Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0001029

Physical Location & Seq

Genomic Coordinates Reverse (-)

16376441 .. 16382301

Gene Structure 5861 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG093900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGGGAGACCTCAAGGAGGAGGGCCTCCTCAAGCTCCCCATCCCCGGCCAACGCAACGTCCTCATCACCAGCGCGCTGCCGTACGTCAACAACGTCCCTCATCTCGGCAACATCATCGGCTGCGTTCTCAGTGCCGACGTCTTCGCTCGCTACTGCCGTCTCCGGGGATACAACACCCTCTATATCTGCGGCACCGATGAGTACGGCACCGCCACCGAGACCAAAGCCATGGAGGACAAGTGTAGCCCCAAGGAGATCTGCGATAAGTACCACGCGATTCATCGGCAGGTGTATGAGTGGTTCAATATAAGTTTTGACAAATTCGGGCGAACGTCGACGCCGGAGCAGACGGAGGTGTGCCAAGCCATTTTCAGTCGGCTGCTGGAGAATAATTGGCTCTCTGAGAACACAATGCAGCAGCTCTACTGTGATACTTGCACACGGTTTTTAGCTGACAGGCTCGTGGAGGGGACGTGCCCAACGCAAGGTTGTGATTATACTTCTGCAAGAGGAGATCAGTGTGAGAACTGTGGAAAGCTTTTAAACCCTACCGAATTAAAGGATCCAAAGTGCAAGGTCTGTAAGTCGACTCCACGGATTCGTGATACAAACCATTTGTTTCTGGAATTGCCTTTGCTGAAGGATAGGTTGGAAGAGTATATTAATAAAATGTCAGTGGAGGGGTCTTGGAGCCAGAATGCCATTCAAGCAACAAATGCGTGGCTCAGAGAGGGGCTTAAACAACGGTGTATCACCAGGGATCTGAAGTGGGGGGTTCCAGTTCCACATGATAACTTCAGGGATAAGGTTTTCTATGTGTGGTTTGATGCGCCTATTGGATATGTTTCAATTACTAAATGCTACACTCCAGATTGGGAGAAATGGTGGAAGAATCCAGAGGATGTGGAGTTGTATCAGTTTATGGGCAAAGATAATGTGCCATTCCACACAGTGATGTTTCCTTCCACACTTCTTGGAACTGGTGAAAATTGGACTTTAATGAAGACAATTCGTGTTACTGAATACTTGAACTATGAAGCAGGAAAGTTTTCCAAGAGTAAAGGGATTGGAGTATTTGGAAACGATGCCAAAGATACAAACATTCCTGTTGAAGTATGGCGATATTACTTGCTAACCAATAGGCCCGAGGTGTCGGATACATTATTTACGTGGGTGGATTTGCAAGCGAAGCTCAACAGTGAATTGCTGAATAATTTGGGCAACTTCATTAACCGAGTTTTAAGTTTTGTTGCCAAACCTTCAGGTCAAGGATATGACTCCATTATTCCAGATGCTCAAGATGCCATCTCTGATCCTTTGACAGAGAAAATAGCTGAGAAAGTGGGTAAATATGTGGAGCAATATGTAGAGGCCATGGAGAAGGTAAAACTAAAGCAAGGACTCAAACTAGCAATGAGCATTTCTAGTGAAGGGAATGCATATCTGCAAGAAAGTCGGTTCTGGAAGCTTTACAAGGAAGACCAACCTCGCTGCTCCATTGTTATGAGAACTGCAGTGGGGCTAGTGCATCTTCTTGCTTGCTTATTAGAACCCTTCATGCCATCGTTTTCTGTTAAGGTATTTAAGCAGCTTAATCTGCCCCCTGAGACGCACATATCACTTTGTGATGATAAAGGTGATACTGATAGGGCAAGACGGCCATGGGAGATTGTACCTAGAGGTCACAAGATTGGGAAACCAGAGCCGTTGTTCAAGGAATTGATTAATGATGAAGTAGATTCTCTAAGGAAGAAGTTTGCTGGAAGTCAGGCCGATAGAAAGGAAAGGGAAGAAGCTGAAGCAGTGAAGTTGGCTGAGCAGCTCAAGAAATCAAAAGTTTCAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016070 GO:0019538 GO:0019752 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046686 GO:0050896 GO:0071704 GO:0090304 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00450 ko00970 map00450 map00970

Pfam Domains

Protein Families

Anticodon_1 tRNA-synt_1g tRNA_bind

Protein Analysis

615

Amino Acids

70.38

Weight (kDa)

6.56

Isoelectric Point (pI)

28.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1g	PF09334	20 - 414	1.2e-154	tRNA synthetases class I (M)
tRNA-synt_1	PF00133	22 - 263	3.3e-09	tRNA synthetases class I (I, L, M and V)
Anticodon_3	PF19303	441 - 590	5.5e-19	Anticodon binding domain of methionyl tRNA ligase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001029)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13780
fragaria_vesca	FvH4_4g13560 FvH4_4g13560 FvH4_4g13560 FvH4_4g36101 FvH4_4g36103
malus_domestica	MD04G1013400.v1.1 MD05G1172700.v1.1 MD10G1161000.v1.1
prunus_persica	Prupe.1G159500_v2.0.a1 Prupe.1G159500_v2.0.a1 Prupe.1G159500_v2.0.a1 Prupe.2G130000_v2.0.a1 Prupe.2G130800_v2.0.a1 Prupe.8G200100_v2.0.a1 Prupe.8G200100_v2.0.a1
pyrus_communis	pycom04g01040 pycom05g15930 pycom10g13910
rosa_chinensis	RchiOBHm_Chr1g0332221 RchiOBHm_Chr2g0166871 RchiOBHm_Chr4g0414311 RchiOBHm_Chr4g0442441
rosa_laevigata	RLG00000005711 RLG00000008159 RLG00000021676
rosa_multiflora	Rmu_co8251943.1_g000001 Rmu_co8341625.1_g000001 Rmu_sc0000733.1_g000008 Rmu_sc0001063.1_g000003 Rmu_sc0002735.1_g000014 Rmu_sc0005196.1_g000006 Rmu_sc0005344.1_g000007 Rmu_sc0032860.1_g000001
rosa_roxburghii	Rroxscaffold_2G00084040 Rroxscaffold_2G00084460 Rroxscaffold_4G00318360 Rroxscaffold_5G00358180
rosa_rugosa	Rorug01G0098500 Rorug01G0098600 Rorug01G0098700 Rorug01G0098800 Rorug01G0098900 Rorug02G0526100 Rorug04G0126800
rosa_samantha	Rh1AG122600 Rh1BG093900 Rh1CG117200 Rh1DG128200 Rh2AG593100 Rh2BG604400 Rh2CG575300 Rh2DG616000 Rh4AG184800 Rh4BG184300 Rh4CG197700 Rh4DG181400 Rh4DG182000
rosa_wichuraiana	Rw1G010000 Rw2G049370 Rw4G015810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	277
AatII	GACGTC	1 cut(s)	141
Acc36I	ACCTGC	1 cut(s)	277
AccB1I	GGYRCC	2 cut(s)	191, 206
AccI	GTMKAC	2 cut(s)	335, 587
AccII	CGCG	2 cut(s)	74, 275
AciI	CCGC	2 cut(s)	189, 210
AclWI	GGATC	4 cut(s)	557, 570, 768, 1307
AcoI	YGGCCR	2 cut(s)	46, 1658
AcsI	RAATTY	1 cut(s)	320
AcuI	CTGAAG	5 cut(s)	659, 781, 785, 1245, 1818
AcyI	GRCGYC	2 cut(s)	138, 338
AdeI	CACNNNGTG	2 cut(s)	952, 1625
AfaI	GTAC	4 cut(s)	83, 203, 269, 1674
AfiI	CCNNNNNNNGG	5 cut(s)	16, 44, 104, 163, 485
AgsI	TTSAA	6 cut(s)	304, 707, 849, 1030, 1112, 1714
AjiI	CACGTC	1 cut(s)	474
AjnI	CCWGG	1 cut(s)	755
AjuI	GAANNNNNNNTTGG	2 cut(s)	632, 664
Alw26I	GTCTC	3 cut(s)	164, 212, 1601
AlwI	GGATC	4 cut(s)	557, 570, 768, 1307
Ama87I	CYCGRG	1 cut(s)	1145
AoxI	GGCC	6 cut(s)	22, 46, 1142, 1371, 1658, 1770
ApeKI	GCWGC	8 cut(s)	76, 120, 379, 415, 418, 1491, 1588, 1819
ApoI	RAATTY	1 cut(s)	320
AseI	ATTAAT	2 cut(s)	663, 1725
Asp700I	GAANNNNTTC	1 cut(s)	1048
AspLEI	GCGC	3 cut(s)	74, 76, 832
AspS9I	GGNCC	2 cut(s)	22, 1143
AsuC2I	CCSGG	2 cut(s)	45, 164
AsuHPI	GGTGA	4 cut(s)	58, 745, 995, 1649
AvaI	CYCGRG	1 cut(s)	1145
BaeGI	GKGCMC	1 cut(s)	479
BamHI	GGATCC	1 cut(s)	562
BanI	GGYRCC	2 cut(s)	191, 206
BauI	CACGAG	1 cut(s)	461
BbsI	GAAGAC	3 cut(s)	133, 1010, 1485
BbvI	GCAGC	8 cut(s)	63, 107, 366, 427, 430, 1478, 1600, 1831
BccI	CCATC	3 cut(s)	47, 1313, 1570
BceAI	ACGGC	5 cut(s)	64, 141, 220, 1673, 1690
BcgI	CGANNNNNNTGC	4 cut(s)	97, 131, 1436, 1470
BciT130I	CCWGG	1 cut(s)	757
BciVI	GTATCC	2 cut(s)	161, 1150
BcnI	CCSGG	2 cut(s)	45, 164
BcoDI	GTCTC	3 cut(s)	164, 212, 1601
BfaI	CTAG	4 cut(s)	1409, 1425, 1523, 1677
BfmI	CTRYAG	1 cut(s)	1512
BfuAI	ACCTGC	1 cut(s)	277
BfuI	GTATCC	2 cut(s)	161, 1150
BglII	AGATCT	1 cut(s)	255
BisI	GCNGC	9 cut(s)	77, 121, 190, 380, 416, 419, 1492, 1589, 1820
BlpI	GCTNAGC	1 cut(s)	1815
BlsI	GCNGC	9 cut(s)	78, 122, 191, 381, 417, 420, 1493, 1590, 1821
Bme1390I	CCNGG	3 cut(s)	45, 164, 757
BmeT110I	CYCGRG	1 cut(s)	1145
BmgBI	CACGTC	1 cut(s)	474
BmgT120I	GGNCC	2 cut(s)	22, 1143
BmiI	GGNNCC	5 cut(s)	193, 208, 564, 692, 777
BmrFI	CCNGG	3 cut(s)	45, 164, 757
BmsI	GCATC	5 cut(s)	817, 1075, 1282, 1291, 1537
BpiI	GAAGAC	3 cut(s)	133, 1010, 1485
BpmI	CTGGAG	2 cut(s)	404, 852
Bpu1102I	GCTNAGC	1 cut(s)	1815
BpuEI	CTTGAG	3 cut(s)	14, 1281, 1808
BpuMI	CCSGG	2 cut(s)	45, 164
BsaAI	YACGTR	1 cut(s)	1170
BsaHI	GRCGYC	2 cut(s)	138, 338
BsaI	GGTCTC	1 cut(s)	212
BsaJI	CCNNGG	9 cut(s)	43, 163, 228, 249, 593, 756, 1146, 1374, 1661
BsaXI	ACNNNNNCTCC	6 cut(s)	224, 254, 458, 488, 869, 899
Bsc4I	CCNNNNNNNGG	5 cut(s)	16, 44, 104, 163, 485
Bse1I	ACTGG	2 cut(s)	779, 985
Bse3DI	GCAATG	1 cut(s)	1419
BseBI	CCWGG	1 cut(s)	757
BseDI	CCNNGG	9 cut(s)	43, 163, 228, 249, 593, 756, 1146, 1374, 1661
BseGI	GGATG	2 cut(s)	39, 907
BseLI	CCNNNNNNNGG	5 cut(s)	16, 44, 104, 163, 485
BseMI	GCAATG	1 cut(s)	1419
BseMII	CTCAG	6 cut(s)	142, 393, 739, 1326, 1596, 1806
BseNI	ACTGG	2 cut(s)	779, 985
BsePI	GCGCGC	1 cut(s)	72
BseRI	GAGGAG	3 cut(s)	17, 32, 525
BseSI	GKGCMC	1 cut(s)	479
BseXI	GCAGC	8 cut(s)	63, 107, 366, 427, 430, 1478, 1600, 1831
Bsh1236I	CGCG	2 cut(s)	74, 275
BshFI	GGCC	6 cut(s)	24, 48, 1144, 1373, 1660, 1772
BshNI	GGYRCC	2 cut(s)	191, 206
BsiHKCI	CYCGRG	1 cut(s)	1145
BsiSI	CCGG	3 cut(s)	45, 163, 341
BsiWI	CGTACG	1 cut(s)	81
BslFI	GGGAC	2 cut(s)	80, 484
BslI	CCNNNNNNNGG	5 cut(s)	16, 44, 104, 163, 485
BsmAI	GTCTC	3 cut(s)	164, 212, 1601
BsmBI	CGTCTC	2 cut(s)	164, 1601
BsmFI	GGGAC	2 cut(s)	80, 484
BsmI	GAATGC	2 cut(s)	703, 1441
BsnI	GGCC	6 cut(s)	24, 48, 1144, 1373, 1660, 1772
Bso31I	GGTCTC	1 cut(s)	212
BsoBI	CYCGRG	1 cut(s)	1145
Bsp1286I	GDGCHC	1 cut(s)	479
Bsp143I	GATC	5 cut(s)	255, 514, 562, 760, 1312
Bsp1720I	GCTNAGC	1 cut(s)	1815
Bsp19I	CCATGG	3 cut(s)	228, 1374, 1661
BspACI	CCGC	2 cut(s)	189, 210
BspANI	GGCC	6 cut(s)	24, 48, 1144, 1373, 1660, 1772
BspCNI	CTCAG	6 cut(s)	141, 394, 738, 1327, 1597, 1807
BspFNI	CGCG	2 cut(s)	74, 275
BspLI	GGNNCC	5 cut(s)	193, 208, 564, 692, 777
BspMAI	CTGCAG	1 cut(s)	1516
BspMI	ACCTGC	1 cut(s)	277
BspPI	GGATC	4 cut(s)	557, 570, 768, 1307
BspT107I	GGYRCC	2 cut(s)	191, 206
BspTNI	GGTCTC	1 cut(s)	212
BsrDI	GCAATG	1 cut(s)	1419
BsrI	ACTGG	2 cut(s)	779, 985
BssECI	CCNNGG	9 cut(s)	43, 163, 228, 249, 593, 756, 1146, 1374, 1661
BssHII	GCGCGC	1 cut(s)	72
BssMI	GATC	5 cut(s)	255, 514, 562, 760, 1312
BssNI	GRCGYC	2 cut(s)	138, 338
BssSI	CACGAG	1 cut(s)	461
BssT1I	CCWWGG	4 cut(s)	228, 249, 1374, 1661
Bst2BI	CACGAG	1 cut(s)	461
Bst2UI	CCWGG	1 cut(s)	757
Bst4CI	ACNGT	6 cut(s)	428, 444, 530, 747, 952, 1199
Bst6I	CTCTTC	1 cut(s)	648
BstACI	GRCGYC	2 cut(s)	138, 338
BstAPI	GCANNNNNTGC	1 cut(s)	716
BstBAI	YACGTR	1 cut(s)	1170
BstC8I	GCNNGC	4 cut(s)	74, 148, 1185, 1540
BstDEI	CTNAG	7 cut(s)	128, 402, 725, 1335, 1605, 1745, 1815
BstDSI	CCRYGG	4 cut(s)	228, 593, 1374, 1661
BstENI	CCTNNNNNAGG	1 cut(s)	14
BstF5I	GGATG	2 cut(s)	39, 907
BstFNI	CGCG	2 cut(s)	74, 275
BstHHI	GCGC	3 cut(s)	74, 76, 832
BstKTI	GATC	5 cut(s)	258, 517, 565, 763, 1315
BstMAI	GTCTC	3 cut(s)	164, 212, 1601
BstMBI	GATC	5 cut(s)	255, 514, 562, 760, 1312
BstMWI	GCNNNNNNNGC	5 cut(s)	707, 716, 1189, 1301, 1597
BstNI	CCWGG	1 cut(s)	757
BstSCI	CCNGG	3 cut(s)	43, 162, 755
BstSFI	CTRYAG	1 cut(s)	1512
BstSLI	GKGCMC	1 cut(s)	479
BstUI	CGCG	2 cut(s)	74, 275
BstV1I	GCAGC	8 cut(s)	63, 107, 366, 427, 430, 1478, 1600, 1831
BstV2I	GAAGAC	3 cut(s)	133, 1010, 1485
BstX2I	RGATCY	3 cut(s)	255, 562, 760
BstXI	CCANNNNNNTGG	1 cut(s)	229
BstYI	RGATCY	3 cut(s)	255, 562, 760
BsuI	GTATCC	2 cut(s)	161, 1150
BsuRI	GGCC	6 cut(s)	24, 48, 1144, 1373, 1660, 1772
BtgI	CCRYGG	4 cut(s)	228, 593, 1374, 1661
BtrI	CACGTC	1 cut(s)	474
BtsCI	GGATG	2 cut(s)	39, 907
BtsI	GCAGTG	2 cut(s)	1521, 1809
BtsIMutI	CAGTG	7 cut(s)	136, 524, 681, 957, 1204, 1521, 1809
BveI	ACCTGC	1 cut(s)	277
Cac8I	GCNNGC	4 cut(s)	74, 148, 1185, 1540
CfoI	GCGC	3 cut(s)	74, 76, 832
Cfr13I	GGNCC	2 cut(s)	22, 1143
CseI	GACGC	2 cut(s)	346, 1618
Csp6I	GTAC	4 cut(s)	82, 202, 268, 1673
CspCI	CAANNNNNGTGG	2 cut(s)	955, 990
CviAII	CATG	5 cut(s)	229, 788, 1375, 1558, 1662
CviQI	GTAC	4 cut(s)	82, 202, 268, 1673
DdeI	CTNAG	7 cut(s)	128, 402, 725, 1335, 1605, 1745, 1815
DpnI	GATC	5 cut(s)	257, 516, 564, 762, 1314
DpnII	GATC	5 cut(s)	255, 514, 562, 760, 1312
DraI	TTTAAA	1 cut(s)	543
DraIII	CACNNNGTG	2 cut(s)	952, 1625
EaeI	YGGCCR	2 cut(s)	46, 1658
Eam1104I	CTCTTC	1 cut(s)	648
EarI	CTCTTC	1 cut(s)	648
Eco130I	CCWWGG	4 cut(s)	228, 249, 1374, 1661
Eco31I	GGTCTC	1 cut(s)	212
Eco57I	CTGAAG	5 cut(s)	659, 781, 785, 1245, 1818
Eco88I	CYCGRG	1 cut(s)	1145
EcoNI	CCTNNNNNAGG	1 cut(s)	14
EcoO109I	RGGNCCY	1 cut(s)	22
EcoRII	CCWGG	1 cut(s)	755
EcoT14I	CCWWGG	4 cut(s)	228, 249, 1374, 1661
EcoT22I	ATGCAT	1 cut(s)	1441
ErhI	CCWWGG	4 cut(s)	228, 249, 1374, 1661
Esp3I	CGTCTC	2 cut(s)	164, 1601
FaeI	CATG	5 cut(s)	232, 791, 1378, 1561, 1665
FaqI	GGGAC	2 cut(s)	80, 484
FatI	CATG	5 cut(s)	228, 787, 1374, 1557, 1661
FblI	GTMKAC	2 cut(s)	335, 587
Fnu4HI	GCNGC	9 cut(s)	77, 121, 190, 380, 416, 419, 1492, 1589, 1820
FokI	GGATG	2 cut(s)	26, 914
Fsp4HI	GCNGC	9 cut(s)	77, 121, 190, 380, 416, 419, 1492, 1589, 1820
FspBI	CTAG	4 cut(s)	1409, 1425, 1523, 1677
GlaI	GCGC	3 cut(s)	73, 75, 831
GluI	GCNGC	9 cut(s)	77, 121, 190, 380, 416, 419, 1492, 1589, 1820
GsuI	CTGGAG	2 cut(s)	404, 852
HaeIII	GGCC	6 cut(s)	24, 48, 1144, 1373, 1660, 1772
HapII	CCGG	3 cut(s)	45, 163, 341
HgaI	GACGC	2 cut(s)	346, 1618
HhaI	GCGC	3 cut(s)	74, 76, 832
Hin1I	GRCGYC	2 cut(s)	138, 338
Hin1II	CATG	5 cut(s)	232, 791, 1378, 1561, 1665
Hin6I	GCGC	3 cut(s)	72, 74, 830
HinP1I	GCGC	3 cut(s)	72, 74, 830
HincII	GTYRAC	3 cut(s)	88, 336, 588
HindII	GTYRAC	3 cut(s)	88, 336, 588
HindIII	AAGCTT	2 cut(s)	536, 1466
HinfI	GANTC	7 cut(s)	277, 589, 598, 892, 1277, 1401, 1739
HpaII	CCGG	3 cut(s)	45, 163, 341
HphI	GGTGA	4 cut(s)	58, 745, 995, 1649
Hpy166II	GTNNAC	3 cut(s)	88, 336, 588
Hpy188I	TCNGA	5 cut(s)	403, 728, 765, 1156, 1312
Hpy188III	TCNNGA	8 cut(s)	602, 623, 869, 896, 1289, 1298, 1462, 1825
Hpy8I	GTNNAC	3 cut(s)	88, 336, 588
Hpy99I	CGWCG	3 cut(s)	140, 337, 340
HpyAV	CCTTC	6 cut(s)	634, 972, 1269, 1375, 1424, 1564
HpyCH4III	ACNGT	6 cut(s)	428, 444, 530, 747, 952, 1199
HpyCH4IV	ACGT	7 cut(s)	57, 84, 93, 138, 332, 473, 1169
HpyCH4V	TGCA	9 cut(s)	415, 438, 506, 573, 1183, 1439, 1447, 1514, 1528
HpyF10VI	GCNNNNNNNGC	5 cut(s)	707, 716, 1189, 1301, 1597
HpyF3I	CTNAG	7 cut(s)	128, 402, 725, 1335, 1605, 1745, 1815
HpySE526I	ACGT	7 cut(s)	57, 84, 93, 138, 332, 473, 1169
Hsp92I	GRCGYC	2 cut(s)	138, 338
Hsp92II	CATG	5 cut(s)	232, 791, 1378, 1561, 1665
HspAI	GCGC	3 cut(s)	72, 74, 830
Kzo9I	GATC	5 cut(s)	255, 514, 562, 760, 1312
LmnI	GCTCC	5 cut(s)	39, 343, 690, 1357, 1499
Lsp1109I	GCAGC	8 cut(s)	63, 107, 366, 427, 430, 1478, 1600, 1831
LweI	GCATC	5 cut(s)	817, 1075, 1282, 1291, 1537
MaeI	CTAG	4 cut(s)	1409, 1425, 1523, 1677
MaeII	ACGT	7 cut(s)	57, 84, 93, 138, 332, 473, 1169
MaeIII	GTNAC	2 cut(s)	1015, 1682
MalI	GATC	5 cut(s)	257, 516, 564, 762, 1314
MboI	GATC	5 cut(s)	255, 514, 562, 760, 1312
MboII	GAAGA	8 cut(s)	133, 665, 901, 1015, 1490, 1523, 1762, 1802
MflI	RGATCY	3 cut(s)	255, 562, 760
MhlI	GDGCHC	1 cut(s)	479
MlyI	GAGTC	3 cut(s)	583, 1271, 1395
MmeI	TCCRAC	2 cut(s)	630, 1134
Mph1103I	ATGCAT	1 cut(s)	1441
MroXI	GAANNNNTTC	1 cut(s)	1048
MslI	CAYNNNNRTG	2 cut(s)	953, 1502
MspI	CCGG	3 cut(s)	45, 163, 341
MspR9I	CCNGG	3 cut(s)	45, 164, 757
Mva1269I	GAATGC	2 cut(s)	703, 1441
MvaI	CCWGG	1 cut(s)	757
MvnI	CGCG	2 cut(s)	74, 275
MwoI	GCNNNNNNNGC	5 cut(s)	707, 716, 1189, 1301, 1597
NciI	CCSGG	2 cut(s)	45, 164
NcoI	CCATGG	3 cut(s)	228, 1374, 1661
NdeII	GATC	5 cut(s)	255, 514, 562, 760, 1312
NlaIII	CATG	5 cut(s)	232, 791, 1378, 1561, 1665
NlaIV	GGNNCC	5 cut(s)	193, 208, 564, 692, 777
NmeAIII	GCCGAG	1 cut(s)	84
NmuCI	GTSAC	1 cut(s)	1682
NsiI	ATGCAT	1 cut(s)	1441
PaqCI	CACCTGC	1 cut(s)	277
PauI	GCGCGC	1 cut(s)	72
PcsI	WCGNNNNNNNCGW	2 cut(s)	90, 154
PctI	GAATGC	2 cut(s)	703, 1441
PdmI	GAANNNNTTC	1 cut(s)	1048
PfeI	GAWTC	4 cut(s)	277, 598, 892, 1739
Pfl23II	CGTACG	1 cut(s)	81
PkrI	GCNGC	9 cut(s)	78, 122, 191, 381, 417, 420, 1493, 1590, 1821
PleI	GAGTC	3 cut(s)	583, 1271, 1395
PpsI	GAGTC	3 cut(s)	583, 1271, 1395
Ppu21I	YACGTR	1 cut(s)	1170
PshBI	ATTAAT	2 cut(s)	663, 1725
Psp6I	CCWGG	1 cut(s)	755
PspGI	CCWGG	1 cut(s)	755
PspLI	CGTACG	1 cut(s)	81
PspN4I	GGNNCC	5 cut(s)	193, 208, 564, 692, 777
PspPI	GGNCC	2 cut(s)	22, 1143
PsrI	GAACNNNNNNTAC	2 cut(s)	284, 316
PstI	CTGCAG	1 cut(s)	1516
PsuI	RGATCY	3 cut(s)	255, 562, 760
PteI	GCGCGC	1 cut(s)	72
RsaI	GTAC	4 cut(s)	83, 203, 269, 1674
RsaNI	GTAC	4 cut(s)	82, 202, 268, 1673
RseI	CAYNNNNRTG	2 cut(s)	953, 1502
SalI	GTCGAC	2 cut(s)	334, 586
SatI	GCNGC	9 cut(s)	77, 121, 190, 380, 416, 419, 1492, 1589, 1820
Sau3AI	GATC	5 cut(s)	255, 514, 562, 760, 1312
Sau96I	GGNCC	2 cut(s)	22, 1143
SchI	GAGTC	3 cut(s)	583, 1271, 1395
ScrFI	CCNGG	3 cut(s)	45, 164, 757
SduI	GDGCHC	1 cut(s)	479
SfaNI	GCATC	5 cut(s)	817, 1075, 1282, 1291, 1537
SfcI	CTRYAG	1 cut(s)	1512
SgrDI	CGTCGACG	1 cut(s)	334
SmiMI	CAYNNNNRTG	2 cut(s)	953, 1502
SmlI	CTYRAG	4 cut(s)	11, 29, 1296, 1823
SmoI	CTYRAG	4 cut(s)	11, 29, 1296, 1823
SsiI	CCGC	2 cut(s)	189, 210
SspMI	CTAG	4 cut(s)	1409, 1425, 1523, 1677
StyD4I	CCNGG	3 cut(s)	43, 162, 755
StyI	CCWWGG	4 cut(s)	228, 249, 1374, 1661
TaaI	ACNGT	6 cut(s)	428, 444, 530, 747, 952, 1199
TaiI	ACGT	7 cut(s)	60, 87, 96, 141, 335, 476, 1172
TaqI	TCGA	2 cut(s)	335, 587
TauI	GCSGC	1 cut(s)	192
TfiI	GAWTC	4 cut(s)	277, 598, 892, 1739
TscAI	CASTG	7 cut(s)	136, 524, 681, 957, 1204, 1521, 1809
TseFI	GTSAC	1 cut(s)	1682
TseI	GCWGC	8 cut(s)	76, 120, 379, 415, 418, 1491, 1588, 1819
Tsp45I	GTSAC	1 cut(s)	1682
TspDTI	ATGAA	6 cut(s)	269, 1016, 1050, 1216, 1546, 1746
TspGWI	ACGGA	2 cut(s)	365, 610
TspRI	CASTG	7 cut(s)	136, 524, 681, 957, 1204, 1521, 1809
VspI	ATTAAT	2 cut(s)	663, 1725
XagI	CCTNNNNNAGG	1 cut(s)	14
XapI	RAATTY	1 cut(s)	320
XmiI	GTMKAC	2 cut(s)	335, 587
XmnI	GAANNNNTTC	1 cut(s)	1048
XspI	CTAG	4 cut(s)	1409, 1425, 1523, 1677
ZraI	GACGTC	1 cut(s)	139
Zsp2I	ATGCAT	1 cut(s)	1441

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.