Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000529

Physical Location & Seq

Genomic Coordinates Forward (+)

8332797 .. 8336235

Gene Structure 3439 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G23300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGAGGGGGAGATCAGAAGGAGGGAAGAAAAAGCCGGTGATTGTGTTACTCTGCGTTGCATCAGTAGTGCTTGTTTTTGTATATCTCTTCTTTGGTTCCTCTAACCATAAAGCTATTGAGTATGGGAGGAAACTTGGTTTGGGTGGTGATGATGATGATAGTACTAAGAAAGATGACACTTCTAGCTCTTTTTATGTAGAAGATGTAGTAGGGAATGGTTTCACTCCCAGAAGCTTTCCTGTGTGTGATGATCGACACTCGGAGCTTATTCCTTGCTTAGATAGGAATCTTATATACCAAATGAGATTGAAGCTTGATTTGTCTTTGATGGAGCATTATGAACGTCACTGTCCTCCTCCTGAAAGGAGGTTTAATTGCTTGATTCCTCCTCCTCCAGGGTATAAGATTCCAATCAAGTGGCCGAAAAGCAGAGACGAAGTTTGGAAAGTGAACATTCCTCATACTCACTTAGCGCATGAGAAGTCTGACCAAAACTGGATGGTTGTTAAAGGAGAGAAAATCAATTTCCCTGGTGGAGGCACACATTTTCATTATGGTGCTGATAAGTATATTGCATCAATGGCAAATATGCTTAATTTTCCGAACAATGTTTTGAACAATGGGGGAAGGCTGAGGACATTTCTTGATGTTGGCTGTGGTGTTGCTAGCTTTGGAGGTTATCTTCTTGCATCAGAAATTATGACGATGTCTTTGGCACCTAATGATGTTCATCAGAACCAAATCCAATTTGCTCTTGAGAGAGGGATTCCTGCATACCTCGGCGTTCTAGGGACCAAGAGGCTCCCATACCCAAGCAGATCCTTTGAACTTGCTCACTGTTCACGTTGTCGTATCGATTGGCTTCAAAGAGATGGTATTCTTCTTCTCGAGCTAGACAGGGTGCTAAGACCTGGTGGCTATTTTGCATATTCATCTCCAGAAGCATATGCACAAGATGAAGAGGACCTCAGAATATGGAGAGAAATGAGTGCTCTTGTGGGCCGTATGTGTTGGACGATAGCTGCAAAAAGGAATCAAACTGTAATTTGGCAAAAACCTTTGACAAATGATTGTTATTTGGGAAGAGAACCTGGAACCCAGCCTCCTCTTTGCAATTCTGACAGTGACCCTGATGCTGTGTATGGTGTAAACATGGAAGCATGCATTACTCAATACAGTGACCATGACCACAAAACCAAGGGAAGTGGATTGGCTCCATGGCCAGCTCGATTAACCTCTCCTCCTCCTCGGCTAGCTGACTTTGGCTATTCCACTGACATTTTTGAGAAGGATACAGAAACTTGGAGGCAGAGAGTAGATACTTATTGGGATCTCTTGAGTCCTAAAATTCAATCAGACACTGTAAGGAACATAATGGACATGAAAGCAAGCATGGGTTCCTTTGCTGCTGCTCTGAAAGAAAAAGATGTTTGGGTTATGAATGTTGTTCCTGAAGACGGACCAAACACGCTTAAACTAATATACGACAGAGGCCTGATGGGTGCTGTTCATAGCTGGTGTGAAGCGTTCTCGACTTACCCGAGGACTTACGATTTACTCCATGCCTGGGACATCATATCTGATATCAAGAAGAGAGGTTGCAGCGCAGAAGATTTGCTGTTGGAGATGGATCGTATACTTCGTCCAAGCGGTTTCATACTCATAAGGGACAAACAATCCGTAGTCGACCTTGTGAAGAAGTATCTCAAGGCTTTGCATTGGGAAGCAGTTGAAACCAAGACAGCCTCGGAATCAGACCAAGACTCGGACAATGTGATACTCATTGTCCAGAAGAAACTGTGGTTGACAAGTGAAAGCCTCAGAGATTTGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005773 GO:0005774 GO:0005794 GO:0005802 GO:0005911 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0009506 GO:0012505 GO:0016020 GO:0016740 GO:0016741 GO:0030054 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0097708 GO:0098588 GO:0098791 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

611

Amino Acids

69.36

Weight (kDa)

6.27

Isoelectric Point (pI)

39.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	88 - 598	1.8e-228	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	215 - 309	3.6e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000529)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04430 AT1G04430 AT1G04430 AT3G23300 AT3G23300 AT4G14360 AT4G14360
fragaria_vesca	FvH4_2g21260 FvH4_2g21260 FvH4_2g21260 FvH4_4g03770 FvH4_4g03770 FvH4_4g03770 FvH4_4g03770 FvH4_4g03770 FvH4_4g03770
malus_domestica	MD05G1195000.v1.1 MD10G1181600.v1.1 MD10G1182100.v1.1 MD13G1215000.v1.1
prunus_persica	Prupe.1G040400_v2.0.a1 Prupe.1G040400_v2.0.a1 Prupe.1G040400_v2.0.a1 Prupe.1G040400_v2.0.a1 Prupe.8G221700_v2.0.a1 Prupe.8G221700_v2.0.a1 Prupe.8G221700_v2.0.a1
pyrus_communis	pycom05g18230 pycom10g15760 pycom10g15770 pycom111g01800
rosa_chinensis	RchiOBHm_Chr4g0393501 RchiOBHm_Chr4g0393511 RchiOBHm_Chr4g0393631 RchiOBHm_Chr6g0287841
rosa_laevigata	RLG00000009742 RLG00000012463
rosa_multiflora	Rmu_sc0001531.1_g000028 Rmu_sc0003877.1_g000004 Rmu_sc0007724.1_g000003 Rmu_sc0008931.1_g000001 Rmu_sc0015036.1_g000004 Rmu_sc0021463.1_g000002 Rmu_sc0023299.1_g000001 Rmu_sc0023300.1_g000001 Rmu_sc0036005.1_g000001
rosa_roxburghii	Rroxscaffold_5G00338440 Rroxscaffold_5G00338470 Rroxscaffold_5G00338730 Rroxscaffold_5G00338790 Rroxscaffold_7G00180730 Rroxscaffold_7G00180820
rosa_rugosa	Rorug03G0372400 Rorug03G0372500 Rorug03G0372600 Rorug04G0000100 Rorug04G0000200 Rorug04G0000300 Rorug04G0000400 Rorug04G0000500 Rorug04G0000600.1 Rorug04G0000700 Rorug04G0000800 Rorug04G0000900 Rorug06G0192300 Rorug06G0192400 Rorug06G0192500
rosa_samantha	Rh4AG047800 Rh4AG048100 Rh4BG043700 Rh4BG044600 Rh4CG050500 Rh4CG050600 Rh4CG050700 Rh4CG051400 Rh4DG045000 Rh4DG045300 Rh6AG302000 Rh6BG307900 Rh6CG301600 Rh6CG315800 Rh6DG300500
rosa_wichuraiana	Rw4G003770 Rw4G003800 Rw6G026090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	715
AccI	GTMKAC	2 cut(s)	1636, 1686
AciI	CCGC	1 cut(s)	1650
AclWI	GGATC	3 cut(s)	813, 1338, 1638
AcoI	YGGCCR	2 cut(s)	419, 1220
AcsI	RAATTY	1 cut(s)	1347
AcuI	CTGAAG	1 cut(s)	1473
AfaI	GTAC	1 cut(s)	163
AfiI	CCNNNNNNNGG	5 cut(s)	395, 536, 1457, 1567, 1765
AgsI	TTSAA	6 cut(s)	310, 616, 827, 866, 1352, 1733
AjnI	CCWGG	5 cut(s)	394, 529, 910, 1090, 1565
AjuI	GAANNNNNNNTTGG	2 cut(s)	122, 154
AloI	GAACNNNNNNTCC	2 cut(s)	1087, 1119
Alw21I	GWGCWC	1 cut(s)	994
Alw26I	GTCTC	1 cut(s)	426
AlwI	GGATC	3 cut(s)	813, 1338, 1638
AlwNI	CAGNNNCTG	1 cut(s)	1361
Ama87I	CYCGRG	2 cut(s)	887, 1540
AoxI	GGCC	4 cut(s)	419, 1000, 1220, 1492
ApeKI	GCWGC	4 cut(s)	1022, 1406, 1409, 1602
ApoI	RAATTY	1 cut(s)	1347
ArsI	GACNNNNNNTTYG	2 cut(s)	694, 726
Asp700I	GAANNNNTTC	1 cut(s)	218
AspLEI	GCGC	2 cut(s)	475, 1607
AspS9I	GGNCC	4 cut(s)	792, 964, 1000, 1460
AsuHPI	GGTGA	2 cut(s)	49, 158
AsuNHI	GCTAGC	2 cut(s)	665, 1252
AvaI	CYCGRG	2 cut(s)	887, 1540
AvaII	GGWCC	3 cut(s)	792, 964, 1460
BalI	TGGCCA	1 cut(s)	1222
BanI	GGYRCC	1 cut(s)	715
BbsI	GAAGAC	1 cut(s)	1461
Bbv12I	GWGCWC	1 cut(s)	994
BbvCI	CCTCAGC	1 cut(s)	632
BbvI	GCAGC	4 cut(s)	1009, 1393, 1396, 1614
BccI	CCATC	5 cut(s)	322, 493, 866, 1492, 1621
BceAI	ACGGC	1 cut(s)	987
BciT130I	CCWGG	5 cut(s)	396, 531, 912, 1092, 1567
BciVI	GTATCC	1 cut(s)	1285
BcoDI	GTCTC	1 cut(s)	426
BfaI	CTAG	5 cut(s)	183, 666, 788, 893, 1253
BfuI	GTATCC	1 cut(s)	1285
BisI	GCNGC	4 cut(s)	1023, 1407, 1410, 1603
BlsI	GCNGC	4 cut(s)	1024, 1408, 1411, 1604
BmcAI	AGTACT	1 cut(s)	163
Bme1390I	CCNGG	5 cut(s)	396, 531, 912, 1092, 1567
Bme18I	GGWCC	3 cut(s)	792, 964, 1460
BmeT110I	CYCGRG	2 cut(s)	887, 1540
BmgT120I	GGNCC	4 cut(s)	792, 964, 1000, 1460
BmiI	GGNNCC	7 cut(s)	97, 717, 793, 803, 1096, 1215, 1399
BmrFI	CCNGG	5 cut(s)	396, 531, 912, 1092, 1567
BmsI	GCATC	4 cut(s)	68, 584, 698, 1123
BmtI	GCTAGC	2 cut(s)	669, 1256
BpiI	GAAGAC	1 cut(s)	1461
BpmI	CTGGAG	2 cut(s)	378, 921
Bpu10I	CCTNAGC	1 cut(s)	632
BpuEI	CTTGAG	3 cut(s)	776, 1357, 1691
Bsa29I	ATCGAT	1 cut(s)	855
BsaBI	GATNNNNATC	3 cut(s)	285, 410, 729
BsaJI	CCNNGG	9 cut(s)	395, 529, 778, 1197, 1217, 1247, 1541, 1566, 1746
BsaXI	ACNNNNNCTCC	4 cut(s)	1087, 1117, 1225, 1255
Bsc4I	CCNNNNNNNGG	5 cut(s)	395, 536, 1457, 1567, 1765
Bse118I	RCCGGY	1 cut(s)	34
Bse1I	ACTGG	1 cut(s)	500
Bse8I	GATNNNNATC	3 cut(s)	285, 410, 729
BseBI	CCWGG	5 cut(s)	396, 531, 912, 1092, 1567
BseCI	ATCGAT	1 cut(s)	855
BseDI	CCNNGG	9 cut(s)	395, 529, 778, 1197, 1217, 1247, 1541, 1566, 1746
BseGI	GGATG	1 cut(s)	504
BseJI	GATNNNNATC	3 cut(s)	285, 410, 729
BseLI	CCNNNNNNNGG	5 cut(s)	395, 536, 1457, 1567, 1765
BseMII	CTCAG	3 cut(s)	623, 982, 1834
BseNI	ACTGG	1 cut(s)	500
BseRI	GAGGAG	7 cut(s)	345, 378, 381, 1095, 1230, 1233, 1236
BseXI	GCAGC	4 cut(s)	1009, 1393, 1396, 1614
BseYI	CCCAGC	1 cut(s)	1098
BshFI	GGCC	4 cut(s)	421, 1002, 1222, 1494
BshNI	GGYRCC	1 cut(s)	715
BshVI	ATCGAT	1 cut(s)	855
BsiHKAI	GWGCWC	1 cut(s)	994
BsiHKCI	CYCGRG	2 cut(s)	887, 1540
BsiSI	CCGG	1 cut(s)	35
BslFI	GGGAC	3 cut(s)	805, 1583, 1682
BslI	CCNNNNNNNGG	5 cut(s)	395, 536, 1457, 1567, 1765
BsmAI	GTCTC	1 cut(s)	426
BsmBI	CGTCTC	1 cut(s)	426
BsmFI	GGGAC	3 cut(s)	805, 1583, 1682
BsnI	GGCC	4 cut(s)	421, 1002, 1222, 1494
BsoBI	CYCGRG	2 cut(s)	887, 1540
Bsp1286I	GDGCHC	1 cut(s)	994
Bsp143I	GATC	5 cut(s)	11, 250, 818, 1330, 1630
Bsp19I	CCATGG	1 cut(s)	1217
BspACI	CCGC	1 cut(s)	1650
BspANI	GGCC	4 cut(s)	421, 1002, 1222, 1494
BspCNI	CTCAG	3 cut(s)	624, 981, 1833
BspDI	ATCGAT	1 cut(s)	855
BspLI	GGNNCC	7 cut(s)	97, 717, 793, 803, 1096, 1215, 1399
BspOI	GCTAGC	2 cut(s)	669, 1256
BspPI	GGATC	3 cut(s)	813, 1338, 1638
BspT107I	GGYRCC	1 cut(s)	715
BsrFI	RCCGGY	1 cut(s)	34
BsrI	ACTGG	1 cut(s)	500
BssAI	RCCGGY	1 cut(s)	34
BssECI	CCNNGG	9 cut(s)	395, 529, 778, 1197, 1217, 1247, 1541, 1566, 1746
BssMI	GATC	5 cut(s)	11, 250, 818, 1330, 1630
BssNAI	GTATAC	1 cut(s)	1637
BssT1I	CCWWGG	2 cut(s)	1197, 1217
Bst1107I	GTATAC	1 cut(s)	1637
Bst2UI	CCWGG	5 cut(s)	396, 531, 912, 1092, 1567
Bst4CI	ACNGT	7 cut(s)	350, 839, 1042, 1124, 1178, 1363, 1800
Bst6I	CTCTTC	4 cut(s)	92, 954, 1078, 1586
BstC8I	GCNNGC	5 cut(s)	667, 1162, 1224, 1254, 1390
BstDEI	CTNAG	7 cut(s)	165, 277, 469, 632, 905, 968, 1820
BstDSI	CCRYGG	1 cut(s)	1217
BstENI	CCTNNNNNAGG	2 cut(s)	393, 534
BstF5I	GGATG	1 cut(s)	504
BstHHI	GCGC	2 cut(s)	475, 1607
BstKTI	GATC	5 cut(s)	14, 253, 821, 1333, 1633
BstMAI	GTCTC	1 cut(s)	426
BstMBI	GATC	5 cut(s)	11, 250, 818, 1330, 1630
BstMWI	GCNNNNNNNGC	1 cut(s)	581
BstNI	CCWGG	5 cut(s)	396, 531, 912, 1092, 1567
BstNSI	RCATGY	1 cut(s)	1164
BstSCI	CCNGG	5 cut(s)	394, 529, 910, 1090, 1565
BstV1I	GCAGC	4 cut(s)	1009, 1393, 1396, 1614
BstV2I	GAAGAC	1 cut(s)	1461
BstX2I	RGATCY	2 cut(s)	818, 1330
BstXI	CCANNNNNNTGG	1 cut(s)	417
BstYI	RGATCY	2 cut(s)	818, 1330
BstZ17I	GTATAC	1 cut(s)	1637
Bsu15I	ATCGAT	1 cut(s)	855
BsuI	GTATCC	1 cut(s)	1285
BsuRI	GGCC	4 cut(s)	421, 1002, 1222, 1494
BsuTUI	ATCGAT	1 cut(s)	855
BtgI	CCRYGG	1 cut(s)	1217
BtsCI	GGATG	1 cut(s)	504
BtsIMutI	CAGTG	6 cut(s)	346, 835, 1129, 1183, 1272, 1359
Cac8I	GCNNGC	5 cut(s)	667, 1162, 1224, 1254, 1390
CaiI	CAGNNNCTG	1 cut(s)	1361
CfoI	GCGC	2 cut(s)	475, 1607
Cfr10I	RCCGGY	1 cut(s)	34
Cfr13I	GGNCC	4 cut(s)	792, 964, 1000, 1460
ClaI	ATCGAT	1 cut(s)	855
CsiI	ACCWGGT	1 cut(s)	910
Csp6I	GTAC	1 cut(s)	162
CspCI	CAANNNNNGTGG	2 cut(s)	1186, 1221
CviAII	CATG	8 cut(s)	476, 1153, 1161, 1184, 1218, 1381, 1393, 1562
CviQI	GTAC	1 cut(s)	162
DdeI	CTNAG	7 cut(s)	165, 277, 469, 632, 905, 968, 1820
DpnI	GATC	5 cut(s)	13, 252, 820, 1332, 1632
DpnII	GATC	5 cut(s)	11, 250, 818, 1330, 1630
EaeI	YGGCCR	2 cut(s)	419, 1220
Eam1104I	CTCTTC	4 cut(s)	92, 954, 1078, 1586
EarI	CTCTTC	4 cut(s)	92, 954, 1078, 1586
Eco130I	CCWWGG	2 cut(s)	1197, 1217
Eco147I	AGGCCT	1 cut(s)	1494
Eco32I	GATATC	1 cut(s)	1585
Eco47I	GGWCC	3 cut(s)	792, 964, 1460
Eco57I	CTGAAG	1 cut(s)	1473
Eco88I	CYCGRG	2 cut(s)	887, 1540
EcoNI	CCTNNNNNAGG	2 cut(s)	393, 534
EcoO109I	RGGNCCY	1 cut(s)	964
EcoRII	CCWGG	5 cut(s)	394, 529, 910, 1090, 1565
EcoRV	GATATC	1 cut(s)	1585
EcoT14I	CCWWGG	2 cut(s)	1197, 1217
EcoT22I	ATGCAT	1 cut(s)	1166
ErhI	CCWWGG	2 cut(s)	1197, 1217
Esp3I	CGTCTC	1 cut(s)	426
FaeI	CATG	8 cut(s)	479, 1156, 1164, 1187, 1221, 1384, 1396, 1565
FaqI	GGGAC	3 cut(s)	805, 1583, 1682
FatI	CATG	8 cut(s)	475, 1152, 1160, 1183, 1217, 1380, 1392, 1561
FauNDI	CATATG	1 cut(s)	946
FblI	GTMKAC	2 cut(s)	1636, 1686
Fnu4HI	GCNGC	4 cut(s)	1023, 1407, 1410, 1603
FokI	GGATG	1 cut(s)	511
Fsp4HI	GCNGC	4 cut(s)	1023, 1407, 1410, 1603
FspBI	CTAG	5 cut(s)	183, 666, 788, 893, 1253
GlaI	GCGC	2 cut(s)	474, 1606
GluI	GCNGC	4 cut(s)	1023, 1407, 1410, 1603
GsaI	CCCAGC	1 cut(s)	1102
GsuI	CTGGAG	2 cut(s)	378, 921
HaeIII	GGCC	4 cut(s)	421, 1002, 1222, 1494
HapII	CCGG	1 cut(s)	35
HhaI	GCGC	2 cut(s)	475, 1607
Hin1II	CATG	8 cut(s)	479, 1156, 1164, 1187, 1221, 1384, 1396, 1565
Hin6I	GCGC	2 cut(s)	473, 1605
HinP1I	GCGC	2 cut(s)	473, 1605
HincII	GTYRAC	2 cut(s)	1687, 1806
HindII	GTYRAC	2 cut(s)	1687, 1806
HindIII	AAGCTT	2 cut(s)	232, 311
HinfI	GANTC	8 cut(s)	286, 382, 406, 766, 1033, 1339, 1751, 1763
HpaII	CCGG	1 cut(s)	35
HphI	GGTGA	2 cut(s)	49, 158
Hpy166II	GTNNAC	6 cut(s)	451, 842, 1150, 1637, 1687, 1806
Hpy8I	GTNNAC	6 cut(s)	451, 842, 1150, 1637, 1687, 1806
HpyAV	CCTTC	3 cut(s)	11, 621, 1282
HpyCH4III	ACNGT	7 cut(s)	350, 839, 1042, 1124, 1178, 1363, 1800
HpyCH4IV	ACGT	2 cut(s)	343, 844
HpyF10VI	GCNNNNNNNGC	1 cut(s)	581
HpyF3I	CTNAG	7 cut(s)	165, 277, 469, 632, 905, 968, 1820
HpySE526I	ACGT	2 cut(s)	343, 844
Hsp92II	CATG	8 cut(s)	479, 1156, 1164, 1187, 1221, 1384, 1396, 1565
HspAI	GCGC	2 cut(s)	473, 1605
Kzo9I	GATC	5 cut(s)	11, 250, 818, 1330, 1630
LmnI	GCTCC	4 cut(s)	262, 331, 807, 1219
Lsp1109I	GCAGC	4 cut(s)	1009, 1393, 1396, 1614
LweI	GCATC	4 cut(s)	68, 584, 698, 1123
MabI	ACCWGGT	1 cut(s)	910
MaeI	CTAG	5 cut(s)	183, 666, 788, 893, 1253
MaeII	ACGT	2 cut(s)	343, 844
MaeIII	GTNAC	4 cut(s)	45, 344, 1124, 1178
MalI	GATC	5 cut(s)	13, 252, 820, 1332, 1632
MboI	GATC	5 cut(s)	11, 250, 818, 1330, 1630
MflI	RGATCY	2 cut(s)	818, 1330
MhlI	GDGCHC	1 cut(s)	994
MlsI	TGGCCA	1 cut(s)	1222
MluCI	AATT	8 cut(s)	373, 523, 595, 696, 746, 1044, 1114, 1347
MluNI	TGGCCA	1 cut(s)	1222
MlyI	GAGTC	2 cut(s)	1348, 1757
MmeI	TCCRAC	2 cut(s)	992, 1602
Mox20I	TGGCCA	1 cut(s)	1222
Mph1103I	ATGCAT	1 cut(s)	1166
MroXI	GAANNNNTTC	1 cut(s)	218
MscI	TGGCCA	1 cut(s)	1222
MseI	TTAA	5 cut(s)	372, 507, 594, 1232, 1473
MslI	CAYNNNNRTG	1 cut(s)	555
Msp20I	TGGCCA	1 cut(s)	1222
MspI	CCGG	1 cut(s)	35
MspR9I	CCNGG	5 cut(s)	396, 531, 912, 1092, 1567
MvaI	CCWGG	5 cut(s)	396, 531, 912, 1092, 1567
MwoI	GCNNNNNNNGC	1 cut(s)	581
NcoI	CCATGG	1 cut(s)	1217
NdeI	CATATG	1 cut(s)	946
NdeII	GATC	5 cut(s)	11, 250, 818, 1330, 1630
NheI	GCTAGC	2 cut(s)	665, 1252
NlaIII	CATG	8 cut(s)	479, 1156, 1164, 1187, 1221, 1384, 1396, 1565
NlaIV	GGNNCC	7 cut(s)	97, 717, 793, 803, 1096, 1215, 1399
NmeAIII	GCCGAG	2 cut(s)	759, 1228
NmuCI	GTSAC	3 cut(s)	344, 1124, 1178
NsiI	ATGCAT	1 cut(s)	1166
NspI	RCATGY	1 cut(s)	1164
PaeI	GCATGC	1 cut(s)	1164
PaeR7I	CTCGAG	1 cut(s)	887
PceI	AGGCCT	1 cut(s)	1494
PcsI	WCGNNNNNNNCGW	2 cut(s)	1538, 1639
PdmI	GAANNNNTTC	1 cut(s)	218
PfeI	GAWTC	6 cut(s)	286, 382, 406, 766, 1033, 1751
PflFI	GACNNNGTC	1 cut(s)	706
PkrI	GCNGC	4 cut(s)	1024, 1408, 1411, 1604
PleI	GAGTC	2 cut(s)	1347, 1757
PpsI	GAGTC	2 cut(s)	1347, 1757
PpuMI	RGGWCCY	1 cut(s)	964
Psp5II	RGGWCCY	1 cut(s)	964
Psp6I	CCWGG	5 cut(s)	394, 529, 910, 1090, 1565
PspFI	CCCAGC	1 cut(s)	1098
PspGI	CCWGG	5 cut(s)	394, 529, 910, 1090, 1565
PspN4I	GGNNCC	7 cut(s)	97, 717, 793, 803, 1096, 1215, 1399
PspPI	GGNCC	4 cut(s)	792, 964, 1000, 1460
PspPPI	RGGWCCY	1 cut(s)	964
PstNI	CAGNNNCTG	1 cut(s)	1361
PsuI	RGATCY	2 cut(s)	818, 1330
PsyI	GACNNNGTC	1 cut(s)	706
RsaI	GTAC	1 cut(s)	163
RsaNI	GTAC	1 cut(s)	162
RseI	CAYNNNNRTG	1 cut(s)	555
SalI	GTCGAC	1 cut(s)	1685
SaqAI	TTAA	5 cut(s)	372, 507, 594, 1232, 1473
SatI	GCNGC	4 cut(s)	1023, 1407, 1410, 1603
Sau3AI	GATC	5 cut(s)	11, 250, 818, 1330, 1630
Sau96I	GGNCC	4 cut(s)	792, 964, 1000, 1460
ScaI	AGTACT	1 cut(s)	163
SchI	GAGTC	2 cut(s)	1348, 1757
ScrFI	CCNGG	5 cut(s)	396, 531, 912, 1092, 1567
SduI	GDGCHC	1 cut(s)	994
SexAI	ACCWGGT	1 cut(s)	910
SfaNI	GCATC	4 cut(s)	68, 584, 698, 1123
Sfr274I	CTCGAG	1 cut(s)	887
SinI	GGWCC	3 cut(s)	792, 964, 1460
SlaI	CTCGAG	1 cut(s)	887
SmiMI	CAYNNNNRTG	1 cut(s)	555
SmlI	CTYRAG	4 cut(s)	755, 887, 1336, 1706
SmoI	CTYRAG	4 cut(s)	755, 887, 1336, 1706
SphI	GCATGC	1 cut(s)	1164
Sse9I	AATT	8 cut(s)	373, 523, 595, 696, 746, 1044, 1114, 1347
SseBI	AGGCCT	1 cut(s)	1494
SsiI	CCGC	1 cut(s)	1650
SspMI	CTAG	5 cut(s)	183, 666, 788, 893, 1253
StuI	AGGCCT	1 cut(s)	1494
StyD4I	CCNGG	5 cut(s)	394, 529, 910, 1090, 1565
StyI	CCWWGG	2 cut(s)	1197, 1217
TaaI	ACNGT	7 cut(s)	350, 839, 1042, 1124, 1178, 1363, 1800
TaiI	ACGT	2 cut(s)	346, 847
TaqI	TCGA	6 cut(s)	253, 855, 888, 1228, 1532, 1686
TasI	AATT	8 cut(s)	373, 523, 595, 696, 746, 1044, 1114, 1347
TatI	WGTACW	1 cut(s)	161
TfiI	GAWTC	6 cut(s)	286, 382, 406, 766, 1033, 1751
Tru1I	TTAA	5 cut(s)	372, 507, 594, 1232, 1473
Tru9I	TTAA	5 cut(s)	372, 507, 594, 1232, 1473
TscAI	CASTG	6 cut(s)	353, 842, 1129, 1183, 1279, 1366
TseFI	GTSAC	3 cut(s)	344, 1124, 1178
TseI	GCWGC	4 cut(s)	1022, 1406, 1409, 1602
Tsp45I	GTSAC	3 cut(s)	344, 1124, 1178
TspDTI	ATGAA	9 cut(s)	354, 539, 719, 921, 972, 1397, 1454, 1499, 1645
TspGWI	ACGGA	2 cut(s)	1473, 1669
TspRI	CASTG	6 cut(s)	353, 842, 1129, 1183, 1279, 1366
Tth111I	GACNNNGTC	1 cut(s)	706
VpaK11BI	GGWCC	3 cut(s)	792, 964, 1460
XagI	CCTNNNNNAGG	2 cut(s)	393, 534
XapI	RAATTY	1 cut(s)	1347
XceI	RCATGY	1 cut(s)	1164
XhoI	CTCGAG	1 cut(s)	887
XmiI	GTMKAC	2 cut(s)	1636, 1686
XmnI	GAANNNNTTC	1 cut(s)	218
XspI	CTAG	5 cut(s)	183, 666, 788, 893, 1253
ZrmI	AGTACT	1 cut(s)	163
Zsp2I	ATGCAT	1 cut(s)	1166

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.