Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0001576

Physical Location & Seq

Genomic Coordinates Forward (+)

19322823 .. 19326989

Gene Structure 4167 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG205600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1389 bp

ATGGCGGAGCTAAAGCTCTCGGAGAGTCGAGACTTGACCCGAATAGAGCGCATAGGCGCACACTCCCACATCCGGGGACTTGGTCTTGACTCTGCCCTAGAAGCTCGTGATGTTTCGGAGGGGATGGTGGGCCAGACGGCGGCGCGCAAGGCTGCCGGTGTGATACTACAGATGATCAAGGAAGGGAAGATAGCTGGACGGGCTGTGTTGTTGGCTGGACAGCCTGGAACCGGCAAGACGGCCATTGCGATGGGGATGGCTAAGTCACTGGGGCTTGAAACGCCGTTTGCGATGTTAGCTGGGAGTGAGCTATTTTCGCTTGAGATGGGCAAGACCGAGGCCCTGATGCAAGCTTTTAGGAAGGCTATTGGGGTGAGAATCAAGGAAGAGACGGAAATTATTGAAGGTGAGGTGGTGGAGGTCCAGATTGACCGGCCTGCTGTGGCTGGTGCAGCTTCGAAGACTGGGAAATTGACGTTGAAGACGACGGAGATGGAGACGGTGTATGACTTGGGTGCCAAGATGATTGAAGCATTGGGGAAGGAGAAGGTGCAGAGCGGGGATGTGGTTGCCATTGACAAGGCGTCTGGGAAGATTACCAAGGTCGGTAGGTCATTTTCCAGGTCGAGGGACTATGATGCCATGGGACCGAGTGTTAAATTAGTGCAGTGCCCTGACGGGGAGTTGCAGAAGCGTAAGGAGGTTGTGCATTGCGTCACACTTCATGAGATAGATGTCATCAACAGCAGAACACAAGGATTTCTGGCACTCTTTACAGGAGATACTGGTGAAATTCGTTCAGAAGTGAGAGAACAGATTGACACAAAGGTAGCAGAGTGGAGGGAGGAAGGGAAGGCAGAAATTGTGCCAGGTGTTCTCTTTATCGATGAGGTCCATATGCTTGACATTGAGTGCTTTTCATTTCTAAATCGTGCTTTGGAGAATGAGATGGCTCCAATTTTAGTTGTTGCTACGAACAGAGGGATTACTACAATCAGAGGCACAAACTATAAATCTCCCCATGGGATTCCAATTGATCTCCTTGATCGCCTGCTTATCATCACCACTCAGCCTTACACAGAGGGTGAAATTCGCAAGATTCTTGACATAAGATCCCAAGAAGAAGAAGTTGAGATGTCTGAAGAGGCAAAGCATTTGTTGACCAAGATTGGTGTAGATGCATCCTTAAGATATGCCATCCATCTCATAACAGCTGCTGCATTGGCATGCCAAAAGCGGAAGGGAAAGATTGTTGAAATGGAGGATATTAACCGAGTTTACCATCTTTTCTTGGACGTGAAGCGATCAACACAATACTTGATGGAGTATCAGAGTCAGTACATGTTCAATGATGCTGATGAAGATGATAACAATGCCATGCAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0000812 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0031974 GO:0031981 GO:0032991 GO:0034708 GO:0035097 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044665 GO:0070013 GO:0070603 GO:0071339 GO:0097346 GO:1902494 GO:1904949 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TIP49

Protein Analysis

462

Amino Acids

50.93

Weight (kDa)

5.45

Isoelectric Point (pI)

39.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIP49	PF06068	17 - 361	1.7e-165	TIP49 P-loop domain
DnaB_C	PF03796	61 - 193	1.3e-06	DnaB-like helicase C terminal domain
AAA	PF00004	69 - 120	3.6e-06	ATPase family associated with various cellular activities (AAA)
TIP49_C	PF17856	367 - 432	2.4e-25	TIP49 AAA-lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49830 AT5G67630
fragaria_vesca	FvH4_1g17590
malus_domestica	MD02G1184700.v1.1 MD08G1213300.v1.1
prunus_persica	Prupe.1G544700_v2.0.a1
pyrus_communis	pycom02g14980 pycom15g25960
rosa_chinensis	RchiOBHm_Chr2g0107901 RchiOBHm_Chr6g0265871 RchiOBHm_Chr6g0265881 RchiOBHm_Chr6g0265891 RchiOBHm_Chr6g0265911
rosa_laevigata	RLG00000014147 RLG00000014151 RLG00000014152 RLG00000017626 RLG00000030880
rosa_multiflora	Rmu_sc0000149.1_g000017 Rmu_sc0001484.1_g000033 Rmu_sc0006952.1_g000010 Rmu_sc0006952.1_g000012 Rmu_sc0006952.1_g000034 Rmu_sc0013320.1_g000004 Rmu_sc0013320.1_g000009
rosa_roxburghii	Rroxscaffold_2G00135810 Rroxscaffold_7G00202230 Rroxscaffold_7G00202270 Rroxscaffold_7G00202280 Rroxscaffold_7G00202290
rosa_rugosa	Rorug02G0148600 Rorug02G0148600 Rorug06G0021100 Rorug06G0021100 Rorug06G0021300
rosa_samantha	Rh2AG197900 Rh2BG210800 Rh2CG202600 Rh2DG205600 Rh6BG142600 Rh6BG142700 Rh6CG139200 Rh6CG139300 Rh6DG126800 Rh6DG126900
rosa_wichuraiana	Rw0G009670 Rw0G009680 Rw2G015700 Rw6G012330 Rw6G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	515
AccBSI	CCGCTC	1 cut(s)	558
AccII	CGCG	1 cut(s)	145
AciI	CCGC	4 cut(s)	5, 140, 558, 1237
AclWI	GGATC	1 cut(s)	1107
AcoI	YGGCCR	1 cut(s)	240
AcsI	RAATTY	2 cut(s)	792, 1089
AcuI	CTGAAG	1 cut(s)	1161
AcyI	GRCGYC	1 cut(s)	584
AfaI	GTAC	1 cut(s)	1340
AfiI	CCNNNNNNNGG	6 cut(s)	72, 73, 139, 230, 627, 679
AflII	CTTAAG	1 cut(s)	1186
AflIII	ACRYGT	1 cut(s)	1341
AgsI	TTSAA	6 cut(s)	278, 404, 481, 530, 1256, 1348
AhdI	GACNNNNNGTC	1 cut(s)	583
AjiI	CACGTC	1 cut(s)	1297
AjnI	CCWGG	3 cut(s)	223, 620, 868
AluBI	AGCT	9 cut(s)	10, 16, 104, 194, 299, 310, 353, 455, 1214
AluI	AGCT	9 cut(s)	10, 16, 104, 194, 299, 310, 353, 455, 1214
Alw26I	GTCTC	3 cut(s)	24, 383, 491
AlwI	GGATC	1 cut(s)	1107
AlwNI	CAGNNNCTG	1 cut(s)	1217
AoxI	GGCC	4 cut(s)	130, 240, 339, 434
ApeKI	GCWGC	4 cut(s)	152, 452, 1214, 1217
ApoI	RAATTY	2 cut(s)	792, 1089
AspLEI	GCGC	4 cut(s)	51, 59, 145, 147
AspS9I	GGNCC	5 cut(s)	130, 340, 421, 647, 892
AsuC2I	CCSGG	1 cut(s)	74
AsuHPI	GGTGA	5 cut(s)	385, 419, 800, 1054, 1097
AsuII	TTCGAA	1 cut(s)	458
AvaII	GGWCC	3 cut(s)	421, 647, 892
BaeGI	GKGCMC	1 cut(s)	674
BanI	GGYRCC	1 cut(s)	515
BauI	CACGAG	1 cut(s)	105
BbsI	GAAGAC	2 cut(s)	467, 488
BbvI	GCAGC	4 cut(s)	139, 464, 1201, 1204
BceAI	ACGGC	3 cut(s)	153, 255, 268
BciT130I	CCWGG	3 cut(s)	225, 622, 870
BclI	TGATCA	1 cut(s)	174
BcnI	CCSGG	1 cut(s)	74
BcoDI	GTCTC	3 cut(s)	24, 383, 491
BfaI	CTAG	1 cut(s)	98
BfmI	CTRYAG	1 cut(s)	167
BfrI	CTTAAG	1 cut(s)	1186
BisI	GCNGC	5 cut(s)	141, 153, 453, 1215, 1218
BlsI	GCNGC	5 cut(s)	142, 154, 454, 1216, 1219
Bme1390I	CCNGG	4 cut(s)	74, 225, 622, 870
Bme18I	GGWCC	3 cut(s)	421, 647, 892
BmeRI	GACNNNNNGTC	1 cut(s)	583
BmgBI	CACGTC	1 cut(s)	1297
BmgT120I	GGNCC	5 cut(s)	130, 340, 421, 647, 892
BmiI	GGNNCC	4 cut(s)	229, 517, 648, 954
BmrFI	CCNGG	4 cut(s)	74, 225, 622, 870
BmrI	ACTGGG	2 cut(s)	278, 474
BmsI	GCATC	5 cut(s)	336, 628, 1168, 1190, 1342
BmuI	ACTGGG	2 cut(s)	278, 474
BpiI	GAAGAC	2 cut(s)	467, 488
Bpu14I	TTCGAA	1 cut(s)	458
BpuEI	CTTGAG	1 cut(s)	341
BpuMI	CCSGG	1 cut(s)	74
Bsa29I	ATCGAT	1 cut(s)	885
BsaHI	GRCGYC	1 cut(s)	584
BsaJI	CCNNGG	5 cut(s)	73, 336, 600, 642, 1021
BsaXI	ACNNNNNCTCC	2 cut(s)	488, 518
Bsc4I	CCNNNNNNNGG	6 cut(s)	72, 73, 139, 230, 627, 679
Bse118I	RCCGGY	3 cut(s)	155, 230, 432
Bse1I	ACTGG	3 cut(s)	273, 469, 790
Bse3DI	GCAATG	2 cut(s)	243, 709
BseBI	CCWGG	3 cut(s)	225, 622, 870
BseCI	ATCGAT	1 cut(s)	885
BseDI	CCNNGG	5 cut(s)	73, 336, 600, 642, 1021
BseGI	GGATG	6 cut(s)	69, 129, 261, 568, 1181, 1197
BseLI	CCNNNNNNNGG	6 cut(s)	72, 73, 139, 230, 627, 679
BseMI	GCAATG	2 cut(s)	243, 709
BseMII	CTCAG	1 cut(s)	1082
BseNI	ACTGG	3 cut(s)	273, 469, 790
BsePI	GCGCGC	1 cut(s)	143
BseSI	GKGCMC	1 cut(s)	674
BseXI	GCAGC	4 cut(s)	139, 464, 1201, 1204
BseYI	CCCAGC	1 cut(s)	299
BsgI	GTGCAG	3 cut(s)	471, 572, 686
Bsh1236I	CGCG	1 cut(s)	145
BshFI	GGCC	4 cut(s)	132, 242, 341, 436
BshNI	GGYRCC	1 cut(s)	515
BshVI	ATCGAT	1 cut(s)	885
BsiSI	CCGG	4 cut(s)	73, 156, 231, 433
BslFI	GGGAC	3 cut(s)	90, 644, 660
BslI	CCNNNNNNNGG	6 cut(s)	72, 73, 139, 230, 627, 679
BsmAI	GTCTC	3 cut(s)	24, 383, 491
BsmBI	CGTCTC	2 cut(s)	383, 491
BsmFI	GGGAC	3 cut(s)	90, 644, 660
BsnI	GGCC	4 cut(s)	132, 242, 341, 436
Bsp119I	TTCGAA	1 cut(s)	458
Bsp1286I	GDGCHC	1 cut(s)	674
Bsp143I	GATC	5 cut(s)	174, 1036, 1045, 1112, 1304
Bsp19I	CCATGG	2 cut(s)	642, 1021
BspACI	CCGC	4 cut(s)	5, 140, 558, 1237
BspANI	GGCC	4 cut(s)	132, 242, 341, 436
BspCNI	CTCAG	1 cut(s)	1081
BspDI	ATCGAT	1 cut(s)	885
BspFNI	CGCG	1 cut(s)	145
BspHI	TCATGA	1 cut(s)	724
BspLI	GGNNCC	4 cut(s)	229, 517, 648, 954
BspPI	GGATC	1 cut(s)	1107
BspT104I	TTCGAA	1 cut(s)	458
BspT107I	GGYRCC	1 cut(s)	515
BspTI	CTTAAG	1 cut(s)	1186
BsrBI	CCGCTC	1 cut(s)	558
BsrDI	GCAATG	2 cut(s)	243, 709
BsrFI	RCCGGY	3 cut(s)	155, 230, 432
BsrI	ACTGG	3 cut(s)	273, 469, 790
BssAI	RCCGGY	3 cut(s)	155, 230, 432
BssECI	CCNNGG	5 cut(s)	73, 336, 600, 642, 1021
BssHII	GCGCGC	1 cut(s)	143
BssMI	GATC	5 cut(s)	174, 1036, 1045, 1112, 1304
BssNI	GRCGYC	1 cut(s)	584
BssSI	CACGAG	1 cut(s)	105
BssT1I	CCWWGG	3 cut(s)	600, 642, 1021
Bst2BI	CACGAG	1 cut(s)	105
Bst2UI	CCWGG	3 cut(s)	225, 622, 870
Bst4CI	ACNGT	1 cut(s)	502
Bst6I	CTCTTC	2 cut(s)	381, 1137
BstACI	GRCGYC	1 cut(s)	584
BstAFI	CTTAAG	1 cut(s)	1186
BstBI	TTCGAA	1 cut(s)	458
BstC8I	GCNNGC	5 cut(s)	145, 351, 438, 1052, 1228
BstDEI	CTNAG	2 cut(s)	261, 1068
BstDSI	CCRYGG	2 cut(s)	642, 1021
BstF5I	GGATG	6 cut(s)	69, 129, 261, 568, 1181, 1197
BstFNI	CGCG	1 cut(s)	145
BstHHI	GCGC	4 cut(s)	51, 59, 145, 147
BstKTI	GATC	5 cut(s)	177, 1039, 1048, 1115, 1307
BstMAI	GTCTC	3 cut(s)	24, 383, 491
BstMBI	GATC	5 cut(s)	174, 1036, 1045, 1112, 1304
BstMWI	GCNNNNNNNGC	8 cut(s)	101, 149, 200, 280, 296, 316, 452, 1223
BstNI	CCWGG	3 cut(s)	225, 622, 870
BstNSI	RCATGY	2 cut(s)	1230, 1345
BstSCI	CCNGG	4 cut(s)	72, 223, 620, 868
BstSFI	CTRYAG	1 cut(s)	167
BstSLI	GKGCMC	1 cut(s)	674
BstUI	CGCG	1 cut(s)	145
BstV1I	GCAGC	4 cut(s)	139, 464, 1201, 1204
BstV2I	GAAGAC	2 cut(s)	467, 488
BstX2I	RGATCY	1 cut(s)	1112
BstXI	CCANNNNNNTGG	1 cut(s)	250
BstYI	RGATCY	1 cut(s)	1112
Bsu15I	ATCGAT	1 cut(s)	885
BsuRI	GGCC	4 cut(s)	132, 242, 341, 436
BsuTUI	ATCGAT	1 cut(s)	885
BtgI	CCRYGG	2 cut(s)	642, 1021
BtgZI	GCGATG	2 cut(s)	263, 305
BtrI	CACGTC	1 cut(s)	1297
BtsCI	GGATG	6 cut(s)	69, 129, 261, 568, 1181, 1197
BtsI	GCAGTG	1 cut(s)	674
BtsIMutI	CAGTG	2 cut(s)	266, 674
Cac8I	GCNNGC	5 cut(s)	145, 351, 438, 1052, 1228
CaiI	CAGNNNCTG	1 cut(s)	1217
CciI	TCATGA	1 cut(s)	724
CfoI	GCGC	4 cut(s)	51, 59, 145, 147
Cfr10I	RCCGGY	3 cut(s)	155, 230, 432
Cfr13I	GGNCC	5 cut(s)	130, 340, 421, 647, 892
ClaI	ATCGAT	1 cut(s)	885
CseI	GACGC	2 cut(s)	573, 703
Csp6I	GTAC	1 cut(s)	1339
CviAII	CATG	6 cut(s)	643, 725, 1022, 1227, 1342, 1378
CviQI	GTAC	1 cut(s)	1339
DdeI	CTNAG	2 cut(s)	261, 1068
DpnI	GATC	5 cut(s)	176, 1038, 1047, 1114, 1306
DpnII	GATC	5 cut(s)	174, 1036, 1045, 1112, 1304
DriI	GACNNNNNGTC	1 cut(s)	583
EaeI	YGGCCR	1 cut(s)	240
Eam1104I	CTCTTC	2 cut(s)	381, 1137
Eam1105I	GACNNNNNGTC	1 cut(s)	583
EarI	CTCTTC	2 cut(s)	381, 1137
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	3 cut(s)	600, 642, 1021
Eco47I	GGWCC	3 cut(s)	421, 647, 892
Eco57I	CTGAAG	1 cut(s)	1161
EcoO109I	RGGNCCY	1 cut(s)	340
EcoRII	CCWGG	3 cut(s)	223, 620, 868
EcoT14I	CCWWGG	3 cut(s)	600, 642, 1021
EcoT22I	ATGCAT	1 cut(s)	1183
ErhI	CCWWGG	3 cut(s)	600, 642, 1021
Esp3I	CGTCTC	2 cut(s)	383, 491
FaeI	CATG	6 cut(s)	646, 728, 1025, 1230, 1345, 1381
FaqI	GGGAC	3 cut(s)	90, 644, 660
FatI	CATG	6 cut(s)	642, 724, 1021, 1226, 1341, 1377
FauI	CCCGC	1 cut(s)	551
FauNDI	CATATG	1 cut(s)	897
FbaI	TGATCA	1 cut(s)	174
Fnu4HI	GCNGC	5 cut(s)	141, 153, 453, 1215, 1218
FokI	GGATG	6 cut(s)	56, 136, 268, 575, 1168, 1184
Fsp4HI	GCNGC	5 cut(s)	141, 153, 453, 1215, 1218
FspBI	CTAG	1 cut(s)	98
GlaI	GCGC	4 cut(s)	50, 58, 144, 146
GluI	GCNGC	5 cut(s)	141, 153, 453, 1215, 1218
GsaI	CCCAGC	1 cut(s)	303
HaeIII	GGCC	4 cut(s)	132, 242, 341, 436
HapII	CCGG	4 cut(s)	73, 156, 231, 433
HgaI	GACGC	2 cut(s)	573, 703
HhaI	GCGC	4 cut(s)	51, 59, 145, 147
Hin1I	GRCGYC	1 cut(s)	584
Hin1II	CATG	6 cut(s)	646, 728, 1025, 1230, 1345, 1381
Hin6I	GCGC	4 cut(s)	49, 57, 143, 145
HinP1I	GCGC	4 cut(s)	49, 57, 143, 145
HincII	GTYRAC	1 cut(s)	1161
HindII	GTYRAC	1 cut(s)	1161
HindIII	AAGCTT	1 cut(s)	351
HinfI	GANTC	6 cut(s)	25, 89, 378, 1027, 1099, 1333
HpaII	CCGG	4 cut(s)	73, 156, 231, 433
HphI	GGTGA	5 cut(s)	385, 419, 800, 1054, 1097
Hpy166II	GTNNAC	2 cut(s)	1161, 1279
Hpy188I	TCNGA	6 cut(s)	22, 118, 802, 998, 1141, 1332
Hpy188III	TCNNGA	7 cut(s)	29, 86, 107, 424, 725, 1103, 1386
Hpy8I	GTNNAC	2 cut(s)	1161, 1279
Hpy99I	CGWCG	1 cut(s)	490
HpyAV	CCTTC	8 cut(s)	176, 355, 398, 535, 541, 842, 847, 1234
HpyCH4III	ACNGT	1 cut(s)	502
HpyCH4IV	ACGT	2 cut(s)	476, 1296
HpyCH4V	TGCA	9 cut(s)	349, 452, 553, 667, 688, 709, 1181, 1220, 1381
HpyF10VI	GCNNNNNNNGC	8 cut(s)	101, 149, 200, 280, 296, 316, 452, 1223
HpyF3I	CTNAG	2 cut(s)	261, 1068
HpySE526I	ACGT	2 cut(s)	476, 1296
Hsp92I	GRCGYC	1 cut(s)	584
Hsp92II	CATG	6 cut(s)	646, 728, 1025, 1230, 1345, 1381
HspAI	GCGC	4 cut(s)	49, 57, 143, 145
Ksp22I	TGATCA	1 cut(s)	174
Kzo9I	GATC	5 cut(s)	174, 1036, 1045, 1112, 1304
LmnI	GCTCC	2 cut(s)	7, 958
Lsp1109I	GCAGC	4 cut(s)	139, 464, 1201, 1204
LweI	GCATC	5 cut(s)	336, 628, 1168, 1190, 1342
MaeI	CTAG	1 cut(s)	98
MaeII	ACGT	2 cut(s)	476, 1296
MaeIII	GTNAC	2 cut(s)	264, 715
MalI	GATC	5 cut(s)	176, 1038, 1047, 1114, 1306
MbiI	CCGCTC	1 cut(s)	558
MboI	GATC	5 cut(s)	174, 1036, 1045, 1112, 1304
MboII	GAAGA	9 cut(s)	199, 398, 472, 493, 604, 1133, 1136, 1154, 1373
MfeI	CAATTG	1 cut(s)	1032
MflI	RGATCY	1 cut(s)	1112
MhlI	GDGCHC	1 cut(s)	674
MluCI	AATT	8 cut(s)	396, 470, 659, 792, 861, 957, 1032, 1089
MlyI	GAGTC	3 cut(s)	34, 83, 1342
Mph1103I	ATGCAT	1 cut(s)	1183
MseI	TTAA	3 cut(s)	657, 1187, 1269
MslI	CAYNNNNRTG	2 cut(s)	248, 1225
MspA1I	CMGCKG	1 cut(s)	1214
MspCI	CTTAAG	1 cut(s)	1186
MspI	CCGG	4 cut(s)	73, 156, 231, 433
MspR9I	CCNGG	4 cut(s)	74, 225, 622, 870
MunI	CAATTG	1 cut(s)	1032
MvaI	CCWGG	3 cut(s)	225, 622, 870
MvnI	CGCG	1 cut(s)	145
MwoI	GCNNNNNNNGC	8 cut(s)	101, 149, 200, 280, 296, 316, 452, 1223
NciI	CCSGG	1 cut(s)	74
NcoI	CCATGG	2 cut(s)	642, 1021
NdeI	CATATG	1 cut(s)	897
NdeII	GATC	5 cut(s)	174, 1036, 1045, 1112, 1304
NlaIII	CATG	6 cut(s)	646, 728, 1025, 1230, 1345, 1381
NlaIV	GGNNCC	4 cut(s)	229, 517, 648, 954
NmuCI	GTSAC	2 cut(s)	264, 715
NsiI	ATGCAT	1 cut(s)	1183
NspI	RCATGY	2 cut(s)	1230, 1345
NspV	TTCGAA	1 cut(s)	458
PaeI	GCATGC	1 cut(s)	1230
PagI	TCATGA	1 cut(s)	724
PauI	GCGCGC	1 cut(s)	143
PciI	ACATGT	1 cut(s)	1341
PcsI	WCGNNNNNNNCGW	3 cut(s)	245, 287, 482
PfeI	GAWTC	3 cut(s)	378, 1027, 1099
PflFI	GACNNNGTC	1 cut(s)	81
PkrI	GCNGC	5 cut(s)	142, 154, 454, 1216, 1219
PleI	GAGTC	3 cut(s)	33, 83, 1341
PpsI	GAGTC	3 cut(s)	33, 83, 1341
PscI	ACATGT	1 cut(s)	1341
Psp6I	CCWGG	3 cut(s)	223, 620, 868
PspFI	CCCAGC	1 cut(s)	299
PspGI	CCWGG	3 cut(s)	223, 620, 868
PspN4I	GGNNCC	4 cut(s)	229, 517, 648, 954
PspPI	GGNCC	5 cut(s)	130, 340, 421, 647, 892
PstNI	CAGNNNCTG	1 cut(s)	1217
PsuI	RGATCY	1 cut(s)	1112
PsyI	GACNNNGTC	1 cut(s)	81
PteI	GCGCGC	1 cut(s)	143
PvuII	CAGCTG	1 cut(s)	1214
RsaI	GTAC	1 cut(s)	1340
RsaNI	GTAC	1 cut(s)	1339
RseI	CAYNNNNRTG	2 cut(s)	248, 1225
SaqAI	TTAA	3 cut(s)	657, 1187, 1269
SatI	GCNGC	5 cut(s)	141, 153, 453, 1215, 1218
Sau3AI	GATC	5 cut(s)	174, 1036, 1045, 1112, 1304
Sau96I	GGNCC	5 cut(s)	130, 340, 421, 647, 892
SchI	GAGTC	3 cut(s)	34, 83, 1342
ScrFI	CCNGG	4 cut(s)	74, 225, 622, 870
SduI	GDGCHC	1 cut(s)	674
SfaNI	GCATC	5 cut(s)	336, 628, 1168, 1190, 1342
SfcI	CTRYAG	1 cut(s)	167
SfuI	TTCGAA	1 cut(s)	458
SinI	GGWCC	3 cut(s)	421, 647, 892
SmiMI	CAYNNNNRTG	2 cut(s)	248, 1225
SmlI	CTYRAG	2 cut(s)	320, 1186
SmoI	CTYRAG	2 cut(s)	320, 1186
SphI	GCATGC	1 cut(s)	1230
Sse9I	AATT	8 cut(s)	396, 470, 659, 792, 861, 957, 1032, 1089
SsiI	CCGC	4 cut(s)	5, 140, 558, 1237
SspMI	CTAG	1 cut(s)	98
StyD4I	CCNGG	4 cut(s)	72, 223, 620, 868
StyI	CCWWGG	3 cut(s)	600, 642, 1021
TaaI	ACNGT	1 cut(s)	502
TaiI	ACGT	2 cut(s)	479, 1299
TaqI	TCGA	4 cut(s)	28, 458, 626, 885
TaqII	GACCGA	2 cut(s)	350, 664
TasI	AATT	8 cut(s)	396, 470, 659, 792, 861, 957, 1032, 1089
TatI	WGTACW	1 cut(s)	1338
TauI	GCSGC	1 cut(s)	143
TfiI	GAWTC	3 cut(s)	378, 1027, 1099
Tru1I	TTAA	3 cut(s)	657, 1187, 1269
Tru9I	TTAA	3 cut(s)	657, 1187, 1269
TscAI	CASTG	2 cut(s)	273, 674
TseFI	GTSAC	2 cut(s)	264, 715
TseI	GCWGC	4 cut(s)	152, 452, 1214, 1217
Tsp45I	GTSAC	2 cut(s)	264, 715
TspDTI	ATGAA	3 cut(s)	713, 909, 1374
TspGWI	ACGGA	2 cut(s)	407, 503
TspRI	CASTG	2 cut(s)	273, 674
Tth111I	GACNNNGTC	1 cut(s)	81
Vha464I	CTTAAG	1 cut(s)	1186
VpaK11BI	GGWCC	3 cut(s)	421, 647, 892
XapI	RAATTY	2 cut(s)	792, 1089
XceI	RCATGY	2 cut(s)	1230, 1345
XspI	CTAG	1 cut(s)	98
Zsp2I	ATGCAT	1 cut(s)	1183

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.