Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00383

Orthogroup ID

OG0001576

Physical Location & Seq

Genomic Coordinates Reverse (-)

24970 .. 26743

Gene Structure 1774 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G009680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGATGCGGAGAGCTGCTGCTGCTTCTTCTTCTTATTGCAACAACAGAGGTAGAGGAGGAGGAGGTATGCCTCGTCTTCATTCTATTCTTGTTTCCTTTCATTCTCAAGCTTCAGTGGCCAGCACTATTAGAAACCCACCCAAGCTCACTAATCTTGGGGTTGGGGATGGCGTAAGTTTGTTCAATGAGATCCTTCAAATGCGTCCTCTGCCTTGTGTTGTCCGTTTCAATCAAATCATGGGTCACATCGCAAAATTGAAACATTATCAGGCGGTCATTTCTCTGTATACCCAAATGGATCGGCTAAGAGTTGTTCCCGATGCTTACACTCTCAATATTATCATCAATTGCTTTTGTCATTTGAACCAAATGGGATTCAGTTTGTCTGTGTTGGGAAAATTCTTCAAATTTGGTATTCAACCAAATATCACAACCCTCAACACTCTTATCAAGGGCTTTTTCGTTCAAGGGAAAGTGTCTCAGGCAGCACTACTTTTCAGCACAATGGTGGAGCAAGGTTGTAAGCCAAATCATGTTACTTTCGGAACGCTAATAAGGGGCTATTATTGTAAGCCTAATGTGGTTGTCTATAATATCATCATTGACAGTCTCTGTAAGGATACACTAGTTCCTGATGCAGTTAAGCTCTTTTCAGAAATGATTAGTAGGGGTATAGCCCCTGACGTCATTACTTATACCTCTTTGATTCATGGAGTTTGCAAATTAGGCCAGTGGAAAGAAGCTACGAGATTGTTGAATGAGATGATCAGTAAAGATATCTTCCCGAATTTAGTAACCTACAGTATCCTGGTCGATTCACTTTGTAAGGAGGGGATGGTTGTGGAAGCACAAAGTGTGCTTGAAATGATGATTCAAAGAGGTATCAAACCTGATACAGTCACCTACAGTTCACTTATGGATGGCTACTGTCTGCGAGGAGAAATGGAGAAAGCTAAAGAGGTTTTTGATATGATGAATAGCAAGGGCTCCGCTGTTAATGCTTATAGTTATAACATACTGATGAATGGATATTGTAAGCATAAACAGATAGATGATGCCACCAGGGTTTTTCAGGAAATGTCTGATAGTGGACTGCTTCCAAATACCATTACATATACTGCTCTTATGGATGGTCTTTGCAAACTTGTGGCCAGCTTCCAATATTCAAACTTATGCTGTTTTAACTGGATGGCCTGTGTAAAAAACCAACAACTTGCAATGGCATTGGAGTTGTTTAGAGAGATGGAATGCATGAAGCTGGATTTGGATATAGTAATTTACGATATTCTTATTGAAGGTTTGTGTATAGCTGGAAAAATTGCATCTGCAAGGGACCATTTTTATGGTTTATCATCAAAAGGACTTGAACCTGATGCAAGGACGTACACTATAATGATCAAGGGACTTTGTGACGGAGGCTTAATAAATGAAGCGGAAAAGTTGCTCAGAGAAATGGAAGATAAATGCCATTCTCCAAATGATTGCACATATAACACAATTATCCGAGGGTTTCTCAACAATGACGAGACAGTAAAGGCAGTGGGACTTGTTCACGAAATGATGGATAGGGGTTTCTCTGCAGATGCATGGACAATGGAATTAATCATTGGTTTATTGTCTAAAGATAAAGTAGATCCTGCTTTGTTGTCATTGATAGAAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0000966 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004016 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009791 GO:0009845 GO:0009975 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0016829 GO:0016849 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048856 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0090351 GO:0090615 GO:0097159 GO:0140053 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

554

Amino Acids

61.77

Weight (kDa)

7.44

Isoelectric Point (pI)

28.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	71 - 120	1e-09	PPR repeat family
PPR_3	PF13812	136 - 186	8.8e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	141 - 188	3.8e-13	PPR repeat family
PPR_1	PF12854	190 - 220	4.1e-11	PPR repeat
PPR_2	PF13041	192 - 241	1.3e-18	PPR repeat family
PPR	PF01535	195 - 225	2.4e-06	PPR repeat
PPR_long	PF17177	209 - 307	2.9e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	215 - 272	7.7e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	223 - 255	2.5e-12	PPR repeat
PPR_2	PF13041	227 - 276	8e-18	PPR repeat family
PPR	PF01535	230 - 260	1.3e-07	PPR repeat
PPR_1	PF12854	258 - 290	1.2e-10	PPR repeat
PPR	PF01535	265 - 295	3.3e-07	PPR repeat
PPR_2	PF13041	272 - 310	1.1e-10	PPR repeat family
PPR_3	PF13812	285 - 344	2.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	293 - 325	5.5e-12	PPR repeat
PPR_2	PF13041	299 - 346	5e-14	PPR repeat family
PPR	PF01535	300 - 329	3.2e-08	PPR repeat
TPR_24	PF23276	315 - 381	2.8e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	325 - 377	1.2e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	329 - 361	3e-09	PPR repeat
PPR_2	PF13041	333 - 381	1.4e-18	PPR repeat family
PPR	PF01535	335 - 365	2.3e-08	PPR repeat
PPR_long	PF17177	395 - 521	1.4e-06	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	423 - 471	4.6e-12	PPR repeat family
PPR_1	PF12854	453 - 486	3.9e-13	PPR repeat
PPR	PF01535	461 - 488	1.1e-06	PPR repeat
PPR_2	PF13041	470 - 505	7.7e-07	PPR repeat family
PPR_2	PF13041	492 - 537	2.4e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49830 AT5G67630
fragaria_vesca	FvH4_1g17590
malus_domestica	MD02G1184700.v1.1 MD08G1213300.v1.1
prunus_persica	Prupe.1G544700_v2.0.a1
pyrus_communis	pycom02g14980 pycom15g25960
rosa_chinensis	RchiOBHm_Chr2g0107901 RchiOBHm_Chr6g0265871 RchiOBHm_Chr6g0265881 RchiOBHm_Chr6g0265891 RchiOBHm_Chr6g0265911
rosa_laevigata	RLG00000014147 RLG00000014151 RLG00000014152 RLG00000017626 RLG00000030880
rosa_multiflora	Rmu_sc0000149.1_g000017 Rmu_sc0001484.1_g000033 Rmu_sc0006952.1_g000010 Rmu_sc0006952.1_g000012 Rmu_sc0006952.1_g000034 Rmu_sc0013320.1_g000004 Rmu_sc0013320.1_g000009
rosa_roxburghii	Rroxscaffold_2G00135810 Rroxscaffold_7G00202230 Rroxscaffold_7G00202270 Rroxscaffold_7G00202280 Rroxscaffold_7G00202290
rosa_rugosa	Rorug02G0148600 Rorug02G0148600 Rorug06G0021100 Rorug06G0021100 Rorug06G0021300
rosa_samantha	Rh2AG197900 Rh2BG210800 Rh2CG202600 Rh2DG205600 Rh6BG142600 Rh6BG142700 Rh6CG139200 Rh6CG139300 Rh6DG126800 Rh6DG126900
rosa_wichuraiana	Rw0G009670 Rw0G009680 Rw2G015700 Rw6G012330 Rw6G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1011
AatII	GACGTC	1 cut(s)	687
AccI	GTMKAC	1 cut(s)	287
AciI	CCGC	4 cut(s)	7, 272, 990, 1433
AclWI	GGATC	3 cut(s)	184, 306, 1628
AcoI	YGGCCR	2 cut(s)	117, 1149
AcsI	RAATTY	3 cut(s)	398, 407, 787
AcuI	CTGAAG	1 cut(s)	96
AcyI	GRCGYC	1 cut(s)	684
AdeI	CACNNNGTG	1 cut(s)	854
AfaI	GTAC	1 cut(s)	1385
AhlI	ACTAGT	1 cut(s)	625
AjnI	CCWGG	2 cut(s)	807, 1061
AjuI	GAANNNNNNNTTGG	4 cut(s)	1247, 1279, 1590, 1622
AleI	CACNNNNGTG	1 cut(s)	506
AluBI	AGCT	9 cut(s)	14, 110, 145, 646, 743, 953, 1155, 1258, 1310
AluI	AGCT	9 cut(s)	14, 110, 145, 646, 743, 953, 1155, 1258, 1310
Alw26I	GTCTC	3 cut(s)	483, 614, 1520
AlwI	GGATC	3 cut(s)	184, 306, 1628
AlwNI	CAGNNNCTG	1 cut(s)	612
AoxI	GGCC	4 cut(s)	117, 727, 1149, 1191
ApeKI	GCWGC	4 cut(s)	14, 17, 20, 485
ApoI	RAATTY	3 cut(s)	398, 407, 787
ArsI	GACNNNNNNTTYG	2 cut(s)	226, 258
AseI	ATTAAT	1 cut(s)	1601
AspS9I	GGNCC	1 cut(s)	1333
AsuHPI	GGTGA	1 cut(s)	892
AvaII	GGWCC	1 cut(s)	1333
BaeI	ACNNNNGTAYC	2 cut(s)	612, 645
BalI	TGGCCA	2 cut(s)	119, 1151
BanII	GRGCYC	1 cut(s)	989
BbsI	GAAGAC	1 cut(s)	68
BbvI	GCAGC	3 cut(s)	4, 7, 497
BccI	CCATC	7 cut(s)	161, 829, 914, 1124, 1183, 1237, 1555
BciT130I	CCWGG	2 cut(s)	809, 1063
BciVI	GTATCC	2 cut(s)	613, 815
BclI	TGATCA	2 cut(s)	765, 1395
BcoDI	GTCTC	3 cut(s)	483, 614, 1520
BcuI	ACTAGT	1 cut(s)	625
BfaI	CTAG	1 cut(s)	626
BfmI	CTRYAG	3 cut(s)	799, 904, 1578
BfuI	GTATCC	2 cut(s)	613, 815
BisI	GCNGC	4 cut(s)	15, 18, 21, 486
BlsI	GCNGC	4 cut(s)	16, 19, 22, 487
Bme1390I	CCNGG	2 cut(s)	809, 1063
Bme18I	GGWCC	1 cut(s)	1333
BmgT120I	GGNCC	1 cut(s)	1333
BmiI	GGNNCC	2 cut(s)	988, 1334
BmrFI	CCNGG	2 cut(s)	809, 1063
BmsI	GCATC	6 cut(s)	310, 625, 1045, 1331, 1363, 1573
BpiI	GAAGAC	1 cut(s)	68
BplI	GAGNNNNNCTC	2 cut(s)	1497, 1529
BpuEI	CTTGAG	1 cut(s)	90
BsaHI	GRCGYC	1 cut(s)	684
BsaJI	CCNNGG	2 cut(s)	1062, 1504
Bse1I	ACTGG	2 cut(s)	730, 1190
Bse3DI	GCAATG	1 cut(s)	1224
BseBI	CCWGG	2 cut(s)	809, 1063
BseDI	CCNNGG	2 cut(s)	1062, 1504
BseGI	GGATG	5 cut(s)	172, 840, 925, 1135, 1194
BseMI	GCAATG	1 cut(s)	1224
BseMII	CTCAG	2 cut(s)	494, 1459
BseNI	ACTGG	2 cut(s)	730, 1190
BseRI	GAGGAG	4 cut(s)	69, 72, 75, 951
BseXI	GCAGC	3 cut(s)	4, 7, 497
BshFI	GGCC	4 cut(s)	119, 729, 1151, 1193
BslFI	GGGAC	3 cut(s)	1346, 1416, 1557
BsmAI	GTCTC	3 cut(s)	483, 614, 1520
BsmFI	GGGAC	3 cut(s)	1346, 1416, 1557
BsmI	GAATGC	1 cut(s)	1253
BsnI	GGCC	4 cut(s)	119, 729, 1151, 1193
Bsp1286I	GDGCHC	1 cut(s)	989
Bsp143I	GATC	5 cut(s)	189, 298, 765, 1395, 1633
BspACI	CCGC	4 cut(s)	7, 272, 990, 1433
BspANI	GGCC	4 cut(s)	119, 729, 1151, 1193
BspCNI	CTCAG	2 cut(s)	493, 1458
BspLI	GGNNCC	2 cut(s)	988, 1334
BspMAI	CTGCAG	1 cut(s)	1582
BspPI	GGATC	3 cut(s)	184, 306, 1628
BsrDI	GCAATG	1 cut(s)	1224
BsrI	ACTGG	2 cut(s)	730, 1190
BssECI	CCNNGG	2 cut(s)	1062, 1504
BssMI	GATC	5 cut(s)	189, 298, 765, 1395, 1633
BssNAI	GTATAC	1 cut(s)	288
BssNI	GRCGYC	1 cut(s)	684
Bst1107I	GTATAC	1 cut(s)	288
Bst2UI	CCWGG	2 cut(s)	809, 1063
Bst4CI	ACNGT	6 cut(s)	608, 803, 898, 908, 929, 1531
BstACI	GRCGYC	1 cut(s)	684
BstC8I	GCNNGC	2 cut(s)	121, 1153
BstDEI	CTNAG	3 cut(s)	305, 480, 1445
BstF5I	GGATG	5 cut(s)	172, 840, 925, 1135, 1194
BstKTI	GATC	5 cut(s)	192, 301, 768, 1398, 1636
BstMAI	GTCTC	3 cut(s)	483, 614, 1520
BstMBI	GATC	5 cut(s)	189, 298, 765, 1395, 1633
BstMWI	GCNNNNNNNGC	5 cut(s)	20, 116, 208, 726, 998
BstNI	CCWGG	2 cut(s)	809, 1063
BstSCI	CCNGG	2 cut(s)	807, 1061
BstSFI	CTRYAG	3 cut(s)	799, 904, 1578
BstV1I	GCAGC	3 cut(s)	4, 7, 497
BstV2I	GAAGAC	1 cut(s)	68
BstX2I	RGATCY	2 cut(s)	189, 1633
BstXI	CCANNNNNNTGG	1 cut(s)	1343
BstYI	RGATCY	2 cut(s)	189, 1633
BstZ17I	GTATAC	1 cut(s)	288
BsuI	GTATCC	2 cut(s)	613, 815
BsuRI	GGCC	4 cut(s)	119, 729, 1151, 1193
BtgZI	GCGATG	1 cut(s)	232
BtsCI	GGATG	5 cut(s)	172, 840, 925, 1135, 1194
BtsI	GCAGTG	1 cut(s)	1545
BtsIMutI	CAGTG	3 cut(s)	120, 737, 1545
Cac8I	GCNNGC	2 cut(s)	121, 1153
CaiI	CAGNNNCTG	1 cut(s)	612
Cfr13I	GGNCC	1 cut(s)	1333
CseI	GACGC	1 cut(s)	191
Csp6I	GTAC	1 cut(s)	1384
CviAII	CATG	5 cut(s)	238, 533, 710, 1252, 1587
CviQI	GTAC	1 cut(s)	1384
DdeI	CTNAG	3 cut(s)	305, 480, 1445
DpnI	GATC	5 cut(s)	191, 300, 767, 1397, 1635
DpnII	GATC	5 cut(s)	189, 298, 765, 1395, 1633
DraIII	CACNNNGTG	1 cut(s)	854
EaeI	YGGCCR	2 cut(s)	117, 1149
Eco24I	GRGCYC	1 cut(s)	989
Eco32I	GATATC	1 cut(s)	778
Eco47I	GGWCC	1 cut(s)	1333
Eco57I	CTGAAG	1 cut(s)	96
EcoRII	CCWGG	2 cut(s)	807, 1061
EcoRV	GATATC	1 cut(s)	778
EcoT22I	ATGCAT	2 cut(s)	1253, 1588
EcoT38I	GRGCYC	1 cut(s)	989
FaeI	CATG	5 cut(s)	241, 536, 713, 1255, 1590
FaqI	GGGAC	3 cut(s)	1346, 1416, 1557
FatI	CATG	5 cut(s)	237, 532, 709, 1251, 1586
FbaI	TGATCA	2 cut(s)	765, 1395
FblI	GTMKAC	1 cut(s)	287
Fnu4HI	GCNGC	4 cut(s)	15, 18, 21, 486
FokI	GGATG	5 cut(s)	179, 847, 932, 1142, 1201
FriOI	GRGCYC	1 cut(s)	989
Fsp4HI	GCNGC	4 cut(s)	15, 18, 21, 486
FspBI	CTAG	1 cut(s)	626
GluI	GCNGC	4 cut(s)	15, 18, 21, 486
HaeIII	GGCC	4 cut(s)	119, 729, 1151, 1193
HgaI	GACGC	1 cut(s)	191
Hin1I	GRCGYC	1 cut(s)	684
Hin1II	CATG	5 cut(s)	241, 536, 713, 1255, 1590
HindIII	AAGCTT	1 cut(s)	108
HinfI	GANTC	4 cut(s)	375, 706, 815, 871
HphI	GGTGA	1 cut(s)	892
Hpy166II	GTNNAC	5 cut(s)	288, 911, 1091, 1386, 1552
Hpy188I	TCNGA	5 cut(s)	545, 655, 1084, 1448, 1505
Hpy188III	TCNNGA	5 cut(s)	317, 632, 784, 1073, 1553
Hpy8I	GTNNAC	5 cut(s)	288, 911, 1091, 1386, 1552
HpyAV	CCTTC	2 cut(s)	203, 1289
HpyCH4III	ACNGT	6 cut(s)	608, 803, 898, 908, 929, 1531
HpyCH4IV	ACGT	2 cut(s)	684, 1382
HpyF10VI	GCNNNNNNNGC	5 cut(s)	20, 116, 208, 726, 998
HpyF3I	CTNAG	3 cut(s)	305, 480, 1445
HpySE526I	ACGT	2 cut(s)	684, 1382
Hsp92I	GRCGYC	1 cut(s)	684
Hsp92II	CATG	5 cut(s)	241, 536, 713, 1255, 1590
Ksp22I	TGATCA	2 cut(s)	765, 1395
Kzo9I	GATC	5 cut(s)	189, 298, 765, 1395, 1633
LmnI	GCTCC	2 cut(s)	511, 992
Lsp1109I	GCAGC	3 cut(s)	4, 7, 497
LweI	GCATC	6 cut(s)	310, 625, 1045, 1331, 1363, 1573
MaeI	CTAG	1 cut(s)	626
MaeII	ACGT	2 cut(s)	684, 1382
MaeIII	GTNAC	5 cut(s)	242, 535, 793, 898, 1409
MalI	GATC	5 cut(s)	191, 300, 767, 1397, 1635
MboI	GATC	5 cut(s)	189, 298, 765, 1395, 1633
MboII	GAAGA	6 cut(s)	18, 21, 68, 394, 772, 1469
MfeI	CAATTG	1 cut(s)	346
MflI	RGATCY	2 cut(s)	189, 1633
MhlI	GDGCHC	1 cut(s)	989
MlsI	TGGCCA	2 cut(s)	119, 1151
MluNI	TGGCCA	2 cut(s)	119, 1151
Mox20I	TGGCCA	2 cut(s)	119, 1151
Mph1103I	ATGCAT	2 cut(s)	1253, 1588
MscI	TGGCCA	2 cut(s)	119, 1151
MseI	TTAA	5 cut(s)	642, 996, 1182, 1421, 1601
MslI	CAYNNNNRTG	4 cut(s)	506, 1019, 1341, 1391
Msp20I	TGGCCA	2 cut(s)	119, 1151
MspA1I	CMGCKG	1 cut(s)	992
MspR9I	CCNGG	2 cut(s)	809, 1063
MunI	CAATTG	1 cut(s)	346
Mva1269I	GAATGC	1 cut(s)	1253
MvaI	CCWGG	2 cut(s)	809, 1063
MwoI	GCNNNNNNNGC	5 cut(s)	20, 116, 208, 726, 998
NdeII	GATC	5 cut(s)	189, 298, 765, 1395, 1633
NlaIII	CATG	5 cut(s)	241, 536, 713, 1255, 1590
NlaIV	GGNNCC	2 cut(s)	988, 1334
NmuCI	GTSAC	3 cut(s)	242, 898, 1409
NsiI	ATGCAT	2 cut(s)	1253, 1588
OliI	CACNNNNGTG	1 cut(s)	506
PctI	GAATGC	1 cut(s)	1253
PfeI	GAWTC	4 cut(s)	375, 706, 815, 871
PkrI	GCNGC	4 cut(s)	16, 19, 22, 487
PshBI	ATTAAT	1 cut(s)	1601
PsiI	TTATAA	1 cut(s)	1011
Psp6I	CCWGG	2 cut(s)	807, 1061
PspGI	CCWGG	2 cut(s)	807, 1061
PspN4I	GGNNCC	2 cut(s)	988, 1334
PspPI	GGNCC	1 cut(s)	1333
PstI	CTGCAG	1 cut(s)	1582
PstNI	CAGNNNCTG	1 cut(s)	612
PsuI	RGATCY	2 cut(s)	189, 1633
RsaI	GTAC	1 cut(s)	1385
RsaNI	GTAC	1 cut(s)	1384
RseI	CAYNNNNRTG	4 cut(s)	506, 1019, 1341, 1391
SaqAI	TTAA	5 cut(s)	642, 996, 1182, 1421, 1601
SatI	GCNGC	4 cut(s)	15, 18, 21, 486
Sau3AI	GATC	5 cut(s)	189, 298, 765, 1395, 1633
Sau96I	GGNCC	1 cut(s)	1333
ScrFI	CCNGG	2 cut(s)	809, 1063
SduI	GDGCHC	1 cut(s)	989
SfaNI	GCATC	6 cut(s)	310, 625, 1045, 1331, 1363, 1573
SfcI	CTRYAG	3 cut(s)	799, 904, 1578
SinI	GGWCC	1 cut(s)	1333
SmiMI	CAYNNNNRTG	4 cut(s)	506, 1019, 1341, 1391
SmlI	CTYRAG	1 cut(s)	105
SmoI	CTYRAG	1 cut(s)	105
SpeI	ACTAGT	1 cut(s)	625
SsiI	CCGC	4 cut(s)	7, 272, 990, 1433
SspI	AATATT	2 cut(s)	337, 1163
SspMI	CTAG	1 cut(s)	626
StyD4I	CCNGG	2 cut(s)	807, 1061
TaaI	ACNGT	6 cut(s)	608, 803, 898, 908, 929, 1531
TaiI	ACGT	2 cut(s)	687, 1385
TaqI	TCGA	1 cut(s)	813
TfiI	GAWTC	4 cut(s)	375, 706, 815, 871
Tru1I	TTAA	5 cut(s)	642, 996, 1182, 1421, 1601
Tru9I	TTAA	5 cut(s)	642, 996, 1182, 1421, 1601
TscAI	CASTG	3 cut(s)	120, 737, 1545
TseFI	GTSAC	3 cut(s)	242, 898, 1409
TseI	GCWGC	4 cut(s)	14, 17, 20, 485
Tsp45I	GTSAC	3 cut(s)	242, 898, 1409
TspDTI	ATGAA	7 cut(s)	68, 89, 698, 989, 1037, 1268, 1443
TspGWI	ACGGA	2 cut(s)	212, 1428
TspRI	CASTG	3 cut(s)	120, 737, 1545
VpaK11BI	GGWCC	1 cut(s)	1333
VspI	ATTAAT	1 cut(s)	1601
XapI	RAATTY	3 cut(s)	398, 407, 787
XmiI	GTMKAC	1 cut(s)	287
XspI	CTAG	1 cut(s)	626
ZraI	GACGTC	1 cut(s)	685
Zsp2I	ATGCAT	2 cut(s)	1253, 1588

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.