWC 2 cut(s) 114, 1136
AlwI GGATC 2 cut(s) 686, 687
Ama87I CYCGRG 1 cut(s) 351
AoxI GGCC 4 cut(s) 116, 335, 658, 979
ApeKI GCWGC 1 cut(s) 78
ApoI RAATTY 5 cut(s) 160, 470, 847, 943, 1009
ArsI GACNNNNNNTTYG 4 cut(s) 145, 177, 615, 647
Asp700I GAANNNNTTC 1 cut(s) 722
AspLEI GCGC 1 cut(s) 1207
AsuC2I CCSGG 1 cut(s) 805
AsuHPI GGTGA 2 cut(s) 29, 392
AsuII TTCGAA 1 cut(s) 1047
AvaI CYCGRG 1 cut(s) 351
BbsI GAAGAC 1 cut(s) 333
Bbv12I GWGCWC 2 cut(s) 114, 1136
BbvI GCAGC 1 cut(s) 65
BccI CCATC 7 cut(s) 48, 227, 434, 779, 819, 862, 1167
BcgI CGANNNNNNTGC 2 cut(s) 1037, 1071
BciT130I CCWGG 2 cut(s) 298, 386
BclI TGATCA 1 cut(s) 813
BcnI CCSGG 1 cut(s) 805
BfaI CTAG 2 cut(s) 120, 873
BfrI CTTAAG 1 cut(s) 736
BisI GCNGC 1 cut(s) 79
BlsI GCNGC 1 cut(s) 80
Bme1390I CCNGG 3 cut(s) 298, 386, 805
BmeT110I CYCGRG 1 cut(s) 351
BmiI GGNNCC 2 cut(s) 168, 189
BmrFI CCNGG 3 cut(s) 298, 386, 805
BmsI GCATC 1 cut(s) 389
BpiI GAAGAC 1 cut(s) 333
BplI GAGNNNNNCTC 2 cut(s) 966, 998
Bpu10I CCTNAGC 1 cut(s) 113
Bpu14I TTCGAA 1 cut(s) 1047
BpuEI CTTGAG 1 cut(s) 805
BpuMI CCSGG 1 cut(s) 805
BsaJI CCNNGG 3 cut(s) 296, 803, 879
Bsc4I CCNNNNNNNGG 4 cut(s) 377, 1040, 1085, 1169
Bse1I ACTGG 1 cut(s) 371
Bse3DI GCAATG 1 cut(s) 184
BseBI CCWGG 2 cut(s) 298, 386
BseDI CCNNGG 3 cut(s) 296, 803, 879
BseGI GGATG 4 cut(s) 226, 280, 670, 1178
BseLI CCNNNNNNNGG 4 cut(s) 377, 1040, 1085, 1169
BseMI GCAATG 1 cut(s) 184
BseMII CTCAG 1 cut(s) 127
BseNI ACTGG 1 cut(s) 371
BseRI GAGGAG 1 cut(s) 1142
BseXI GCAGC 1 cut(s) 65
BshFI GGCC 4 cut(s) 118, 337, 660, 981
BsiHKAI GWGCWC 2 cut(s) 114, 1136
BsiHKCI CYCGRG 1 cut(s) 351
BsiSI CCGG 1 cut(s) 805
BslI CCNNNNNNNGG 4 cut(s) 377, 1040, 1085, 1169
BsmI GAATGC 1 cut(s) 1207
BsnI GGCC 4 cut(s) 118, 337, 660, 981
BsoBI CYCGRG 1 cut(s) 351
Bsp119I TTCGAA 1 cut(s) 1047
Bsp1286I GDGCHC 2 cut(s) 114, 1136
Bsp143I GATC 4 cut(s) 210, 679, 691, 813
BspANI GGCC 4 cut(s) 118, 337, 660, 981
BspCNI CTCAG 1 cut(s) 126
BspLI GGNNCC 2 cut(s) 168, 189
BspPI GGATC 2 cut(s) 686, 687
BspT104I TTCGAA 1 cut(s) 1047
BspTI CTTAAG 1 cut(s) 736
BsrDI GCAATG 1 cut(s) 184
BsrI ACTGG 1 cut(s) 371
BssECI CCNNGG 3 cut(s) 296, 803, 879
BssMI GATC 4 cut(s) 210, 679, 691, 813
BssT1I CCWWGG 1 cut(s) 879
Bst2UI CCWGG 2 cut(s) 298, 386
Bst4CI ACNGT 4 cut(s) 109, 250, 655, 898
Bst6I CTCTTC 2 cut(s) 44, 752
BstAFI CTTAAG 1 cut(s) 736
BstBI TTCGAA 1 cut(s) 1047
BstC8I GCNNGC 3 cut(s) 76, 83, 979
BstDEI CTNAG 2 cut(s) 113, 864
BstEII GGTNACC 1 cut(s) 380
BstENI CCTNNNNNAGG 1 cut(s) 1038
BstF5I GGATG 4 cut(s) 226, 280, 670, 1178
BstHHI GCGC 1 cut(s) 1207
BstKTI GATC 4 cut(s) 213, 682, 694, 816
BstMBI GATC 4 cut(s) 210, 679, 691, 813
BstMWI GCNNNNNNNGC 1 cut(s) 645
BstNI CCWGG 2 cut(s) 298, 386
BstPI GGTNACC 1 cut(s) 380
BstSCI CCNGG 3 cut(s) 296, 384, 803
BstV1I GCAGC 1 cut(s) 65
BstV2I GAAGAC 1 cut(s) 333
BstX2I RGATCY 1 cut(s) 679
BstYI RGATCY 1 cut(s) 679
BsuRI GGCC 4 cut(s) 118, 337, 660, 981
BtsCI GGATG 4 cut(s) 226, 280, 670, 1178
BtsI GCAGTG 1 cut(s) 634
BtsIMutI CAGTG 2 cut(s) 634, 1136
Cac8I GCNNGC 3 cut(s) 76, 83, 979
CfoI GCGC 1 cut(s) 1207
Csp6I GTAC 2 cut(s) 17, 886
CviAII CATG 3 cut(s) 357, 467, 971
CviQI GTAC 2 cut(s) 17, 886
DdeI CTNAG 2 cut(s) 113, 864
DpnI GATC 4 cut(s) 212, 681, 693, 815
DpnII GATC 4 cut(s) 210, 679, 691, 813
Eam1104I CTCTTC 2 cut(s) 44, 752
EarI CTCTTC 2 cut(s) 44, 752
Eco130I CCWWGG 1 cut(s) 879
Eco147I AGGCCT 1 cut(s) 118
Eco57I CTGAAG 1 cut(s) 709
Eco88I CYCGRG 1 cut(s) 351
Eco91I GGTNACC 1 cut(s) 380
EcoNI CCTNNNNNAGG 1 cut(s) 1038
EcoO65I GGTNACC 1 cut(s) 380
EcoRI GAATTC 1 cut(s) 943
EcoRII CCWGG 2 cut(s) 296, 384
EcoT14I CCWWGG 1 cut(s) 879
ErhI CCWWGG 1 cut(s) 879
FaeI CATG 3 cut(s) 360, 470, 974
FalI AAGNNNNNCTT 2 cut(s) 730, 762
FatI CATG 3 cut(s) 356, 466, 970
FbaI TGATCA 1 cut(s) 813
FblI GTMKAC 1 cut(s) 245
Fnu4HI GCNGC 1 cut(s) 79
FokI GGATG 4 cut(s) 233, 287, 657, 1185
Fsp4HI GCNGC 1 cut(s) 79
FspBI CTAG 2 cut(s) 120, 873
FspI TGCGCA 1 cut(s) 1206
GlaI GCGC 1 cut(s) 1206
GluI GCNGC 1 cut(s) 79
HaeIII GGCC 4 cut(s) 118, 337, 660, 981
HapII CCGG 1 cut(s) 805
HhaI GCGC 1 cut(s) 1207
Hin1II CATG 3 cut(s) 360, 470, 974
Hin6I GCGC 1 cut(s) 1205
HinP1I GCGC 1 cut(s) 1205
HincII GTYRAC 3 cut(s) 246, 791, 1191
HindII GTYRAC 3 cut(s) 246, 791, 1191
HindIII AAGCTT 2 cut(s) 28, 1217
HinfI GANTC 6 cut(s) 11, 127, 343, 777, 1093, 1182
HpaII CCGG 1 cut(s) 805
HphI GGTGA 2 cut(s) 29, 392
Hpy166II GTNNAC 4 cut(s) 246, 634, 791, 1191
Hpy188I TCNGA 8 cut(s) 544, 684, 728, 776, 782, 813, 1073, 1200
Hpy188III TCNNGA 9 cut(s) 151, 405, 507, 611, 822, 844, 924, 1004, 1259
Hpy8I GTNNAC 4 cut(s) 246, 634, 791, 1191
Hpy99I CGWCG 1 cut(s) 247
HpyAV CCTTC 4 cut(s) 705, 1010, 1089, 1172
HpyCH4III ACNGT 4 cut(s) 109, 250, 655, 898
HpyCH4IV ACGT 2 cut(s) 793, 1224
HpyCH4V TGCA 7 cut(s) 105, 177, 566, 770, 932, 1058, 1270
HpyF10VI GCNNNNNNNGC 1 cut(s) 645
HpyF3I CTNAG 2 cut(s) 113, 864
HpySE526I ACGT 2 cut(s) 793, 1224
Hsp92II CATG 3 cut(s) 360, 470, 974
HspAI GCGC 1 cut(s) 1205
Ksp22I TGATCA 1 cut(s) 813
Kzo9I GATC 4 cut(s) 210, 679, 691, 813
LmnI GCTCC 5 cut(s) 65, 90, 166, 407, 974
Lsp1109I GCAGC 1 cut(s) 65
LweI GCATC 1 cut(s) 389
MaeI CTAG 2 cut(s) 120, 873
MaeII ACGT 2 cut(s) 793, 1224
MaeIII GTNAC 4 cut(s) 54, 151, 380, 892
MalI GATC 4 cut(s) 212, 681, 693, 815
MboI GATC 4 cut(s) 210, 679, 691, 813
MboII GAAGA 4 cut(s) 61, 338, 769, 914
MflI RGATCY 1 cut(s) 679
MhlI GDGCHC 2 cut(s) 114, 1136
MroXI GAANNNNTTC 1 cut(s) 722
MseI TTAA 6 cut(s) 737, 851, 959, 1221, 1250, 1276
MslI CAYNNNNRTG 1 cut(s) 465
MspCI CTTAAG 1 cut(s) 736
MspI CCGG 1 cut(s) 805
MspR9I CCNGG 3 cut(s) 298, 386, 805
Mva1269I GAATGC 1 cut(s) 1207
MvaI CCWGG 2 cut(s) 298, 386
MwoI GCNNNNNNNGC 1 cut(s) 645
NciI CCSGG 1 cut(s) 805
NdeII GATC 4 cut(s) 210, 679, 691, 813
NlaIII CATG 3 cut(s) 360, 470, 974
NlaIV GGNNCC 2 cut(s) 168, 189
NmuCI GTSAC 2 cut(s) 151, 380
NsbI TGCGCA 1 cut(s) 1206
NspV TTCGAA 1 cut(s) 1047
PaeR7I CTCGAG 1 cut(s) 351
PceI AGGCCT 1 cut(s) 118
PcsI WCGNNNNNNNCGW 1 cut(s) 403
PctI GAATGC 1 cut(s) 1207
PdmI GAANNNNTTC 1 cut(s) 722
PfeI GAWTC 6 cut(s) 11, 127, 343, 777, 1093, 1182
PflMI CCANNNNNTGG 1 cut(s) 377
PkrI GCNGC 1 cut(s) 80
Psp6I CCWGG 2 cut(s) 296, 384
PspEI GGTNACC 1 cut(s) 380
PspGI CCWGG 2 cut(s) 296, 384
PspN4I GGNNCC 2 cut(s) 168, 189
PspXI VCTCGAGB 1 cut(s) 351
PsuI RGATCY 1 cut(s) 679
RsaI GTAC 2 cut(s) 18, 887
RsaNI GTAC 2 cut(s) 17, 886
RseI CAYNNNNRTG 1 cut(s) 465
SalI GTCGAC 1 cut(s) 244
SaqAI TTAA 6 cut(s) 737, 851, 959, 1221, 1250, 1276
SatI GCNGC 1 cut(s) 79
Sau3AI GATC 4 cut(s) 210, 679, 691, 813
ScrFI CCNGG 3 cut(s) 298, 386, 805
SduI GDGCHC 2 cut(s) 114, 1136
SfaNI GCATC 1 cut(s) 389
Sfr274I CTCGAG 1 cut(s) 351
SfuI TTCGAA 1 cut(s) 1047
SlaI CTCGAG 1 cut(s) 351
SmiMI CAYNNNNRTG 1 cut(s) 465
SmlI CTYRAG 3 cut(s) 351, 736, 820
SmoI CTYRAG 3 cut(s) 351, 736, 820
SseBI AGGCCT 1 cut(s) 118
SspMI CTAG 2 cut(s) 120, 873
StuI AGGCCT 1 cut(s) 118
StyD4I CCNGG 3 cut(s) 296, 384, 803
StyI CCWWGG 1 cut(s) 879
TaaI ACNGT 4 cut(s) 109, 250, 655, 898
TaiI ACGT 2 cut(s) 796, 1227
TaqI TCGA 6 cut(s) 245, 319, 352, 397, 508, 1047
TatI WGTACW 1 cut(s) 16
TfiI GAWTC 6 cut(s) 11, 127, 343, 777, 1093, 1182
Tru1I TTAA 6 cut(s) 737, 851, 959, 1221, 1250, 1276
Tru9I TTAA 6 cut(s) 737, 851, 959, 1221, 1250, 1276
TscAI CASTG 2 cut(s) 641, 1143
TseFI GTSAC 2 cut(s) 151, 380
TseI GCWGC 1 cut(s) 78
Tsp45I GTSAC 2 cut(s) 151, 380
TspDTI ATGAA 9 cut(s) 17, 252, 356, 483, 696, 731, 741, 959, 1106
TspGWI ACGGA 2 cut(s) 78, 534
TspRI CASTG 2 cut(s) 641, 1143
Van91I CCANNNNNTGG 1 cut(s) 377
Vha464I CTTAAG 1 cut(s) 736
XagI CCTNNNNNAGG 1 cut(s) 1038
XapI RAATTY 5 cut(s) 160, 470, 847, 943, 1009
XcmI CCANNNNNNNNNTGG 1 cut(s) 1170
XhoI CTCGAG 1 cut(s) 351
XmiI GTMKAC 1 cut(s) 245
XmnI GAANNNNTTC 1 cut(s) 722
XspI CTAG 2 cut(s) 120, 873
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.