pycom04g01040

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
940545 .. 947191
6647 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g01040.10

Sequence Viewer

Length: 2406 bp
ATGGGAGACCTCACAGCTACCTCCAAGGGGGACCAGAAGGTTGCCAAGCTACCCATCCCTGGCAAGCGAAACATCCTTATCACAAGTGCCTTGCCTTATGTCAATAATGTCCCTCATCTCGGCAATATCATCGGCTGTGTATTGAGTGCTGATGTCTACGCACGCTACTGCCGTCTCCGGGGATACAATACCTTATACATATGTGGAACTGATGAGTACGGCACGGCAACGGAGACCAAAGCTTTGGAAGAGAAGTGTAGCCCCCAAGAAATCTGTGACAAATATCATGCAATTCATAGGGACGTTTATGAATGGTTTAACATAAGCTTTGATAAATTTGGGCGTACATCGTCACCACAGCAAACAGAAGTATGCCAAGCTATTTTTAAGAAACTGTTGGAGAATGATTGGCTCACAGAGAACACAATGCAGCAGCTTTACTGTGACACATGCGAACGGTTCTTAGCGGACAGGCTTGTGGAGGGGACATGCCCGACTCAAGGCTGTGGCTATGCTTCTGCACGAGGAGATCAATGTGAGAACTGTGGAAAGCTTTTGAATCCAACAGAACTAAAAGATCCTAAGTGCAAGGTTTGTAAGTCAACTCCACGAATTCGAGATACAAACCACTTGTTTCTGGAACTACCTCTGCTGAAGGATAAGTTGGAACAATATATCAATGAAATGTCAGTGGCTGGGTCATGGAGCCAGAATGCCATTCAAGCGACCAATGCATGGCTCAAAGAGGGGCTCAGGCAGCGGTGTATTACCAGGGATTTGAAGTGGGGTGTTCCGGTTCCTCATGATAACTTCAGGGACAAGGTTTTCTACGTGTGGTTTGATGCTCCAATTGGATATGTCTCCATTACTAAATGTTACACTGATGATTGGGAAAAATGGTGGAAGAATCCTGAAAATGTGGAGCTGTATCAGTTTATGGGCAAGGATAATGTGCCATTCCACACAGTGATGTTTCCTTCCACTCTTCTTGGAACTGGTGAAAATTGGACTTTGATGAAGACTATCAGTGTAACAGAGTACTTAAATTATGAAGCAGGAAAGTTTTCTAAGAGTAAAGGCATAGGGGTTTTTGGAAATAATGCAAAAGATACAAACATTCCTGTTGAAGTATGGAGATACTACTTGCTAACTAATAGGCCTGAGGTATCAGACACATTATTTACATGGGCGGACTTGCAAGCAAAACTGAACAGTGAATTGCTGAATAATTTGGGCAACTTCATAAATCGAGTTTTGAGTTTTGTTGCTAAACCTTCAGGTCAAGGATATGGTTCCATTATTCCAGATGCTCCGCAAGCAGAAGCAGATCCTTTGACAGAGAAACTGGCTGAAAAAGTTGGTAAATATGTGGAGCAATATATAGAAGCTATGGAGAAGGTTAAGCTAAAGCAAGGACTCAAAACAGCGATGGCCATTTCTAGTGAAGGGAACGCATATCTGCAAGAAAGTCAGTTCTGGAAGCTGTACAAAGAGGACCAACCTCGTTGCGCTATTGTTATGAGAACCTCAGTCGGACTAGTGCATCTTCTTGCTTGTTTGTTGGAACCTTTTATGCCATCATTTTCTCTCGAAGTATTCAAGCAACTTAATTTGCCTTCTGAGACACACTTATCACTTTGTGATGATGAGGGAGATATTGATAGGGCTAGACGGCCTTGGGAGATTGTGCCTATTGGTCACAAGATTGGGAAACCAGAGCCATTGTTCAAGGAATTGAAAGATGAAGAAGTAGAATTCTGGAGGCAGAAGTTTGCTGGAAGTCAAGCTGACAGAAAAGAGAGGGAAGAAGCTGAAGCAGCAAAGGTGGCTGCACAACTCAAAAAAACGAAAGTTTCAGAAGGTACTGGAAAGAAAAAGCAACAGCCCACAAAATCTGCAGCTGACGCAGAGATTTCTATTAGTAGGCTTGATATCCGCGTTGGTCTCATTACTAAAGCTCAGAAGCATCCTGATGCGGATTCACTGTACGTAGAGGATATTGATGTTGGTGAAGGACAAACCAGAACAGTGGTCAGTGGACTTGTCAAATATATACCTCTTGAAAAAATGCAGAACCGGAAAGTATGTGTTCTTTGCAATCTGAAGCCAGCAAACATGCGGGGTATTAAGTCAGAAGCAATGGTTCTTGCTGCTTCGAACAGTGAACACACCACAGTTGAACTGGTTGAACCGCCGGAAGGTGCACAAGTTGGCGAGAGAGTTACATTTCCCGGGTTTGTAGGTGAGCCTGATGAGATTTTGAACCCAAAGAAGAAGGTGTGGGAGACCTTGCAGGTGGATCTGCACACGAACACTGAACTAGTGGCGTGCTACAAAGATATTCCGCTCACAACATCAGCCGGTGTTTGCACCGTGTCCTCTATTGCCGGTGGGTCAATTAAGTAG

Protein Analysis

802

Amino Acids

90.08

Weight (kDa)

6.08

Isoelectric Point (pI)

27.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2284
Acc36I ACCTGC 1 cut(s) 2284
AccB7I CCANNNNNTGG 1 cut(s) 735
AccBSI CCGCTC 1 cut(s) 2347
AccI GTMKAC 1 cut(s) 156
AccII CGCG 1 cut(s) 1938
AciI CCGC 9 cut(s) 467, 760, 1190, 1313, 1936, 1976, 2119, 2192, 2345
AclWI GGATC 3 cut(s) 572, 1322, 2307
AcoI YGGCCR 1 cut(s) 1431
AcsI RAATTY 3 cut(s) 335, 612, 1754
AcuI CTGAAG 5 cut(s) 674, 796, 1260, 1833, 2123
AdeI CACNNNGTG 2 cut(s) 967, 1640
AfaI GTAC 6 cut(s) 218, 346, 1040, 1487, 1864, 1988
AfiI CCNNNNNNNGG 7 cut(s) 27, 59, 119, 178, 500, 735, 2198
AflIII ACRYGT 1 cut(s) 831
AhlI ACTAGT 2 cut(s) 1537, 2320
AjnI CCWGG 2 cut(s) 58, 770
AjuI GAANNNNNNNTTGG 2 cut(s) 647, 679
Alw21I GWGCWC 1 cut(s) 2206
Alw26I GTCTC 6 cut(s) 179, 227, 865, 1616, 1949, 2279
Alw44I GTGCAC 1 cut(s) 2202
AlwI GGATC 3 cut(s) 572, 1322, 2307
AlwNI CAGNNNCTG 1 cut(s) 695
Ama87I CYCGRG 1 cut(s) 2231
AoxI GGCC 3 cut(s) 1157, 1431, 1673
ApaLI GTGCAC 1 cut(s) 2202
ApeKI GCWGC 7 cut(s) 430, 433, 757, 1817, 1829, 1898, 2150
ApoI RAATTY 3 cut(s) 335, 612, 1754
ArsI GACNNNNNNTTYG 2 cut(s) 226, 258
Asp700I GAANNNNTTC 1 cut(s) 1063
AspLEI GCGC 1 cut(s) 1511
AspS9I GGNCC 2 cut(s) 31, 1495
AsuC2I CCSGG 3 cut(s) 179, 2232, 2233
AsuHPI GGTGA 4 cut(s) 345, 1010, 2021, 2255
AsuII TTCGAA 1 cut(s) 2156
AvaI CYCGRG 1 cut(s) 2231
AvaII GGWCC 2 cut(s) 31, 1495
AxyI CCTNAGG 1 cut(s) 1161
BaeGI GKGCMC 1 cut(s) 2206
BalI TGGCCA 1 cut(s) 1433
BanII GRGCYC 1 cut(s) 753
BauI CACGAG 1 cut(s) 522
BbsI GAAGAC 1 cut(s) 1025
Bbv12I GWGCWC 1 cut(s) 2206
BbvI GCAGC 7 cut(s) 442, 445, 769, 1816, 1829, 1910, 2137
BccI CCATC 3 cut(s) 62, 1423, 1585
BceAI ACGGC 4 cut(s) 156, 235, 240, 1688
BcgI CGANNNNNNTGC 2 cut(s) 112, 146
BciT130I CCWGG 2 cut(s) 60, 772
BciVI GTATCC 1 cut(s) 176
BcnI CCSGG 3 cut(s) 179, 2232, 2233
BcoDI GTCTC 6 cut(s) 179, 227, 865, 1616, 1949, 2279
BcuI ACTAGT 2 cut(s) 1537, 2320
BfaI CTAG 4 cut(s) 1440, 1538, 1668, 2321
BfmI CTRYAG 1 cut(s) 1896
BfuAI ACCTGC 1 cut(s) 2284
BfuI GTATCC 1 cut(s) 176
BisI GCNGC 7 cut(s) 431, 434, 758, 1818, 1830, 1899, 2151
BlsI GCNGC 7 cut(s) 432, 435, 759, 1819, 1831, 1900, 2152
BmcAI AGTACT 1 cut(s) 1040
Bme1390I CCNGG 5 cut(s) 60, 179, 772, 2232, 2233
Bme18I GGWCC 2 cut(s) 31, 1495
BmeT110I CYCGRG 1 cut(s) 2231
BmgT120I GGNCC 2 cut(s) 31, 1495
BmiI GGNNCC 5 cut(s) 32, 707, 798, 1294, 1566
BmrFI CCNGG 5 cut(s) 60, 179, 772, 2232, 2233
BmsI GCATC 5 cut(s) 832, 1297, 1552, 1963, 1975
BpiI GAAGAC 1 cut(s) 1025
BpmI CTGGAG 1 cut(s) 1780
Bpu10I CCTNAGC 1 cut(s) 752
Bpu14I TTCGAA 1 cut(s) 2156
BpuEI CTTGAG 1 cut(s) 483
BpuMI CCSGG 3 cut(s) 179, 2232, 2233
BsaAI YACGTR 2 cut(s) 832, 1990
BsaI GGTCTC 3 cut(s) 227, 1949, 2279
BsaJI CCNNGG 6 cut(s) 24, 58, 178, 771, 1676, 2231
BsaWI WCCGGW 2 cut(s) 793, 2076
Bsc4I CCNNNNNNNGG 7 cut(s) 27, 59, 119, 178, 500, 735, 2198
Bse118I RCCGGY 2 cut(s) 2360, 2387
Bse1I ACTGG 4 cut(s) 1000, 1350, 1870, 2187
Bse21I CCTNAGG 1 cut(s) 1161
Bse3DI GCAATG 1 cut(s) 2145
BseBI CCWGG 2 cut(s) 60, 772
BseDI CCNNGG 6 cut(s) 24, 58, 178, 771, 1676, 2231
BseGI GGATG 3 cut(s) 54, 72, 1966
BseLI CCNNNNNNNGG 7 cut(s) 27, 59, 119, 178, 500, 735, 2198
BseMI GCAATG 1 cut(s) 2145
BseMII CTCAG 5 cut(s) 766, 1152, 1542, 1611, 1973
BseNI ACTGG 4 cut(s) 1000, 1350, 1870, 2187
BseRI GAGGAG 1 cut(s) 540
BseSI GKGCMC 1 cut(s) 2206
BseXI GCAGC 7 cut(s) 442, 445, 769, 1816, 1829, 1910, 2137
BseYI CCCAGC 1 cut(s) 695
BsgI GTGCAG 3 cut(s) 504, 1815, 2288
Bsh1236I CGCG 1 cut(s) 1938
BshFI GGCC 3 cut(s) 1159, 1433, 1675
BsiHKAI GWGCWC 1 cut(s) 2206
BsiHKCI CYCGRG 1 cut(s) 2231
BsiSI CCGG 7 cut(s) 178, 794, 2077, 2195, 2232, 2361, 2388
BslFI GGGAC 5 cut(s) 44, 95, 314, 499, 830
BslI CCNNNNNNNGG 7 cut(s) 27, 59, 119, 178, 500, 735, 2198
BsmAI GTCTC 6 cut(s) 179, 227, 865, 1616, 1949, 2279
BsmBI CGTCTC 1 cut(s) 179
BsmFI GGGAC 5 cut(s) 44, 95, 314, 499, 830
BsmI GAATGC 1 cut(s) 718
BsnI GGCC 3 cut(s) 1159, 1433, 1675
Bso31I GGTCTC 3 cut(s) 227, 1949, 2279
BsoBI CYCGRG 1 cut(s) 2231
Bsp119I TTCGAA 1 cut(s) 2156
Bsp1286I GDGCHC 2 cut(s) 753, 2206
Bsp1407I TGTACA 1 cut(s) 1485
Bsp143I GATC 4 cut(s) 529, 577, 1327, 2299
BspACI CCGC 9 cut(s) 467, 760, 1190, 1313, 1936, 1976, 2119, 2192, 2345
BspANI GGCC 3 cut(s) 1159, 1433, 1675
BspCNI CTCAG 5 cut(s) 765, 1153, 1541, 1612, 1972
BspFNI CGCG 1 cut(s) 1938
BspHI TCATGA 1 cut(s) 802
BspLI GGNNCC 5 cut(s) 32, 707, 798, 1294, 1566
BspMAI CTGCAG 1 cut(s) 1900
BspMI ACCTGC 1 cut(s) 2284
BspPI GGATC 3 cut(s) 572, 1322, 2307
BspT104I TTCGAA 1 cut(s) 2156
BspTNI GGTCTC 3 cut(s) 227, 1949, 2279
BsrBI CCGCTC 1 cut(s) 2347
BsrDI GCAATG 1 cut(s) 2145
BsrFI RCCGGY 2 cut(s) 2360, 2387
BsrGI TGTACA 1 cut(s) 1485
BsrI ACTGG 4 cut(s) 1000, 1350, 1870, 2187
BssAI RCCGGY 2 cut(s) 2360, 2387
BssECI CCNNGG 6 cut(s) 24, 58, 178, 771, 1676, 2231
BssMI GATC 4 cut(s) 529, 577, 1327, 2299
BssSI CACGAG 1 cut(s) 522
BssT1I CCWWGG 2 cut(s) 24, 1676
Bst2BI CACGAG 1 cut(s) 522
Bst2UI CCWGG 2 cut(s) 60, 772
Bst6I CTCTTC 2 cut(s) 243, 990
BstAUI TGTACA 1 cut(s) 1485
BstBAI YACGTR 2 cut(s) 832, 1990
BstBI TTCGAA 1 cut(s) 2156
BstC8I GCNNGC 6 cut(s) 65, 163, 1200, 1317, 2109, 2329
BstDEI CTNAG 8 cut(s) 463, 582, 752, 1068, 1161, 1528, 1620, 1959
BstF5I GGATG 3 cut(s) 54, 72, 1966
BstFNI CGCG 1 cut(s) 1938
BstHHI GCGC 1 cut(s) 1511
BstKTI GATC 4 cut(s) 532, 580, 1330, 2302
BstMAI GTCTC 6 cut(s) 179, 227, 865, 1616, 1949, 2279
BstMBI GATC 4 cut(s) 529, 577, 1327, 2299
BstMWI GCNNNNNNNGC 7 cut(s) 722, 731, 757, 1316, 1817, 1826, 1904
BstNI CCWGG 2 cut(s) 60, 772
BstNSI RCATGY 3 cut(s) 453, 492, 2119
BstSCI CCNGG 5 cut(s) 58, 177, 770, 2230, 2231
BstSFI CTRYAG 1 cut(s) 1896
BstSLI GKGCMC 1 cut(s) 2206
BstSNI TACGTA 1 cut(s) 1990
BstUI CGCG 1 cut(s) 1938
BstV1I GCAGC 7 cut(s) 442, 445, 769, 1816, 1829, 1910, 2137
BstV2I GAAGAC 1 cut(s) 1025
BstX2I RGATCY 3 cut(s) 577, 1327, 2299
BstXI CCANNNNNNTGG 2 cut(s) 244, 2029
BstYI RGATCY 3 cut(s) 577, 1327, 2299
Bsu36I CCTNAGG 1 cut(s) 1161
BsuI GTATCC 1 cut(s) 176
BsuRI GGCC 3 cut(s) 1159, 1433, 1675
BtgZI GCGATG 1 cut(s) 1442
BtsCI GGATG 3 cut(s) 54, 72, 1966
BveI ACCTGC 1 cut(s) 2284
Cac8I GCNNGC 6 cut(s) 65, 163, 1200, 1317, 2109, 2329
CaiI CAGNNNCTG 1 cut(s) 695
CciI TCATGA 1 cut(s) 802
CfoI GCGC 1 cut(s) 1511
Cfr10I RCCGGY 2 cut(s) 2360, 2387
Cfr13I GGNCC 2 cut(s) 31, 1495
Cfr9I CCCGGG 1 cut(s) 2231
CseI GACGC 1 cut(s) 1913
Csp6I GTAC 6 cut(s) 217, 345, 1039, 1486, 1863, 1987
CspCI CAANNNNNGTGG 2 cut(s) 970, 1005
CviAII CATG 8 cut(s) 287, 450, 489, 702, 735, 803, 1185, 2116
CviQI GTAC 6 cut(s) 217, 345, 1039, 1486, 1863, 1987
DdeI CTNAG 8 cut(s) 463, 582, 752, 1068, 1161, 1528, 1620, 1959
DpnI GATC 4 cut(s) 531, 579, 1329, 2301
DpnII GATC 4 cut(s) 529, 577, 1327, 2299
DraIII CACNNNGTG 2 cut(s) 967, 1640
EaeI YGGCCR 1 cut(s) 1431
Eam1104I CTCTTC 2 cut(s) 243, 990
EarI CTCTTC 2 cut(s) 243, 990
EciI GGCGGA 1 cut(s) 1205
Eco105I TACGTA 1 cut(s) 1990
Eco130I CCWWGG 2 cut(s) 24, 1676
Eco147I AGGCCT 1 cut(s) 1159
Eco24I GRGCYC 1 cut(s) 753
Eco31I GGTCTC 3 cut(s) 227, 1949, 2279
Eco32I GATATC 1 cut(s) 1933
Eco47I GGWCC 2 cut(s) 31, 1495
Eco57I CTGAAG 5 cut(s) 674, 796, 1260, 1833, 2123
Eco81I CCTNAGG 1 cut(s) 1161
Eco88I CYCGRG 1 cut(s) 2231
EcoRI GAATTC 2 cut(s) 612, 1754
EcoRII CCWGG 2 cut(s) 58, 770
EcoRV GATATC 1 cut(s) 1933
EcoT14I CCWWGG 2 cut(s) 24, 1676
EcoT22I ATGCAT 1 cut(s) 736
EcoT38I GRGCYC 1 cut(s) 753
ErhI CCWWGG 2 cut(s) 24, 1676
Esp3I CGTCTC 1 cut(s) 179
FaeI CATG 8 cut(s) 290, 453, 492, 705, 738, 806, 1188, 2119
FaqI GGGAC 5 cut(s) 44, 95, 314, 499, 830
FatI CATG 8 cut(s) 286, 449, 488, 701, 734, 802, 1184, 2115
FauI CCCGC 1 cut(s) 2112
FauNDI CATATG 1 cut(s) 200
FblI GTMKAC 1 cut(s) 156
Fnu4HI GCNGC 7 cut(s) 431, 434, 758, 1818, 1830, 1899, 2151
FokI GGATG 3 cut(s) 41, 59, 1953
FriOI GRGCYC 1 cut(s) 753
Fsp4HI GCNGC 7 cut(s) 431, 434, 758, 1818, 1830, 1899, 2151
FspBI CTAG 4 cut(s) 1440, 1538, 1668, 2321
GlaI GCGC 1 cut(s) 1510
GluI GCNGC 7 cut(s) 431, 434, 758, 1818, 1830, 1899, 2151
GsaI CCCAGC 1 cut(s) 699
GsuI CTGGAG 1 cut(s) 1780
HaeIII GGCC 3 cut(s) 1159, 1433, 1675
HapII CCGG 7 cut(s) 178, 794, 2077, 2195, 2232, 2361, 2388
HgaI GACGC 1 cut(s) 1913
HhaI GCGC 1 cut(s) 1511
Hin1II CATG 8 cut(s) 290, 453, 492, 705, 738, 806, 1188, 2119
Hin6I GCGC 1 cut(s) 1509
HinP1I GCGC 1 cut(s) 1509
HincII GTYRAC 1 cut(s) 603
HindII GTYRAC 1 cut(s) 603
HindIII AAGCTT 3 cut(s) 240, 325, 551
HinfI GANTC 5 cut(s) 496, 559, 907, 1416, 1979
HpaII CCGG 7 cut(s) 178, 794, 2077, 2195, 2232, 2361, 2388
HphI GGTGA 4 cut(s) 345, 1010, 2021, 2255
Hpy166II GTNNAC 5 cut(s) 157, 603, 2039, 2165, 2204
Hpy188I TCNGA 7 cut(s) 1171, 1535, 1621, 1858, 1962, 2103, 2134
Hpy8I GTNNAC 5 cut(s) 157, 603, 2039, 2165, 2204
HpyCH4IV ACGT 3 cut(s) 303, 831, 1989
HpyF10VI GCNNNNNNNGC 7 cut(s) 722, 731, 757, 1316, 1817, 1826, 1904
HpyF3I CTNAG 8 cut(s) 463, 582, 752, 1068, 1161, 1528, 1620, 1959
HpySE526I ACGT 3 cut(s) 303, 831, 1989
Hsp92II CATG 8 cut(s) 290, 453, 492, 705, 738, 806, 1188, 2119
HspAI GCGC 1 cut(s) 1509
Kzo9I GATC 4 cut(s) 529, 577, 1327, 2299
LmnI GCTCC 5 cut(s) 705, 850, 922, 1315, 1372
Lsp1109I GCAGC 7 cut(s) 442, 445, 769, 1816, 1829, 1910, 2137
LweI GCATC 5 cut(s) 832, 1297, 1552, 1963, 1975
MaeI CTAG 4 cut(s) 1440, 1538, 1668, 2321
MaeII ACGT 3 cut(s) 303, 831, 1989
MaeIII GTNAC 7 cut(s) 275, 351, 443, 875, 1030, 1697, 2221
MalI GATC 4 cut(s) 531, 579, 1329, 2301
MbiI CCGCTC 1 cut(s) 2347
MboI GATC 4 cut(s) 529, 577, 1327, 2299
MboII GAAGA 8 cut(s) 260, 916, 977, 1030, 1538, 1757, 1817, 2284
MfeI CAATTG 1 cut(s) 849
MflI RGATCY 3 cut(s) 577, 1327, 2299
MhlI GDGCHC 2 cut(s) 753, 2206
MlsI TGGCCA 1 cut(s) 1433
MluNI TGGCCA 1 cut(s) 1433
MlyI GAGTC 2 cut(s) 490, 1410
MmeI TCCRAC 5 cut(s) 378, 587, 645, 1513, 1542
Mox20I TGGCCA 1 cut(s) 1433
Mph1103I ATGCAT 1 cut(s) 736
MroXI GAANNNNTTC 1 cut(s) 1063
MscI TGGCCA 1 cut(s) 1433
MseI TTAA 7 cut(s) 318, 387, 1043, 1401, 1608, 2127, 2400
MslI CAYNNNNRTG 2 cut(s) 968, 1971
Msp20I TGGCCA 1 cut(s) 1433
MspA1I CMGCKG 2 cut(s) 760, 1901
MspI CCGG 7 cut(s) 178, 794, 2077, 2195, 2232, 2361, 2388
MspR9I CCNGG 5 cut(s) 60, 179, 772, 2232, 2233
MunI CAATTG 1 cut(s) 849
Mva1269I GAATGC 1 cut(s) 718
MvaI CCWGG 2 cut(s) 60, 772
MvnI CGCG 1 cut(s) 1938
MwoI GCNNNNNNNGC 7 cut(s) 722, 731, 757, 1316, 1817, 1826, 1904
NciI CCSGG 3 cut(s) 179, 2232, 2233
NdeI CATATG 1 cut(s) 200
NdeII GATC 4 cut(s) 529, 577, 1327, 2299
NlaIII CATG 8 cut(s) 290, 453, 492, 705, 738, 806, 1188, 2119
NlaIV GGNNCC 5 cut(s) 32, 707, 798, 1294, 1566
NmeAIII GCCGAG 1 cut(s) 99
NmuCI GTSAC 4 cut(s) 275, 351, 443, 1697
NsiI ATGCAT 1 cut(s) 736
NspI RCATGY 3 cut(s) 453, 492, 2119
NspV TTCGAA 1 cut(s) 2156
PagI TCATGA 1 cut(s) 802
PaqCI CACCTGC 1 cut(s) 2284
PceI AGGCCT 1 cut(s) 1159
PcsI WCGNNNNNNNCGW 1 cut(s) 169
PctI GAATGC 1 cut(s) 718
PdmI GAANNNNTTC 1 cut(s) 1063
PfeI GAWTC 3 cut(s) 559, 907, 1979
PflMI CCANNNNNTGG 1 cut(s) 735
PkrI GCNGC 7 cut(s) 432, 435, 759, 1819, 1831, 1900, 2152
PleI GAGTC 2 cut(s) 490, 1410
PpsI GAGTC 2 cut(s) 490, 1410
Ppu21I YACGTR 2 cut(s) 832, 1990
Psp6I CCWGG 2 cut(s) 58, 770
PspFI CCCAGC 1 cut(s) 695
PspGI CCWGG 2 cut(s) 58, 770
PspN4I GGNNCC 5 cut(s) 32, 707, 798, 1294, 1566
PspPI GGNCC 2 cut(s) 31, 1495
PstI CTGCAG 1 cut(s) 1900
PstNI CAGNNNCTG 1 cut(s) 695
PsuI RGATCY 3 cut(s) 577, 1327, 2299
PvuII CAGCTG 1 cut(s) 1901
RsaI GTAC 6 cut(s) 218, 346, 1040, 1487, 1864, 1988
RsaNI GTAC 6 cut(s) 217, 345, 1039, 1486, 1863, 1987
RseI CAYNNNNRTG 2 cut(s) 968, 1971
SaqAI TTAA 7 cut(s) 318, 387, 1043, 1401, 1608, 2127, 2400
SatI GCNGC 7 cut(s) 431, 434, 758, 1818, 1830, 1899, 2151
Sau3AI GATC 4 cut(s) 529, 577, 1327, 2299
Sau96I GGNCC 2 cut(s) 31, 1495
ScaI AGTACT 1 cut(s) 1040
SchI GAGTC 2 cut(s) 490, 1410
ScrFI CCNGG 5 cut(s) 60, 179, 772, 2232, 2233
SduI GDGCHC 2 cut(s) 753, 2206
SfaNI GCATC 5 cut(s) 832, 1297, 1552, 1963, 1975
SfcI CTRYAG 1 cut(s) 1896
SfuI TTCGAA 1 cut(s) 2156
SinI GGWCC 2 cut(s) 31, 1495
SmaI CCCGGG 1 cut(s) 2233
SmiMI CAYNNNNRTG 2 cut(s) 968, 1971
SmlI CTYRAG 1 cut(s) 498
SmoI CTYRAG 1 cut(s) 498
SnaBI TACGTA 1 cut(s) 1990
SpeI ACTAGT 2 cut(s) 1537, 2320
SseBI AGGCCT 1 cut(s) 1159
SsiI CCGC 9 cut(s) 467, 760, 1190, 1313, 1936, 1976, 2119, 2192, 2345
SspMI CTAG 4 cut(s) 1440, 1538, 1668, 2321
StuI AGGCCT 1 cut(s) 1159
StyD4I CCNGG 5 cut(s) 58, 177, 770, 2230, 2231
StyI CCWWGG 2 cut(s) 24, 1676
TaiI ACGT 3 cut(s) 306, 834, 1992
TaqI TCGA 4 cut(s) 616, 1249, 1590, 2156
TatI WGTACW 2 cut(s) 1038, 1485
TfiI GAWTC 3 cut(s) 559, 907, 1979
Tru1I TTAA 7 cut(s) 318, 387, 1043, 1401, 1608, 2127, 2400
Tru9I TTAA 7 cut(s) 318, 387, 1043, 1401, 1608, 2127, 2400
TseFI GTSAC 4 cut(s) 275, 351, 443, 1697
TseI GCWGC 7 cut(s) 430, 433, 757, 1817, 1829, 1898, 2150
Tsp45I GTSAC 4 cut(s) 275, 351, 443, 1697
TspDTI ATGAA 7 cut(s) 284, 324, 696, 1031, 1065, 1231, 1758
TspGWI ACGGA 1 cut(s) 245
TspMI CCCGGG 1 cut(s) 2231
Van91I CCANNNNNTGG 1 cut(s) 735
VneI GTGCAC 1 cut(s) 2202
VpaK11BI GGWCC 2 cut(s) 31, 1495
XapI RAATTY 3 cut(s) 335, 612, 1754
XceI RCATGY 3 cut(s) 453, 492, 2119
XcmI CCANNNNNNNNNTGG 1 cut(s) 2179
XmaI CCCGGG 1 cut(s) 2231
XmiI GTMKAC 1 cut(s) 156
XmnI GAANNNNTTC 1 cut(s) 1063
XspI CTAG 4 cut(s) 1440, 1538, 1668, 2321
ZrmI AGTACT 1 cut(s) 1040
Zsp2I ATGCAT 1 cut(s) 736
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.