Prupe.5G227600_v2.0.a1

Glycosyltransferase-like domain-containing protein 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0001096
Physical Location & Seq
Reverse (-)
17498358 .. 17500704
2347 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G227600.1

Sequence Viewer

Length: 1545 bp
ATGGTGATGTATGATTCCATACTTGCCAGAAGTTTCAGTCGGCATGAGCAGAAGAAATTGAGATATGGAGCATTTGTTTGCTGCTTGCTCATAGCATTGTGCTTCTGCGCAGTGCTCAAGCCTAATTTGAATCCTCTACCAGCTTTGAAATTGCAGCGGTCAATGGGGGTCAAACACCAGATACTGGCACTCTGGGAAACAAACAGCACTCAGCAAGTAATTAAAAACATGCTCGAATATCCGGAGATAAACACAAACACGACGGAGGAGTTTGAAAATATGACTTCTCAAGTAGCGGCAGATTCTGATGATCTGCAGCAAAACGCAAGCACTCTCACTAATCCCATTGCAAGCAGCAGTCAGGCTGAAGAGGCAAAGATTGAAGAAGTGGTGACAAAGAATTTAGAGCCACTTTGCAATACCATGGAAGCAAAAACGGAATTTTGCGAGCTCAACATGGATGTTCATGTCGATGCGAAATCTTCTTCAGCGTTTGTTGTTTCATCTCAAATTGGGAATAGGTCCTGGAGTATAAGACCTTATGCTCGAAAAGAAGACAAAACGGCTATGAGCCGTACTCGAGCATGGTCAGTGAAACCAGTCATTGGTGATCTGGAAATCCCTCAATGTAACCGAAATCATAGAGTTCCTGCCATCTTGTTTTCAAATGGTGGATATACAGGAAACCATTTCCATGAGTTCACTGATGTGGTGATCCCTCTCTTTATCACTTCTAGAAAATATGATGGAGAAGTTCAATTTCTTATATCGGATATAAAACCTTTTTGGGTAACAAAGTACCAAGCAGTACTAAAAGGACTGTCCAAGTATGACATTATCGACATCGACAAAGAAGATGTTGTGCATTGCTTCCCAAGCCTAACGGTTGGCCTTAAAAGACATGAAAAGGAGCTGAGCATTGACCCTTCAAAACATTCATATTCTATGAAAGACTTCAGAGAGTTTCTAAGAAACAGTTTCTCATTGAAGAAAGCCAATGCAATCAGAATCAAAGATGGTCATCAACGAAAAAGGCCCCGGCTTCTGATCATACCAAGAAAGAGAACAAGGTCTTTCACAAATACAGGGGAAATTTCTAAAATGGCTAGACGCTTGGGATTCAAGGTGATTGTTGCAGAGGCTGACATTAACTTGTCAAAATTTGCAGAAGTCGTAAACTCTTGTGATGTGTTAATGGGAGTTCATGGAGCTGGGCTTACAAACATTCTTTTCCTTCCTGAGAATGCAGTTTTCATTCAAATACTTCCCATTGGAGGGTTCGAATGGCTGGCTACGAACGACTTTGGCGAGCCTTCACAGGATATGAATCTCAAGTATTTGGAATATAAGATAAGCAATGAGGAGAGCACGTTGATACAGCAATACCCACTGGATCATGCAGTTTTCACTGACCCTTACTCAATTGGAAAACAGGGGTGGGAAGCATTCAAGTCAATATTTTTGGAGAAACAAAATGTAAAGCTTAATGTCAATAGGTTCAGACCTACATTGTTGAAAGCCCTTGAGCTTCTGCATCAGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00514 ko00515 ko01100 map00514 map00515 map01100
Pfam Domains
Protein Families
DUF563

Protein Analysis

515

Amino Acids

58.57

Weight (kDa)

8.54

Isoelectric Point (pI)

38.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 109
AccB7I CCANNNNNTGG 2 cut(s) 184, 605
AccIII TCCGGA 1 cut(s) 241
AciI CCGC 2 cut(s) 157, 296
AclWI GGATC 2 cut(s) 709, 1401
AcsI RAATTY 4 cut(s) 400, 440, 1092, 1160
AcuI CTGAAG 3 cut(s) 387, 471, 940
AfaI GTAC 3 cut(s) 577, 800, 810
AfiI CCNNNNNNNGG 4 cut(s) 184, 605, 1274, 1275
AjnI CCWGG 1 cut(s) 524
AleI CACNNNNGTG 1 cut(s) 707
AluBI AGCT 6 cut(s) 143, 451, 913, 1211, 1483, 1528
AluI AGCT 6 cut(s) 143, 451, 913, 1211, 1483, 1528
Alw21I GWGCWC 3 cut(s) 117, 453, 1370
AlwI GGATC 2 cut(s) 709, 1401
AlwNI CAGNNNCTG 3 cut(s) 184, 305, 1142
Ama87I CYCGRG 1 cut(s) 579
Aor13HI TCCGGA 1 cut(s) 241
AoxI GGCC 2 cut(s) 889, 1034
ApeKI GCWGC 4 cut(s) 81, 154, 316, 354
ApoI RAATTY 4 cut(s) 400, 440, 1092, 1160
Asp700I GAANNNNTTC 1 cut(s) 953
AspLEI GCGC 1 cut(s) 110
AspS9I GGNCC 2 cut(s) 522, 1035
AsuC2I CCSGG 1 cut(s) 1039
AsuHPI GGTGA 5 cut(s) 16, 403, 620, 724, 1138
AsuII TTCGAA 1 cut(s) 1281
AvaI CYCGRG 1 cut(s) 579
AvaII GGWCC 1 cut(s) 522
BanII GRGCYC 1 cut(s) 453
BbsI GAAGAC 1 cut(s) 561
Bbv12I GWGCWC 3 cut(s) 117, 453, 1370
BbvI GCAGC 4 cut(s) 68, 166, 328, 366
BccI CCATC 3 cut(s) 662, 740, 1010
BceAI ACGGC 2 cut(s) 558, 579
BciT130I CCWGG 1 cut(s) 526
BclI TGATCA 1 cut(s) 1047
BcnI CCSGG 1 cut(s) 1039
BfaI CTAG 2 cut(s) 735, 1107
BfmI CTRYAG 1 cut(s) 314
BisI GCNGC 5 cut(s) 82, 155, 297, 317, 355
BlpI GCTNAGC 1 cut(s) 914
BlsI GCNGC 5 cut(s) 83, 156, 298, 318, 356
BmcAI AGTACT 1 cut(s) 810
Bme1390I CCNGG 2 cut(s) 526, 1039
Bme18I GGWCC 1 cut(s) 522
BmeT110I CYCGRG 1 cut(s) 579
BmgT120I GGNCC 2 cut(s) 522, 1035
BmiI GGNNCC 1 cut(s) 1037
BmrFI CCNGG 2 cut(s) 526, 1039
BmsI GCATC 1 cut(s) 463
BpiI GAAGAC 1 cut(s) 561
BplI GAGNNNNNCTC 2 cut(s) 562, 594
BpmI CTGGAG 1 cut(s) 547
Bpu1102I GCTNAGC 1 cut(s) 914
Bpu14I TTCGAA 1 cut(s) 1281
BpuEI CTTGAG 4 cut(s) 101, 273, 1316, 1544
BpuMI CCSGG 1 cut(s) 1039
BsaBI GATNNNNATC 2 cut(s) 1020, 1326
BsaJI CCNNGG 2 cut(s) 423, 1037
BsaWI WCCGGW 1 cut(s) 241
BsaXI ACNNNNNCTCC 4 cut(s) 60, 90, 1355, 1385
Bsc4I CCNNNNNNNGG 4 cut(s) 184, 605, 1274, 1275
Bse1I ACTGG 3 cut(s) 189, 599, 1395
Bse3DI GCAATG 3 cut(s) 345, 865, 1363
Bse8I GATNNNNATC 2 cut(s) 1020, 1326
BseAI TCCGGA 1 cut(s) 241
BseBI CCWGG 1 cut(s) 526
BseDI CCNNGG 2 cut(s) 423, 1037
BseGI GGATG 1 cut(s) 466
BseJI GATNNNNATC 2 cut(s) 1020, 1326
BseLI CCNNNNNNNGG 4 cut(s) 184, 605, 1274, 1275
BseMI GCAATG 3 cut(s) 345, 865, 1363
BseMII CTCAG 3 cut(s) 224, 905, 1230
BseNI ACTGG 3 cut(s) 189, 599, 1395
BseRI GAGGAG 2 cut(s) 281, 1376
BseXI GCAGC 4 cut(s) 68, 166, 328, 366
BseYI CCCAGC 1 cut(s) 1211
BshFI GGCC 2 cut(s) 891, 1036
BsiHKAI GWGCWC 3 cut(s) 117, 453, 1370
BsiHKCI CYCGRG 1 cut(s) 579
BsiSI CCGG 2 cut(s) 242, 1039
BslI CCNNNNNNNGG 4 cut(s) 184, 605, 1274, 1275
BsmI GAATGC 2 cut(s) 1249, 1445
BsnI GGCC 2 cut(s) 891, 1036
BsoBI CYCGRG 1 cut(s) 579
Bsp119I TTCGAA 1 cut(s) 1281
Bsp1286I GDGCHC 3 cut(s) 117, 453, 1370
Bsp13I TCCGGA 1 cut(s) 241
Bsp143I GATC 5 cut(s) 310, 610, 714, 1047, 1393
Bsp1720I GCTNAGC 1 cut(s) 914
Bsp19I CCATGG 1 cut(s) 423
BspACI CCGC 2 cut(s) 157, 296
BspANI GGCC 2 cut(s) 891, 1036
BspCNI CTCAG 3 cut(s) 223, 906, 1231
BspEI TCCGGA 1 cut(s) 241
BspLI GGNNCC 1 cut(s) 1037
BspMAI CTGCAG 1 cut(s) 318
BspPI GGATC 2 cut(s) 709, 1401
BspT104I TTCGAA 1 cut(s) 1281
BsrDI GCAATG 3 cut(s) 345, 865, 1363
BsrI ACTGG 3 cut(s) 189, 599, 1395
BssECI CCNNGG 2 cut(s) 423, 1037
BssMI GATC 5 cut(s) 310, 610, 714, 1047, 1393
BssT1I CCWWGG 1 cut(s) 423
Bst2UI CCWGG 1 cut(s) 526
Bst4CI ACNGT 3 cut(s) 822, 886, 977
Bst6I CTCTTC 1 cut(s) 363
BstBI TTCGAA 1 cut(s) 1281
BstC8I GCNNGC 6 cut(s) 86, 328, 352, 449, 1290, 1310
BstDEI CTNAG 4 cut(s) 210, 914, 968, 1239
BstDSI CCRYGG 1 cut(s) 423
BstF5I GGATG 1 cut(s) 466
BstHHI GCGC 1 cut(s) 110
BstKTI GATC 5 cut(s) 313, 613, 717, 1050, 1396
BstMBI GATC 5 cut(s) 310, 610, 714, 1047, 1393
BstMWI GCNNNNNNNGC 2 cut(s) 371, 876
BstNI CCWGG 1 cut(s) 526
BstNSI RCATGY 1 cut(s) 232
BstSCI CCNGG 2 cut(s) 524, 1037
BstSFI CTRYAG 1 cut(s) 314
BstV1I GCAGC 4 cut(s) 68, 166, 328, 366
BstV2I GAAGAC 1 cut(s) 561
BsuRI GGCC 2 cut(s) 891, 1036
BtgI CCRYGG 1 cut(s) 423
BtsCI GGATG 1 cut(s) 466
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 5 cut(s) 117, 597, 702, 1388, 1407
Cac8I GCNNGC 6 cut(s) 86, 328, 352, 449, 1290, 1310
CaiI CAGNNNCTG 3 cut(s) 184, 305, 1142
CfoI GCGC 1 cut(s) 110
Cfr13I GGNCC 2 cut(s) 522, 1035
CseI GACGC 1 cut(s) 1119
Csp6I GTAC 3 cut(s) 576, 799, 809
CviQI GTAC 3 cut(s) 576, 799, 809
DdeI CTNAG 4 cut(s) 210, 914, 968, 1239
DpnI GATC 5 cut(s) 312, 612, 716, 1049, 1395
DpnII GATC 5 cut(s) 310, 610, 714, 1047, 1393
Eam1104I CTCTTC 1 cut(s) 363
EarI CTCTTC 1 cut(s) 363
Ecl136II GAGCTC 1 cut(s) 451
Eco130I CCWWGG 1 cut(s) 423
Eco24I GRGCYC 1 cut(s) 453
Eco47I GGWCC 1 cut(s) 522
Eco53kI GAGCTC 1 cut(s) 451
Eco57I CTGAAG 3 cut(s) 387, 471, 940
Eco88I CYCGRG 1 cut(s) 579
EcoICRI GAGCTC 1 cut(s) 451
EcoO109I RGGNCCY 2 cut(s) 522, 1035
EcoRII CCWGG 1 cut(s) 524
EcoT14I CCWWGG 1 cut(s) 423
EcoT38I GRGCYC 1 cut(s) 453
ErhI CCWWGG 1 cut(s) 423
FbaI TGATCA 1 cut(s) 1047
Fnu4HI GCNGC 5 cut(s) 82, 155, 297, 317, 355
FokI GGATG 1 cut(s) 473
FriOI GRGCYC 1 cut(s) 453
Fsp4HI GCNGC 5 cut(s) 82, 155, 297, 317, 355
FspBI CTAG 2 cut(s) 735, 1107
FspI TGCGCA 1 cut(s) 109
GlaI GCGC 1 cut(s) 109
GluI GCNGC 5 cut(s) 82, 155, 297, 317, 355
GsaI CCCAGC 1 cut(s) 1215
GsuI CTGGAG 1 cut(s) 547
HaeIII GGCC 2 cut(s) 891, 1036
HapII CCGG 2 cut(s) 242, 1039
HgaI GACGC 1 cut(s) 1119
HhaI GCGC 1 cut(s) 110
Hin6I GCGC 1 cut(s) 108
HinP1I GCGC 1 cut(s) 108
HindIII AAGCTT 1 cut(s) 1481
HinfI GANTC 6 cut(s) 14, 130, 302, 1008, 1119, 1327
HpaII CCGG 2 cut(s) 242, 1039
HphI GGTGA 5 cut(s) 16, 403, 620, 724, 1138
Hpy166II GTNNAC 2 cut(s) 702, 1177
Hpy188I TCNGA 7 cut(s) 307, 772, 959, 1007, 1047, 1502, 1539
Hpy188III TCNNGA 4 cut(s) 242, 614, 735, 1238
Hpy8I GTNNAC 2 cut(s) 702, 1177
Hpy99I CGWCG 1 cut(s) 265
HpyAV CCTTC 3 cut(s) 936, 1244, 1323
HpyCH4III ACNGT 3 cut(s) 822, 886, 977
HpyCH4IV ACGT 1 cut(s) 1370
HpyF10VI GCNNNNNNNGC 2 cut(s) 371, 876
HpyF3I CTNAG 4 cut(s) 210, 914, 968, 1239
HpySE526I ACGT 1 cut(s) 1370
HspAI GCGC 1 cut(s) 108
Kpn2I TCCGGA 1 cut(s) 241
Ksp22I TGATCA 1 cut(s) 1047
Kzo9I GATC 5 cut(s) 310, 610, 714, 1047, 1393
LmnI GCTCC 3 cut(s) 68, 910, 1208
Lsp1109I GCAGC 4 cut(s) 68, 166, 328, 366
LweI GCATC 1 cut(s) 463
MaeI CTAG 2 cut(s) 735, 1107
MaeII ACGT 1 cut(s) 1370
MaeIII GTNAC 3 cut(s) 391, 629, 790
MalI GATC 5 cut(s) 312, 612, 716, 1049, 1395
MboI GATC 5 cut(s) 310, 610, 714, 1047, 1393
MboII GAAGA 8 cut(s) 64, 380, 395, 474, 477, 566, 866, 1000
MfeI CAATTG 1 cut(s) 1422
MhlI GDGCHC 3 cut(s) 117, 453, 1370
MnlI CCTC 8 cut(s) 144, 259, 364, 633, 729, 1132, 1268, 1354
MroI TCCGGA 1 cut(s) 241
MroXI GAANNNNTTC 1 cut(s) 953
MseI TTAA 5 cut(s) 222, 894, 1149, 1193, 1485
MslI CAYNNNNRTG 3 cut(s) 471, 693, 707
MspA1I CMGCKG 1 cut(s) 157
MspI CCGG 2 cut(s) 242, 1039
MspR9I CCNGG 2 cut(s) 526, 1039
MunI CAATTG 1 cut(s) 1422
Mva1269I GAATGC 2 cut(s) 1249, 1445
MvaI CCWGG 1 cut(s) 526
MwoI GCNNNNNNNGC 2 cut(s) 371, 876
NciI CCSGG 1 cut(s) 1039
NcoI CCATGG 1 cut(s) 423
NdeII GATC 5 cut(s) 310, 610, 714, 1047, 1393
NlaIV GGNNCC 1 cut(s) 1037
NmuCI GTSAC 1 cut(s) 391
NsbI TGCGCA 1 cut(s) 109
NspI RCATGY 1 cut(s) 232
NspV TTCGAA 1 cut(s) 1281
OliI CACNNNNGTG 1 cut(s) 707
PaeR7I CTCGAG 1 cut(s) 579
PcsI WCGNNNNNNNCGW 1 cut(s) 1305
PctI GAATGC 2 cut(s) 1249, 1445
PdmI GAANNNNTTC 1 cut(s) 953
PfeI GAWTC 6 cut(s) 14, 130, 302, 1008, 1119, 1327
PflMI CCANNNNNTGG 2 cut(s) 184, 605
PfoI TCCNGGA 1 cut(s) 524
PkrI GCNGC 5 cut(s) 83, 156, 298, 318, 356
PpuMI RGGWCCY 1 cut(s) 522
Psp124BI GAGCTC 1 cut(s) 453
Psp5II RGGWCCY 1 cut(s) 522
Psp6I CCWGG 1 cut(s) 524
PspFI CCCAGC 1 cut(s) 1211
PspGI CCWGG 1 cut(s) 524
PspN4I GGNNCC 1 cut(s) 1037
PspPI GGNCC 2 cut(s) 522, 1035
PspPPI RGGWCCY 1 cut(s) 522
PspXI VCTCGAGB 1 cut(s) 579
PstI CTGCAG 1 cut(s) 318
PstNI CAGNNNCTG 3 cut(s) 184, 305, 1142
RsaI GTAC 3 cut(s) 577, 800, 810
RsaNI GTAC 3 cut(s) 576, 799, 809
RseI CAYNNNNRTG 3 cut(s) 471, 693, 707
SacI GAGCTC 1 cut(s) 453
SaqAI TTAA 5 cut(s) 222, 894, 1149, 1193, 1485
SatI GCNGC 5 cut(s) 82, 155, 297, 317, 355
Sau3AI GATC 5 cut(s) 310, 610, 714, 1047, 1393
Sau96I GGNCC 2 cut(s) 522, 1035
ScaI AGTACT 1 cut(s) 810
ScrFI CCNGG 2 cut(s) 526, 1039
SduI GDGCHC 3 cut(s) 117, 453, 1370
SfaNI GCATC 1 cut(s) 463
SfcI CTRYAG 1 cut(s) 314
Sfr274I CTCGAG 1 cut(s) 579
SfuI TTCGAA 1 cut(s) 1281
SinI GGWCC 1 cut(s) 522
SlaI CTCGAG 1 cut(s) 579
SmiMI CAYNNNNRTG 3 cut(s) 471, 693, 707
SmlI CTYRAG 5 cut(s) 116, 288, 579, 1331, 1523
SmoI CTYRAG 5 cut(s) 116, 288, 579, 1331, 1523
SsiI CCGC 2 cut(s) 157, 296
SspI AATATT 1 cut(s) 1458
SspMI CTAG 2 cut(s) 735, 1107
SstI GAGCTC 1 cut(s) 453
StyD4I CCNGG 2 cut(s) 524, 1037
StyI CCWWGG 1 cut(s) 423
TaaI ACNGT 3 cut(s) 822, 886, 977
TaiI ACGT 1 cut(s) 1373
TaqI TCGA 7 cut(s) 234, 471, 547, 580, 840, 846, 1281
TatI WGTACW 1 cut(s) 808
TauI GCSGC 1 cut(s) 299
TfiI GAWTC 6 cut(s) 14, 130, 302, 1008, 1119, 1327
Tru1I TTAA 5 cut(s) 222, 894, 1149, 1193, 1485
Tru9I TTAA 5 cut(s) 222, 894, 1149, 1193, 1485
TscAI CASTG 5 cut(s) 117, 597, 709, 1395, 1414
TseFI GTSAC 1 cut(s) 391
TseI GCWGC 4 cut(s) 81, 154, 316, 354
Tsp45I GTSAC 1 cut(s) 391
TspDTI ATGAA 8 cut(s) 455, 492, 918, 927, 962, 1193, 1243, 1340
TspGWI ACGGA 2 cut(s) 278, 452
TspRI CASTG 5 cut(s) 117, 597, 709, 1395, 1414
Van91I CCANNNNNTGG 2 cut(s) 184, 605
VpaK11BI GGWCC 1 cut(s) 522
XapI RAATTY 4 cut(s) 400, 440, 1092, 1160
XbaI TCTAGA 1 cut(s) 734
XceI RCATGY 1 cut(s) 232
XhoI CTCGAG 1 cut(s) 579
XmnI GAANNNNTTC 1 cut(s) 953
XspI CTAG 2 cut(s) 735, 1107
ZrmI AGTACT 1 cut(s) 810
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.