Rmu_sc0000888.1_g000026

Glycosyltransferase-like domain-containing protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000888.1
Physical Location & Seq
Forward (+)
104503 .. 104850
348 bp
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UTR
Exon/CDS
Intron
Rmu_sc0000888.1_g000026.1.cds

Sequence Viewer

Length: 348 bp
atgggagttcacggagctggcctcaccaacattctgttccttcctgataatgcaatcttgatccaaatacttccaattggagggtatgaatggactgcaaagacagcttttggaaacccttcacaggatatgaatctcaggtacatggagtataagataagcaatgaggagagcacactcatacaacaatacccacttaaccatgcagtttttactgaccctcactctattgcgaaacaggggtggaaagcattcaagtcaatccttatggataagcaaaatgtaaagcttaatgtcaataggtttaaacccgttttgttgaaagcccttgagcttctacatcagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

115

Amino Acids

13.05

Weight (kDa)

8.93

Isoelectric Point (pI)

33.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 55
AfaI GTAC 1 cut(s) 143
AfiI CCNNNNNNNGG 2 cut(s) 80, 124
AgsI TTSAA 2 cut(s) 256, 322
AjuI GAANNNNNNNTTGG 2 cut(s) 20, 52
AluBI AGCT 4 cut(s) 17, 107, 289, 334
AluI AGCT 4 cut(s) 17, 107, 289, 334
Alw21I GWGCWC 1 cut(s) 176
AlwI GGATC 1 cut(s) 55
AoxI GGCC 1 cut(s) 19
Asp700I GAANNNNTTC 2 cut(s) 118, 251
AsuHPI GGTGA 1 cut(s) 16
Bbv12I GWGCWC 1 cut(s) 176
BplI GAGNNNNNCTC 1 cut(s) 38
BsaBI GATNNNNATC 1 cut(s) 132
Bsc4I CCNNNNNNNGG 2 cut(s) 80, 124
Bse3DI GCAATG 1 cut(s) 169
Bse8I GATNNNNATC 1 cut(s) 132
BseJI GATNNNNATC 1 cut(s) 132
BseLI CCNNNNNNNGG 2 cut(s) 80, 124
BseMI GCAATG 1 cut(s) 169
BseMII CTCAG 1 cut(s) 151
BseRI GAGGAG 1 cut(s) 182
BshFI GGCC 1 cut(s) 21
BsiHKAI GWGCWC 1 cut(s) 176
BslI CCNNNNNNNGG 2 cut(s) 80, 124
BsmI GAATGC 1 cut(s) 251
BsnI GGCC 1 cut(s) 21
Bsp1286I GDGCHC 1 cut(s) 176
Bsp143I GATC 1 cut(s) 60
BspANI GGCC 1 cut(s) 21
BspCNI CTCAG 1 cut(s) 150
BspPI GGATC 1 cut(s) 55
BsrDI GCAATG 1 cut(s) 169
BssMI GATC 1 cut(s) 60
BstC8I GCNNGC 1 cut(s) 19
BstDEI CTNAG 1 cut(s) 137
BstKTI GATC 1 cut(s) 63
BstMBI GATC 1 cut(s) 60
BstMWI GCNNNNNNNGC 1 cut(s) 104
BsuRI GGCC 1 cut(s) 21
Cac8I GCNNGC 1 cut(s) 19
Csp6I GTAC 1 cut(s) 142
CviAII CATG 2 cut(s) 145, 203
CviJI RGCY 6 cut(s) 17, 21, 107, 289, 326, 334
CviKI_1 RGCY 6 cut(s) 17, 21, 107, 289, 326, 334
CviQI GTAC 1 cut(s) 142
DdeI CTNAG 1 cut(s) 137
DpnI GATC 1 cut(s) 62
DpnII GATC 1 cut(s) 60
DraI TTTAAA 1 cut(s) 307
FaeI CATG 2 cut(s) 148, 206
FaiI YATR 7 cut(s) 87, 131, 146, 153, 182, 204, 269
FatI CATG 2 cut(s) 144, 202
HaeIII GGCC 1 cut(s) 21
Hin1II CATG 2 cut(s) 148, 206
HindIII AAGCTT 1 cut(s) 287
HinfI GANTC 1 cut(s) 133
HphI GGTGA 1 cut(s) 16
Hpy166II GTNNAC 1 cut(s) 10
Hpy188III TCNNGA 2 cut(s) 44, 58
Hpy8I GTNNAC 1 cut(s) 10
HpyAV CCTTC 2 cut(s) 50, 129
HpyCH4V TGCA 3 cut(s) 53, 98, 206
HpyF10VI GCNNNNNNNGC 1 cut(s) 104
HpyF3I CTNAG 1 cut(s) 137
Hsp92II CATG 2 cut(s) 148, 206
Kzo9I GATC 1 cut(s) 60
LmnI GCTCC 1 cut(s) 14
LpnPI CCDG 5 cut(s) 3, 57, 110, 124, 224
MalI GATC 1 cut(s) 62
MboI GATC 1 cut(s) 60
MfeI CAATTG 1 cut(s) 75
MhlI GDGCHC 1 cut(s) 176
MluCI AATT 1 cut(s) 75
MnlI CCTC 4 cut(s) 32, 74, 160, 231
MroXI GAANNNNTTC 2 cut(s) 118, 251
MseI TTAA 3 cut(s) 198, 291, 306
MssI GTTTAAAC 1 cut(s) 307
MunI CAATTG 1 cut(s) 75
Mva1269I GAATGC 1 cut(s) 251
MwoI GCNNNNNNNGC 1 cut(s) 104
NdeII GATC 1 cut(s) 60
NlaIII CATG 2 cut(s) 148, 206
PctI GAATGC 1 cut(s) 251
PdmI GAANNNNTTC 2 cut(s) 118, 251
PfeI GAWTC 1 cut(s) 133
PmeI GTTTAAAC 1 cut(s) 307
RsaI GTAC 1 cut(s) 143
RsaNI GTAC 1 cut(s) 142
SaqAI TTAA 3 cut(s) 198, 291, 306
Sau3AI GATC 1 cut(s) 60
SduI GDGCHC 1 cut(s) 176
SetI ASST 6 cut(s) 19, 109, 143, 291, 305, 336
SmlI CTYRAG 1 cut(s) 329
SmoI CTYRAG 1 cut(s) 329
Sse9I AATT 1 cut(s) 75
TasI AATT 1 cut(s) 75
TfiI GAWTC 1 cut(s) 133
Tru1I TTAA 3 cut(s) 198, 291, 306
Tru9I TTAA 3 cut(s) 198, 291, 306
TspDTI ATGAA 2 cut(s) 102, 146
TspGWI ACGGA 1 cut(s) 27
XmnI GAANNNNTTC 2 cut(s) 118, 251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.