Rorug04G0000700

Putative S-adenosyl-L-methionine-dependent methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000529
Physical Location & Seq
Reverse (-)
140878 .. 158117
17240 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0000700.1

Sequence Viewer

Length: 3033 bp
ATGGCGCTATCGGCGTCTGACCTACCGGCCATGTTCTCGTTGCTGAGTAACTCATTGAGTGGTGATGAGAGTGTCCGGAAACCGGCAGAGGCGGCGCTCTCCCAGTCGGAGGCGAGGCCTGGTTTCTGCTCTTGTCTAATGGAAGTCATAACAGCCAAGGATTTGGCACCTCATGTAGATGTTCGCTTGATGGCTTCAGTGTATTTCAAAAATAGTATTAATCGTTACTGGAGGCACAGGCGTGATTCCTCGGGAATTAGCAACGAGGAGAAACTATATCTCAGACAAAAACTCTTATCACACTTCGGGGAAGAGAACTATCAGATAGCGCAAATGTTGGCTGTGCTTGTTTCCAAAATTGCTCGTATAGATTACCCGAGAGAATGGCCTGAGCTCTTTTCTGTTTTAGCACAGAAGCTTCAATCAGCAGATATTCTTTCTTCGCACAGAATTTTTTTGACCCTCTTTCGAACCTTGAAGGAGTTGTCCACCAAGCGTCTCATCTCAGACCAAAAGAACTTTGCAGAGATATCAGCTCGCTTCTTTGATTATAGCTGGCACCTTTGGCAGACAGATGTGCAAACGTTGTTACATGGTTTTTCTACATTGACTCAAAGCTACAACTCAAATACATTGGAGCAACATCACGATGATCTTTATCTAACATGTGAGCGATGGCTGTTGTGCCTAAAGATAATACGCCAATTAATAGTTTCAGGGTTTCCAAGTGACGCAAAATGCGTACAGGAGGTCCGACCAGTCATGGAGGTCTCGCCCATGCTCTTGAATGCCATTCAGTCATTTCTCCCATACTATTCATCTTTTCAGAAAGGACATCCTAAATTTTTGGACTTCCTAAAGAGGGCTTGTACTAAACTGATGAAGGTTTTAATTGCACTTCAGGGCAGGCATCCTTATTCATTTAGTGATAAATGCGTCCTTCCGACTGTAGTTGATTTCTGTTTACAGAAGATAACAGATCCTGATCCAGATGTATTATCCTTTGAGCAGTTTCTGATTCAATGTATGGTAATGATTAAATCTATATTAGAATGTAAAGAGTACAAGCCAAGTCTCACTGGTCGGGTGATGGATGAAAATGGGGTTACACTGGAGCAAATGAAGAAAAATATATCTGGTGCTGTCAGTGGCATCTTGACTTCCCTCATGACAAGTGAACGCATTATAGTCTTGTGTAATACACTGATAAGAAGGTATTTTGTTCTAACAACAAGTGATTTGGAAGAGTGGTACCAGAATCCTGAATCTTTTCATCATGAGCAGGATATGGTTCAGTGGACAGAAAAATTAAGGCCATGTGCTGAAGCTTTATACATTGTTCTTTTTGAAAACCACAGCCAGCTCCTAGGGCCTGTTGTGGTTTCCATCCTTCAAGAGGCAATGAATGGCTGCCCATCTTCAGTGACTGAAATCACTCCAGGGTTGCTTCTTAAAGATGCTGCTTATGGTGCTGCTGCATATGTTTATTACGAACTCTCAAATTACCTGAGCTTTAAAGATTGGTTTAATGGTGCATTATCCCTTGAACTCTCAAATGATCATCCAAATATGCGTATCATCCACCGGAAAGTTGCACTAATTTTGGGTCAATGGGTTTCTGAGATTAAAGAGGACACAAAGAGGCCAGTTTACTGTGCTTTAATCCGATTACTACAGGACAAAGACCTATCTGTTAGGTTGGCAGCCTGTAGGTCTCTGTGTTCGCATATTGAAGATGCTAGCTTTTCAGAAGGAGAATTCGTTGATCTTCTCCCTATATGTTGGGATTCAAGTTTTAGGTTGATTGAGGAAGTTCAGGAGTTTGACTCGAAGGTTCAGGTTTTGAATTTGATTTCTGTTCTCATTGGACATGTGACTGAAGTTATTCCGTTCGCAAACAAGCTTGTTCTATTTTTTCAGAAGGTTTGGGAGGAATCTTCTGGTGAATGCCTTCTGCAGATTCAACTTCTCGTTGCATTGAAGAACTTTGTGGTCGCACTTGGTTACCAATCACCTCTTTGCTACAACATATTGCTGCCCGTTCTGCAAAAGGGAATCGATATAAATAGCCCTGATGAACTCAATCTTCTAGAGGATAGCATGCTGTTATGGGAAGCCACACTTTCTCAAGCCCCTTCAATGGTGCCTCAACTACTAGCATACTTCCCTTGTTTAGTTGAGATTCTGGAAAGAAGTTTTGATCACTTGCAGGTTGCTGTCACTATAATTGAAGATTACATTATCTTAGGTGGATCGGAATTTCTGAGTATGCATGCATCAAGTGTGGCTAAAATACTAGATCTGGTTGTTGGGAATGTCAATGATAGGGGACTTCTGTCAACTCTCCCTGTCATTGATATTCTAATACAGTGTTTCCCTACAGAAGTACCACAGTTGATCAGCAGTGCATTACAAAAATTAATTGTTATATGCATAACTGGAGCTGATGACCGAGATCCTTCTAAGGCCACTGTTAAAGCATCTTCGGCTGCCATCTTGGCAAGAATATTGGTTATGAATACCAATTACCTAGCACACTTGACGTCCGAGCCATCACTTTTGTTGCTCCTTCAAAAGTCGGGTGTCCCAATTGAGGAAAATATACTTCTTTCTCTCGTTGACATATGGCTTGACAAGGCAGATAATGTATCTTCAGTCCAAAGGAAGACATATGGCTTGGCCCTTTCTATTATTCTGACATTAAGACTTCCTCAAGTCCTCGTTAAACTTGATCAGATTCTGAGTGTGTGTACGACTGTAATTTTGGGTGGCAATGATGACTTAGTAGAGGAGTCCAGTGGTGATAGTATAAGCTCCAGCGGGTCTCTTAGTAAGGACAGCATTCCGAGTAAAGAATTGCGAAGAAGACAGGTCAAGTTTTCAGACCCTATAAACCATATGTCTCTGGAGGCTTCAGTAAGGGAAAACCTTCAAACATGTGCTGCCCTTCATGGAGAATCTTTTAGTAAGGCCATCGGTAACATGCATCCCTCGGCCCTTACACAGTTGAAGCAGGCATTAAAGATGGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Methyltransf_29 zf-C3HC4_3

Protein Analysis

1010

Amino Acids

113.5

Weight (kDa)

5.55

Isoelectric Point (pI)

48.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IBN_N PF03810 29 - 103 5.1e-15 Importin-beta N-terminal domain
TPR_IPO11 PF25758 655 - 1007 9e-71 Importin-11-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000529)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04430 AT1G04430 AT1G04430 AT3G23300 AT3G23300 AT4G14360 AT4G14360
fragaria_vesca FvH4_2g21260 FvH4_2g21260 FvH4_2g21260 FvH4_4g03770 FvH4_4g03770 FvH4_4g03770 FvH4_4g03770 FvH4_4g03770 FvH4_4g03770
malus_domestica MD05G1195000.v1.1 MD10G1181600.v1.1 MD10G1182100.v1.1 MD13G1215000.v1.1
prunus_persica Prupe.1G040400_v2.0.a1 Prupe.1G040400_v2.0.a1 Prupe.1G040400_v2.0.a1 Prupe.1G040400_v2.0.a1 Prupe.8G221700_v2.0.a1 Prupe.8G221700_v2.0.a1 Prupe.8G221700_v2.0.a1
pyrus_communis pycom05g18230 pycom10g15760 pycom10g15770 pycom111g01800
rosa_chinensis RchiOBHm_Chr4g0393501 RchiOBHm_Chr4g0393511 RchiOBHm_Chr4g0393631 RchiOBHm_Chr6g0287841
rosa_laevigata RLG00000009742 RLG00000012463
rosa_multiflora Rmu_sc0001531.1_g000028 Rmu_sc0003877.1_g000004 Rmu_sc0007724.1_g000003 Rmu_sc0008931.1_g000001 Rmu_sc0015036.1_g000004 Rmu_sc0021463.1_g000002 Rmu_sc0023299.1_g000001 Rmu_sc0023300.1_g000001 Rmu_sc0036005.1_g000001
rosa_roxburghii Rroxscaffold_5G00338440 Rroxscaffold_5G00338470 Rroxscaffold_5G00338730 Rroxscaffold_5G00338790 Rroxscaffold_7G00180730 Rroxscaffold_7G00180820
rosa_rugosa Rorug03G0372400 Rorug03G0372500 Rorug03G0372600 Rorug04G0000100 Rorug04G0000200 Rorug04G0000300 Rorug04G0000400 Rorug04G0000500 Rorug04G0000600.1 Rorug04G0000700 Rorug04G0000800 Rorug04G0000900 Rorug06G0192300 Rorug06G0192400 Rorug06G0192500
rosa_samantha Rh4AG047800 Rh4AG048100 Rh4BG043700 Rh4BG044600 Rh4CG050500 Rh4CG050600 Rh4CG050700 Rh4CG051400 Rh4DG045000 Rh4DG045300 Rh6AG302000 Rh6BG307900 Rh6CG301600 Rh6CG315800 Rh6DG300500
rosa_wichuraiana Rw4G003770 Rw4G003800 Rw6G026090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2546
Acc36I ACCTGC 1 cut(s) 2200
Acc65I GGTACC 1 cut(s) 1251
AccB1I GGYRCC 4 cut(s) 166, 558, 1251, 2143
AccIII TCCGGA 1 cut(s) 75
AciI CCGC 2 cut(s) 92, 2820
AclI AACGTT 1 cut(s) 584
AclWI GGATC 4 cut(s) 974, 980, 2260, 2450
AcoI YGGCCR 1 cut(s) 27
AcsI RAATTY 5 cut(s) 450, 842, 1757, 1846, 2258
AcuI CTGAAG 7 cut(s) 180, 884, 1344, 1404, 1899, 2637, 2898
AcyI GRCGYC 2 cut(s) 14, 2543
AfaI GTAC 6 cut(s) 744, 871, 1064, 1253, 2388, 2752
AfiI CCNNNNNNNGG 6 cut(s) 82, 109, 862, 1396, 2140, 2593
AflIII ACRYGT 3 cut(s) 665, 1870, 2936
AjnI CCWGG 2 cut(s) 118, 1438
AleI CACNNNNGTG 1 cut(s) 240
Alw21I GWGCWC 1 cut(s) 396
Alw26I GTCTC 6 cut(s) 503, 775, 1079, 1719, 2829, 2907
AlwI GGATC 4 cut(s) 974, 980, 2260, 2450
AlwNI CAGNNNCTG 4 cut(s) 983, 1015, 1427, 2740
Ama87I CYCGRG 2 cut(s) 250, 376
Aor13HI TCCGGA 1 cut(s) 75
ApeKI GCWGC 8 cut(s) 1410, 1460, 1472, 1475, 1703, 2035, 2489, 2942
ApoI RAATTY 5 cut(s) 450, 842, 1757, 1846, 2258
ArsI GACNNNNNNTTYG 2 cut(s) 2746, 2778
AseI ATTAAT 3 cut(s) 219, 707, 2420
Asp700I GAANNNNTTC 4 cut(s) 1269, 1884, 1950, 2928
Asp718I GGTACC 1 cut(s) 1251
AspA2I CCTAGG 1 cut(s) 1366
AspLEI GCGC 3 cut(s) 7, 97, 331
AspS9I GGNCC 4 cut(s) 751, 1370, 2680, 2995
AsuHPI GGTGA 5 cut(s) 74, 1099, 1955, 2004, 2813
AsuII TTCGAA 1 cut(s) 469
AsuNHI GCTAGC 1 cut(s) 1739
AvaI CYCGRG 2 cut(s) 250, 376
AvaII GGWCC 1 cut(s) 751
AvrII CCTAGG 1 cut(s) 1366
BaeI ACNNNNGTAYC 2 cut(s) 2370, 2403
BanI GGYRCC 4 cut(s) 166, 558, 1251, 2143
BanII GRGCYC 1 cut(s) 396
BbsI GAAGAC 2 cut(s) 2672, 2872
Bbv12I GWGCWC 1 cut(s) 396
BbvI GCAGC 8 cut(s) 1397, 1447, 1459, 1462, 1715, 2022, 2476, 2929
BccI CCATC 9 cut(s) 184, 669, 1084, 1394, 1423, 2501, 2560, 2981, 3019
BciT130I CCWGG 2 cut(s) 120, 1440
BclI TGATCA 4 cut(s) 1558, 2200, 2397, 2731
BcoDI GTCTC 6 cut(s) 503, 775, 1079, 1719, 2829, 2907
BfaI CTAG 6 cut(s) 1367, 1740, 2090, 2156, 2297, 2531
BfmI CTRYAG 5 cut(s) 948, 1673, 1708, 1955, 2379
BfoI RGCGCY 2 cut(s) 8, 98
BfuAI ACCTGC 1 cut(s) 2200
BglI GCCNNNNNGGC 1 cut(s) 2498
BglII AGATCT 1 cut(s) 2299
BisI GCNGC 9 cut(s) 93, 1411, 1461, 1473, 1476, 1704, 2036, 2490, 2943
BlnI CCTAGG 1 cut(s) 1366
BlsI GCNGC 9 cut(s) 94, 1412, 1462, 1474, 1477, 1705, 2037, 2491, 2944
Bme1390I CCNGG 2 cut(s) 120, 1440
Bme18I GGWCC 1 cut(s) 751
BmeT110I CYCGRG 2 cut(s) 250, 376
BmgT120I GGNCC 4 cut(s) 751, 1370, 2680, 2995
BmiI GGNNCC 4 cut(s) 168, 560, 1253, 2145
BmrFI CCNGG 2 cut(s) 120, 1440
BmrI ACTGGG 1 cut(s) 97
BmsI GCATC 7 cut(s) 919, 1161, 1447, 1726, 2285, 2489, 2995
BmtI GCTAGC 1 cut(s) 1743
BmuI ACTGGG 1 cut(s) 97
BoxI GACNNNNGTC 1 cut(s) 2335
BpiI GAAGAC 2 cut(s) 2672, 2872
BplI GAGNNNNNCTC 2 cut(s) 1811, 1843
BpmI CTGGAG 6 cut(s) 250, 1133, 1422, 2460, 2800, 2927
Bpu10I CCTNAGC 2 cut(s) 390, 1508
Bpu14I TTCGAA 1 cut(s) 469
BpuEI CTTGAG 2 cut(s) 2112, 2697
Bsa29I ATCGAT 1 cut(s) 2058
BsaBI GATNNNNATC 2 cut(s) 657, 984
BsaHI GRCGYC 2 cut(s) 14, 2543
BsaI GGTCTC 3 cut(s) 775, 1719, 2829
BsaJI CCNNGG 5 cut(s) 156, 249, 1366, 1439, 2991
BsaWI WCCGGW 2 cut(s) 75, 1584
BsaXI ACNNNNNCTCC 2 cut(s) 1746, 1776
Bsc4I CCNNNNNNNGG 6 cut(s) 82, 109, 862, 1396, 2140, 2593
Bse118I RCCGGY 2 cut(s) 25, 82
Bse1I ACTGG 8 cut(s) 103, 233, 758, 1084, 1116, 1646, 2443, 2796
Bse3DI GCAATG 2 cut(s) 1407, 2779
Bse8I GATNNNNATC 2 cut(s) 657, 984
BseAI TCCGGA 1 cut(s) 75
BseBI CCWGG 2 cut(s) 120, 1440
BseCI ATCGAT 1 cut(s) 2058
BseDI CCNNGG 5 cut(s) 156, 249, 1366, 1439, 2991
BseGI GGATG 7 cut(s) 835, 910, 1099, 1386, 1561, 1578, 2986
BseJI GATNNNNATC 2 cut(s) 657, 984
BseLI CCNNNNNNNGG 6 cut(s) 82, 109, 862, 1396, 2140, 2593
BseMI GCAATG 2 cut(s) 1407, 2779
BseMII CTCAG 8 cut(s) 35, 295, 381, 519, 1499, 1611, 2255, 2732
BseNI ACTGG 8 cut(s) 103, 233, 758, 1084, 1116, 1646, 2443, 2796
BseRI GAGGAG 2 cut(s) 281, 2804
BseXI GCAGC 8 cut(s) 1397, 1447, 1459, 1462, 1715, 2022, 2476, 2929
BshNI GGYRCC 4 cut(s) 166, 558, 1251, 2143
BshVI ATCGAT 1 cut(s) 2058
BsiHKAI GWGCWC 1 cut(s) 396
BsiHKCI CYCGRG 2 cut(s) 250, 376
BsiSI CCGG 4 cut(s) 26, 76, 83, 1585
BslFI GGGAC 2 cut(s) 2343, 2570
BslI CCNNNNNNNGG 6 cut(s) 82, 109, 862, 1396, 2140, 2593
BsmAI GTCTC 6 cut(s) 503, 775, 1079, 1719, 2829, 2907
BsmBI CGTCTC 1 cut(s) 503
BsmFI GGGAC 2 cut(s) 2343, 2570
BsmI GAATGC 3 cut(s) 793, 1952, 2841
Bso31I GGTCTC 3 cut(s) 775, 1719, 2829
BsoBI CYCGRG 2 cut(s) 250, 376
Bsp119I TTCGAA 1 cut(s) 469
Bsp1286I GDGCHC 1 cut(s) 396
Bsp13I TCCGGA 1 cut(s) 75
BspACI CCGC 2 cut(s) 92, 2820
BspCNI CTCAG 8 cut(s) 36, 294, 382, 518, 1500, 1612, 2256, 2733
BspDI ATCGAT 1 cut(s) 2058
BspEI TCCGGA 1 cut(s) 75
BspHI TCATGA 2 cut(s) 1167, 1276
BspLI GGNNCC 4 cut(s) 168, 560, 1253, 2145
BspMAI CTGCAG 1 cut(s) 1959
BspMI ACCTGC 1 cut(s) 2200
BspOI GCTAGC 1 cut(s) 1743
BspPI GGATC 4 cut(s) 974, 980, 2260, 2450
BspT104I TTCGAA 1 cut(s) 469
BspT107I GGYRCC 4 cut(s) 166, 558, 1251, 2143
BspTNI GGTCTC 3 cut(s) 775, 1719, 2829
BsrDI GCAATG 2 cut(s) 1407, 2779
BsrFI RCCGGY 2 cut(s) 25, 82
BsrI ACTGG 8 cut(s) 103, 233, 758, 1084, 1116, 1646, 2443, 2796
BssAI RCCGGY 2 cut(s) 25, 82
BssECI CCNNGG 5 cut(s) 156, 249, 1366, 1439, 2991
BssNI GRCGYC 2 cut(s) 14, 2543
BssT1I CCWWGG 2 cut(s) 156, 1366
Bst2UI CCWGG 2 cut(s) 120, 1440
Bst4CI ACNGT 7 cut(s) 949, 1655, 2370, 2394, 2473, 2758, 3006
Bst6I CTCTTC 2 cut(s) 306, 1239
BstACI GRCGYC 2 cut(s) 14, 2543
BstBI TTCGAA 1 cut(s) 469
BstC8I GCNNGC 8 cut(s) 538, 557, 908, 1361, 1741, 2102, 2274, 3015
BstEII GGTNACC 1 cut(s) 2003
BstENI CCTNNNNNAGG 1 cut(s) 1394
BstF5I GGATG 7 cut(s) 835, 910, 1099, 1386, 1561, 1578, 2986
BstH2I RGCGCY 2 cut(s) 8, 98
BstHHI GCGC 3 cut(s) 7, 97, 331
BstMAI GTCTC 6 cut(s) 503, 775, 1079, 1719, 2829, 2907
BstMWI GCNNNNNNNGC 8 cut(s) 11, 92, 565, 1369, 1469, 2044, 2486, 2498
BstNI CCWGG 2 cut(s) 120, 1440
BstNSI RCATGY 6 cut(s) 669, 1874, 2104, 2276, 2940, 2986
BstPAI GACNNNNGTC 1 cut(s) 2335
BstPI GGTNACC 1 cut(s) 2003
BstSCI CCNGG 2 cut(s) 118, 1438
BstSFI CTRYAG 5 cut(s) 948, 1673, 1708, 1955, 2379
BstV1I GCAGC 8 cut(s) 1397, 1447, 1459, 1462, 1715, 2022, 2476, 2929
BstV2I GAAGAC 2 cut(s) 2672, 2872
BstX2I RGATCY 3 cut(s) 979, 2299, 2455
BstXI CCANNNNNNTGG 1 cut(s) 163
BstYI RGATCY 3 cut(s) 979, 2299, 2455
Bsu15I ATCGAT 1 cut(s) 2058
BsuTUI ATCGAT 1 cut(s) 2058
BtgZI GCGATG 1 cut(s) 688
BtsCI GGATG 7 cut(s) 835, 910, 1099, 1386, 1561, 1578, 2986
BtsI GCAGTG 1 cut(s) 2410
BveI ACCTGC 1 cut(s) 2200
Cac8I GCNNGC 8 cut(s) 538, 557, 908, 1361, 1741, 2102, 2274, 3015
CaiI CAGNNNCTG 4 cut(s) 983, 1015, 1427, 2740
CciI TCATGA 2 cut(s) 1167, 1276
CfoI GCGC 3 cut(s) 7, 97, 331
Cfr10I RCCGGY 2 cut(s) 25, 82
Cfr13I GGNCC 4 cut(s) 751, 1370, 2680, 2995
ClaI ATCGAT 1 cut(s) 2058
CseI GACGC 4 cut(s) 3, 485, 740, 925
Csp6I GTAC 6 cut(s) 743, 870, 1063, 1252, 2387, 2751
CviQI GTAC 6 cut(s) 743, 870, 1063, 1252, 2387, 2751
DraI TTTAAA 1 cut(s) 1516
EaeI YGGCCR 1 cut(s) 27
Eam1104I CTCTTC 2 cut(s) 306, 1239
EarI CTCTTC 2 cut(s) 306, 1239
Ecl136II GAGCTC 1 cut(s) 394
Eco130I CCWWGG 2 cut(s) 156, 1366
Eco147I AGGCCT 1 cut(s) 118
Eco24I GRGCYC 1 cut(s) 396
Eco31I GGTCTC 3 cut(s) 775, 1719, 2829
Eco32I GATATC 1 cut(s) 531
Eco47I GGWCC 1 cut(s) 751
Eco53kI GAGCTC 1 cut(s) 394
Eco57I CTGAAG 7 cut(s) 180, 884, 1344, 1404, 1899, 2637, 2898
Eco88I CYCGRG 2 cut(s) 250, 376
Eco91I GGTNACC 1 cut(s) 2003
EcoICRI GAGCTC 1 cut(s) 394
EcoNI CCTNNNNNAGG 1 cut(s) 1394
EcoO109I RGGNCCY 1 cut(s) 1370
EcoO65I GGTNACC 1 cut(s) 2003
EcoRI GAATTC 1 cut(s) 1757
EcoRII CCWGG 2 cut(s) 118, 1438
EcoRV GATATC 1 cut(s) 531
EcoT14I CCWWGG 2 cut(s) 156, 1366
EcoT22I ATGCAT 4 cut(s) 2274, 2278, 2435, 2988
EcoT38I GRGCYC 1 cut(s) 396
ErhI CCWWGG 2 cut(s) 156, 1366
Esp3I CGTCTC 1 cut(s) 503
FalI AAGNNNNNCTT 2 cut(s) 2106, 2138
FaqI GGGAC 2 cut(s) 2343, 2570
FauI CCCGC 1 cut(s) 2813
FauNDI CATATG 4 cut(s) 1480, 2624, 2671, 2898
FbaI TGATCA 4 cut(s) 1558, 2200, 2397, 2731
Fnu4HI GCNGC 9 cut(s) 93, 1411, 1461, 1473, 1476, 1704, 2036, 2490, 2943
FokI GGATG 7 cut(s) 822, 897, 1106, 1373, 1548, 1565, 2973
FriOI GRGCYC 1 cut(s) 396
Fsp4HI GCNGC 9 cut(s) 93, 1411, 1461, 1473, 1476, 1704, 2036, 2490, 2943
FspBI CTAG 6 cut(s) 1367, 1740, 2090, 2156, 2297, 2531
GlaI GCGC 3 cut(s) 6, 96, 330
GluI GCNGC 9 cut(s) 93, 1411, 1461, 1473, 1476, 1704, 2036, 2490, 2943
GsuI CTGGAG 6 cut(s) 250, 1133, 1422, 2460, 2800, 2927
HaeII RGCGCY 2 cut(s) 8, 98
HapII CCGG 4 cut(s) 26, 76, 83, 1585
HgaI GACGC 4 cut(s) 3, 485, 740, 925
HhaI GCGC 3 cut(s) 7, 97, 331
Hin1I GRCGYC 2 cut(s) 14, 2543
Hin6I GCGC 3 cut(s) 5, 95, 329
HinP1I GCGC 3 cut(s) 5, 95, 329
HincII GTYRAC 2 cut(s) 2340, 2620
HindII GTYRAC 2 cut(s) 2340, 2620
HindIII AAGCTT 3 cut(s) 416, 1326, 1901
HpaII CCGG 4 cut(s) 26, 76, 83, 1585
HphI GGTGA 5 cut(s) 74, 1099, 1955, 2004, 2813
Hpy166II GTNNAC 8 cut(s) 489, 965, 1178, 1299, 1651, 2340, 2620, 2751
Hpy8I GTNNAC 8 cut(s) 489, 965, 1178, 1299, 1651, 2340, 2620, 2751
HpyCH4III ACNGT 7 cut(s) 949, 1655, 2370, 2394, 2473, 2758, 3006
HpyCH4IV ACGT 2 cut(s) 584, 2543
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 92, 565, 1369, 1469, 2044, 2486, 2498
HpySE526I ACGT 2 cut(s) 584, 2543
Hsp92I GRCGYC 2 cut(s) 14, 2543
HspAI GCGC 3 cut(s) 5, 95, 329
Kpn2I TCCGGA 1 cut(s) 75
KpnI GGTACC 1 cut(s) 1255
Ksp22I TGATCA 4 cut(s) 1558, 2200, 2397, 2731
LmnI GCTCC 6 cut(s) 637, 1114, 1368, 2441, 2571, 2819
Lsp1109I GCAGC 8 cut(s) 1397, 1447, 1459, 1462, 1715, 2022, 2476, 2929
LweI GCATC 7 cut(s) 919, 1161, 1447, 1726, 2285, 2489, 2995
MaeI CTAG 6 cut(s) 1367, 1740, 2090, 2156, 2297, 2531
MaeII ACGT 2 cut(s) 584, 2543
MfeI CAATTG 1 cut(s) 2589
MflI RGATCY 3 cut(s) 979, 2299, 2455
MhlI GDGCHC 1 cut(s) 396
MlyI GAGTC 3 cut(s) 604, 1820, 2801
MmeI TCCRAC 3 cut(s) 87, 778, 968
Mph1103I ATGCAT 4 cut(s) 2274, 2278, 2435, 2988
MroI TCCGGA 1 cut(s) 75
MroXI GAANNNNTTC 4 cut(s) 1269, 1884, 1950, 2928
MslI CAYNNNNRTG 3 cut(s) 177, 240, 648
MspA1I CMGCKG 1 cut(s) 2820
MspI CCGG 4 cut(s) 26, 76, 83, 1585
MspR9I CCNGG 2 cut(s) 120, 1440
MunI CAATTG 1 cut(s) 2589
Mva1269I GAATGC 3 cut(s) 793, 1952, 2841
MvaI CCWGG 2 cut(s) 120, 1440
MwoI GCNNNNNNNGC 8 cut(s) 11, 92, 565, 1369, 1469, 2044, 2486, 2498
NdeI CATATG 4 cut(s) 1480, 2624, 2671, 2898
NheI GCTAGC 1 cut(s) 1739
NlaIV GGNNCC 4 cut(s) 168, 560, 1253, 2145
NmeAIII GCCGAG 1 cut(s) 2972
NmuCI GTSAC 4 cut(s) 728, 1423, 1873, 2218
NsiI ATGCAT 4 cut(s) 2274, 2278, 2435, 2988
NspI RCATGY 6 cut(s) 669, 1874, 2104, 2276, 2940, 2986
NspV TTCGAA 1 cut(s) 469
OliI CACNNNNGTG 1 cut(s) 240
PaeI GCATGC 2 cut(s) 2104, 2276
PagI TCATGA 2 cut(s) 1167, 1276
PceI AGGCCT 1 cut(s) 118
PciI ACATGT 3 cut(s) 665, 1870, 2936
PcsI WCGNNNNNNNCGW 1 cut(s) 738
PctI GAATGC 3 cut(s) 793, 1952, 2841
PdmI GAANNNNTTC 4 cut(s) 1269, 1884, 1950, 2928
PkrI GCNGC 9 cut(s) 94, 1412, 1462, 1474, 1477, 1705, 2037, 2491, 2944
PleI GAGTC 3 cut(s) 604, 1820, 2800
PpsI GAGTC 3 cut(s) 604, 1820, 2800
PscI ACATGT 3 cut(s) 665, 1870, 2936
PshAI GACNNNNGTC 1 cut(s) 2335
PshBI ATTAAT 3 cut(s) 219, 707, 2420
Psp124BI GAGCTC 1 cut(s) 396
Psp1406I AACGTT 1 cut(s) 584
Psp6I CCWGG 2 cut(s) 118, 1438
PspEI GGTNACC 1 cut(s) 2003
PspGI CCWGG 2 cut(s) 118, 1438
PspN4I GGNNCC 4 cut(s) 168, 560, 1253, 2145
PspPI GGNCC 4 cut(s) 751, 1370, 2680, 2995
PstI CTGCAG 1 cut(s) 1959
PstNI CAGNNNCTG 4 cut(s) 983, 1015, 1427, 2740
PsuI RGATCY 3 cut(s) 979, 2299, 2455
RsaI GTAC 6 cut(s) 744, 871, 1064, 1253, 2388, 2752
RsaNI GTAC 6 cut(s) 743, 870, 1063, 1252, 2387, 2751
RseI CAYNNNNRTG 3 cut(s) 177, 240, 648
SacI GAGCTC 1 cut(s) 396
SatI GCNGC 9 cut(s) 93, 1411, 1461, 1473, 1476, 1704, 2036, 2490, 2943
Sau96I GGNCC 4 cut(s) 751, 1370, 2680, 2995
SchI GAGTC 3 cut(s) 604, 1820, 2801
ScrFI CCNGG 2 cut(s) 120, 1440
SduI GDGCHC 1 cut(s) 396
SfaNI GCATC 7 cut(s) 919, 1161, 1447, 1726, 2285, 2489, 2995
SfcI CTRYAG 5 cut(s) 948, 1673, 1708, 1955, 2379
SfuI TTCGAA 1 cut(s) 469
SinI GGWCC 1 cut(s) 751
SmiMI CAYNNNNRTG 3 cut(s) 177, 240, 648
SmlI CTYRAG 2 cut(s) 2127, 2712
SmoI CTYRAG 2 cut(s) 2127, 2712
SphI GCATGC 2 cut(s) 2104, 2276
SseBI AGGCCT 1 cut(s) 118
SsiI CCGC 2 cut(s) 92, 2820
SspI AATATT 1 cut(s) 2508
SspMI CTAG 6 cut(s) 1367, 1740, 2090, 2156, 2297, 2531
SstI GAGCTC 1 cut(s) 396
StuI AGGCCT 1 cut(s) 118
StyD4I CCNGG 2 cut(s) 118, 1438
StyI CCWWGG 2 cut(s) 156, 1366
TaaI ACNGT 7 cut(s) 949, 1655, 2370, 2394, 2473, 2758, 3006
TaiI ACGT 2 cut(s) 587, 2546
TaqI TCGA 3 cut(s) 469, 1829, 2058
TaqII GACCGA 1 cut(s) 2466
TatI WGTACW 2 cut(s) 869, 1062
TauI GCSGC 1 cut(s) 95
TseFI GTSAC 4 cut(s) 728, 1423, 1873, 2218
TseI GCWGC 8 cut(s) 1410, 1460, 1472, 1475, 1703, 2035, 2489, 2942
Tsp45I GTSAC 4 cut(s) 728, 1423, 1873, 2218
TspGWI ACGGA 1 cut(s) 1878
VpaK11BI GGWCC 1 cut(s) 751
VspI ATTAAT 3 cut(s) 219, 707, 2420
XagI CCTNNNNNAGG 1 cut(s) 1394
XapI RAATTY 5 cut(s) 450, 842, 1757, 1846, 2258
XbaI TCTAGA 1 cut(s) 2089
XceI RCATGY 6 cut(s) 669, 1874, 2104, 2276, 2940, 2986
XmaJI CCTAGG 1 cut(s) 1366
XmnI GAANNNNTTC 4 cut(s) 1269, 1884, 1950, 2928
XspI CTAG 6 cut(s) 1367, 1740, 2090, 2156, 2297, 2531
ZraI GACGTC 1 cut(s) 2544
Zsp2I ATGCAT 4 cut(s) 2274, 2278, 2435, 2988
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.