Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0001029

Physical Location & Seq

Genomic Coordinates Forward (+)

17142849 .. 17150344

Gene Structure 7496 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g13560.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGCAGCAGCTGTACTGTGATACATGTACACGGTTTTTAGCCGACAGGCTCGTGGAGGGGACGTGCCCGACTCAGGGTTGTGATTATGCTTCCGCAAGAGGAGATCAGTGTGAGAACTGTGGGAAGCTTTTGAACCCCACAGAATTGAAGGATCCAAAGTGCAAGGTTTGTAAGTCGACTCCACGGATTCGTGATACAAACCATTTGTTTCTGGAACTTCCTTTGCTGAAGGATAGGTTGAAAGAATATATTGATAAAATGTCAGTGGAGGGTTCCTGGAGCCAGAATGCCATTCAAGCGACAAATGCATGGCTCAAAGAGGGGCTTAGACAACGGTGTATCACCAGAGATCTGAAGTGGGGGGTTCCAGTTCCACATGATAACTTCAGGGACAAGGTTTTCTATGTGTGGTTTGATGCGCCTATTGGATATGTTTCAATTACTAAATGCTACACTCCGGATTGGGAGAAATGGTGGAAGAATCCAGAGGATGTGGAGTTGTATCAGTTTATGGGCAAAGATAATGTGCCATTCCACACGGTGATGTTTCCTTCCACGCTTCTTGGAACTGGTGAAAATTGGACTTTGATGAAGACAATAAGTGTTACTGAATACTTGAACTATGAAGCAGGAAAATTTTCTAAGAGCAAGGGTATCGGAGTATTTGGAAACGATGCCAAAGATACAAACATTCCTGTTGAAGTATGGCGATATTACTTGCTAACCAATAGGCCCGAGGTGTCAGACACATTATTTACATGGGCGGATCTGCAAGCGAAACTCAACAGTGAATTACTGAATAATTTGGGCAACTTCATTAACCGAGTTTTGAGTTTTGTTGCCAAACCTTCAGGTCAAGGATATGACTCCATTGTTCCTGATGCTCCAGATGCAGTCTCTGATCCTTTGACAGAGAAAATAGGTGAAAAAGTGGGTAAATGTGTGGAGGAATACGTAGAGGCCATGGAAAAGGTAAAACTAAAGCAAGGACTCAAACTAGCCATGAGCATTTCGAGCGAAGGGAATGCATATCTGCAAGAAAGTCAGTTCTGGAAACTTTACAAGCAAGACCGACCTCGCTGCTCCGTTGTTATGAGAACTGCAGTGGGGCTGGTGCATCTTCTTGCCTGCCTATTGGAGCCTTTCATGCCATCGTTTTCTGTTGAGGTATTTAAGCAGCTTAATTTGCCTGCTGAGACGCACATATCACTTTGTGATGATAAAGGCGATATTGATAGGGCAAGAAAGCCTTGGGAAATTGTACCAATAGGTCACAAGATTGGGAAACCAGAGCCGTTGTTCAAGGAATTGAATGATGATGAAGTAGATTTTCTAAGGAAGAAGTTTGCTGGAAGTCAGGCTGATAGAAAGGAAAGGGAAGAAGCCGAAGCAGTGAAGTTGGCTGAGCAACTTAAGAAATCGAAACTTTCAGACAAGACTGGAAAGAAGAAACAACAAGCAACAAAATCTGCAACTGAAGCAGAGATTTCCATATCTAGACTAGATATTCGTGTCGGCCTTATTACAAAAGCTCAGAAACATCCTGATGCTGATTCACTTTATGTAGAAGAGATTGATGTTGGCGAAGGACAGCCCAGAACAGTTGTCAGTGGACTAGTCAAGTTTATACCTCTTGAGGAAATGCAGAATCGAAAGGTATGCGTCCTTTGCAACCTGAAGCCAGCGACCATGCGGGGTATTAAATCACAAGCAATGGTTCTTGCTGCTTCAAATAGTGATCACACCGCAGTTGAGTTGGTTGATCCACCACTATCTGCTCAAGTTGGGGAGAGAATTACATTCCCAGGGTTTGAAGGTGAGCCTGATGATGTGTTGAACCCCAAGAAGAAGGTTTGGGAGACCCTGCAGGTAGATTTGCAGAGTAACAATGAGCTAGTCGCTTGCTATAAAGATATTCCCCTCGCTACATCAGCTGGTGTTTGCACTGTTAAATCTATTCGTGGTGGGGCAATTAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016070 GO:0019538 GO:0019752 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046686 GO:0050896 GO:0071704 GO:0090304 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00450 ko00970 map00450 map00970

Pfam Domains

Protein Families

Anticodon_1 tRNA-synt_1g tRNA_bind

Protein Analysis

660

Amino Acids

74.18

Weight (kDa)

6.35

Isoelectric Point (pI)

24.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1g	PF09334	18 - 412	5.5e-155	tRNA synthetases class I (M)
tRNA-synt_1	PF00133	20 - 261	5.9e-09	tRNA synthetases class I (I, L, M and V)
Anticodon_3	PF19303	439 - 588	1.4e-18	Anticodon binding domain of methionyl tRNA ligase
tRNA_bind	PF01588	638 - 733	2.2e-32	Putative tRNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001029)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13780
fragaria_vesca	FvH4_4g13560 FvH4_4g13560 FvH4_4g13560 FvH4_4g36101 FvH4_4g36103
malus_domestica	MD04G1013400.v1.1 MD05G1172700.v1.1 MD10G1161000.v1.1
prunus_persica	Prupe.1G159500_v2.0.a1 Prupe.1G159500_v2.0.a1 Prupe.1G159500_v2.0.a1 Prupe.2G130000_v2.0.a1 Prupe.2G130800_v2.0.a1 Prupe.8G200100_v2.0.a1 Prupe.8G200100_v2.0.a1
pyrus_communis	pycom04g01040 pycom05g15930 pycom10g13910
rosa_chinensis	RchiOBHm_Chr1g0332221 RchiOBHm_Chr2g0166871 RchiOBHm_Chr4g0414311 RchiOBHm_Chr4g0442441
rosa_laevigata	RLG00000005711 RLG00000008159 RLG00000021676
rosa_multiflora	Rmu_co8251943.1_g000001 Rmu_co8341625.1_g000001 Rmu_sc0000733.1_g000008 Rmu_sc0001063.1_g000003 Rmu_sc0002735.1_g000014 Rmu_sc0005196.1_g000006 Rmu_sc0005344.1_g000007 Rmu_sc0032860.1_g000001
rosa_roxburghii	Rroxscaffold_2G00084040 Rroxscaffold_2G00084460 Rroxscaffold_4G00318360 Rroxscaffold_5G00358180
rosa_rugosa	Rorug01G0098500 Rorug01G0098600 Rorug01G0098700 Rorug01G0098800 Rorug01G0098900 Rorug02G0526100 Rorug04G0126800
rosa_samantha	Rh1AG122600 Rh1BG093900 Rh1CG117200 Rh1DG128200 Rh2AG593100 Rh2BG604400 Rh2CG575300 Rh2DG616000 Rh4AG184800 Rh4BG184300 Rh4CG197700 Rh4DG181400 Rh4DG182000
rosa_wichuraiana	Rw1G010000 Rw2G049370 Rw4G015810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1858
AccI	GTMKAC	1 cut(s)	176
AccIII	TCCGGA	1 cut(s)	457
AciI	CCGC	4 cut(s)	93, 764, 1693, 1746
AclWI	GGATC	5 cut(s)	146, 159, 774, 896, 1757
AcsI	RAATTY	1 cut(s)	635
AcuI	CTGAAG	6 cut(s)	248, 370, 374, 834, 1497, 1697
AdeI	CACNNNGTG	2 cut(s)	541, 1214
AfaI	GTAC	3 cut(s)	14, 28, 1263
AfiI	CCNNNNNNNGG	2 cut(s)	73, 74
AflII	CTTAAG	1 cut(s)	1412
AflIII	ACRYGT	1 cut(s)	23
AhlI	ACTAGT	1 cut(s)	1615
AjiI	CACGTC	1 cut(s)	63
AjnI	CCWGG	2 cut(s)	275, 1804
AluBI	AGCT	6 cut(s)	10, 127, 1180, 1532, 1894, 1934
AluI	AGCT	6 cut(s)	10, 127, 1180, 1532, 1894, 1934
Alw26I	GTCTC	3 cut(s)	901, 1190, 1853
AlwI	GGATC	5 cut(s)	146, 159, 774, 896, 1757
AlwNI	CAGNNNCTG	2 cut(s)	10, 899
Ama87I	CYCGRG	1 cut(s)	734
Aor13HI	TCCGGA	1 cut(s)	457
AoxI	GGCC	3 cut(s)	731, 960, 1516
ApeKI	GCWGC	5 cut(s)	4, 7, 1080, 1177, 1724
ApoI	RAATTY	1 cut(s)	635
ArsI	GACNNNNNNTTYG	2 cut(s)	1491, 1523
Asp700I	GAANNNNTTC	1 cut(s)	637
AspLEI	GCGC	1 cut(s)	421
AspS9I	GGNCC	1 cut(s)	732
AsuHPI	GGTGA	5 cut(s)	334, 553, 584, 935, 1829
AvaI	CYCGRG	1 cut(s)	734
BaeGI	GKGCMC	1 cut(s)	68
BamHI	GGATCC	1 cut(s)	151
BauI	CACGAG	1 cut(s)	50
BbsI	GAAGAC	1 cut(s)	599
BbvI	GCAGC	5 cut(s)	16, 19, 1067, 1189, 1711
BccI	CCATC	1 cut(s)	1159
BceAI	ACGGC	1 cut(s)	1279
BcgI	CGANNNNNNTGC	8 cut(s)	637, 671, 1007, 1041, 1062, 1096, 1641, 1675
BciT130I	CCWGG	2 cut(s)	277, 1806
BclI	TGATCA	1 cut(s)	1738
BcoDI	GTCTC	3 cut(s)	901, 1190, 1853
BcuI	ACTAGT	1 cut(s)	1615
BfaI	CTAG	5 cut(s)	998, 1497, 1502, 1616, 1895
BfmI	CTRYAG	2 cut(s)	1101, 1865
BfrI	CTTAAG	1 cut(s)	1412
BfuAI	ACCTGC	1 cut(s)	1858
BglII	AGATCT	1 cut(s)	349
BisI	GCNGC	5 cut(s)	5, 8, 1081, 1178, 1725
BlpI	GCTNAGC	1 cut(s)	1404
BlsI	GCNGC	5 cut(s)	6, 9, 1082, 1179, 1726
Bme1390I	CCNGG	2 cut(s)	277, 1806
BmeT110I	CYCGRG	1 cut(s)	734
BmgBI	CACGTC	1 cut(s)	63
BmgT120I	GGNCC	1 cut(s)	732
BmiI	GGNNCC	5 cut(s)	153, 274, 281, 366, 1140
BmrFI	CCNGG	2 cut(s)	277, 1806
BmsI	GCATC	6 cut(s)	406, 664, 871, 880, 1126, 1537
BpiI	GAAGAC	1 cut(s)	599
BpmI	CTGGAG	2 cut(s)	298, 870
Bpu1102I	GCTNAGC	1 cut(s)	1404
BpuEI	CTTGAG	2 cut(s)	1655, 1764
BsaAI	YACGTR	1 cut(s)	955
BsaI	GGTCTC	1 cut(s)	1853
BsaJI	CCNNGG	6 cut(s)	182, 735, 963, 1250, 1804, 1805
BsaWI	WCCGGW	1 cut(s)	457
BsaXI	ACNNNNNCTCC	4 cut(s)	47, 77, 458, 488
Bsc4I	CCNNNNNNNGG	2 cut(s)	73, 74
Bse1I	ACTGG	3 cut(s)	368, 574, 1444
Bse3DI	GCAATG	1 cut(s)	1719
BseAI	TCCGGA	1 cut(s)	457
BseBI	CCWGG	2 cut(s)	277, 1806
BseDI	CCNNGG	6 cut(s)	182, 735, 963, 1250, 1804, 1805
BseGI	GGATG	2 cut(s)	496, 1540
BseLI	CCNNNNNNNGG	2 cut(s)	73, 74
BseMI	GCAATG	1 cut(s)	1719
BseMII	CTCAG	4 cut(s)	86, 1185, 1395, 1547
BseNI	ACTGG	3 cut(s)	368, 574, 1444
BseRI	GAGGAG	1 cut(s)	114
BseSI	GKGCMC	1 cut(s)	68
BseXI	GCAGC	5 cut(s)	16, 19, 1067, 1189, 1711
BshFI	GGCC	3 cut(s)	733, 962, 1518
BsiHKCI	CYCGRG	1 cut(s)	734
BsiSI	CCGG	1 cut(s)	458
BslFI	GGGAC	2 cut(s)	73, 404
BslI	CCNNNNNNNGG	2 cut(s)	73, 74
BsmAI	GTCTC	3 cut(s)	901, 1190, 1853
BsmBI	CGTCTC	1 cut(s)	1190
BsmFI	GGGAC	2 cut(s)	73, 404
BsmI	GAATGC	2 cut(s)	292, 1030
BsnI	GGCC	3 cut(s)	733, 962, 1518
Bso31I	GGTCTC	1 cut(s)	1853
BsoBI	CYCGRG	1 cut(s)	734
Bsp1286I	GDGCHC	1 cut(s)	68
Bsp13I	TCCGGA	1 cut(s)	457
Bsp1407I	TGTACA	1 cut(s)	26
Bsp143I	GATC	7 cut(s)	103, 151, 349, 766, 901, 1738, 1762
Bsp1720I	GCTNAGC	1 cut(s)	1404
Bsp19I	CCATGG	1 cut(s)	963
BspACI	CCGC	4 cut(s)	93, 764, 1693, 1746
BspANI	GGCC	3 cut(s)	733, 962, 1518
BspCNI	CTCAG	4 cut(s)	85, 1186, 1396, 1546
BspEI	TCCGGA	1 cut(s)	457
BspLI	GGNNCC	5 cut(s)	153, 274, 281, 366, 1140
BspMAI	CTGCAG	2 cut(s)	1105, 1869
BspMI	ACCTGC	1 cut(s)	1858
BspPI	GGATC	5 cut(s)	146, 159, 774, 896, 1757
BspTI	CTTAAG	1 cut(s)	1412
BspTNI	GGTCTC	1 cut(s)	1853
BsrDI	GCAATG	1 cut(s)	1719
BsrGI	TGTACA	1 cut(s)	26
BsrI	ACTGG	3 cut(s)	368, 574, 1444
BssECI	CCNNGG	6 cut(s)	182, 735, 963, 1250, 1804, 1805
BssMI	GATC	7 cut(s)	103, 151, 349, 766, 901, 1738, 1762
BssSI	CACGAG	1 cut(s)	50
BssT1I	CCWWGG	2 cut(s)	963, 1250
Bst2BI	CACGAG	1 cut(s)	50
Bst2UI	CCWGG	2 cut(s)	277, 1806
Bst4CI	ACNGT	8 cut(s)	17, 33, 119, 336, 541, 788, 1603, 1948
Bst6I	CTCTTC	1 cut(s)	1563
BstAFI	CTTAAG	1 cut(s)	1412
BstAUI	TGTACA	1 cut(s)	26
BstBAI	YACGTR	1 cut(s)	955
BstC8I	GCNNGC	5 cut(s)	774, 1129, 1191, 1683, 1903
BstDEI	CTNAG	7 cut(s)	72, 326, 642, 1194, 1334, 1404, 1533
BstDSI	CCRYGG	2 cut(s)	182, 963
BstF5I	GGATG	2 cut(s)	496, 1540
BstHHI	GCGC	1 cut(s)	421
BstKTI	GATC	7 cut(s)	106, 154, 352, 769, 904, 1741, 1765
BstMAI	GTCTC	3 cut(s)	901, 1190, 1853
BstMBI	GATC	7 cut(s)	103, 151, 349, 766, 901, 1738, 1762
BstMWI	GCNNNNNNNGC	9 cut(s)	296, 305, 890, 1014, 1147, 1186, 1478, 1668, 1931
BstNI	CCWGG	2 cut(s)	277, 1806
BstNSI	RCATGY	1 cut(s)	27
BstSCI	CCNGG	2 cut(s)	275, 1804
BstSFI	CTRYAG	2 cut(s)	1101, 1865
BstSLI	GKGCMC	1 cut(s)	68
BstSNI	TACGTA	1 cut(s)	955
BstV1I	GCAGC	5 cut(s)	16, 19, 1067, 1189, 1711
BstV2I	GAAGAC	1 cut(s)	599
BstX2I	RGATCY	3 cut(s)	151, 349, 766
BstYI	RGATCY	3 cut(s)	151, 349, 766
BsuRI	GGCC	3 cut(s)	733, 962, 1518
BtgI	CCRYGG	2 cut(s)	182, 963
BtrI	CACGTC	1 cut(s)	63
BtsCI	GGATG	2 cut(s)	496, 1540
BtsI	GCAGTG	2 cut(s)	1110, 1398
BtsIMutI	CAGTG	7 cut(s)	113, 270, 793, 1110, 1398, 1615, 1944
BveI	ACCTGC	1 cut(s)	1858
Cac8I	GCNNGC	5 cut(s)	774, 1129, 1191, 1683, 1903
CaiI	CAGNNNCTG	2 cut(s)	10, 899
CfoI	GCGC	1 cut(s)	421
Cfr13I	GGNCC	1 cut(s)	732
CseI	GACGC	2 cut(s)	1207, 1651
Csp6I	GTAC	3 cut(s)	13, 27, 1262
CspCI	CAANNNNNGTGG	2 cut(s)	544, 579
CviAII	CATG	8 cut(s)	24, 309, 377, 759, 964, 1003, 1147, 1690
CviQI	GTAC	3 cut(s)	13, 27, 1262
DdeI	CTNAG	7 cut(s)	72, 326, 642, 1194, 1334, 1404, 1533
DpnI	GATC	7 cut(s)	105, 153, 351, 768, 903, 1740, 1764
DpnII	GATC	7 cut(s)	103, 151, 349, 766, 901, 1738, 1762
DraIII	CACNNNGTG	2 cut(s)	541, 1214
Eam1104I	CTCTTC	1 cut(s)	1563
EarI	CTCTTC	1 cut(s)	1563
EciI	GGCGGA	1 cut(s)	779
Eco105I	TACGTA	1 cut(s)	955
Eco130I	CCWWGG	2 cut(s)	963, 1250
Eco31I	GGTCTC	1 cut(s)	1853
Eco57I	CTGAAG	6 cut(s)	248, 370, 374, 834, 1497, 1697
Eco88I	CYCGRG	1 cut(s)	734
EcoRII	CCWGG	2 cut(s)	275, 1804
EcoT14I	CCWWGG	2 cut(s)	963, 1250
EcoT22I	ATGCAT	2 cut(s)	310, 1030
ErhI	CCWWGG	2 cut(s)	963, 1250
Esp3I	CGTCTC	1 cut(s)	1190
FaeI	CATG	8 cut(s)	27, 312, 380, 762, 967, 1006, 1150, 1693
FalI	AAGNNNNNCTT	4 cut(s)	309, 341, 1234, 1266
FaqI	GGGAC	2 cut(s)	73, 404
FatI	CATG	8 cut(s)	23, 308, 376, 758, 963, 1002, 1146, 1689
FauI	CCCGC	1 cut(s)	1686
FbaI	TGATCA	1 cut(s)	1738
FblI	GTMKAC	1 cut(s)	176
Fnu4HI	GCNGC	5 cut(s)	5, 8, 1081, 1178, 1725
FokI	GGATG	2 cut(s)	503, 1527
Fsp4HI	GCNGC	5 cut(s)	5, 8, 1081, 1178, 1725
FspBI	CTAG	5 cut(s)	998, 1497, 1502, 1616, 1895
GlaI	GCGC	1 cut(s)	420
GluI	GCNGC	5 cut(s)	5, 8, 1081, 1178, 1725
GsuI	CTGGAG	2 cut(s)	298, 870
HaeIII	GGCC	3 cut(s)	733, 962, 1518
HapII	CCGG	1 cut(s)	458
HgaI	GACGC	2 cut(s)	1207, 1651
HhaI	GCGC	1 cut(s)	421
Hin1II	CATG	8 cut(s)	27, 312, 380, 762, 967, 1006, 1150, 1693
Hin6I	GCGC	1 cut(s)	419
HinP1I	GCGC	1 cut(s)	419
HincII	GTYRAC	1 cut(s)	177
HindII	GTYRAC	1 cut(s)	177
HindIII	AAGCTT	1 cut(s)	125
HinfI	GANTC	8 cut(s)	70, 178, 187, 481, 866, 990, 1553, 1648
HpaII	CCGG	1 cut(s)	458
HphI	GGTGA	5 cut(s)	334, 553, 584, 935, 1829
Hpy166II	GTNNAC	3 cut(s)	29, 177, 1613
Hpy188I	TCNGA	6 cut(s)	354, 659, 745, 901, 1432, 1536
Hpy8I	GTNNAC	3 cut(s)	29, 177, 1613
HpyAV	CCTTC	8 cut(s)	142, 223, 561, 858, 1013, 1580, 1808, 1843
HpyCH4III	ACNGT	8 cut(s)	17, 33, 119, 336, 541, 788, 1603, 1948
HpyCH4IV	ACGT	2 cut(s)	62, 954
HpyF10VI	GCNNNNNNNGC	9 cut(s)	296, 305, 890, 1014, 1147, 1186, 1478, 1668, 1931
HpyF3I	CTNAG	7 cut(s)	72, 326, 642, 1194, 1334, 1404, 1533
HpySE526I	ACGT	2 cut(s)	62, 954
Hsp92II	CATG	8 cut(s)	27, 312, 380, 762, 967, 1006, 1150, 1693
HspAI	GCGC	1 cut(s)	419
Kpn2I	TCCGGA	1 cut(s)	457
Ksp22I	TGATCA	1 cut(s)	1738
Kzo9I	GATC	7 cut(s)	103, 151, 349, 766, 901, 1738, 1762
LmnI	GCTCC	4 cut(s)	279, 889, 1088, 1138
Lsp1109I	GCAGC	5 cut(s)	16, 19, 1067, 1189, 1711
LweI	GCATC	6 cut(s)	406, 664, 871, 880, 1126, 1537
MaeI	CTAG	5 cut(s)	998, 1497, 1502, 1616, 1895
MaeII	ACGT	2 cut(s)	62, 954
MaeIII	GTNAC	3 cut(s)	604, 1271, 1883
MalI	GATC	7 cut(s)	105, 153, 351, 768, 903, 1740, 1764
MboI	GATC	7 cut(s)	103, 151, 349, 766, 901, 1738, 1762
MboII	GAAGA	8 cut(s)	490, 604, 1112, 1351, 1391, 1459, 1580, 1858
MflI	RGATCY	3 cut(s)	151, 349, 766
MhlI	GDGCHC	1 cut(s)	68
MlyI	GAGTC	4 cut(s)	64, 172, 860, 984
Mph1103I	ATGCAT	2 cut(s)	310, 1030
MroI	TCCGGA	1 cut(s)	457
MroXI	GAANNNNTTC	1 cut(s)	637
MseI	TTAA	6 cut(s)	819, 1173, 1182, 1413, 1701, 1950
MslI	CAYNNNNRTG	2 cut(s)	542, 1545
MspA1I	CMGCKG	2 cut(s)	10, 1934
MspCI	CTTAAG	1 cut(s)	1412
MspI	CCGG	1 cut(s)	458
MspR9I	CCNGG	2 cut(s)	277, 1806
Mva1269I	GAATGC	2 cut(s)	292, 1030
MvaI	CCWGG	2 cut(s)	277, 1806
MwoI	GCNNNNNNNGC	9 cut(s)	296, 305, 890, 1014, 1147, 1186, 1478, 1668, 1931
NcoI	CCATGG	1 cut(s)	963
NdeII	GATC	7 cut(s)	103, 151, 349, 766, 901, 1738, 1762
NlaIII	CATG	8 cut(s)	27, 312, 380, 762, 967, 1006, 1150, 1693
NlaIV	GGNNCC	5 cut(s)	153, 274, 281, 366, 1140
NmuCI	GTSAC	1 cut(s)	1271
NsiI	ATGCAT	2 cut(s)	310, 1030
NspI	RCATGY	1 cut(s)	27
PasI	CCCWGGG	1 cut(s)	1805
PciI	ACATGT	1 cut(s)	23
PctI	GAATGC	2 cut(s)	292, 1030
PdmI	GAANNNNTTC	1 cut(s)	637
PfeI	GAWTC	4 cut(s)	187, 481, 1553, 1648
PfoI	TCCNGGA	1 cut(s)	275
PkrI	GCNGC	5 cut(s)	6, 9, 1082, 1179, 1726
PleI	GAGTC	4 cut(s)	64, 172, 860, 984
PpsI	GAGTC	4 cut(s)	64, 172, 860, 984
Ppu21I	YACGTR	1 cut(s)	955
PscI	ACATGT	1 cut(s)	23
Psp6I	CCWGG	2 cut(s)	275, 1804
PspGI	CCWGG	2 cut(s)	275, 1804
PspN4I	GGNNCC	5 cut(s)	153, 274, 281, 366, 1140
PspPI	GGNCC	1 cut(s)	732
PstI	CTGCAG	2 cut(s)	1105, 1869
PstNI	CAGNNNCTG	2 cut(s)	10, 899
PsuI	RGATCY	3 cut(s)	151, 349, 766
PvuII	CAGCTG	2 cut(s)	10, 1934
RsaI	GTAC	3 cut(s)	14, 28, 1263
RsaNI	GTAC	3 cut(s)	13, 27, 1262
RseI	CAYNNNNRTG	2 cut(s)	542, 1545
SalI	GTCGAC	1 cut(s)	175
SaqAI	TTAA	6 cut(s)	819, 1173, 1182, 1413, 1701, 1950
SatI	GCNGC	5 cut(s)	5, 8, 1081, 1178, 1725
Sau3AI	GATC	7 cut(s)	103, 151, 349, 766, 901, 1738, 1762
Sau96I	GGNCC	1 cut(s)	732
SbfI	CCTGCAGG	1 cut(s)	1869
SchI	GAGTC	4 cut(s)	64, 172, 860, 984
ScrFI	CCNGG	2 cut(s)	277, 1806
SdaI	CCTGCAGG	1 cut(s)	1869
SduI	GDGCHC	1 cut(s)	68
SfaNI	GCATC	6 cut(s)	406, 664, 871, 880, 1126, 1537
SfcI	CTRYAG	2 cut(s)	1101, 1865
SmiMI	CAYNNNNRTG	2 cut(s)	542, 1545
SmlI	CTYRAG	3 cut(s)	1412, 1634, 1779
SmoI	CTYRAG	3 cut(s)	1412, 1634, 1779
SnaBI	TACGTA	1 cut(s)	955
SpeI	ACTAGT	1 cut(s)	1615
Sse8387I	CCTGCAGG	1 cut(s)	1869
SsiI	CCGC	4 cut(s)	93, 764, 1693, 1746
SspMI	CTAG	5 cut(s)	998, 1497, 1502, 1616, 1895
StyD4I	CCNGG	2 cut(s)	275, 1804
StyI	CCWWGG	2 cut(s)	963, 1250
TaaI	ACNGT	8 cut(s)	17, 33, 119, 336, 541, 788, 1603, 1948
TaiI	ACGT	2 cut(s)	65, 957
TaqI	TCGA	4 cut(s)	176, 1013, 1421, 1651
TaqII	GACCGA	1 cut(s)	1086
TatI	WGTACW	2 cut(s)	12, 26
TfiI	GAWTC	4 cut(s)	187, 481, 1553, 1648
Tru1I	TTAA	6 cut(s)	819, 1173, 1182, 1413, 1701, 1950
Tru9I	TTAA	6 cut(s)	819, 1173, 1182, 1413, 1701, 1950
TscAI	CASTG	7 cut(s)	113, 270, 793, 1110, 1398, 1615, 1951
TseFI	GTSAC	1 cut(s)	1271
TseI	GCWGC	5 cut(s)	4, 7, 1080, 1177, 1724
Tsp45I	GTSAC	1 cut(s)	1271
TspDTI	ATGAA	5 cut(s)	605, 639, 805, 1135, 1335
TspGWI	ACGGA	2 cut(s)	199, 1075
TspRI	CASTG	7 cut(s)	113, 270, 793, 1110, 1398, 1615, 1951
Vha464I	CTTAAG	1 cut(s)	1412
XapI	RAATTY	1 cut(s)	635
XbaI	TCTAGA	1 cut(s)	1496
XceI	RCATGY	1 cut(s)	27
XmiI	GTMKAC	1 cut(s)	176
XmnI	GAANNNNTTC	1 cut(s)	637
XspI	CTAG	5 cut(s)	998, 1497, 1502, 1616, 1895
Zsp2I	ATGCAT	2 cut(s)	310, 1030

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.