Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0001029

Physical Location & Seq

Genomic Coordinates Forward (+)

38243989 .. 38251112

Gene Structure 7124 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00358180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2511 bp

ATGGGAGACCTCGCCGTTACTTCCAAGGAGGGCCCCAAGCTCCCCATCCCCGGCCAACGCAACGTCCTCATCACCAGCGCATTGCCGTATGTCAACAACGTCCCTCATCTCGGCAACATCATCGGCTGTGTTCTCAGCGCCGATGTCTTCGCTCGCTACTGCCGTCTCCGGGGATACAACACCGTCTATATCTGTGGCACCGATGAGTACGGCACTGCCACCGAGACCAAAGCCCTGGAGGAGAAGTGTAGCCCCAAGGAGATCTGCGATAAGTATCATGCGATTCATAGGCAGGTGTACGAGTGGTTCAATATAAGTTTTGACAAATTCGGGCGAACTTCGACGCCGGAGCAGACGGAGGTGTGCCAAGCGATTTTCAATAGGCTGCTGGAGAATAATTGGCTTTCTGAGAACACAATGCAGCAGCTATATTGTGATACTTGCACACGGTTTTTAGCCGACAGGCTTGTGGAGGGGACGTGCCCAACTCAAGGTTGTGATTATACCTCTGCAAGAGGAGATCAGTGTGAGAACTGTGGGAAGCTTTTAAACCCCACAGAATTAAAGGATCCGAAGTGCAAGGTCTGTAAGTCGACTCCACGGATTCGTGATACAAACCATTTGTTTCTGGAACTGCCTTTGCTGAAGGATAGGTTGGAAGAGTATATTAATAAAATGTCAGTGGAGGGGTCTTGGAGCCAGAATGCCATTCAAGCAACAAATGCGTGGCTCAGAGAGGGGCTTAAACAACGGTGTATCACTAGGGATCTGAAGTGGGGGGTTCCAGTTCCACATGATAACTTCAGGGACAAGGTTTTCTATGTGTGGTTTGATGCGCCTATTGGATATGTTTCAATTACTAAATGCTACACTCCAGATTGGGAGAAATGGTGGAAGAATCCAGAGGATGTGGAGTTGTATCAGTTTATGGGCAAAGATAATGTGCCATTCCACACGGTGATGTTTCCTTCCACGCTTCTTGGAACTGGTGAAAATTGGACCTTAATGAAGACAATTAGTGTTACTGAATACTTGAACTATGAAGCAGGAAAGTTTTCCAAGAGTAAAGGGATTGGAGTATTTGGAAACGATGCCAGAGATACAAACATTCCTGTTGAAGTATGGCGATATTACTTGCTGACCAATAGGCCCGAGGTGTCGGATACATTATTTACATGGGCGGATTTGCAAGCGAAGCTCAACAGTGAATTGCTGAATAATTTGGGCAACTTCATTAACCGAGTTTTGAGTTTTGTTGCCAAACCTTCAGGTCCAATGGTAGAGCCCTTGTGCATAAGCTTATTTCCAGAGTTTAACTTCTCACCCTCCCCTTCCCTGGATCGTAAGCAAATGACTGTAAGCCAGTCAACTGCTAGACCAACAGGTCAAGGATATGACTCCATTATTCCAGATGCTCAAGATGCCATCTCTGATCCTTTGACAGAGAAAATAGCTGAAAAAGTGGGTAAATGTGTGGAGCAATATGTGGAGGCCATGGAGAAGGTAAAACTAAAGCAAGGACTCAAACTAGCAATGAGCATTTCAAGTGAAGGGAATGCATATCTGCAAGAAAGTCAGTTCTGGAAGCTTTACAAGGAAGATCAACCTCGCTGCTCCATTGTTATGAGAACTGCAGTGGGGCTAGTGCATCTTCTTGCTTGCTTATTAGAACCCTTCATGCCATCTTTTTCTGTTGAGGTATTTAAGCAGCTTAATTTGTCTCCTGAGACGCATATATCACTTTGTGATGATAAAGGCGATACTGATAGGGCAAGACGGCCATGGGAGATTGTACCTAGAGGTCACAAGATTGGGAAACCAGAGCCGTTGTTCAAGGAATTGAATGATGATGAAGTAGATTCTCTAAGGAAGAGGTTTGCTGGAAGTCAGGCGGATAGAAAGGAAAGGGAAGAAGCTGAAGCAGTGAAGTTGGCTGAGCAGCTCAAGAAATCAAAAGTTTCAGACAAGAGTGGAAAGAAGAAACAACAAGCAACAAAATCTGCAACTGAAGCAGAGATTTCCATATCTAGACTAGATATTCGTGTCGGCCTCATTACAAAAGCTCAGAAGCATCCTGATGCTGATGCACTTTATGTGGAAGAGATTGATGTCGGCGAAGGACAGCCTAGAACAGTTGTCAGTGGACTAGTCAGGTTTATACCTCTTGAAGAAATGCAGAATCGGAAGGTATGTGTCCTTTGCAACCTGAAGCCAGCGACCATGCGGGGTATTAAATCACAAGCAATGGTTCTTGCTGCTTCAAATAGTGACCACACCGCGGTTGAGTTGGTTGATCCGCCAAAATCTGCTCAAGTTGGGGAGAGAATTACATTTCCGGGGTTCCAAGGTGAGCCTGATGATGTGTTGAACCCCAAGAAGAAGGTTTGGGAAACCCTACAGGTAGATTTGCACAGTAACCCTGAGCTAGTCGCATGCTACAAAGATATTCCCCTCACTACATCAGCAGGTGTTTGCACTGTTAAATCTATTCGAGGTGGGTCAATTAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016070 GO:0019538 GO:0019752 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046686 GO:0050896 GO:0071704 GO:0090304 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00450 ko00970 map00450 map00970

Pfam Domains

Protein Families

Anticodon_1 tRNA-synt_1g tRNA_bind

Protein Analysis

836

Amino Acids

94.25

Weight (kDa)

6.39

Isoelectric Point (pI)

28.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1g	PF09334	22 - 416	4.9e-155	tRNA synthetases class I (M)
tRNA-synt_1	PF00133	24 - 265	1.1e-08	tRNA synthetases class I (I, L, M and V)
Anticodon_3	PF19303	481 - 630	4.2e-20	Anticodon binding domain of methionyl tRNA ligase
tRNA_bind	PF01588	680 - 775	1.6e-32	Putative tRNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001029)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13780
fragaria_vesca	FvH4_4g13560 FvH4_4g13560 FvH4_4g13560 FvH4_4g36101 FvH4_4g36103
malus_domestica	MD04G1013400.v1.1 MD05G1172700.v1.1 MD10G1161000.v1.1
prunus_persica	Prupe.1G159500_v2.0.a1 Prupe.1G159500_v2.0.a1 Prupe.1G159500_v2.0.a1 Prupe.2G130000_v2.0.a1 Prupe.2G130800_v2.0.a1 Prupe.8G200100_v2.0.a1 Prupe.8G200100_v2.0.a1
pyrus_communis	pycom04g01040 pycom05g15930 pycom10g13910
rosa_chinensis	RchiOBHm_Chr1g0332221 RchiOBHm_Chr2g0166871 RchiOBHm_Chr4g0414311 RchiOBHm_Chr4g0442441
rosa_laevigata	RLG00000005711 RLG00000008159 RLG00000021676
rosa_multiflora	Rmu_co8251943.1_g000001 Rmu_co8341625.1_g000001 Rmu_sc0000733.1_g000008 Rmu_sc0001063.1_g000003 Rmu_sc0002735.1_g000014 Rmu_sc0005196.1_g000006 Rmu_sc0005344.1_g000007 Rmu_sc0032860.1_g000001
rosa_roxburghii	Rroxscaffold_2G00084040 Rroxscaffold_2G00084460 Rroxscaffold_4G00318360 Rroxscaffold_5G00358180
rosa_rugosa	Rorug01G0098500 Rorug01G0098600 Rorug01G0098700 Rorug01G0098800 Rorug01G0098900 Rorug02G0526100 Rorug04G0126800
rosa_samantha	Rh1AG122600 Rh1BG093900 Rh1CG117200 Rh1DG128200 Rh2AG593100 Rh2BG604400 Rh2CG575300 Rh2DG616000 Rh4AG184800 Rh4BG184300 Rh4CG197700 Rh4DG181400 Rh4DG182000
rosa_wichuraiana	Rw1G010000 Rw2G049370 Rw4G015810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	283, 2456
AasI	GACNNNNNNGTC	1 cut(s)	1383
Acc36I	ACCTGC	2 cut(s)	283, 2456
AccB1I	GGYRCC	1 cut(s)	197
AccI	GTMKAC	1 cut(s)	593
AccII	CGCG	1 cut(s)	2279
AciI	CCGC	6 cut(s)	1181, 1892, 2224, 2277, 2279, 2297
AclWI	GGATC	6 cut(s)	563, 576, 774, 1347, 1427, 2288
AcoI	YGGCCR	2 cut(s)	52, 1778
AcsI	RAATTY	1 cut(s)	326
AcuI	CTGAAG	7 cut(s)	665, 787, 791, 1251, 1938, 2028, 2228
AcyI	GRCGYC	1 cut(s)	344
AdeI	CACNNNGTG	2 cut(s)	958, 1745
AfaI	GTAC	3 cut(s)	209, 299, 1794
AfiI	CCNNNNNNNGG	6 cut(s)	50, 110, 169, 491, 1336, 2278
AhlI	ACTAGT	1 cut(s)	2146
AjiI	CACGTC	1 cut(s)	480
AjnI	CCWGG	2 cut(s)	234, 1335
AjuI	GAANNNNNNNTTGG	2 cut(s)	638, 670
Alw26I	GTCTC	4 cut(s)	170, 218, 1721, 1725
AlwI	GGATC	6 cut(s)	563, 576, 774, 1347, 1427, 2288
Ama87I	CYCGRG	1 cut(s)	1151
AoxI	GGCC	6 cut(s)	31, 52, 1148, 1491, 1778, 2047
ApaI	GGGCCC	1 cut(s)	35
ApeKI	GCWGC	7 cut(s)	385, 421, 424, 1611, 1708, 1939, 2255
ApoI	RAATTY	1 cut(s)	326
ArsI	GACNNNNNNTTYG	2 cut(s)	2022, 2054
AseI	ATTAAT	1 cut(s)	669
Asp700I	GAANNNNTTC	1 cut(s)	1054
AspLEI	GCGC	3 cut(s)	80, 140, 838
AspS9I	GGNCC	5 cut(s)	31, 32, 999, 1149, 1271
AsuC2I	CCSGG	3 cut(s)	51, 170, 2337
AsuHPI	GGTGA	5 cut(s)	64, 970, 1001, 1314, 2360
AvaI	CYCGRG	1 cut(s)	1151
AvaII	GGWCC	2 cut(s)	999, 1271
BaeGI	GKGCMC	2 cut(s)	35, 485
BamHI	GGATCC	1 cut(s)	568
BanI	GGYRCC	1 cut(s)	197
BanII	GRGCYC	2 cut(s)	35, 1287
BbsI	GAAGAC	2 cut(s)	139, 1016
BbvI	GCAGC	7 cut(s)	372, 433, 436, 1598, 1720, 1951, 2242
BccI	CCATC	3 cut(s)	53, 1433, 1690
BceAI	ACGGC	5 cut(s)	70, 147, 226, 1793, 1810
BcgI	CGANNNNNNTGC	2 cut(s)	103, 137
BciT130I	CCWGG	2 cut(s)	236, 1337
BciVI	GTATCC	2 cut(s)	167, 1156
BcnI	CCSGG	3 cut(s)	51, 170, 2337
BcoDI	GTCTC	4 cut(s)	170, 218, 1721, 1725
BcuI	ACTAGT	1 cut(s)	2146
BfmI	CTRYAG	2 cut(s)	1632, 2396
BfoI	RGCGCY	1 cut(s)	141
BfuAI	ACCTGC	2 cut(s)	283, 2456
BfuI	GTATCC	2 cut(s)	167, 1156
BglII	AGATCT	1 cut(s)	261
BisI	GCNGC	7 cut(s)	386, 422, 425, 1612, 1709, 1940, 2256
BlpI	GCTNAGC	1 cut(s)	1935
BlsI	GCNGC	7 cut(s)	387, 423, 426, 1613, 1710, 1941, 2257
Bme1390I	CCNGG	5 cut(s)	51, 170, 236, 1337, 2337
Bme18I	GGWCC	2 cut(s)	999, 1271
BmeT110I	CYCGRG	1 cut(s)	1151
BmgBI	CACGTC	1 cut(s)	480
BmgT120I	GGNCC	5 cut(s)	31, 32, 999, 1149, 1271
BmiI	GGNNCC	7 cut(s)	33, 34, 199, 570, 698, 783, 2342
BmrFI	CCNGG	5 cut(s)	51, 170, 236, 1337, 2337
BmsI	GCATC	8 cut(s)	823, 1081, 1402, 1411, 1657, 2068, 2074, 2080
BpiI	GAAGAC	2 cut(s)	139, 1016
BpmI	CTGGAG	3 cut(s)	257, 410, 858
Bpu10I	CCTNAGC	1 cut(s)	2421
Bpu1102I	GCTNAGC	1 cut(s)	1935
BpuEI	CTTGAG	4 cut(s)	474, 1401, 1928, 2295
BpuMI	CCSGG	3 cut(s)	51, 170, 2337
BsaBI	GATNNNNATC	1 cut(s)	273
BsaHI	GRCGYC	1 cut(s)	344
BsaI	GGTCTC	1 cut(s)	218
BsaXI	ACNNNNNCTCC	6 cut(s)	230, 260, 464, 494, 875, 905
Bsc4I	CCNNNNNNNGG	6 cut(s)	50, 110, 169, 491, 1336, 2278
Bse1I	ACTGG	3 cut(s)	785, 991, 1363
Bse3DI	GCAATG	3 cut(s)	80, 1539, 2250
Bse8I	GATNNNNATC	1 cut(s)	273
BseBI	CCWGG	2 cut(s)	236, 1337
BseGI	GGATG	3 cut(s)	45, 913, 2071
BseJI	GATNNNNATC	1 cut(s)	273
BseLI	CCNNNNNNNGG	6 cut(s)	50, 110, 169, 491, 1336, 2278
BseMI	GCAATG	3 cut(s)	80, 1539, 2250
BseMII	CTCAG	7 cut(s)	148, 399, 745, 1716, 1926, 2078, 2412
BseNI	ACTGG	3 cut(s)	785, 991, 1363
BseRI	GAGGAG	2 cut(s)	254, 531
BseSI	GKGCMC	2 cut(s)	35, 485
BseXI	GCAGC	7 cut(s)	372, 433, 436, 1598, 1720, 1951, 2242
Bsh1236I	CGCG	1 cut(s)	2279
BshFI	GGCC	6 cut(s)	33, 54, 1150, 1493, 1780, 2049
BshNI	GGYRCC	1 cut(s)	197
BsiHKCI	CYCGRG	1 cut(s)	1151
BsiSI	CCGG	4 cut(s)	51, 169, 347, 2336
BslFI	GGGAC	3 cut(s)	86, 490, 821
BslI	CCNNNNNNNGG	6 cut(s)	50, 110, 169, 491, 1336, 2278
BsmAI	GTCTC	4 cut(s)	170, 218, 1721, 1725
BsmBI	CGTCTC	2 cut(s)	170, 1721
BsmFI	GGGAC	3 cut(s)	86, 490, 821
BsmI	GAATGC	2 cut(s)	709, 1561
BsnI	GGCC	6 cut(s)	33, 54, 1150, 1493, 1780, 2049
Bso31I	GGTCTC	1 cut(s)	218
BsoBI	CYCGRG	1 cut(s)	1151
Bsp120I	GGGCCC	1 cut(s)	31
Bsp1286I	GDGCHC	3 cut(s)	35, 485, 1287
Bsp143I	GATC	8 cut(s)	261, 520, 568, 766, 1339, 1432, 1600, 2293
Bsp1720I	GCTNAGC	1 cut(s)	1935
Bsp19I	CCATGG	2 cut(s)	1494, 1781
BspACI	CCGC	6 cut(s)	1181, 1892, 2224, 2277, 2279, 2297
BspANI	GGCC	6 cut(s)	33, 54, 1150, 1493, 1780, 2049
BspCNI	CTCAG	7 cut(s)	147, 400, 744, 1717, 1927, 2077, 2413
BspFNI	CGCG	1 cut(s)	2279
BspLI	GGNNCC	7 cut(s)	33, 34, 199, 570, 698, 783, 2342
BspMAI	CTGCAG	1 cut(s)	1636
BspMI	ACCTGC	2 cut(s)	283, 2456
BspPI	GGATC	6 cut(s)	563, 576, 774, 1347, 1427, 2288
BspT107I	GGYRCC	1 cut(s)	197
BspTNI	GGTCTC	1 cut(s)	218
BsrDI	GCAATG	3 cut(s)	80, 1539, 2250
BsrI	ACTGG	3 cut(s)	785, 991, 1363
BssMI	GATC	8 cut(s)	261, 520, 568, 766, 1339, 1432, 1600, 2293
BssNI	GRCGYC	1 cut(s)	344
BssT1I	CCWWGG	5 cut(s)	24, 255, 1494, 1781, 2344
Bst2UI	CCWGG	2 cut(s)	236, 1337
Bst6I	CTCTTC	3 cut(s)	654, 1865, 2094
BstACI	GRCGYC	1 cut(s)	344
BstAPI	GCANNNNNTGC	1 cut(s)	722
BstC8I	GCNNGC	5 cut(s)	154, 1191, 1660, 2214, 2434
BstDEI	CTNAG	8 cut(s)	134, 408, 731, 1725, 1865, 1935, 2064, 2421
BstDSI	CCRYGG	4 cut(s)	599, 1494, 1781, 2277
BstF5I	GGATG	3 cut(s)	45, 913, 2071
BstFNI	CGCG	1 cut(s)	2279
BstH2I	RGCGCY	1 cut(s)	141
BstHHI	GCGC	3 cut(s)	80, 140, 838
BstKTI	GATC	8 cut(s)	264, 523, 571, 769, 1342, 1435, 1603, 2296
BstMAI	GTCTC	4 cut(s)	170, 218, 1721, 1725
BstMBI	GATC	8 cut(s)	261, 520, 568, 766, 1339, 1432, 1600, 2293
BstMWI	GCNNNNNNNGC	5 cut(s)	713, 722, 1195, 1421, 2009
BstNI	CCWGG	2 cut(s)	236, 1337
BstNSI	RCATGY	1 cut(s)	2436
BstSCI	CCNGG	5 cut(s)	49, 168, 234, 1335, 2335
BstSFI	CTRYAG	2 cut(s)	1632, 2396
BstSLI	GKGCMC	2 cut(s)	35, 485
BstUI	CGCG	1 cut(s)	2279
BstV1I	GCAGC	7 cut(s)	372, 433, 436, 1598, 1720, 1951, 2242
BstV2I	GAAGAC	2 cut(s)	139, 1016
BstX2I	RGATCY	3 cut(s)	261, 568, 766
BstXI	CCANNNNNNTGG	1 cut(s)	235
BstYI	RGATCY	3 cut(s)	261, 568, 766
BsuI	GTATCC	2 cut(s)	167, 1156
BsuRI	GGCC	6 cut(s)	33, 54, 1150, 1493, 1780, 2049
BtgI	CCRYGG	4 cut(s)	599, 1494, 1781, 2277
BtrI	CACGTC	1 cut(s)	480
BtsCI	GGATG	3 cut(s)	45, 913, 2071
BtsI	GCAGTG	3 cut(s)	213, 1641, 1929
BtsIMutI	CAGTG	8 cut(s)	213, 530, 687, 1210, 1641, 1929, 2146, 2475
BveI	ACCTGC	2 cut(s)	283, 2456
Cac8I	GCNNGC	5 cut(s)	154, 1191, 1660, 2214, 2434
CfoI	GCGC	3 cut(s)	80, 140, 838
Cfr13I	GGNCC	5 cut(s)	31, 32, 999, 1149, 1271
Cfr42I	CCGCGG	1 cut(s)	2280
CseI	GACGC	2 cut(s)	352, 1738
Csp6I	GTAC	3 cut(s)	208, 298, 1793
CspCI	CAANNNNNGTGG	2 cut(s)	961, 996
CviAII	CATG	8 cut(s)	278, 794, 1176, 1495, 1678, 1782, 2221, 2433
CviQI	GTAC	3 cut(s)	208, 298, 1793
DdeI	CTNAG	8 cut(s)	134, 408, 731, 1725, 1865, 1935, 2064, 2421
DpnI	GATC	8 cut(s)	263, 522, 570, 768, 1341, 1434, 1602, 2295
DpnII	GATC	8 cut(s)	261, 520, 568, 766, 1339, 1432, 1600, 2293
DraI	TTTAAA	1 cut(s)	549
DraIII	CACNNNGTG	2 cut(s)	958, 1745
DrdI	GACNNNNNNGTC	1 cut(s)	1383
DseDI	GACNNNNNNGTC	1 cut(s)	1383
EaeI	YGGCCR	2 cut(s)	52, 1778
Eam1104I	CTCTTC	3 cut(s)	654, 1865, 2094
EarI	CTCTTC	3 cut(s)	654, 1865, 2094
EciI	GGCGGA	3 cut(s)	1196, 1907, 2286
Eco130I	CCWWGG	5 cut(s)	24, 255, 1494, 1781, 2344
Eco24I	GRGCYC	2 cut(s)	35, 1287
Eco31I	GGTCTC	1 cut(s)	218
Eco47I	GGWCC	2 cut(s)	999, 1271
Eco57I	CTGAAG	7 cut(s)	665, 787, 791, 1251, 1938, 2028, 2228
Eco88I	CYCGRG	1 cut(s)	1151
EcoO109I	RGGNCCY	2 cut(s)	31, 32
EcoRII	CCWGG	2 cut(s)	234, 1335
EcoT14I	CCWWGG	5 cut(s)	24, 255, 1494, 1781, 2344
EcoT22I	ATGCAT	1 cut(s)	1561
EcoT38I	GRGCYC	2 cut(s)	35, 1287
ErhI	CCWWGG	5 cut(s)	24, 255, 1494, 1781, 2344
Esp3I	CGTCTC	2 cut(s)	170, 1721
FaeI	CATG	8 cut(s)	281, 797, 1179, 1498, 1681, 1785, 2224, 2436
FaqI	GGGAC	3 cut(s)	86, 490, 821
FatI	CATG	8 cut(s)	277, 793, 1175, 1494, 1677, 1781, 2220, 2432
FauI	CCCGC	1 cut(s)	2217
FblI	GTMKAC	1 cut(s)	593
Fnu4HI	GCNGC	7 cut(s)	386, 422, 425, 1612, 1709, 1940, 2256
FokI	GGATG	3 cut(s)	32, 920, 2058
FriOI	GRGCYC	2 cut(s)	35, 1287
Fsp4HI	GCNGC	7 cut(s)	386, 422, 425, 1612, 1709, 1940, 2256
GlaI	GCGC	3 cut(s)	79, 139, 837
GluI	GCNGC	7 cut(s)	386, 422, 425, 1612, 1709, 1940, 2256
GsuI	CTGGAG	3 cut(s)	257, 410, 858
HaeII	RGCGCY	1 cut(s)	141
HaeIII	GGCC	6 cut(s)	33, 54, 1150, 1493, 1780, 2049
HapII	CCGG	4 cut(s)	51, 169, 347, 2336
HgaI	GACGC	2 cut(s)	352, 1738
HhaI	GCGC	3 cut(s)	80, 140, 838
Hin1I	GRCGYC	1 cut(s)	344
Hin1II	CATG	8 cut(s)	281, 797, 1179, 1498, 1681, 1785, 2224, 2436
Hin6I	GCGC	3 cut(s)	78, 138, 836
HinP1I	GCGC	3 cut(s)	78, 138, 836
HincII	GTYRAC	3 cut(s)	94, 594, 1368
HindII	GTYRAC	3 cut(s)	94, 594, 1368
HindIII	AAGCTT	3 cut(s)	542, 1297, 1586
HinfI	GANTC	8 cut(s)	283, 595, 604, 898, 1397, 1521, 1859, 2179
HpaII	CCGG	4 cut(s)	51, 169, 347, 2336
HphI	GGTGA	5 cut(s)	64, 970, 1001, 1314, 2360
Hpy166II	GTNNAC	5 cut(s)	94, 298, 594, 1368, 2144
Hpy188I	TCNGA	9 cut(s)	409, 573, 734, 771, 1162, 1432, 1963, 2067, 2184
Hpy8I	GTNNAC	5 cut(s)	94, 298, 594, 1368, 2144
Hpy99I	CGWCG	1 cut(s)	346
HpyCH4IV	ACGT	3 cut(s)	63, 99, 479
HpyF10VI	GCNNNNNNNGC	5 cut(s)	713, 722, 1195, 1421, 2009
HpyF3I	CTNAG	8 cut(s)	134, 408, 731, 1725, 1865, 1935, 2064, 2421
HpySE526I	ACGT	3 cut(s)	63, 99, 479
Hsp92I	GRCGYC	1 cut(s)	344
Hsp92II	CATG	8 cut(s)	281, 797, 1179, 1498, 1681, 1785, 2224, 2436
HspAI	GCGC	3 cut(s)	78, 138, 836
KspI	CCGCGG	1 cut(s)	2280
Kzo9I	GATC	8 cut(s)	261, 520, 568, 766, 1339, 1432, 1600, 2293
LmnI	GCTCC	5 cut(s)	45, 349, 696, 1477, 1619
Lsp1109I	GCAGC	7 cut(s)	372, 433, 436, 1598, 1720, 1951, 2242
LweI	GCATC	8 cut(s)	823, 1081, 1402, 1411, 1657, 2068, 2074, 2080
MaeII	ACGT	3 cut(s)	63, 99, 479
MaeIII	GTNAC	5 cut(s)	16, 1021, 1802, 2267, 2414
MalI	GATC	8 cut(s)	263, 522, 570, 768, 1341, 1434, 1602, 2295
MboI	GATC	8 cut(s)	261, 520, 568, 766, 1339, 1432, 1600, 2293
MflI	RGATCY	3 cut(s)	261, 568, 766
MhlI	GDGCHC	3 cut(s)	35, 485, 1287
MlyI	GAGTC	3 cut(s)	589, 1391, 1515
MmeI	TCCRAC	2 cut(s)	636, 1140
Mph1103I	ATGCAT	1 cut(s)	1561
MroXI	GAANNNNTTC	1 cut(s)	1054
MslI	CAYNNNNRTG	3 cut(s)	959, 1622, 2076
MspA1I	CMGCKG	1 cut(s)	2279
MspI	CCGG	4 cut(s)	51, 169, 347, 2336
MspR9I	CCNGG	5 cut(s)	51, 170, 236, 1337, 2337
Mva1269I	GAATGC	2 cut(s)	709, 1561
MvaI	CCWGG	2 cut(s)	236, 1337
MvnI	CGCG	1 cut(s)	2279
MwoI	GCNNNNNNNGC	5 cut(s)	713, 722, 1195, 1421, 2009
NciI	CCSGG	3 cut(s)	51, 170, 2337
NcoI	CCATGG	2 cut(s)	1494, 1781
NdeII	GATC	8 cut(s)	261, 520, 568, 766, 1339, 1432, 1600, 2293
NlaIII	CATG	8 cut(s)	281, 797, 1179, 1498, 1681, 1785, 2224, 2436
NlaIV	GGNNCC	7 cut(s)	33, 34, 199, 570, 698, 783, 2342
NmeAIII	GCCGAG	1 cut(s)	90
NmuCI	GTSAC	2 cut(s)	1802, 2267
NsiI	ATGCAT	1 cut(s)	1561
NspI	RCATGY	1 cut(s)	2436
PaeI	GCATGC	1 cut(s)	2436
PaqCI	CACCTGC	2 cut(s)	283, 2456
PcsI	WCGNNNNNNNCGW	1 cut(s)	160
PctI	GAATGC	2 cut(s)	709, 1561
PdmI	GAANNNNTTC	1 cut(s)	1054
PfeI	GAWTC	5 cut(s)	283, 604, 898, 1859, 2179
PkrI	GCNGC	7 cut(s)	387, 423, 426, 1613, 1710, 1941, 2257
PleI	GAGTC	3 cut(s)	589, 1391, 1515
PpsI	GAGTC	3 cut(s)	589, 1391, 1515
PshBI	ATTAAT	1 cut(s)	669
Psp6I	CCWGG	2 cut(s)	234, 1335
PspGI	CCWGG	2 cut(s)	234, 1335
PspN4I	GGNNCC	7 cut(s)	33, 34, 199, 570, 698, 783, 2342
PspOMI	GGGCCC	1 cut(s)	31
PspPI	GGNCC	5 cut(s)	31, 32, 999, 1149, 1271
PsrI	GAACNNNNNNTAC	2 cut(s)	290, 322
PstI	CTGCAG	1 cut(s)	1636
PsuI	RGATCY	3 cut(s)	261, 568, 766
RsaI	GTAC	3 cut(s)	209, 299, 1794
RsaNI	GTAC	3 cut(s)	208, 298, 1793
RseI	CAYNNNNRTG	3 cut(s)	959, 1622, 2076
SacII	CCGCGG	1 cut(s)	2280
SalI	GTCGAC	1 cut(s)	592
SatI	GCNGC	7 cut(s)	386, 422, 425, 1612, 1709, 1940, 2256
Sau3AI	GATC	8 cut(s)	261, 520, 568, 766, 1339, 1432, 1600, 2293
Sau96I	GGNCC	5 cut(s)	31, 32, 999, 1149, 1271
SchI	GAGTC	3 cut(s)	589, 1391, 1515
ScrFI	CCNGG	5 cut(s)	51, 170, 236, 1337, 2337
SduI	GDGCHC	3 cut(s)	35, 485, 1287
SfaNI	GCATC	8 cut(s)	823, 1081, 1402, 1411, 1657, 2068, 2074, 2080
SfcI	CTRYAG	2 cut(s)	1632, 2396
Sfr303I	CCGCGG	1 cut(s)	2280
SgrBI	CCGCGG	1 cut(s)	2280
SinI	GGWCC	2 cut(s)	999, 1271
SmiMI	CAYNNNNRTG	3 cut(s)	959, 1622, 2076
SmlI	CTYRAG	4 cut(s)	489, 1416, 1943, 2310
SmoI	CTYRAG	4 cut(s)	489, 1416, 1943, 2310
SpeI	ACTAGT	1 cut(s)	2146
SphI	GCATGC	1 cut(s)	2436
SsiI	CCGC	6 cut(s)	1181, 1892, 2224, 2277, 2279, 2297
StyD4I	CCNGG	5 cut(s)	49, 168, 234, 1335, 2335
StyI	CCWWGG	5 cut(s)	24, 255, 1494, 1781, 2344
TaiI	ACGT	3 cut(s)	66, 102, 482
TaqI	TCGA	3 cut(s)	341, 593, 2491
TfiI	GAWTC	5 cut(s)	283, 604, 898, 1859, 2179
TscAI	CASTG	8 cut(s)	220, 530, 687, 1210, 1641, 1929, 2146, 2482
TseFI	GTSAC	2 cut(s)	1802, 2267
TseI	GCWGC	7 cut(s)	385, 421, 424, 1611, 1708, 1939, 2255
Tsp45I	GTSAC	2 cut(s)	1802, 2267
TspDTI	ATGAA	6 cut(s)	275, 1022, 1056, 1222, 1666, 1866
TspGWI	ACGGA	2 cut(s)	371, 616
TspRI	CASTG	8 cut(s)	220, 530, 687, 1210, 1641, 1929, 2146, 2482
VpaK11BI	GGWCC	2 cut(s)	999, 1271
VspI	ATTAAT	1 cut(s)	669
XapI	RAATTY	1 cut(s)	326
XbaI	TCTAGA	1 cut(s)	2027
XceI	RCATGY	1 cut(s)	2436
XmiI	GTMKAC	1 cut(s)	593
XmnI	GAANNNNTTC	1 cut(s)	1054
Zsp2I	ATGCAT	1 cut(s)	1561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.