Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0001576

Physical Location & Seq

Genomic Coordinates Forward (+)

10232920 .. 10237382

Gene Structure 4463 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g17590.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1389 bp

ATGGCGGAGCTAAAGCTCTCGGAGAGCCGAGACCTGACCCGAATAGAGCGCATAGGCGCTCACTCCCACATCCGCGGCCTCGGCCTCGACTCCGCCCTCGAAGCTCGCGACGTCTCGGAAGGCATGGTGGGCCAGACCGCAGCTCGTAAAGCCGCCGGCGTGATTCTCCAGATGATCAAAGAAGGAAAGATCGCCGGCCGGGCTGTCCTCCTCGCCGGACAGCCTGGCACCGGCAAGACGGCCATTGCTATGGGGATGGCTAAGTCGTTAGGGCTCGAGACGCCGTTTGCGATGCTCGCCGGAAGCGAGCTGTTCTCGCTGGAGATGGGGAAGACGGAGGCGCTGATGCAGGCGTTTCGGAAGGCGATTGGGGTGAGGATCAAGGAGGAGACGGAGATTATTGAGGGGGAGGTTGTGGAGGTTCAGATTGACCGGCCTGCGGTGGCCGGAGCGGCGTCGAAGACTGGGAAGTTGACTTTGAAGACGACGGAGATGGAGACGGTGTATGACTTGGGGGCCAAGATGATTGAGGCGTTGGGGAAGGAGAAGGTGCAGAGTGGGGATGTGGTGGCTATTGATAAGGCGTCGGGGAAGATTACGAAGGTGGGGAGGTCGTTTTCGAGGTCCAGGGACTATGATGCGATGGGACCGAGTGTGAAGTTGGTGCAGTGTCCTGATGGGGAGTTGCAGAAGCGTAAGGAGGTTGTGCATTGCGTCACGCTTCATGAGATTGATGTCATCAACAGCAGAACACAAGGATTTCTGGCTCTCTTTACTGGAGATACTGGTGAAATTCGTTCAGAAGTGAGAGAACAGATTGACACAAAGGTAGCAGAGTGGAGGGAGGAAGGGAAGGCAGAAATTGTGCCGGGTGTTCTGTTTATCGATGAGGTGCATATGCTTGACATTGAATGCTTTTCTTTTCTGAATCGTGCTCTGGAGAATGAGATGGCTCCAATTTTAGTTGTTGCTACAAACAGAGGGATCACTACGATCAGAGGCACAAACTATAAATCCCCCCATGGGATTCCAATTGATCTCCTTGATCGCTTACTTATTATCACCACTCAGCCTTACACTGAGGATGAAATTCGCAAGATTCTGGACATCAGATCCCAAGAAGAAGAAGTTGAGATGTCTGAAGAGGCAAAGCATTTGTTGACCAAGATTGGTGTAGATGCATCTTTGAGATATGCCATCCATCTCATAACAGCTGCTGCCTTGGCATGCCAAAAGCGGAAGGGAAAGATTGTTGAGATGGAGGATATTAACCGAGTTTACCATCTGTTCTTGGATGTGAAACGATCAACACAATACTTGATGGAGTATCAGAGTCAGTACATGTTCAATGATGCTGATGAAGACGATGCCAATGCCATGCAACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0000812 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0031974 GO:0031981 GO:0032991 GO:0034708 GO:0035097 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044665 GO:0070013 GO:0070603 GO:0071339 GO:0097346 GO:1902494 GO:1904949 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TIP49

Protein Analysis

463

Amino Acids

50.95

Weight (kDa)

5.39

Isoelectric Point (pI)

39.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIP49	PF06068	17 - 361	1.1e-165	TIP49 P-loop domain
DnaB_C	PF03796	61 - 193	1.3e-06	DnaB-like helicase C terminal domain
AAA	PF00004	69 - 120	3.6e-06	ATPase family associated with various cellular activities (AAA)
TIP49_C	PF17856	367 - 432	2.4e-25	TIP49 AAA-lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49830 AT5G67630
fragaria_vesca	FvH4_1g17590
malus_domestica	MD02G1184700.v1.1 MD08G1213300.v1.1
prunus_persica	Prupe.1G544700_v2.0.a1
pyrus_communis	pycom02g14980 pycom15g25960
rosa_chinensis	RchiOBHm_Chr2g0107901 RchiOBHm_Chr6g0265871 RchiOBHm_Chr6g0265881 RchiOBHm_Chr6g0265891 RchiOBHm_Chr6g0265911
rosa_laevigata	RLG00000014147 RLG00000014151 RLG00000014152 RLG00000017626 RLG00000030880
rosa_multiflora	Rmu_sc0000149.1_g000017 Rmu_sc0001484.1_g000033 Rmu_sc0006952.1_g000010 Rmu_sc0006952.1_g000012 Rmu_sc0006952.1_g000034 Rmu_sc0013320.1_g000004 Rmu_sc0013320.1_g000009
rosa_roxburghii	Rroxscaffold_2G00135810 Rroxscaffold_7G00202230 Rroxscaffold_7G00202270 Rroxscaffold_7G00202280 Rroxscaffold_7G00202290
rosa_rugosa	Rorug02G0148600 Rorug02G0148600 Rorug06G0021100 Rorug06G0021100 Rorug06G0021300
rosa_samantha	Rh2AG197900 Rh2BG210800 Rh2CG202600 Rh2DG205600 Rh6BG142600 Rh6BG142700 Rh6CG139200 Rh6CG139300 Rh6DG126800 Rh6DG126900
rosa_wichuraiana	Rw0G009670 Rw0G009680 Rw2G015700 Rw6G012330 Rw6G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	114
AccB1I	GGYRCC	1 cut(s)	227
AccBSI	CCGCTC	1 cut(s)	452
AccII	CGCG	2 cut(s)	75, 108
AciI	CCGC	9 cut(s)	5, 73, 75, 93, 138, 153, 440, 452, 1237
AclWI	GGATC	3 cut(s)	386, 992, 1107
AcoI	YGGCCR	3 cut(s)	196, 240, 444
AcsI	RAATTY	2 cut(s)	792, 1089
AcuI	CTGAAG	1 cut(s)	1161
AcyI	GRCGYC	4 cut(s)	111, 281, 455, 584
AfaI	GTAC	1 cut(s)	1340
AfiI	CCNNNNNNNGG	3 cut(s)	230, 439, 1023
AflIII	ACRYGT	1 cut(s)	1341
AgsI	TTSAA	3 cut(s)	481, 911, 1348
AjnI	CCWGG	2 cut(s)	223, 626
AluBI	AGCT	6 cut(s)	10, 16, 104, 143, 310, 1214
AluI	AGCT	6 cut(s)	10, 16, 104, 143, 310, 1214
Alw21I	GWGCWC	1 cut(s)	937
Alw26I	GTCTC	5 cut(s)	24, 118, 272, 383, 491
AlwI	GGATC	3 cut(s)	386, 992, 1107
AlwNI	CAGNNNCTG	1 cut(s)	1217
Ama87I	CYCGRG	1 cut(s)	275
AoxI	GGCC	8 cut(s)	76, 82, 130, 196, 240, 434, 444, 516
ApeKI	GCWGC	3 cut(s)	140, 1214, 1217
ApoI	RAATTY	2 cut(s)	792, 1089
AspLEI	GCGC	3 cut(s)	51, 59, 343
AspS9I	GGNCC	4 cut(s)	130, 516, 624, 647
AsuC2I	CCSGG	2 cut(s)	200, 870
AsuHPI	GGTGA	3 cut(s)	385, 800, 1054
AvaI	CYCGRG	1 cut(s)	275
AvaII	GGWCC	2 cut(s)	624, 647
BanI	GGYRCC	1 cut(s)	227
BanII	GRGCYC	1 cut(s)	276
BbsI	GAAGAC	4 cut(s)	338, 467, 488, 1368
Bbv12I	GWGCWC	1 cut(s)	937
BbvI	GCAGC	3 cut(s)	152, 1201, 1204
BceAI	ACGGC	2 cut(s)	255, 268
BcgI	CGANNNNNNTGC	4 cut(s)	338, 372, 1355, 1389
BciT130I	CCWGG	2 cut(s)	225, 628
BclI	TGATCA	1 cut(s)	174
BcnI	CCSGG	2 cut(s)	200, 870
BcoDI	GTCTC	5 cut(s)	24, 118, 272, 383, 491
BfoI	RGCGCY	2 cut(s)	60, 344
BglI	GCCNNNNNGGC	2 cut(s)	200, 452
BisI	GCNGC	6 cut(s)	76, 141, 153, 453, 1215, 1218
BlsI	GCNGC	6 cut(s)	77, 142, 154, 454, 1216, 1219
Bme1390I	CCNGG	4 cut(s)	200, 225, 628, 870
Bme18I	GGWCC	2 cut(s)	624, 647
BmeT110I	CYCGRG	1 cut(s)	275
BmgT120I	GGNCC	4 cut(s)	130, 516, 624, 647
BmiI	GGNNCC	4 cut(s)	229, 517, 648, 954
BmrFI	CCNGG	4 cut(s)	200, 225, 628, 870
BmrI	ACTGGG	1 cut(s)	474
BmsI	GCATC	7 cut(s)	282, 336, 628, 1168, 1190, 1342, 1357
BmuI	ACTGGG	1 cut(s)	474
BpiI	GAAGAC	4 cut(s)	338, 467, 488, 1368
BplI	GAGNNNNNCTC	2 cut(s)	299, 331
BpmI	CTGGAG	4 cut(s)	152, 341, 798, 959
BpuMI	CCSGG	2 cut(s)	200, 870
Bsa29I	ATCGAT	1 cut(s)	885
BsaHI	GRCGYC	4 cut(s)	111, 281, 455, 584
BsaI	GGTCTC	1 cut(s)	24
BsaJI	CCNNGG	5 cut(s)	73, 79, 627, 1021, 1221
BsaXI	ACNNNNNCTCC	2 cut(s)	488, 518
Bsc4I	CCNNNNNNNGG	3 cut(s)	230, 439, 1023
Bse118I	RCCGGY	4 cut(s)	155, 194, 230, 432
Bse1I	ACTGG	3 cut(s)	469, 781, 790
Bse3DI	GCAATG	2 cut(s)	243, 709
BseBI	CCWGG	2 cut(s)	225, 628
BseCI	ATCGAT	1 cut(s)	885
BseDI	CCNNGG	5 cut(s)	73, 79, 627, 1021, 1221
BseGI	GGATG	6 cut(s)	69, 261, 568, 1090, 1197, 1300
BseLI	CCNNNNNNNGG	3 cut(s)	230, 439, 1023
BseMI	GCAATG	2 cut(s)	243, 709
BseMII	CTCAG	2 cut(s)	1071, 1082
BseNI	ACTGG	3 cut(s)	469, 781, 790
BseRI	GAGGAG	2 cut(s)	200, 401
BseX3I	CGGCCG	1 cut(s)	196
BseXI	GCAGC	3 cut(s)	152, 1201, 1204
BsgI	GTGCAG	2 cut(s)	572, 686
Bsh1236I	CGCG	2 cut(s)	75, 108
Bsh1285I	CGRYCG	1 cut(s)	199
BshFI	GGCC	8 cut(s)	78, 84, 132, 198, 242, 436, 446, 518
BshNI	GGYRCC	1 cut(s)	227
BshVI	ATCGAT	1 cut(s)	885
BsiEI	CGRYCG	1 cut(s)	199
BsiHKAI	GWGCWC	1 cut(s)	937
BsiHKCI	CYCGRG	1 cut(s)	275
BsiSI	CCGG	9 cut(s)	156, 195, 199, 216, 231, 300, 433, 447, 869
BslFI	GGGAC	2 cut(s)	644, 660
BslI	CCNNNNNNNGG	3 cut(s)	230, 439, 1023
BsmAI	GTCTC	5 cut(s)	24, 118, 272, 383, 491
BsmBI	CGTCTC	4 cut(s)	118, 272, 383, 491
BsmFI	GGGAC	2 cut(s)	644, 660
BsmI	GAATGC	1 cut(s)	917
BsnI	GGCC	8 cut(s)	78, 84, 132, 198, 242, 436, 446, 518
Bso31I	GGTCTC	1 cut(s)	24
BsoBI	CYCGRG	1 cut(s)	275
Bsp1286I	GDGCHC	2 cut(s)	276, 937
Bsp143I	GATC	9 cut(s)	174, 189, 378, 984, 993, 1036, 1045, 1112, 1304
Bsp19I	CCATGG	1 cut(s)	1021
Bsp68I	TCGCGA	1 cut(s)	108
BspACI	CCGC	9 cut(s)	5, 73, 75, 93, 138, 153, 440, 452, 1237
BspANI	GGCC	8 cut(s)	78, 84, 132, 198, 242, 436, 446, 518
BspCNI	CTCAG	2 cut(s)	1072, 1081
BspDI	ATCGAT	1 cut(s)	885
BspFNI	CGCG	2 cut(s)	75, 108
BspHI	TCATGA	1 cut(s)	724
BspLI	GGNNCC	4 cut(s)	229, 517, 648, 954
BspPI	GGATC	3 cut(s)	386, 992, 1107
BspT107I	GGYRCC	1 cut(s)	227
BspTNI	GGTCTC	1 cut(s)	24
BsrBI	CCGCTC	1 cut(s)	452
BsrDI	GCAATG	2 cut(s)	243, 709
BsrFI	RCCGGY	4 cut(s)	155, 194, 230, 432
BsrI	ACTGG	3 cut(s)	469, 781, 790
BssAI	RCCGGY	4 cut(s)	155, 194, 230, 432
BssECI	CCNNGG	5 cut(s)	73, 79, 627, 1021, 1221
BssMI	GATC	9 cut(s)	174, 189, 378, 984, 993, 1036, 1045, 1112, 1304
BssNI	GRCGYC	4 cut(s)	111, 281, 455, 584
BssT1I	CCWWGG	2 cut(s)	1021, 1221
Bst2UI	CCWGG	2 cut(s)	225, 628
Bst4CI	ACNGT	1 cut(s)	502
Bst6I	CTCTTC	1 cut(s)	1137
BstACI	GRCGYC	4 cut(s)	111, 281, 455, 584
BstC8I	GCNNGC	8 cut(s)	106, 157, 196, 297, 308, 351, 438, 1228
BstDEI	CTNAG	3 cut(s)	261, 1068, 1080
BstDSI	CCRYGG	2 cut(s)	73, 1021
BstF5I	GGATG	6 cut(s)	69, 261, 568, 1090, 1197, 1300
BstFNI	CGCG	2 cut(s)	75, 108
BstH2I	RGCGCY	2 cut(s)	60, 344
BstHHI	GCGC	3 cut(s)	51, 59, 343
BstKTI	GATC	9 cut(s)	177, 192, 381, 987, 996, 1039, 1048, 1115, 1307
BstMAI	GTCTC	5 cut(s)	24, 118, 272, 383, 491
BstMBI	GATC	9 cut(s)	174, 189, 378, 984, 993, 1036, 1045, 1112, 1304
BstMCI	CGRYCG	1 cut(s)	199
BstNI	CCWGG	2 cut(s)	225, 628
BstNSI	RCATGY	2 cut(s)	1230, 1345
BstSCI	CCNGG	4 cut(s)	198, 223, 626, 868
BstUI	CGCG	2 cut(s)	75, 108
BstV1I	GCAGC	3 cut(s)	152, 1201, 1204
BstV2I	GAAGAC	4 cut(s)	338, 467, 488, 1368
BstX2I	RGATCY	1 cut(s)	1112
BstXI	CCANNNNNNTGG	1 cut(s)	250
BstYI	RGATCY	1 cut(s)	1112
BstZI	CGGCCG	1 cut(s)	196
Bsu15I	ATCGAT	1 cut(s)	885
BsuRI	GGCC	8 cut(s)	78, 84, 132, 198, 242, 436, 446, 518
BsuTUI	ATCGAT	1 cut(s)	885
BtgI	CCRYGG	2 cut(s)	73, 1021
BtgZI	GCGATG	2 cut(s)	305, 656
BtsCI	GGATG	6 cut(s)	69, 261, 568, 1090, 1197, 1300
BtsI	GCAGTG	1 cut(s)	674
BtsIMutI	CAGTG	2 cut(s)	674, 1077
BtuMI	TCGCGA	1 cut(s)	108
Cac8I	GCNNGC	8 cut(s)	106, 157, 196, 297, 308, 351, 438, 1228
CaiI	CAGNNNCTG	1 cut(s)	1217
CciI	TCATGA	1 cut(s)	724
CfoI	GCGC	3 cut(s)	51, 59, 343
Cfr10I	RCCGGY	4 cut(s)	155, 194, 230, 432
Cfr13I	GGNCC	4 cut(s)	130, 516, 624, 647
Cfr42I	CCGCGG	1 cut(s)	76
ClaI	ATCGAT	1 cut(s)	885
CseI	GACGC	4 cut(s)	289, 444, 573, 703
Csp6I	GTAC	1 cut(s)	1339
CviAII	CATG	6 cut(s)	124, 725, 1022, 1227, 1342, 1378
CviQI	GTAC	1 cut(s)	1339
DdeI	CTNAG	3 cut(s)	261, 1068, 1080
DpnI	GATC	9 cut(s)	176, 191, 380, 986, 995, 1038, 1047, 1114, 1306
DpnII	GATC	9 cut(s)	174, 189, 378, 984, 993, 1036, 1045, 1112, 1304
EaeI	YGGCCR	3 cut(s)	196, 240, 444
EagI	CGGCCG	1 cut(s)	196
Eam1104I	CTCTTC	1 cut(s)	1137
EarI	CTCTTC	1 cut(s)	1137
EciI	GGCGGA	2 cut(s)	20, 82
EclXI	CGGCCG	1 cut(s)	196
Eco130I	CCWWGG	2 cut(s)	1021, 1221
Eco24I	GRGCYC	1 cut(s)	276
Eco31I	GGTCTC	1 cut(s)	24
Eco47I	GGWCC	2 cut(s)	624, 647
Eco52I	CGGCCG	1 cut(s)	196
Eco57I	CTGAAG	1 cut(s)	1161
Eco88I	CYCGRG	1 cut(s)	275
EcoRII	CCWGG	2 cut(s)	223, 626
EcoT14I	CCWWGG	2 cut(s)	1021, 1221
EcoT22I	ATGCAT	1 cut(s)	1183
EcoT38I	GRGCYC	1 cut(s)	276
ErhI	CCWWGG	2 cut(s)	1021, 1221
Esp3I	CGTCTC	4 cut(s)	118, 272, 383, 491
FaeI	CATG	6 cut(s)	127, 728, 1025, 1230, 1345, 1381
FaqI	GGGAC	2 cut(s)	644, 660
FatI	CATG	6 cut(s)	123, 724, 1021, 1226, 1341, 1377
FauNDI	CATATG	1 cut(s)	897
FbaI	TGATCA	1 cut(s)	174
Fnu4HI	GCNGC	6 cut(s)	76, 141, 153, 453, 1215, 1218
FokI	GGATG	6 cut(s)	56, 268, 575, 1097, 1184, 1307
FriOI	GRGCYC	1 cut(s)	276
Fsp4HI	GCNGC	6 cut(s)	76, 141, 153, 453, 1215, 1218
GlaI	GCGC	3 cut(s)	50, 58, 342
GluI	GCNGC	6 cut(s)	76, 141, 153, 453, 1215, 1218
GsuI	CTGGAG	4 cut(s)	152, 341, 798, 959
HaeII	RGCGCY	2 cut(s)	60, 344
HaeIII	GGCC	8 cut(s)	78, 84, 132, 198, 242, 436, 446, 518
HapII	CCGG	9 cut(s)	156, 195, 199, 216, 231, 300, 433, 447, 869
HgaI	GACGC	4 cut(s)	289, 444, 573, 703
HhaI	GCGC	3 cut(s)	51, 59, 343
Hin1I	GRCGYC	4 cut(s)	111, 281, 455, 584
Hin1II	CATG	6 cut(s)	127, 728, 1025, 1230, 1345, 1381
Hin6I	GCGC	3 cut(s)	49, 57, 341
HinP1I	GCGC	3 cut(s)	49, 57, 341
HincII	GTYRAC	2 cut(s)	474, 1161
HindII	GTYRAC	2 cut(s)	474, 1161
HinfI	GANTC	6 cut(s)	89, 163, 928, 1027, 1099, 1333
HpaII	CCGG	9 cut(s)	156, 195, 199, 216, 231, 300, 433, 447, 869
HphI	GGTGA	3 cut(s)	385, 800, 1054
Hpy166II	GTNNAC	3 cut(s)	474, 1161, 1279
Hpy188III	TCNNGA	7 cut(s)	107, 169, 277, 674, 725, 938, 1103
Hpy8I	GTNNAC	3 cut(s)	474, 1161, 1279
Hpy99I	CGWCG	4 cut(s)	113, 460, 490, 589
HpyAV	CCTTC	9 cut(s)	113, 176, 355, 535, 541, 595, 842, 847, 1234
HpyCH4III	ACNGT	1 cut(s)	502
HpyCH4IV	ACGT	1 cut(s)	111
HpyCH4V	TGCA	8 cut(s)	349, 553, 667, 688, 709, 895, 1181, 1381
HpyF3I	CTNAG	3 cut(s)	261, 1068, 1080
HpySE526I	ACGT	1 cut(s)	111
Hsp92I	GRCGYC	4 cut(s)	111, 281, 455, 584
Hsp92II	CATG	6 cut(s)	127, 728, 1025, 1230, 1345, 1381
HspAI	GCGC	3 cut(s)	49, 57, 341
KroI	GCCGGC	2 cut(s)	155, 194
KroNI	GCCGGC	2 cut(s)	157, 196
Ksp22I	TGATCA	1 cut(s)	174
KspI	CCGCGG	1 cut(s)	76
Kzo9I	GATC	9 cut(s)	174, 189, 378, 984, 993, 1036, 1045, 1112, 1304
LmnI	GCTCC	3 cut(s)	7, 449, 958
Lsp1109I	GCAGC	3 cut(s)	152, 1201, 1204
LweI	GCATC	7 cut(s)	282, 336, 628, 1168, 1190, 1342, 1357
MaeII	ACGT	1 cut(s)	111
MaeIII	GTNAC	1 cut(s)	715
MalI	GATC	9 cut(s)	176, 191, 380, 986, 995, 1038, 1047, 1114, 1306
MbiI	CCGCTC	1 cut(s)	452
MboI	GATC	9 cut(s)	174, 189, 378, 984, 993, 1036, 1045, 1112, 1304
MboII	GAAGA	8 cut(s)	343, 472, 493, 604, 1133, 1136, 1154, 1373
MfeI	CAATTG	1 cut(s)	1032
MflI	RGATCY	1 cut(s)	1112
MhlI	GDGCHC	2 cut(s)	276, 937
MluCI	AATT	5 cut(s)	792, 861, 957, 1032, 1089
MlyI	GAGTC	2 cut(s)	83, 1342
Mph1103I	ATGCAT	1 cut(s)	1183
MreI	CGCCGGCG	1 cut(s)	155
MroNI	GCCGGC	2 cut(s)	155, 194
MseI	TTAA	1 cut(s)	1269
MslI	CAYNNNNRTG	1 cut(s)	248
MspA1I	CMGCKG	2 cut(s)	75, 1214
MspI	CCGG	9 cut(s)	156, 195, 199, 216, 231, 300, 433, 447, 869
MspR9I	CCNGG	4 cut(s)	200, 225, 628, 870
MunI	CAATTG	1 cut(s)	1032
Mva1269I	GAATGC	1 cut(s)	917
MvaI	CCWGG	2 cut(s)	225, 628
MvnI	CGCG	2 cut(s)	75, 108
NaeI	GCCGGC	2 cut(s)	157, 196
NciI	CCSGG	2 cut(s)	200, 870
NcoI	CCATGG	1 cut(s)	1021
NdeI	CATATG	1 cut(s)	897
NdeII	GATC	9 cut(s)	174, 189, 378, 984, 993, 1036, 1045, 1112, 1304
NgoMIV	GCCGGC	2 cut(s)	155, 194
NlaIII	CATG	6 cut(s)	127, 728, 1025, 1230, 1345, 1381
NlaIV	GGNNCC	4 cut(s)	229, 517, 648, 954
NmeAIII	GCCGAG	2 cut(s)	53, 60
NmuCI	GTSAC	1 cut(s)	715
NruI	TCGCGA	1 cut(s)	108
NsiI	ATGCAT	1 cut(s)	1183
NspI	RCATGY	2 cut(s)	1230, 1345
PaeI	GCATGC	1 cut(s)	1230
PaeR7I	CTCGAG	1 cut(s)	275
PagI	TCATGA	1 cut(s)	724
PciI	ACATGT	1 cut(s)	1341
PcsI	WCGNNNNNNNCGW	3 cut(s)	105, 287, 303
PctI	GAATGC	1 cut(s)	917
PdiI	GCCGGC	2 cut(s)	157, 196
PfeI	GAWTC	4 cut(s)	163, 928, 1027, 1099
PkrI	GCNGC	6 cut(s)	77, 142, 154, 454, 1216, 1219
PleI	GAGTC	2 cut(s)	83, 1341
PpsI	GAGTC	2 cut(s)	83, 1341
PscI	ACATGT	1 cut(s)	1341
Psp6I	CCWGG	2 cut(s)	223, 626
PspGI	CCWGG	2 cut(s)	223, 626
PspN4I	GGNNCC	4 cut(s)	229, 517, 648, 954
PspPI	GGNCC	4 cut(s)	130, 516, 624, 647
PstNI	CAGNNNCTG	1 cut(s)	1217
PsuI	RGATCY	1 cut(s)	1112
PvuII	CAGCTG	1 cut(s)	1214
RruI	TCGCGA	1 cut(s)	108
RsaI	GTAC	1 cut(s)	1340
RsaNI	GTAC	1 cut(s)	1339
RseI	CAYNNNNRTG	1 cut(s)	248
SacII	CCGCGG	1 cut(s)	76
SaqAI	TTAA	1 cut(s)	1269
SatI	GCNGC	6 cut(s)	76, 141, 153, 453, 1215, 1218
Sau3AI	GATC	9 cut(s)	174, 189, 378, 984, 993, 1036, 1045, 1112, 1304
Sau96I	GGNCC	4 cut(s)	130, 516, 624, 647
SchI	GAGTC	2 cut(s)	83, 1342
ScrFI	CCNGG	4 cut(s)	200, 225, 628, 870
SduI	GDGCHC	2 cut(s)	276, 937
SfaNI	GCATC	7 cut(s)	282, 336, 628, 1168, 1190, 1342, 1357
Sfr274I	CTCGAG	1 cut(s)	275
Sfr303I	CCGCGG	1 cut(s)	76
SgrAI	CRCCGGYG	1 cut(s)	155
SgrBI	CCGCGG	1 cut(s)	76
SinI	GGWCC	2 cut(s)	624, 647
SlaI	CTCGAG	1 cut(s)	275
SmiMI	CAYNNNNRTG	1 cut(s)	248
SmlI	CTYRAG	1 cut(s)	275
SmoI	CTYRAG	1 cut(s)	275
SphI	GCATGC	1 cut(s)	1230
Sse9I	AATT	5 cut(s)	792, 861, 957, 1032, 1089
SsiI	CCGC	9 cut(s)	5, 73, 75, 93, 138, 153, 440, 452, 1237
StyD4I	CCNGG	4 cut(s)	198, 223, 626, 868
StyI	CCWWGG	2 cut(s)	1021, 1221
TaaI	ACNGT	1 cut(s)	502
TaiI	ACGT	1 cut(s)	114
TaqI	TCGA	6 cut(s)	87, 99, 276, 458, 620, 885
TaqII	GACCGA	1 cut(s)	664
TasI	AATT	5 cut(s)	792, 861, 957, 1032, 1089
TatI	WGTACW	1 cut(s)	1338
TauI	GCSGC	3 cut(s)	78, 155, 455
TfiI	GAWTC	4 cut(s)	163, 928, 1027, 1099
Tru1I	TTAA	1 cut(s)	1269
Tru9I	TTAA	1 cut(s)	1269
TscAI	CASTG	2 cut(s)	674, 1084
TseFI	GTSAC	1 cut(s)	715
TseI	GCWGC	3 cut(s)	140, 1214, 1217
Tsp45I	GTSAC	1 cut(s)	715
TspDTI	ATGAA	3 cut(s)	713, 1101, 1374
TspGWI	ACGGA	3 cut(s)	350, 407, 503
TspRI	CASTG	2 cut(s)	674, 1084
VpaK11BI	GGWCC	2 cut(s)	624, 647
XapI	RAATTY	2 cut(s)	792, 1089
XceI	RCATGY	2 cut(s)	1230, 1345
XhoI	CTCGAG	1 cut(s)	275
ZraI	GACGTC	1 cut(s)	112
Zsp2I	ATGCAT	1 cut(s)	1183

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.