Reverse transcriptase-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G61090 AT5G61090 AT5G61120 AT5G61120 AT5G61120 |
| fragaria_vesca | FvH4_4g13540 FvH4_4g13550 FvH4_5g13930 FvH4_5g13940 FvH4_5g13940 FvH4_5g13940 |
| malus_domestica | MD06G1202200.v1.1 MD14G1211300.v1.1 |
| prunus_persica | Prupe.5G204200_v2.0.a1 Prupe.5G204200_v2.0.a1 Prupe.5G204400_v2.0.a1 |
| pyrus_communis | pycom06g17820 |
| rosa_chinensis | RchiOBHm_Chr4g0414551 RchiOBHm_Chr4g0414561 RchiOBHm_Chr4g0414571 RchiOBHm_Chr7g0183021 |
| rosa_laevigata | RLG00000005087 |
| rosa_multiflora | Rmu_co8299331.1_g000001 Rmu_sc0000808.1_g000022 Rmu_sc0001063.1_g000013 Rmu_sc0005196.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00240320 Rroxscaffold_3G00240450 Rroxscaffold_3G00270840 |
| rosa_rugosa | Rorug06G0451800 |
| rosa_samantha | Rh4AG186600 Rh4AG186700 Rh4BG173800 Rh4BG184200 Rh4CG197200 Rh4CG197500 Rh4DG181800 Rh4DG181900 Rh4DG183300 Rh7AG055300 Rh7AG324400 Rh7BG054700 Rh7BG309400 Rh7CG056000 Rh7CG341300 Rh7DG054800 |
| rosa_wichuraiana | Rw4G015750 Rw7G027480 Rw7G028300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 1926 |
| Acc36I | ACCTGC | 1 cut(s) | 560 |
| AccB1I | GGYRCC | 1 cut(s) | 1614 |
| AccII | CGCG | 1 cut(s) | 1393 |
| AciI | CCGC | 6 cut(s) | 176, 230, 902, 1391, 1689, 1957 |
| AcoI | YGGCCR | 1 cut(s) | 1158 |
| AcsI | RAATTY | 2 cut(s) | 699, 741 |
| AcuI | CTGAAG | 6 cut(s) | 6, 267, 411, 555, 1424, 1653 |
| AcvI | CACGTG | 1 cut(s) | 689 |
| AfaI | GTAC | 6 cut(s) | 216, 396, 468, 1073, 1473, 1607 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 445, 481, 517, 569, 948, 1396, 1928 |
| AflIII | ACRYGT | 1 cut(s) | 223 |
| AjnI | CCWGG | 3 cut(s) | 7, 43, 1477 |
| Alw26I | GTCTC | 7 cut(s) | 448, 484, 520, 625, 656, 820, 1706 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 818, 1316 |
| Ama87I | CYCGRG | 1 cut(s) | 1926 |
| AoxI | GGCC | 4 cut(s) | 957, 1158, 1666, 1930 |
| ApeKI | GCWGC | 4 cut(s) | 124, 566, 725, 1964 |
| ApoI | RAATTY | 2 cut(s) | 699, 741 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1529, 1561 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 840, 1005 |
| AspS9I | GGNCC | 1 cut(s) | 958 |
| AsuC2I | CCSGG | 1 cut(s) | 266 |
| AsuHPI | GGTGA | 4 cut(s) | 130, 1434, 1465, 1522 |
| AvaI | CYCGRG | 1 cut(s) | 1926 |
| BalI | TGGCCA | 1 cut(s) | 1160 |
| BanI | GGYRCC | 1 cut(s) | 1614 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1455, 1487 |
| BauI | CACGAG | 1 cut(s) | 198 |
| BbrPI | CACGTG | 1 cut(s) | 689 |
| BbsI | GAAGAC | 1 cut(s) | 590 |
| BbvI | GCAGC | 3 cut(s) | 111, 578, 737 |
| BccI | CCATC | 1 cut(s) | 1340 |
| BceAI | ACGGC | 1 cut(s) | 1192 |
| BciT130I | CCWGG | 3 cut(s) | 9, 45, 1479 |
| BcnI | CCSGG | 1 cut(s) | 266 |
| BcoDI | GTCTC | 7 cut(s) | 448, 484, 520, 625, 656, 820, 1706 |
| BfaI | CTAG | 3 cut(s) | 105, 1298, 1784 |
| BfmI | CTRYAG | 4 cut(s) | 426, 462, 498, 564 |
| BfuAI | ACCTGC | 1 cut(s) | 560 |
| BglII | AGATCT | 1 cut(s) | 257 |
| BisI | GCNGC | 5 cut(s) | 125, 567, 726, 902, 1965 |
| BlsI | GCNGC | 5 cut(s) | 126, 568, 727, 903, 1966 |
| Bme1390I | CCNGG | 4 cut(s) | 9, 45, 266, 1479 |
| BmeT110I | CYCGRG | 1 cut(s) | 1926 |
| BmgT120I | GGNCC | 1 cut(s) | 958 |
| BmiI | GGNNCC | 2 cut(s) | 793, 1616 |
| BmrFI | CCNGG | 4 cut(s) | 9, 45, 266, 1479 |
| BmsI | GCATC | 3 cut(s) | 548, 947, 1635 |
| BpiI | GAAGAC | 1 cut(s) | 590 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 226, 258, 628, 660 |
| BpmI | CTGGAG | 4 cut(s) | 168, 180, 1265, 1967 |
| BpuEI | CTTGAG | 4 cut(s) | 195, 977, 1420, 1881 |
| BpuMI | CCSGG | 1 cut(s) | 266 |
| BsaAI | YACGTR | 1 cut(s) | 689 |
| BsaJI | CCNNGG | 2 cut(s) | 1506, 1663 |
| BsaWI | WCCGGW | 1 cut(s) | 1444 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 162, 192, 1205, 1235, 1805, 1823, 1835, 1853 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 445, 481, 517, 569, 948, 1396, 1928 |
| Bse118I | RCCGGY | 1 cut(s) | 934 |
| Bse1I | ACTGG | 3 cut(s) | 80, 185, 626 |
| Bse3DI | GCAATG | 3 cut(s) | 172, 984, 1143 |
| BseBI | CCWGG | 3 cut(s) | 9, 45, 1479 |
| BseDI | CCNNGG | 2 cut(s) | 1506, 1663 |
| BseGI | GGATG | 4 cut(s) | 451, 487, 938, 1626 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 445, 481, 517, 569, 948, 1396, 1928 |
| BseMI | GCAATG | 3 cut(s) | 172, 984, 1143 |
| BseMII | CTCAG | 5 cut(s) | 50, 810, 872, 897, 976 |
| BseNI | ACTGG | 3 cut(s) | 80, 185, 626 |
| BseRI | GAGGAG | 2 cut(s) | 1189, 1914 |
| BseXI | GCAGC | 3 cut(s) | 111, 578, 737 |
| BseYI | CCCAGC | 4 cut(s) | 301, 373, 434, 1643 |
| BsgI | GTGCAG | 1 cut(s) | 1881 |
| Bsh1236I | CGCG | 1 cut(s) | 1393 |
| BshFI | GGCC | 4 cut(s) | 959, 1160, 1668, 1932 |
| BshNI | GGYRCC | 1 cut(s) | 1614 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1926 |
| BsiSI | CCGG | 4 cut(s) | 134, 266, 935, 1445 |
| BslFI | GGGAC | 7 cut(s) | 212, 248, 284, 356, 392, 1697, 1741 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 445, 481, 517, 569, 948, 1396, 1928 |
| BsmAI | GTCTC | 7 cut(s) | 448, 484, 520, 625, 656, 820, 1706 |
| BsmFI | GGGAC | 7 cut(s) | 212, 248, 284, 356, 392, 1697, 1741 |
| BsmI | GAATGC | 1 cut(s) | 1385 |
| BsnI | GGCC | 4 cut(s) | 959, 1160, 1668, 1932 |
| BsoBI | CYCGRG | 1 cut(s) | 1926 |
| Bsp143I | GATC | 9 cut(s) | 30, 257, 784, 809, 1439, 1549, 1559, 1728, 1880 |
| BspACI | CCGC | 6 cut(s) | 176, 230, 902, 1391, 1689, 1957 |
| BspANI | GGCC | 4 cut(s) | 959, 1160, 1668, 1932 |
| BspCNI | CTCAG | 5 cut(s) | 51, 811, 871, 898, 975 |
| BspFNI | CGCG | 1 cut(s) | 1393 |
| BspLI | GGNNCC | 2 cut(s) | 793, 1616 |
| BspMAI | CTGCAG | 1 cut(s) | 568 |
| BspMI | ACCTGC | 1 cut(s) | 560 |
| BspT107I | GGYRCC | 1 cut(s) | 1614 |
| BsrDI | GCAATG | 3 cut(s) | 172, 984, 1143 |
| BsrFI | RCCGGY | 1 cut(s) | 934 |
| BsrI | ACTGG | 3 cut(s) | 80, 185, 626 |
| BssAI | RCCGGY | 1 cut(s) | 934 |
| BssECI | CCNNGG | 2 cut(s) | 1506, 1663 |
| BssMI | GATC | 9 cut(s) | 30, 257, 784, 809, 1439, 1549, 1559, 1728, 1880 |
| BssSI | CACGAG | 1 cut(s) | 198 |
| BssT1I | CCWWGG | 2 cut(s) | 1506, 1663 |
| Bst2BI | CACGAG | 1 cut(s) | 198 |
| Bst2UI | CCWGG | 3 cut(s) | 9, 45, 1479 |
| Bst6I | CTCTTC | 1 cut(s) | 574 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 731, 983 |
| BstBAI | YACGTR | 1 cut(s) | 689 |
| BstC8I | GCNNGC | 3 cut(s) | 195, 984, 1792 |
| BstDEI | CTNAG | 7 cut(s) | 59, 663, 819, 858, 906, 962, 1369 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 567, 1926 |
| BstF5I | GGATG | 4 cut(s) | 451, 487, 938, 1626 |
| BstFNI | CGCG | 1 cut(s) | 1393 |
| BstKTI | GATC | 9 cut(s) | 33, 260, 787, 812, 1442, 1552, 1562, 1731, 1883 |
| BstMAI | GTCTC | 7 cut(s) | 448, 484, 520, 625, 656, 820, 1706 |
| BstMBI | GATC | 9 cut(s) | 30, 257, 784, 809, 1439, 1549, 1559, 1728, 1880 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 130, 563, 731, 983, 1623 |
| BstNI | CCWGG | 3 cut(s) | 9, 45, 1479 |
| BstNSI | RCATGY | 2 cut(s) | 1017, 1121 |
| BstSCI | CCNGG | 4 cut(s) | 7, 43, 264, 1477 |
| BstSFI | CTRYAG | 4 cut(s) | 426, 462, 498, 564 |
| BstUI | CGCG | 1 cut(s) | 1393 |
| BstV1I | GCAGC | 3 cut(s) | 111, 578, 737 |
| BstV2I | GAAGAC | 1 cut(s) | 590 |
| BstX2I | RGATCY | 1 cut(s) | 257 |
| BstYI | RGATCY | 1 cut(s) | 257 |
| BsuRI | GGCC | 4 cut(s) | 959, 1160, 1668, 1932 |
| BtsCI | GGATG | 4 cut(s) | 451, 487, 938, 1626 |
| BtsIMutI | CAGTG | 2 cut(s) | 633, 1179 |
| BveI | ACCTGC | 1 cut(s) | 560 |
| Cac8I | GCNNGC | 3 cut(s) | 195, 984, 1792 |
| CaiI | CAGNNNCTG | 2 cut(s) | 818, 1316 |
| Cfr10I | RCCGGY | 1 cut(s) | 934 |
| Cfr13I | GGNCC | 1 cut(s) | 958 |
| CseI | GACGC | 1 cut(s) | 888 |
| Csp6I | GTAC | 6 cut(s) | 215, 395, 467, 1072, 1472, 1606 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 675, 710 |
| CviAII | CATG | 7 cut(s) | 788, 1014, 1118, 1156, 1363, 1801, 1857 |
| CviQI | GTAC | 6 cut(s) | 215, 395, 467, 1072, 1472, 1606 |
| DdeI | CTNAG | 7 cut(s) | 59, 663, 819, 858, 906, 962, 1369 |
| DpnI | GATC | 9 cut(s) | 32, 259, 786, 811, 1441, 1551, 1561, 1730, 1882 |
| DpnII | GATC | 9 cut(s) | 30, 257, 784, 809, 1439, 1549, 1559, 1728, 1880 |
| EaeI | YGGCCR | 1 cut(s) | 1158 |
| Eam1104I | CTCTTC | 1 cut(s) | 574 |
| EarI | CTCTTC | 1 cut(s) | 574 |
| Eco130I | CCWWGG | 2 cut(s) | 1506, 1663 |
| Eco147I | AGGCCT | 2 cut(s) | 1668, 1932 |
| Eco57I | CTGAAG | 6 cut(s) | 6, 267, 411, 555, 1424, 1653 |
| Eco72I | CACGTG | 1 cut(s) | 689 |
| Eco88I | CYCGRG | 1 cut(s) | 1926 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 567, 1926 |
| EcoO109I | RGGNCCY | 1 cut(s) | 958 |
| EcoRII | CCWGG | 3 cut(s) | 7, 43, 1477 |
| EcoT14I | CCWWGG | 2 cut(s) | 1506, 1663 |
| ErhI | CCWWGG | 2 cut(s) | 1506, 1663 |
| FaeI | CATG | 7 cut(s) | 791, 1017, 1121, 1159, 1366, 1804, 1860 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 1944 |
| FaqI | GGGAC | 7 cut(s) | 212, 248, 284, 356, 392, 1697, 1741 |
| FatI | CATG | 7 cut(s) | 787, 1013, 1117, 1155, 1362, 1800, 1856 |
| FauI | CCCGC | 2 cut(s) | 237, 1398 |
| Fnu4HI | GCNGC | 5 cut(s) | 125, 567, 726, 902, 1965 |
| FokI | GGATG | 4 cut(s) | 438, 474, 925, 1613 |
| Fsp4HI | GCNGC | 5 cut(s) | 125, 567, 726, 902, 1965 |
| FspBI | CTAG | 3 cut(s) | 105, 1298, 1784 |
| GluI | GCNGC | 5 cut(s) | 125, 567, 726, 902, 1965 |
| GsaI | CCCAGC | 4 cut(s) | 305, 377, 438, 1647 |
| GsuI | CTGGAG | 4 cut(s) | 168, 180, 1265, 1967 |
| HaeIII | GGCC | 4 cut(s) | 959, 1160, 1668, 1932 |
| HapII | CCGG | 4 cut(s) | 134, 266, 935, 1445 |
| HgaI | GACGC | 1 cut(s) | 888 |
| Hin1II | CATG | 7 cut(s) | 791, 1017, 1121, 1159, 1366, 1804, 1860 |
| HincII | GTYRAC | 1 cut(s) | 1360 |
| HindII | GTYRAC | 1 cut(s) | 1360 |
| HindIII | AAGCTT | 2 cut(s) | 1406, 1720 |
| HpaII | CCGG | 4 cut(s) | 134, 266, 935, 1445 |
| HphI | GGTGA | 4 cut(s) | 130, 1434, 1465, 1522 |
| Hpy166II | GTNNAC | 4 cut(s) | 686, 1107, 1360, 1472 |
| Hpy8I | GTNNAC | 4 cut(s) | 686, 1107, 1360, 1472 |
| Hpy99I | CGWCG | 1 cut(s) | 810 |
| HpyAV | CCTTC | 5 cut(s) | 30, 949, 1444, 1450, 1804 |
| HpyCH4IV | ACGT | 4 cut(s) | 223, 688, 805, 967 |
| HpyCH4V | TGCA | 8 cut(s) | 203, 566, 594, 697, 734, 1794, 1862, 1964 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 130, 563, 731, 983, 1623 |
| HpyF3I | CTNAG | 7 cut(s) | 59, 663, 819, 858, 906, 962, 1369 |
| HpySE526I | ACGT | 4 cut(s) | 223, 688, 805, 967 |
| Hsp92II | CATG | 7 cut(s) | 791, 1017, 1121, 1159, 1366, 1804, 1860 |
| Kzo9I | GATC | 9 cut(s) | 30, 257, 784, 809, 1439, 1549, 1559, 1728, 1880 |
| LmnI | GCTCC | 1 cut(s) | 1787 |
| Lsp1109I | GCAGC | 3 cut(s) | 111, 578, 737 |
| LweI | GCATC | 3 cut(s) | 548, 947, 1635 |
| MaeI | CTAG | 3 cut(s) | 105, 1298, 1784 |
| MaeII | ACGT | 4 cut(s) | 223, 688, 805, 967 |
| MaeIII | GTNAC | 5 cut(s) | 334, 987, 1141, 1577, 1823 |
| MalI | GATC | 9 cut(s) | 32, 259, 786, 811, 1441, 1551, 1561, 1730, 1882 |
| MboI | GATC | 9 cut(s) | 30, 257, 784, 809, 1439, 1549, 1559, 1728, 1880 |
| MboII | GAAGA | 9 cut(s) | 63, 590, 591, 836, 1102, 1258, 1501, 1710, 1898 |
| MflI | RGATCY | 1 cut(s) | 257 |
| MlsI | TGGCCA | 1 cut(s) | 1160 |
| MluNI | TGGCCA | 1 cut(s) | 1160 |
| MlyI | GAGTC | 3 cut(s) | 13, 244, 406 |
| MmeI | TCCRAC | 6 cut(s) | 122, 335, 371, 479, 515, 819 |
| Mox20I | TGGCCA | 1 cut(s) | 1160 |
| MroXI | GAANNNNTTC | 2 cut(s) | 840, 1005 |
| MscI | TGGCCA | 1 cut(s) | 1160 |
| MseI | TTAA | 5 cut(s) | 189, 657, 714, 1190, 1518 |
| Msp20I | TGGCCA | 1 cut(s) | 1160 |
| MspA1I | CMGCKG | 1 cut(s) | 1689 |
| MspI | CCGG | 4 cut(s) | 134, 266, 935, 1445 |
| MspR9I | CCNGG | 4 cut(s) | 9, 45, 266, 1479 |
| Mva1269I | GAATGC | 1 cut(s) | 1385 |
| MvaI | CCWGG | 3 cut(s) | 9, 45, 1479 |
| MvnI | CGCG | 1 cut(s) | 1393 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 130, 563, 731, 983, 1623 |
| NciI | CCSGG | 1 cut(s) | 266 |
| NdeII | GATC | 9 cut(s) | 30, 257, 784, 809, 1439, 1549, 1559, 1728, 1880 |
| NlaIII | CATG | 7 cut(s) | 791, 1017, 1121, 1159, 1366, 1804, 1860 |
| NlaIV | GGNNCC | 2 cut(s) | 793, 1616 |
| NmeAIII | GCCGAG | 3 cut(s) | 258, 425, 497 |
| NmuCI | GTSAC | 3 cut(s) | 334, 1577, 1823 |
| NspI | RCATGY | 2 cut(s) | 1017, 1121 |
| PaeR7I | CTCGAG | 1 cut(s) | 1926 |
| PceI | AGGCCT | 2 cut(s) | 1668, 1932 |
| PctI | GAATGC | 1 cut(s) | 1385 |
| PdmI | GAANNNNTTC | 2 cut(s) | 840, 1005 |
| PfeI | GAWTC | 7 cut(s) | 26, 68, 94, 862, 890, 1418, 1701 |
| PkrI | GCNGC | 5 cut(s) | 126, 568, 727, 903, 1966 |
| PleI | GAGTC | 3 cut(s) | 12, 243, 406 |
| PmaCI | CACGTG | 1 cut(s) | 689 |
| PmlI | CACGTG | 1 cut(s) | 689 |
| PpsI | GAGTC | 3 cut(s) | 12, 243, 406 |
| Ppu21I | YACGTR | 1 cut(s) | 689 |
| Psp6I | CCWGG | 3 cut(s) | 7, 43, 1477 |
| PspCI | CACGTG | 1 cut(s) | 689 |
| PspFI | CCCAGC | 4 cut(s) | 301, 373, 434, 1643 |
| PspGI | CCWGG | 3 cut(s) | 7, 43, 1477 |
| PspN4I | GGNNCC | 2 cut(s) | 793, 1616 |
| PspPI | GGNCC | 1 cut(s) | 958 |
| PspXI | VCTCGAGB | 1 cut(s) | 1926 |
| PstI | CTGCAG | 1 cut(s) | 568 |
| PstNI | CAGNNNCTG | 2 cut(s) | 818, 1316 |
| PsuI | RGATCY | 1 cut(s) | 257 |
| RsaI | GTAC | 6 cut(s) | 216, 396, 468, 1073, 1473, 1607 |
| RsaNI | GTAC | 6 cut(s) | 215, 395, 467, 1072, 1472, 1606 |
| SaqAI | TTAA | 5 cut(s) | 189, 657, 714, 1190, 1518 |
| SatI | GCNGC | 5 cut(s) | 125, 567, 726, 902, 1965 |
| Sau3AI | GATC | 9 cut(s) | 30, 257, 784, 809, 1439, 1549, 1559, 1728, 1880 |
| Sau96I | GGNCC | 1 cut(s) | 958 |
| SchI | GAGTC | 3 cut(s) | 13, 244, 406 |
| ScrFI | CCNGG | 4 cut(s) | 9, 45, 266, 1479 |
| SfaNI | GCATC | 3 cut(s) | 548, 947, 1635 |
| SfcI | CTRYAG | 4 cut(s) | 426, 462, 498, 564 |
| Sfr274I | CTCGAG | 1 cut(s) | 1926 |
| SlaI | CTCGAG | 1 cut(s) | 1926 |
| SmlI | CTYRAG | 5 cut(s) | 210, 992, 1435, 1896, 1926 |
| SmoI | CTYRAG | 5 cut(s) | 210, 992, 1435, 1896, 1926 |
| SseBI | AGGCCT | 2 cut(s) | 1668, 1932 |
| SsiI | CCGC | 6 cut(s) | 176, 230, 902, 1391, 1689, 1957 |
| SspI | AATATT | 1 cut(s) | 1194 |
| SspMI | CTAG | 3 cut(s) | 105, 1298, 1784 |
| StuI | AGGCCT | 2 cut(s) | 1668, 1932 |
| StyD4I | CCNGG | 4 cut(s) | 7, 43, 264, 1477 |
| StyI | CCWWGG | 2 cut(s) | 1506, 1663 |
| TaiI | ACGT | 4 cut(s) | 226, 691, 808, 970 |
| TaqI | TCGA | 8 cut(s) | 29, 238, 601, 808, 999, 1065, 1485, 1927 |
| TatI | WGTACW | 1 cut(s) | 394 |
| TauI | GCSGC | 1 cut(s) | 904 |
| TfiI | GAWTC | 7 cut(s) | 26, 68, 94, 862, 890, 1418, 1701 |
| Tru1I | TTAA | 5 cut(s) | 189, 657, 714, 1190, 1518 |
| Tru9I | TTAA | 5 cut(s) | 189, 657, 714, 1190, 1518 |
| TscAI | CASTG | 2 cut(s) | 633, 1186 |
| TseFI | GTSAC | 3 cut(s) | 334, 1577, 1823 |
| TseI | GCWGC | 4 cut(s) | 124, 566, 725, 1964 |
| Tsp45I | GTSAC | 3 cut(s) | 334, 1577, 1823 |
| TspDTI | ATGAA | 3 cut(s) | 161, 476, 1392 |
| TspGWI | ACGGA | 1 cut(s) | 891 |
| TspRI | CASTG | 2 cut(s) | 633, 1186 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 567, 1926 |
| XapI | RAATTY | 2 cut(s) | 699, 741 |
| XceI | RCATGY | 2 cut(s) | 1017, 1121 |
| XhoI | CTCGAG | 1 cut(s) | 1926 |
| XmnI | GAANNNNTTC | 2 cut(s) | 840, 1005 |
| XspI | CTAG | 3 cut(s) | 105, 1298, 1784 |