FvH4_5g16870

Glycosyltransferase-like domain-containing protein 2-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
9638675 .. 9639046
372 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g16870.t1

Sequence Viewer

Length: 372 bp
ATGGCAAGAGACTTGGGGTACAAGGTAACTGTGGAAGAGGCTGACAGGAATATATCAAAATTTGCAAATATTGTGAATTCTTGTGATGTGATGGTGGGAGTTCATGGAGCTGGCCTTCTGAACAATCTTTTCCTACCCGAAAACGCAATTTTCATCCAGATAGTTCCAGTTGGAAACTTCGAATGGATTTCGACCACATACTATGGAGGGCCAGCGAAGGATATGAATCTAAAGTATTTGGAATATAAGATAAGCAATGAAGAGAGCACACTGATACAGCAATATCCACTTGATCATGCAGTTTTTACTGACCCTGACTCAATTGGAAAACAAGGGTGGACGGCATTCAAGTCAATCTATCTGAACAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

124

Amino Acids

13.83

Weight (kDa)

5.02

Isoelectric Point (pI)

31.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 59, 76
AfaI GTAC 1 cut(s) 20
AgsI TTSAA 1 cut(s) 349
AluBI AGCT 1 cut(s) 110
AluI AGCT 1 cut(s) 110
Alw21I GWGCWC 1 cut(s) 269
Alw26I GTCTC 1 cut(s) 3
AoxI GGCC 2 cut(s) 112, 209
ApoI RAATTY 2 cut(s) 59, 76
AspS9I GGNCC 1 cut(s) 209
AsuII TTCGAA 1 cut(s) 180
Bbv12I GWGCWC 1 cut(s) 269
BccI CCATC 1 cut(s) 85
BceAI ACGGC 1 cut(s) 357
BclI TGATCA 1 cut(s) 292
BcoDI GTCTC 1 cut(s) 3
BmgT120I GGNCC 1 cut(s) 209
Bpu14I TTCGAA 1 cut(s) 180
BsaBI GATNNNNATC 1 cut(s) 225
Bse1I ACTGG 1 cut(s) 167
Bse3DI GCAATG 1 cut(s) 262
Bse8I GATNNNNATC 1 cut(s) 225
BseGI GGATG 1 cut(s) 153
BseJI GATNNNNATC 1 cut(s) 225
BseMI GCAATG 1 cut(s) 262
BseNI ACTGG 1 cut(s) 167
BshFI GGCC 2 cut(s) 114, 211
BsiHKAI GWGCWC 1 cut(s) 269
BsmAI GTCTC 1 cut(s) 3
BsmI GAATGC 1 cut(s) 344
BsnI GGCC 2 cut(s) 114, 211
Bsp119I TTCGAA 1 cut(s) 180
Bsp1286I GDGCHC 1 cut(s) 269
Bsp143I GATC 1 cut(s) 292
BspANI GGCC 2 cut(s) 114, 211
BspT104I TTCGAA 1 cut(s) 180
BsrDI GCAATG 1 cut(s) 262
BsrI ACTGG 1 cut(s) 167
BssMI GATC 1 cut(s) 292
Bst4CI ACNGT 1 cut(s) 31
Bst6I CTCTTC 2 cut(s) 30, 255
BstBI TTCGAA 1 cut(s) 180
BstC8I GCNNGC 2 cut(s) 112, 213
BstF5I GGATG 1 cut(s) 153
BstKTI GATC 1 cut(s) 295
BstMAI GTCTC 1 cut(s) 3
BstMBI GATC 1 cut(s) 292
BsuRI GGCC 2 cut(s) 114, 211
BtsCI GGATG 1 cut(s) 153
BtsIMutI CAGTG 1 cut(s) 269
Cac8I GCNNGC 2 cut(s) 112, 213
Cfr13I GGNCC 1 cut(s) 209
Csp6I GTAC 1 cut(s) 19
CviAII CATG 2 cut(s) 104, 296
CviJI RGCY 4 cut(s) 41, 110, 114, 211
CviKI_1 RGCY 4 cut(s) 41, 110, 114, 211
CviQI GTAC 1 cut(s) 19
DpnI GATC 1 cut(s) 294
DpnII GATC 1 cut(s) 292
Eam1104I CTCTTC 2 cut(s) 30, 255
EarI CTCTTC 2 cut(s) 30, 255
EcoRI GAATTC 1 cut(s) 76
FaeI CATG 2 cut(s) 107, 299
FaiI YATR 7 cut(s) 53, 105, 199, 204, 224, 246, 297
FatI CATG 2 cut(s) 103, 295
FbaI TGATCA 1 cut(s) 292
FokI GGATG 1 cut(s) 140
HaeIII GGCC 2 cut(s) 114, 211
Hin1II CATG 2 cut(s) 107, 299
HinfI GANTC 2 cut(s) 226, 317
Hpy166II GTNNAC 1 cut(s) 339
Hpy188I TCNGA 2 cut(s) 120, 363
Hpy188III TCNNGA 1 cut(s) 157
Hpy8I GTNNAC 1 cut(s) 339
HpyAV CCTTC 2 cut(s) 125, 211
HpyCH4III ACNGT 1 cut(s) 31
HpyCH4V TGCA 2 cut(s) 65, 299
Hsp92II CATG 2 cut(s) 107, 299
Ksp22I TGATCA 1 cut(s) 292
Kzo9I GATC 1 cut(s) 292
LmnI GCTCC 1 cut(s) 107
LpnPI CCDG 6 cut(s) 31, 96, 170, 180, 225, 327
MaeIII GTNAC 1 cut(s) 25
MalI GATC 1 cut(s) 294
MboI GATC 1 cut(s) 292
MboII GAAGA 2 cut(s) 47, 272
MfeI CAATTG 1 cut(s) 321
MhlI GDGCHC 1 cut(s) 269
MluCI AATT 4 cut(s) 59, 76, 147, 321
MlyI GAGTC 1 cut(s) 311
MmeI TCCRAC 1 cut(s) 151
MnlI CCTC 2 cut(s) 31, 200
MunI CAATTG 1 cut(s) 321
Mva1269I GAATGC 1 cut(s) 344
NdeII GATC 1 cut(s) 292
NlaIII CATG 2 cut(s) 107, 299
NspV TTCGAA 1 cut(s) 180
PctI GAATGC 1 cut(s) 344
PfeI GAWTC 1 cut(s) 226
PleI GAGTC 1 cut(s) 311
PpsI GAGTC 1 cut(s) 311
PspPI GGNCC 1 cut(s) 209
RsaI GTAC 1 cut(s) 20
RsaNI GTAC 1 cut(s) 19
Sau3AI GATC 1 cut(s) 292
Sau96I GGNCC 1 cut(s) 209
SchI GAGTC 1 cut(s) 311
SduI GDGCHC 1 cut(s) 269
SetI ASST 2 cut(s) 27, 112
SfuI TTCGAA 1 cut(s) 180
Sse9I AATT 4 cut(s) 59, 76, 147, 321
SspI AATATT 1 cut(s) 70
TaaI ACNGT 1 cut(s) 31
TaqI TCGA 2 cut(s) 180, 191
TasI AATT 4 cut(s) 59, 76, 147, 321
TfiI GAWTC 1 cut(s) 226
TscAI CASTG 1 cut(s) 276
TspDTI ATGAA 4 cut(s) 92, 142, 239, 273
TspRI CASTG 1 cut(s) 276
XapI RAATTY 2 cut(s) 59, 76
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.