Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001029

Physical Location & Seq

Genomic Coordinates Reverse (-)

7992967 .. 7998595

Gene Structure 5629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G13780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2394 bp

ATGGAAGACGACGGCAAGAGCAGCCCCAAGTTACCGATCCCTGGAAAGAGAAATATACTAATCACCAGTGCTTTGCCTTACGTCAACAACGTTCCTCATCTCGGAAACATCATCGGATGTGTTCTGAGCGCTGATGTGTATGCTAGATACTGTCGTCTCCGTGGCTATAATGCGATTTACATATGTGGAACCGATGAATATGGGACTGCAACTGAGACCAAAGCTTTGGAGGAGAATTGCACCCCCAAGGAAATCTGTGACAAGTACCATGCCATTCATAAAGAAGTTTATGACTGGTTTGGTATAAGTTTTGACAAGTTTGGGCGAACTTCAACTCCAGAACAGACTGAGGTGTGCCAAGCAATTTTCAACAAGTTGTGGGACAACAAGTGGCTTTCAGAGAACACCATGCAGCAGCTTTACTGCGATACATGCAAGAAGTTCTTAGCTGACCGGCTTGTTGAGGGTTCTTGTCCGTTCGAAGGATGTAATTATGATTCTGCTCGTGGAGATCAGTGCGAAAAATGTGGAAAGCTCCTGAATCCTACTGAACTTAAAGATCCGAAGTGCAAGGTCTGTCAAAACACACCCCGAATTCGCGACACAGACCACCTGTTTATTGAGCTTCCGTTACTGAAAGATAGGTTGGAAGCGTATATTAAAAAGACCTCTGTTACTGGATCTTGGAGTCAAAATGCTATTCAAACGACAAATGCATGGCTTAGGGATGGGCTTAGACAGAGATGCATTACGAGGGATCTTAAGTGGGGAGTGCCTGTCCCACATGAGAAATACAAGGACAAAGTCTTCTATGTTTGGTTTGATGCTCCTATTGGATACGTCTCAATAACGTCTTGCTACACATCTGAATGGGAGAAGTGGTGGAAGAATCCTGAGAATGTGGAGCTTTATCAGTTTATGGGGAAAGACAATGTGCCATTTCACACTGTGATGTTTCCCTCTACCCAGCTTGGAACTGAGGAAAATTGGACACTCATGAAGACAATCAGTGTGACTGAATATTTAAACTATGAAGACGGAAAGTTCTCCAAGAGTAAAGGTGTTGGAGTGTTTGGTAATGATGTAAAAGATACAAATATACCTGTCGAAGTGTGGAGATACTACTTGCTGACCAACAGGCCTGAGGTGTCTGACACATCGTTTTCATGGACTGATTTGCAAGCAAAACTGAATGGCGAGTTGCTGAGCAACCTAGGCAACTTTGTTAATCGAGTTCTGAGTTTTATAGCAAAGCCTGATAATGCAGGTTACGGGTCTGTCATTCCTGATGCTCATGATGCTGAATCTCATTCTTTAACAAAATCACTGGCGGAAAAGGTTGAAAAGTTTGTGGCAGAGTATGTTGAAGCCATGGAAAAGGTTAAGCTCAAGCAGGGACTGAAAACTGCTATGCTGATTTCAAGCGAAGGGAACTATTACTTGCAGGCAAGCCAATTTTGGAAACTTTACAAGGAAGATAAACCTTTGTGTGCAGTTGTTATAAGAACTGCTGCTGGTTTAGTACACCTTCTTGCTCAATTGTTAGAACCTTTCATGCCATCCTTTTCTTGTGAGGTATTTAAACAGCTAAATTTGCCTCCACAATTTTCTCTCTCCGACGAGAGGGGAGAGGTATTACTAGCAAGTAGACCATGGGATATTCTGCCTCCTAGCCACAGGATAGGCACCCCTCAACCTTTGTTCAAGGAGTTGGAAAACGACGAAGTGGCACGGTACAGAGAAAAGTTTGCTGGAAGTCAGTCTGATAGACGTGCTAGGGATGAAGCAGCAAATTTGGCGGATCAACTTAATAAAACAAAACTTTCAGATGCCAAGAAACAAAAGGCATCATCAAAAGGCGGAGGAAAACCCAAACCTCAACCAGCTGCTGATCGTGAAATAACTATGGCAAGACTTGATATCCGAGTTGGTAAAATTGTGAAGGCTGAGAAACATCCCAAGGCAGATGCATTGTATGTAGAAGAAATTGATGTTGGGGGTGGTGAAATTCGCACTGTTGTCAGTGGACTGGTCAAATATATACCTCTTGAGGAAATGCAGAATCGTATGGTTTGTGTTCTTTGCAACTTGAAACCGGCGAAAATGAGGGATATTGTGTCACAAGCAATGGTTCTTGCAGCTTCCAGTAGTGATGGAAGCAAGGTGGAGTTAGTTGAGCCCCCTAAAACTGCTAATATTGGAGAGCGAGTTACATTTCCCGGGTTTGAAGGCGAGCCAGACGATGTCTTAAACCCAAAGAAGAAAGTATGGGAGACGCTTTTGGTTGATCTAAACACAAAAGAGAATCTAGTTGCTTGCTACAAAGATGTGCCCTTCACTACATCTGCAGGTGTATGCAAAGTTTCATCCATCAGCAATGGCACGATCCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016070 GO:0019538 GO:0019752 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046686 GO:0050896 GO:0071704 GO:0090304 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00450 ko00970 map00450 map00970

Pfam Domains

Protein Families

tRNA-synt_1g tRNA_bind

Protein Analysis

797

Amino Acids

89.85

Weight (kDa)

6.65

Isoelectric Point (pI)

30.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1g	PF09334	19 - 413	5.4e-153	tRNA synthetases class I (M)
tRNA-synt_1	PF00133	20 - 262	1.2e-09	tRNA synthetases class I (I, L, M and V)
Anticodon_3	PF19303	439 - 587	3e-19	Anticodon binding domain of methionyl tRNA ligase
tRNA_bind	PF01588	641 - 735	1.5e-33	Putative tRNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001029)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13780
fragaria_vesca	FvH4_4g13560 FvH4_4g13560 FvH4_4g13560 FvH4_4g36101 FvH4_4g36103
malus_domestica	MD04G1013400.v1.1 MD05G1172700.v1.1 MD10G1161000.v1.1
prunus_persica	Prupe.1G159500_v2.0.a1 Prupe.1G159500_v2.0.a1 Prupe.1G159500_v2.0.a1 Prupe.2G130000_v2.0.a1 Prupe.2G130800_v2.0.a1 Prupe.8G200100_v2.0.a1 Prupe.8G200100_v2.0.a1
pyrus_communis	pycom04g01040 pycom05g15930 pycom10g13910
rosa_chinensis	RchiOBHm_Chr1g0332221 RchiOBHm_Chr2g0166871 RchiOBHm_Chr4g0414311 RchiOBHm_Chr4g0442441
rosa_laevigata	RLG00000005711 RLG00000008159 RLG00000021676
rosa_multiflora	Rmu_co8251943.1_g000001 Rmu_co8341625.1_g000001 Rmu_sc0000733.1_g000008 Rmu_sc0001063.1_g000003 Rmu_sc0002735.1_g000014 Rmu_sc0005196.1_g000006 Rmu_sc0005344.1_g000007 Rmu_sc0032860.1_g000001
rosa_roxburghii	Rroxscaffold_2G00084040 Rroxscaffold_2G00084460 Rroxscaffold_4G00318360 Rroxscaffold_5G00358180
rosa_rugosa	Rorug01G0098500 Rorug01G0098600 Rorug01G0098700 Rorug01G0098800 Rorug01G0098900 Rorug02G0526100 Rorug04G0126800
rosa_samantha	Rh1AG122600 Rh1BG093900 Rh1CG117200 Rh1DG128200 Rh2AG593100 Rh2BG604400 Rh2CG575300 Rh2DG616000 Rh4AG184800 Rh4BG184300 Rh4CG197700 Rh4DG181400 Rh4DG182000
rosa_wichuraiana	Rw1G010000 Rw2G049370 Rw4G015810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1502
AarI	CACCTGC	1 cut(s)	2339
Acc36I	ACCTGC	2 cut(s)	1256, 2339
AccB1I	GGYRCC	1 cut(s)	1685
AccI	GTMKAC	1 cut(s)	1648
AccII	CGCG	1 cut(s)	600
AciI	CCGC	3 cut(s)	1331, 1799, 1860
AclI	AACGTT	1 cut(s)	90
AclWI	GGATC	6 cut(s)	31, 554, 688, 765, 1809, 2380
AcsI	RAATTY	4 cut(s)	594, 1591, 1792, 2007
AdeI	CACNNNGTG	1 cut(s)	949
AfaI	GTAC	3 cut(s)	266, 1524, 1736
AfeI	AGCGCT	1 cut(s)	130
AfiI	CCNNNNNNNGG	4 cut(s)	41, 101, 482, 1623
AflII	CTTAAG	1 cut(s)	761
AgsI	TTSAA	9 cut(s)	333, 370, 704, 1343, 1367, 1422, 1705, 2092, 2228
AjiI	CACGTC	1 cut(s)	1772
AjnI	CCWGG	1 cut(s)	40
AjuI	GAANNNNNNNTTGG	4 cut(s)	629, 661, 1977, 2009
AloI	GAACNNNNNNTCC	2 cut(s)	319, 351
Alw26I	GTCTC	4 cut(s)	161, 209, 847, 2267
AlwI	GGATC	6 cut(s)	31, 554, 688, 765, 1809, 2380
AlwNI	CAGNNNCTG	2 cut(s)	1399, 1889
Ama87I	CYCGRG	1 cut(s)	2219
Aor51HI	AGCGCT	1 cut(s)	130
AoxI	GGCC	1 cut(s)	1139
ApeKI	GCWGC	7 cut(s)	21, 412, 415, 1511, 1787, 1886, 2138
ApoI	RAATTY	4 cut(s)	594, 1591, 1792, 2007
ArsI	GACNNNNNNTTYG	2 cut(s)	208, 240
AspA2I	CCTAGG	1 cut(s)	1213
AspLEI	GCGC	1 cut(s)	131
AsuC2I	CCSGG	2 cut(s)	2220, 2221
AsuHPI	GGTGA	2 cut(s)	55, 2015
AsuII	TTCGAA	1 cut(s)	480
AvaI	CYCGRG	1 cut(s)	2219
AvrII	CCTAGG	1 cut(s)	1213
AxyI	CCTNAGG	1 cut(s)	1143
BaeGI	GKGCMC	1 cut(s)	2334
BaeI	ACNNNNGTAYC	2 cut(s)	139, 172
BanI	GGYRCC	1 cut(s)	1685
BanII	GRGCYC	1 cut(s)	2181
BauI	CACGAG	1 cut(s)	504
BbsI	GAAGAC	4 cut(s)	12, 799, 1007, 1041
BbvI	GCAGC	7 cut(s)	33, 424, 427, 1498, 1799, 1873, 2150
BccI	CCATC	4 cut(s)	722, 1567, 2147, 2378
BceAI	ACGGC	1 cut(s)	28
BciT130I	CCWGG	1 cut(s)	42
BciVI	GTATCC	1 cut(s)	830
BcnI	CCSGG	2 cut(s)	2220, 2221
BcoDI	GTCTC	4 cut(s)	161, 209, 847, 2267
BfaI	CTAG	6 cut(s)	144, 1214, 1640, 1671, 1776, 2309
BfmI	CTRYAG	1 cut(s)	2346
BfoI	RGCGCY	1 cut(s)	132
BfrI	CTTAAG	1 cut(s)	761
BfuAI	ACCTGC	2 cut(s)	1256, 2339
BfuI	GTATCC	1 cut(s)	830
BisI	GCNGC	7 cut(s)	22, 413, 416, 1512, 1788, 1887, 2139
BlnI	CCTAGG	1 cut(s)	1213
BlpI	GCTNAGC	1 cut(s)	1205
BlsI	GCNGC	7 cut(s)	23, 414, 417, 1513, 1789, 1888, 2140
Bme1390I	CCNGG	3 cut(s)	42, 2220, 2221
BmeT110I	CYCGRG	1 cut(s)	2219
BmgBI	CACGTC	1 cut(s)	1772
BmiI	GGNNCC	2 cut(s)	190, 1687
BmrFI	CCNGG	3 cut(s)	42, 2220, 2221
BmsI	GCATC	7 cut(s)	734, 814, 1279, 1288, 1819, 1856, 1957
BpiI	GAAGAC	4 cut(s)	12, 799, 1007, 1041
BpmI	CTGGAG	1 cut(s)	321
Bpu10I	CCTNAGC	1 cut(s)	722
Bpu1102I	GCTNAGC	1 cut(s)	1205
Bpu14I	TTCGAA	1 cut(s)	480
BpuEI	CTTGAG	2 cut(s)	1373, 2069
BpuMI	CCSGG	2 cut(s)	2220, 2221
BsaI	GGTCTC	1 cut(s)	209
BsaJI	CCNNGG	8 cut(s)	40, 160, 246, 1213, 1371, 1652, 1959, 2219
BsaWI	WCCGGW	1 cut(s)	2388
BsaXI	ACNNNNNCTCC	8 cut(s)	319, 349, 762, 792, 866, 896, 2193, 2223
Bsc4I	CCNNNNNNNGG	4 cut(s)	41, 101, 482, 1623
Bse118I	RCCGGY	2 cut(s)	453, 2095
Bse1I	ACTGG	6 cut(s)	66, 299, 682, 1332, 2034, 2145
Bse21I	CCTNAGG	1 cut(s)	1143
Bse3DI	GCAATG	2 cut(s)	2133, 2383
BseBI	CCWGG	1 cut(s)	42
BseDI	CCNNGG	8 cut(s)	40, 160, 246, 1213, 1371, 1652, 1959, 2219
BseGI	GGATG	7 cut(s)	122, 491, 733, 1559, 1786, 1954, 2366
BseLI	CCNNNNNNNGG	4 cut(s)	41, 101, 482, 1623
BseMI	GCAATG	2 cut(s)	2133, 2383
BseMII	CTCAG	9 cut(s)	116, 204, 339, 885, 969, 1134, 1196, 1229, 1938
BseNI	ACTGG	6 cut(s)	66, 299, 682, 1332, 2034, 2145
BseRI	GAGGAG	1 cut(s)	245
BseSI	GKGCMC	1 cut(s)	2334
BseXI	GCAGC	7 cut(s)	33, 424, 427, 1498, 1799, 1873, 2150
BseYI	CCCAGC	1 cut(s)	966
BsgI	GTGCAG	1 cut(s)	1512
Bsh1236I	CGCG	1 cut(s)	600
BshFI	GGCC	1 cut(s)	1141
BshNI	GGYRCC	1 cut(s)	1685
BsiHKCI	CYCGRG	1 cut(s)	2219
BsiSI	CCGG	4 cut(s)	454, 2096, 2220, 2389
BslFI	GGGAC	4 cut(s)	217, 395, 764, 1410
BslI	CCNNNNNNNGG	4 cut(s)	41, 101, 482, 1623
BsmAI	GTCTC	4 cut(s)	161, 209, 847, 2267
BsmBI	CGTCTC	3 cut(s)	161, 847, 2267
BsmFI	GGGAC	4 cut(s)	217, 395, 764, 1410
BsnI	GGCC	1 cut(s)	1141
Bso31I	GGTCTC	1 cut(s)	209
BsoBI	CYCGRG	1 cut(s)	2219
Bsp119I	TTCGAA	1 cut(s)	480
Bsp1286I	GDGCHC	2 cut(s)	2181, 2334
Bsp143I	GATC	9 cut(s)	36, 511, 559, 680, 757, 1801, 1891, 2287, 2385
Bsp1720I	GCTNAGC	1 cut(s)	1205
Bsp19I	CCATGG	2 cut(s)	1371, 1652
Bsp68I	TCGCGA	1 cut(s)	600
BspACI	CCGC	3 cut(s)	1331, 1799, 1860
BspANI	GGCC	1 cut(s)	1141
BspCNI	CTCAG	9 cut(s)	117, 205, 340, 886, 970, 1135, 1197, 1230, 1939
BspFNI	CGCG	1 cut(s)	600
BspHI	TCATGA	2 cut(s)	996, 1294
BspLI	GGNNCC	2 cut(s)	190, 1687
BspMAI	CTGCAG	1 cut(s)	2350
BspMI	ACCTGC	2 cut(s)	1256, 2339
BspPI	GGATC	6 cut(s)	31, 554, 688, 765, 1809, 2380
BspT104I	TTCGAA	1 cut(s)	480
BspT107I	GGYRCC	1 cut(s)	1685
BspTI	CTTAAG	1 cut(s)	761
BspTNI	GGTCTC	1 cut(s)	209
BsrDI	GCAATG	2 cut(s)	2133, 2383
BsrFI	RCCGGY	2 cut(s)	453, 2095
BsrI	ACTGG	6 cut(s)	66, 299, 682, 1332, 2034, 2145
BssAI	RCCGGY	2 cut(s)	453, 2095
BssECI	CCNNGG	8 cut(s)	40, 160, 246, 1213, 1371, 1652, 1959, 2219
BssMI	GATC	9 cut(s)	36, 511, 559, 680, 757, 1801, 1891, 2287, 2385
BssSI	CACGAG	1 cut(s)	504
BssT1I	CCWWGG	5 cut(s)	246, 1213, 1371, 1652, 1959
Bst2BI	CACGAG	1 cut(s)	504
Bst2UI	CCWGG	1 cut(s)	42
Bst4CI	ACNGT	4 cut(s)	152, 949, 1734, 2017
BstAFI	CTTAAG	1 cut(s)	761
BstBI	TTCGAA	1 cut(s)	480
BstC8I	GCNNGC	5 cut(s)	1182, 1446, 1450, 2234, 2317
BstDSI	CCRYGG	3 cut(s)	160, 1371, 1652
BstF5I	GGATG	7 cut(s)	122, 491, 733, 1559, 1786, 1954, 2366
BstFNI	CGCG	1 cut(s)	600
BstH2I	RGCGCY	1 cut(s)	132
BstHHI	GCGC	1 cut(s)	131
BstKTI	GATC	9 cut(s)	39, 514, 562, 683, 760, 1804, 1894, 2290, 2388
BstMAI	GTCTC	4 cut(s)	161, 209, 847, 2267
BstMBI	GATC	9 cut(s)	36, 511, 559, 680, 757, 1801, 1891, 2287, 2385
BstMWI	GCNNNNNNNGC	6 cut(s)	21, 432, 1215, 1298, 1594, 1796
BstNI	CCWGG	1 cut(s)	42
BstNSI	RCATGY	1 cut(s)	435
BstSCI	CCNGG	3 cut(s)	40, 2218, 2219
BstSFI	CTRYAG	1 cut(s)	2346
BstSLI	GKGCMC	1 cut(s)	2334
BstUI	CGCG	1 cut(s)	600
BstV1I	GCAGC	7 cut(s)	33, 424, 427, 1498, 1799, 1873, 2150
BstV2I	GAAGAC	4 cut(s)	12, 799, 1007, 1041
BstX2I	RGATCY	3 cut(s)	559, 680, 757
BstXI	CCANNNNNNTGG	1 cut(s)	226
BstYI	RGATCY	3 cut(s)	559, 680, 757
Bsu36I	CCTNAGG	1 cut(s)	1143
BsuI	GTATCC	1 cut(s)	830
BsuRI	GGCC	1 cut(s)	1141
BtgI	CCRYGG	3 cut(s)	160, 1371, 1652
BtrI	CACGTC	1 cut(s)	1772
BtsCI	GGATG	7 cut(s)	122, 491, 733, 1559, 1786, 1954, 2366
BtsIMutI	CAGTG	7 cut(s)	73, 521, 945, 1015, 1325, 2013, 2029
BtuMI	TCGCGA	1 cut(s)	600
BveI	ACCTGC	2 cut(s)	1256, 2339
Cac8I	GCNNGC	5 cut(s)	1182, 1446, 1450, 2234, 2317
CaiI	CAGNNNCTG	2 cut(s)	1399, 1889
CciI	TCATGA	2 cut(s)	996, 1294
CfoI	GCGC	1 cut(s)	131
Cfr10I	RCCGGY	2 cut(s)	453, 2095
Cfr9I	CCCGGG	1 cut(s)	2219
CseI	GACGC	1 cut(s)	2284
Csp6I	GTAC	3 cut(s)	265, 1523, 1735
CviQI	GTAC	3 cut(s)	265, 1523, 1735
DpnI	GATC	9 cut(s)	38, 513, 561, 682, 759, 1803, 1893, 2289, 2387
DpnII	GATC	9 cut(s)	36, 511, 559, 680, 757, 1801, 1891, 2287, 2385
DraI	TTTAAA	2 cut(s)	1026, 1582
DraIII	CACNNNGTG	1 cut(s)	949
EciI	GGCGGA	3 cut(s)	1346, 1814, 1875
Eco130I	CCWWGG	5 cut(s)	246, 1213, 1371, 1652, 1959
Eco147I	AGGCCT	1 cut(s)	1141
Eco24I	GRGCYC	1 cut(s)	2181
Eco31I	GGTCTC	1 cut(s)	209
Eco32I	GATATC	1 cut(s)	1921
Eco47III	AGCGCT	1 cut(s)	130
Eco81I	CCTNAGG	1 cut(s)	1143
Eco88I	CYCGRG	1 cut(s)	2219
EcoRI	GAATTC	1 cut(s)	594
EcoRII	CCWGG	1 cut(s)	40
EcoRV	GATATC	1 cut(s)	1921
EcoT14I	CCWWGG	5 cut(s)	246, 1213, 1371, 1652, 1959
EcoT22I	ATGCAT	3 cut(s)	718, 749, 1972
EcoT38I	GRGCYC	1 cut(s)	2181
ErhI	CCWWGG	5 cut(s)	246, 1213, 1371, 1652, 1959
Esp3I	CGTCTC	3 cut(s)	161, 847, 2267
FalI	AAGNNNNNCTT	2 cut(s)	428, 460
FaqI	GGGAC	4 cut(s)	217, 395, 764, 1410
FauNDI	CATATG	1 cut(s)	182
FblI	GTMKAC	1 cut(s)	1648
Fnu4HI	GCNGC	7 cut(s)	22, 413, 416, 1512, 1788, 1887, 2139
FokI	GGATG	7 cut(s)	129, 498, 740, 1546, 1793, 1941, 2353
FriOI	GRGCYC	1 cut(s)	2181
Fsp4HI	GCNGC	7 cut(s)	22, 413, 416, 1512, 1788, 1887, 2139
FspBI	CTAG	6 cut(s)	144, 1214, 1640, 1671, 1776, 2309
GlaI	GCGC	1 cut(s)	130
GluI	GCNGC	7 cut(s)	22, 413, 416, 1512, 1788, 1887, 2139
GsaI	CCCAGC	1 cut(s)	970
GsuI	CTGGAG	1 cut(s)	321
HaeII	RGCGCY	1 cut(s)	132
HaeIII	GGCC	1 cut(s)	1141
HapII	CCGG	4 cut(s)	454, 2096, 2220, 2389
HgaI	GACGC	1 cut(s)	2284
HhaI	GCGC	1 cut(s)	131
Hin6I	GCGC	1 cut(s)	129
HinP1I	GCGC	1 cut(s)	129
HincII	GTYRAC	1 cut(s)	85
HindII	GTYRAC	1 cut(s)	85
HindIII	AAGCTT	1 cut(s)	222
HinfI	GANTC	7 cut(s)	497, 541, 688, 889, 1304, 2062, 2305
HpaII	CCGG	4 cut(s)	454, 2096, 2220, 2389
HphI	GGTGA	2 cut(s)	55, 2015
Hpy166II	GTNNAC	4 cut(s)	85, 1525, 1649, 2027
Hpy188III	TCNNGA	9 cut(s)	338, 538, 599, 893, 997, 1286, 1295, 1895, 2048
Hpy8I	GTNNAC	4 cut(s)	85, 1525, 1649, 2027
Hpy99I	CGWCG	3 cut(s)	14, 1622, 1724
HpyAV	CCTTC	6 cut(s)	476, 1421, 1538, 1936, 2222, 2344
HpyCH4III	ACNGT	4 cut(s)	152, 949, 1734, 2017
HpyCH4IV	ACGT	5 cut(s)	81, 90, 840, 851, 1771
HpyF10VI	GCNNNNNNNGC	6 cut(s)	21, 432, 1215, 1298, 1594, 1796
HpySE526I	ACGT	5 cut(s)	81, 90, 840, 851, 1771
HspAI	GCGC	1 cut(s)	129
Kzo9I	GATC	9 cut(s)	36, 511, 559, 680, 757, 1801, 1891, 2287, 2385
LmnI	GCTCC	3 cut(s)	540, 832, 904
Lsp1109I	GCAGC	7 cut(s)	33, 424, 427, 1498, 1799, 1873, 2150
LweI	GCATC	7 cut(s)	734, 814, 1279, 1288, 1819, 1856, 1957
MaeI	CTAG	6 cut(s)	144, 1214, 1640, 1671, 1776, 2309
MaeII	ACGT	5 cut(s)	81, 90, 840, 851, 1771
MaeIII	GTNAC	8 cut(s)	30, 257, 630, 673, 1012, 1268, 2118, 2209
MalI	GATC	9 cut(s)	38, 513, 561, 682, 759, 1803, 1893, 2289, 2387
MboI	GATC	9 cut(s)	36, 511, 559, 680, 757, 1801, 1891, 2287, 2385
MboII	GAAGA	8 cut(s)	17, 799, 898, 1012, 1046, 1487, 1994, 2272
MfeI	CAATTG	1 cut(s)	1538
MflI	RGATCY	3 cut(s)	559, 680, 757
MhlI	GDGCHC	2 cut(s)	2181, 2334
MlyI	GAGTC	1 cut(s)	697
MmeI	TCCRAC	4 cut(s)	627, 1045, 1641, 1692
Mph1103I	ATGCAT	3 cut(s)	718, 749, 1972
MslI	CAYNNNNRTG	2 cut(s)	868, 950
MspA1I	CMGCKG	1 cut(s)	1886
MspCI	CTTAAG	1 cut(s)	761
MspI	CCGG	4 cut(s)	454, 2096, 2220, 2389
MspR9I	CCNGG	3 cut(s)	42, 2220, 2221
MunI	CAATTG	1 cut(s)	1538
MvaI	CCWGG	1 cut(s)	42
MvnI	CGCG	1 cut(s)	600
MwoI	GCNNNNNNNGC	6 cut(s)	21, 432, 1215, 1298, 1594, 1796
NciI	CCSGG	2 cut(s)	2220, 2221
NcoI	CCATGG	2 cut(s)	1371, 1652
NdeI	CATATG	1 cut(s)	182
NdeII	GATC	9 cut(s)	36, 511, 559, 680, 757, 1801, 1891, 2287, 2385
NlaIV	GGNNCC	2 cut(s)	190, 1687
NmuCI	GTSAC	3 cut(s)	257, 1012, 2118
NruI	TCGCGA	1 cut(s)	600
NsiI	ATGCAT	3 cut(s)	718, 749, 1972
NspI	RCATGY	1 cut(s)	435
NspV	TTCGAA	1 cut(s)	480
PagI	TCATGA	2 cut(s)	996, 1294
PaqCI	CACCTGC	1 cut(s)	2339
PceI	AGGCCT	1 cut(s)	1141
PcsI	WCGNNNNNNNCGW	1 cut(s)	87
PfeI	GAWTC	6 cut(s)	497, 541, 889, 1304, 2062, 2305
PflFI	GACNNNGTC	2 cut(s)	803, 2243
PkrI	GCNGC	7 cut(s)	23, 414, 417, 1513, 1789, 1888, 2140
PleI	GAGTC	1 cut(s)	696
PpsI	GAGTC	1 cut(s)	696
PsiI	TTATAA	1 cut(s)	1502
Psp1406I	AACGTT	1 cut(s)	90
Psp6I	CCWGG	1 cut(s)	40
PspFI	CCCAGC	1 cut(s)	966
PspGI	CCWGG	1 cut(s)	40
PspN4I	GGNNCC	2 cut(s)	190, 1687
PstI	CTGCAG	1 cut(s)	2350
PstNI	CAGNNNCTG	2 cut(s)	1399, 1889
PsuI	RGATCY	3 cut(s)	559, 680, 757
PsyI	GACNNNGTC	2 cut(s)	803, 2243
PvuII	CAGCTG	1 cut(s)	1886
RruI	TCGCGA	1 cut(s)	600
RsaI	GTAC	3 cut(s)	266, 1524, 1736
RsaNI	GTAC	3 cut(s)	265, 1523, 1735
RseI	CAYNNNNRTG	2 cut(s)	868, 950
SatI	GCNGC	7 cut(s)	22, 413, 416, 1512, 1788, 1887, 2139
Sau3AI	GATC	9 cut(s)	36, 511, 559, 680, 757, 1801, 1891, 2287, 2385
SchI	GAGTC	1 cut(s)	697
ScrFI	CCNGG	3 cut(s)	42, 2220, 2221
SduI	GDGCHC	2 cut(s)	2181, 2334
SfaNI	GCATC	7 cut(s)	734, 814, 1279, 1288, 1819, 1856, 1957
SfcI	CTRYAG	1 cut(s)	2346
SfuI	TTCGAA	1 cut(s)	480
SmaI	CCCGGG	1 cut(s)	2221
SmiMI	CAYNNNNRTG	2 cut(s)	868, 950
SmlI	CTYRAG	3 cut(s)	761, 1388, 2048
SmoI	CTYRAG	3 cut(s)	761, 1388, 2048
SseBI	AGGCCT	1 cut(s)	1141
SsiI	CCGC	3 cut(s)	1331, 1799, 1860
SspI	AATATT	2 cut(s)	1022, 2197
SspMI	CTAG	6 cut(s)	144, 1214, 1640, 1671, 1776, 2309
StuI	AGGCCT	1 cut(s)	1141
StyD4I	CCNGG	3 cut(s)	40, 2218, 2219
StyI	CCWWGG	5 cut(s)	246, 1213, 1371, 1652, 1959
TaaI	ACNGT	4 cut(s)	152, 949, 1734, 2017
TaiI	ACGT	5 cut(s)	84, 93, 843, 854, 1774
TaqI	TCGA	3 cut(s)	480, 1107, 1231
TatI	WGTACW	1 cut(s)	1522
TfiI	GAWTC	6 cut(s)	497, 541, 889, 1304, 2062, 2305
TscAI	CASTG	7 cut(s)	73, 521, 952, 1015, 1332, 2020, 2029
TseFI	GTSAC	3 cut(s)	257, 1012, 2118
TseI	GCWGC	7 cut(s)	21, 412, 415, 1511, 1787, 1886, 2138
Tsp45I	GTSAC	3 cut(s)	257, 1012, 2118
TspDTI	ATGAA	8 cut(s)	210, 266, 1013, 1047, 1155, 1543, 1797, 2355
TspGWI	ACGGA	4 cut(s)	149, 465, 618, 1053
TspMI	CCCGGG	1 cut(s)	2219
TspRI	CASTG	7 cut(s)	73, 521, 952, 1015, 1332, 2020, 2029
Tth111I	GACNNNGTC	2 cut(s)	803, 2243
Vha464I	CTTAAG	1 cut(s)	761
XapI	RAATTY	4 cut(s)	594, 1591, 1792, 2007
XceI	RCATGY	1 cut(s)	435
XmaI	CCCGGG	1 cut(s)	2219
XmaJI	CCTAGG	1 cut(s)	1213
XmiI	GTMKAC	1 cut(s)	1648
XspI	CTAG	6 cut(s)	144, 1214, 1640, 1671, 1776, 2309
Zsp2I	ATGCAT	3 cut(s)	718, 749, 1972

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.