Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001576

Physical Location & Seq

Genomic Coordinates Forward (+)

19278153 .. 19281999

Gene Structure 3847 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000017626

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGAGTGTAAAACTCTCTGCTCCCTCTCTCTCTCTCTCTTACAAAACCCTAACCAGTGACACTAGTCCGCCCACATTCCTCCCAATCTTTGCCGCCAAAACAGCCATGGCGGAGCTAAAGCTCTCGGAGAGTCGAGACTTGACCCGAATAGAGCGCATAGGTGCACACTCCCACATCCGGGGACTTGGTCTTGACTCTGCCTTAGAAGCTCGTGATGTTTCGGAGGGGATGGTGGGCCAGACGGCGGCGCGGAAGGCTGCCGGTGTGATACTTCAGATGATCAAGGAAGGGAAGATAGCTGGACGGGCTGTGTTGTTGGCTGGACAGCCTGGCACCGGCAAGACGGCCATTGCGATGGGGATGGCTAAGTCACTGGGGCTTGAAACGCCGTTTGCCATGTTAGCTGGGAGTGAGCTATTTTCGCTTGAGATGGGCAAGACCGAGGCCCTGATGCAAGCTTTTAGGAAGGCTATTGGGGTGAGAATCAAGGAGGAGACGGAAATTATTGAAGGTGAGGTGGTGGAGGTCCAGATTGACCGGCCTGCGGTGGCTGGAGCAGCTTCCAAGACTGGGAAATTGACATTGAAGACGACGGAGATGGAGACCGTGTATGACTTGGGTGCCAAGATGATTGAAGCATTGGGGAAGGAGAAGGTGCAGAGTGGGGACGTGGTTGCCATTGACAAGGCGTCTGGGAAGATTACCAAGGTCGGTAGGTCATTTTCCAGGTCGAGGGACTATGATGCCATGGGACCGAGTGTTAAATTAGTGCAGTGCCCTGACGGGGAGTTGCAGAAGCGTAAGGAGGTTGTGCATTGCGTCACACTTCATGAGATAGATGTCATCAACAGCAGAACACAAGGATTTCTGGCTCTCTTTACAGGAGATACTGGTGAAATTCGTTCAGAAGTGAGAGAACAGATTGACACAAAGGTAGCAGAGTGGAGGGAGGAAGGGAAGGCAGAAATTGTGCCAGGTGTTCTCTTTATCGATGAGGTCCATATGCTTGACATTGAGTGCTTTTCATTTCTGAATCGTGCTTTGGAGAATGAGATGGCTCCAATTTTAGTTGTTGCTACGAACAGAGGGATCACTACGATCAGAGGCACAAACTATAAATCTCCCCATGGTATTCCAATTGATCTCCTTGATCGCCTGCTTATTATCACCACTCAGCCTTATACAGAGAGTGAAATTCGCAAGATTCTTGACATAAGATCCCAAGAAGAAGAAGTTGAGATGTCTGAAGAGGCAAAGCATTTGTTGACCAAGATTGGTGTAGATGCATCCTTGAGATATGCCATCCATCTCATAACAGCTGCTGCATTGGCATGCCAAAAGCGGAAGGGAAAGATTGTTGAAATGGAGGATATTAACCGAGTATACCATCTCTTCTTGGACGTGAAGCGATCAACACAATACTTGATGGAGTATCAGAGTCAGTACATGTTTAATGATGCTGATGAAGATGATAACAATGCCATGCAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0000812 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0031974 GO:0031981 GO:0032991 GO:0034708 GO:0035097 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044665 GO:0070013 GO:0070603 GO:0071339 GO:0097346 GO:1902494 GO:1904949 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TIP49

Protein Analysis

498

Amino Acids

54.61

Weight (kDa)

5.61

Isoelectric Point (pI)

41.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIP49	PF06068	52 - 396	1.7e-165	TIP49 P-loop domain
DnaB_C	PF03796	96 - 228	1.5e-06	DnaB-like helicase C terminal domain
AAA	PF00004	104 - 155	4e-06	ATPase family associated with various cellular activities (AAA)
TIP49_C	PF17856	402 - 467	2.7e-25	TIP49 AAA-lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49830 AT5G67630
fragaria_vesca	FvH4_1g17590
malus_domestica	MD02G1184700.v1.1 MD08G1213300.v1.1
prunus_persica	Prupe.1G544700_v2.0.a1
pyrus_communis	pycom02g14980 pycom15g25960
rosa_chinensis	RchiOBHm_Chr2g0107901 RchiOBHm_Chr6g0265871 RchiOBHm_Chr6g0265881 RchiOBHm_Chr6g0265891 RchiOBHm_Chr6g0265911
rosa_laevigata	RLG00000014147 RLG00000014151 RLG00000014152 RLG00000017626 RLG00000030880
rosa_multiflora	Rmu_sc0000149.1_g000017 Rmu_sc0001484.1_g000033 Rmu_sc0006952.1_g000010 Rmu_sc0006952.1_g000012 Rmu_sc0006952.1_g000034 Rmu_sc0013320.1_g000004 Rmu_sc0013320.1_g000009
rosa_roxburghii	Rroxscaffold_2G00135810 Rroxscaffold_7G00202230 Rroxscaffold_7G00202270 Rroxscaffold_7G00202280 Rroxscaffold_7G00202290
rosa_rugosa	Rorug02G0148600 Rorug02G0148600 Rorug06G0021100 Rorug06G0021100 Rorug06G0021300
rosa_samantha	Rh2AG197900 Rh2BG210800 Rh2CG202600 Rh2DG205600 Rh6BG142600 Rh6BG142700 Rh6CG139200 Rh6CG139300 Rh6DG126800 Rh6DG126900
rosa_wichuraiana	Rw0G009670 Rw0G009680 Rw2G015700 Rw6G012330 Rw6G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	332, 620
AccI	GTMKAC	1 cut(s)	1383
AccII	CGCG	1 cut(s)	250
AciI	CCGC	7 cut(s)	68, 93, 110, 245, 250, 545, 1342
AclWI	GGATC	2 cut(s)	1097, 1212
AcoI	YGGCCR	1 cut(s)	345
AcsI	RAATTY	2 cut(s)	897, 1194
AcuI	CTGAAG	2 cut(s)	257, 1266
AcyI	GRCGYC	1 cut(s)	689
AfaI	GTAC	1 cut(s)	1445
AfiI	CCNNNNNNNGG	8 cut(s)	177, 178, 244, 335, 544, 570, 732, 784
AflIII	ACRYGT	1 cut(s)	1446
AgsI	TTSAA	5 cut(s)	383, 509, 586, 635, 1361
AhdI	GACNNNNNGTC	1 cut(s)	688
AhlI	ACTAGT	1 cut(s)	62
AjiI	CACGTC	2 cut(s)	670, 1402
AjnI	CCWGG	3 cut(s)	328, 725, 973
AjuI	GAANNNNNNNTTGG	2 cut(s)	1025, 1057
AluBI	AGCT	9 cut(s)	115, 121, 209, 299, 404, 415, 458, 560, 1319
AluI	AGCT	9 cut(s)	115, 121, 209, 299, 404, 415, 458, 560, 1319
Alw21I	GWGCWC	1 cut(s)	166
Alw26I	GTCTC	3 cut(s)	129, 488, 596
Alw44I	GTGCAC	1 cut(s)	162
AlwI	GGATC	2 cut(s)	1097, 1212
AlwNI	CAGNNNCTG	1 cut(s)	1322
AoxI	GGCC	4 cut(s)	235, 345, 444, 539
ApaLI	GTGCAC	1 cut(s)	162
ApeKI	GCWGC	4 cut(s)	257, 557, 1319, 1322
ApoI	RAATTY	2 cut(s)	897, 1194
AspLEI	GCGC	2 cut(s)	156, 250
AspS9I	GGNCC	5 cut(s)	235, 445, 526, 752, 997
AsuC2I	CCSGG	1 cut(s)	179
AsuHPI	GGTGA	4 cut(s)	490, 524, 905, 1159
AvaII	GGWCC	3 cut(s)	526, 752, 997
BaeGI	GKGCMC	2 cut(s)	166, 779
BanI	GGYRCC	2 cut(s)	332, 620
BauI	CACGAG	1 cut(s)	210
BbsI	GAAGAC	1 cut(s)	593
Bbv12I	GWGCWC	1 cut(s)	166
BbvI	GCAGC	4 cut(s)	244, 569, 1306, 1309
BceAI	ACGGC	3 cut(s)	258, 360, 373
BciT130I	CCWGG	3 cut(s)	330, 727, 975
BclI	TGATCA	1 cut(s)	279
BcnI	CCSGG	1 cut(s)	179
BcoDI	GTCTC	3 cut(s)	129, 488, 596
BcuI	ACTAGT	1 cut(s)	62
BfaI	CTAG	1 cut(s)	63
BisI	GCNGC	6 cut(s)	93, 246, 258, 558, 1320, 1323
BlsI	GCNGC	6 cut(s)	94, 247, 259, 559, 1321, 1324
Bme1390I	CCNGG	4 cut(s)	179, 330, 727, 975
Bme18I	GGWCC	3 cut(s)	526, 752, 997
BmeRI	GACNNNNNGTC	1 cut(s)	688
BmgBI	CACGTC	2 cut(s)	670, 1402
BmgT120I	GGNCC	5 cut(s)	235, 445, 526, 752, 997
BmiI	GGNNCC	4 cut(s)	334, 622, 753, 1059
BmrFI	CCNGG	4 cut(s)	179, 330, 727, 975
BmrI	ACTGGG	2 cut(s)	383, 579
BmsI	GCATC	5 cut(s)	441, 733, 1273, 1295, 1447
BmuI	ACTGGG	2 cut(s)	383, 579
BoxI	GACNNNNGTC	1 cut(s)	63
BpiI	GAAGAC	1 cut(s)	593
BpmI	CTGGAG	1 cut(s)	573
BpuEI	CTTGAG	2 cut(s)	446, 1312
BpuMI	CCSGG	1 cut(s)	179
Bsa29I	ATCGAT	1 cut(s)	990
BsaHI	GRCGYC	1 cut(s)	689
BsaI	GGTCTC	1 cut(s)	596
BsaJI	CCNNGG	6 cut(s)	105, 178, 441, 705, 747, 1126
BsaXI	ACNNNNNCTCC	2 cut(s)	593, 623
Bsc4I	CCNNNNNNNGG	8 cut(s)	177, 178, 244, 335, 544, 570, 732, 784
Bse118I	RCCGGY	3 cut(s)	260, 335, 537
Bse1I	ACTGG	4 cut(s)	54, 378, 574, 895
Bse3DI	GCAATG	2 cut(s)	348, 814
BseBI	CCWGG	3 cut(s)	330, 727, 975
BseCI	ATCGAT	1 cut(s)	990
BseDI	CCNNGG	6 cut(s)	105, 178, 441, 705, 747, 1126
BseGI	GGATG	5 cut(s)	174, 234, 366, 1286, 1302
BseLI	CCNNNNNNNGG	8 cut(s)	177, 178, 244, 335, 544, 570, 732, 784
BseMI	GCAATG	2 cut(s)	348, 814
BseMII	CTCAG	1 cut(s)	1187
BseNI	ACTGG	4 cut(s)	54, 378, 574, 895
BseRI	GAGGAG	1 cut(s)	506
BseSI	GKGCMC	2 cut(s)	166, 779
BseXI	GCAGC	4 cut(s)	244, 569, 1306, 1309
BseYI	CCCAGC	1 cut(s)	404
BsgI	GTGCAG	2 cut(s)	677, 791
Bsh1236I	CGCG	1 cut(s)	250
BshFI	GGCC	4 cut(s)	237, 347, 446, 541
BshNI	GGYRCC	2 cut(s)	332, 620
BshVI	ATCGAT	1 cut(s)	990
BsiHKAI	GWGCWC	1 cut(s)	166
BsiSI	CCGG	4 cut(s)	178, 261, 336, 538
BslFI	GGGAC	4 cut(s)	195, 680, 749, 765
BslI	CCNNNNNNNGG	8 cut(s)	177, 178, 244, 335, 544, 570, 732, 784
BsmAI	GTCTC	3 cut(s)	129, 488, 596
BsmBI	CGTCTC	1 cut(s)	488
BsmFI	GGGAC	4 cut(s)	195, 680, 749, 765
BsnI	GGCC	4 cut(s)	237, 347, 446, 541
Bso31I	GGTCTC	1 cut(s)	596
Bsp1286I	GDGCHC	2 cut(s)	166, 779
Bsp143I	GATC	7 cut(s)	279, 1089, 1098, 1141, 1150, 1217, 1409
Bsp19I	CCATGG	3 cut(s)	105, 747, 1126
BspACI	CCGC	7 cut(s)	68, 93, 110, 245, 250, 545, 1342
BspANI	GGCC	4 cut(s)	237, 347, 446, 541
BspCNI	CTCAG	1 cut(s)	1186
BspDI	ATCGAT	1 cut(s)	990
BspFNI	CGCG	1 cut(s)	250
BspHI	TCATGA	1 cut(s)	829
BspLI	GGNNCC	4 cut(s)	334, 622, 753, 1059
BspPI	GGATC	2 cut(s)	1097, 1212
BspT107I	GGYRCC	2 cut(s)	332, 620
BspTNI	GGTCTC	1 cut(s)	596
BsrDI	GCAATG	2 cut(s)	348, 814
BsrFI	RCCGGY	3 cut(s)	260, 335, 537
BsrI	ACTGG	4 cut(s)	54, 378, 574, 895
BssAI	RCCGGY	3 cut(s)	260, 335, 537
BssECI	CCNNGG	6 cut(s)	105, 178, 441, 705, 747, 1126
BssMI	GATC	7 cut(s)	279, 1089, 1098, 1141, 1150, 1217, 1409
BssNAI	GTATAC	1 cut(s)	1384
BssNI	GRCGYC	1 cut(s)	689
BssSI	CACGAG	1 cut(s)	210
BssT1I	CCWWGG	4 cut(s)	105, 705, 747, 1126
Bst1107I	GTATAC	1 cut(s)	1384
Bst2BI	CACGAG	1 cut(s)	210
Bst2UI	CCWGG	3 cut(s)	330, 727, 975
Bst4CI	ACNGT	1 cut(s)	607
Bst6I	CTCTTC	2 cut(s)	1242, 1397
BstACI	GRCGYC	1 cut(s)	689
BstC8I	GCNNGC	4 cut(s)	456, 543, 1157, 1333
BstDEI	CTNAG	3 cut(s)	202, 366, 1173
BstDSI	CCRYGG	3 cut(s)	105, 747, 1126
BstF5I	GGATG	5 cut(s)	174, 234, 366, 1286, 1302
BstFNI	CGCG	1 cut(s)	250
BstHHI	GCGC	2 cut(s)	156, 250
BstKTI	GATC	7 cut(s)	282, 1092, 1101, 1144, 1153, 1220, 1412
BstMAI	GTCTC	3 cut(s)	129, 488, 596
BstMBI	GATC	7 cut(s)	279, 1089, 1098, 1141, 1150, 1217, 1409
BstMWI	GCNNNNNNNGC	9 cut(s)	101, 206, 254, 305, 385, 401, 421, 557, 1328
BstNI	CCWGG	3 cut(s)	330, 727, 975
BstNSI	RCATGY	2 cut(s)	1335, 1450
BstPAI	GACNNNNGTC	1 cut(s)	63
BstSCI	CCNGG	4 cut(s)	177, 328, 725, 973
BstSLI	GKGCMC	2 cut(s)	166, 779
BstUI	CGCG	1 cut(s)	250
BstV1I	GCAGC	4 cut(s)	244, 569, 1306, 1309
BstV2I	GAAGAC	1 cut(s)	593
BstX2I	RGATCY	1 cut(s)	1217
BstXI	CCANNNNNNTGG	1 cut(s)	355
BstYI	RGATCY	1 cut(s)	1217
BstZ17I	GTATAC	1 cut(s)	1384
Bsu15I	ATCGAT	1 cut(s)	990
BsuRI	GGCC	4 cut(s)	237, 347, 446, 541
BsuTUI	ATCGAT	1 cut(s)	990
BtgI	CCRYGG	3 cut(s)	105, 747, 1126
BtgZI	GCGATG	1 cut(s)	368
BtrI	CACGTC	2 cut(s)	670, 1402
BtsCI	GGATG	5 cut(s)	174, 234, 366, 1286, 1302
BtsI	GCAGTG	1 cut(s)	779
BtsIMutI	CAGTG	3 cut(s)	61, 371, 779
Cac8I	GCNNGC	4 cut(s)	456, 543, 1157, 1333
CaiI	CAGNNNCTG	1 cut(s)	1322
CciI	TCATGA	1 cut(s)	829
CfoI	GCGC	2 cut(s)	156, 250
Cfr10I	RCCGGY	3 cut(s)	260, 335, 537
Cfr13I	GGNCC	5 cut(s)	235, 445, 526, 752, 997
ClaI	ATCGAT	1 cut(s)	990
CseI	GACGC	2 cut(s)	678, 808
Csp6I	GTAC	1 cut(s)	1444
CviAII	CATG	8 cut(s)	106, 397, 748, 830, 1127, 1332, 1447, 1483
CviQI	GTAC	1 cut(s)	1444
DdeI	CTNAG	3 cut(s)	202, 366, 1173
DpnI	GATC	7 cut(s)	281, 1091, 1100, 1143, 1152, 1219, 1411
DpnII	GATC	7 cut(s)	279, 1089, 1098, 1141, 1150, 1217, 1409
DriI	GACNNNNNGTC	1 cut(s)	688
EaeI	YGGCCR	1 cut(s)	345
Eam1104I	CTCTTC	2 cut(s)	1242, 1397
Eam1105I	GACNNNNNGTC	1 cut(s)	688
EarI	CTCTTC	2 cut(s)	1242, 1397
EciI	GGCGGA	2 cut(s)	57, 125
Eco130I	CCWWGG	4 cut(s)	105, 705, 747, 1126
Eco31I	GGTCTC	1 cut(s)	596
Eco47I	GGWCC	3 cut(s)	526, 752, 997
Eco57I	CTGAAG	2 cut(s)	257, 1266
EcoO109I	RGGNCCY	1 cut(s)	445
EcoRII	CCWGG	3 cut(s)	328, 725, 973
EcoT14I	CCWWGG	4 cut(s)	105, 705, 747, 1126
EcoT22I	ATGCAT	1 cut(s)	1288
ErhI	CCWWGG	4 cut(s)	105, 705, 747, 1126
Esp3I	CGTCTC	1 cut(s)	488
FaeI	CATG	8 cut(s)	109, 400, 751, 833, 1130, 1335, 1450, 1486
FaqI	GGGAC	4 cut(s)	195, 680, 749, 765
FatI	CATG	8 cut(s)	105, 396, 747, 829, 1126, 1331, 1446, 1482
FauNDI	CATATG	1 cut(s)	1002
FbaI	TGATCA	1 cut(s)	279
FblI	GTMKAC	1 cut(s)	1383
Fnu4HI	GCNGC	6 cut(s)	93, 246, 258, 558, 1320, 1323
FokI	GGATG	5 cut(s)	161, 241, 373, 1273, 1289
Fsp4HI	GCNGC	6 cut(s)	93, 246, 258, 558, 1320, 1323
FspBI	CTAG	1 cut(s)	63
GlaI	GCGC	2 cut(s)	155, 249
GluI	GCNGC	6 cut(s)	93, 246, 258, 558, 1320, 1323
GsaI	CCCAGC	1 cut(s)	408
GsuI	CTGGAG	1 cut(s)	573
HaeIII	GGCC	4 cut(s)	237, 347, 446, 541
HapII	CCGG	4 cut(s)	178, 261, 336, 538
HgaI	GACGC	2 cut(s)	678, 808
HhaI	GCGC	2 cut(s)	156, 250
Hin1I	GRCGYC	1 cut(s)	689
Hin1II	CATG	8 cut(s)	109, 400, 751, 833, 1130, 1335, 1450, 1486
Hin6I	GCGC	2 cut(s)	154, 248
HinP1I	GCGC	2 cut(s)	154, 248
HincII	GTYRAC	1 cut(s)	1266
HindII	GTYRAC	1 cut(s)	1266
HindIII	AAGCTT	1 cut(s)	456
HinfI	GANTC	6 cut(s)	130, 194, 483, 1033, 1204, 1438
HpaII	CCGG	4 cut(s)	178, 261, 336, 538
HphI	GGTGA	4 cut(s)	490, 524, 905, 1159
Hpy166II	GTNNAC	3 cut(s)	164, 1266, 1384
Hpy188I	TCNGA	8 cut(s)	127, 223, 276, 907, 1032, 1103, 1246, 1437
Hpy188III	TCNNGA	7 cut(s)	134, 191, 212, 529, 830, 1208, 1491
Hpy8I	GTNNAC	3 cut(s)	164, 1266, 1384
Hpy99I	CGWCG	1 cut(s)	595
HpyAV	CCTTC	9 cut(s)	247, 281, 460, 503, 640, 646, 947, 952, 1339
HpyCH4III	ACNGT	1 cut(s)	607
HpyCH4IV	ACGT	2 cut(s)	669, 1401
HpyCH4V	TGCA	9 cut(s)	164, 454, 658, 772, 793, 814, 1286, 1325, 1486
HpyF10VI	GCNNNNNNNGC	9 cut(s)	101, 206, 254, 305, 385, 401, 421, 557, 1328
HpyF3I	CTNAG	3 cut(s)	202, 366, 1173
HpySE526I	ACGT	2 cut(s)	669, 1401
Hsp92I	GRCGYC	1 cut(s)	689
Hsp92II	CATG	8 cut(s)	109, 400, 751, 833, 1130, 1335, 1450, 1486
HspAI	GCGC	2 cut(s)	154, 248
Ksp22I	TGATCA	1 cut(s)	279
Kzo9I	GATC	7 cut(s)	279, 1089, 1098, 1141, 1150, 1217, 1409
LmnI	GCTCC	4 cut(s)	25, 112, 554, 1063
Lsp1109I	GCAGC	4 cut(s)	244, 569, 1306, 1309
LweI	GCATC	5 cut(s)	441, 733, 1273, 1295, 1447
MaeI	CTAG	1 cut(s)	63
MaeII	ACGT	2 cut(s)	669, 1401
MaeIII	GTNAC	3 cut(s)	56, 369, 820
MalI	GATC	7 cut(s)	281, 1091, 1100, 1143, 1152, 1219, 1411
MboI	GATC	7 cut(s)	279, 1089, 1098, 1141, 1150, 1217, 1409
MboII	GAAGA	8 cut(s)	304, 598, 709, 1238, 1241, 1259, 1384, 1478
MfeI	CAATTG	1 cut(s)	1137
MflI	RGATCY	1 cut(s)	1217
MhlI	GDGCHC	2 cut(s)	166, 779
MluCI	AATT	8 cut(s)	501, 575, 764, 897, 966, 1062, 1137, 1194
MlyI	GAGTC	3 cut(s)	139, 188, 1447
Mph1103I	ATGCAT	1 cut(s)	1288
MseI	TTAA	3 cut(s)	762, 1374, 1452
MslI	CAYNNNNRTG	2 cut(s)	353, 1330
MspA1I	CMGCKG	1 cut(s)	1319
MspI	CCGG	4 cut(s)	178, 261, 336, 538
MspR9I	CCNGG	4 cut(s)	179, 330, 727, 975
MunI	CAATTG	1 cut(s)	1137
MvaI	CCWGG	3 cut(s)	330, 727, 975
MvnI	CGCG	1 cut(s)	250
MwoI	GCNNNNNNNGC	9 cut(s)	101, 206, 254, 305, 385, 401, 421, 557, 1328
NciI	CCSGG	1 cut(s)	179
NcoI	CCATGG	3 cut(s)	105, 747, 1126
NdeI	CATATG	1 cut(s)	1002
NdeII	GATC	7 cut(s)	279, 1089, 1098, 1141, 1150, 1217, 1409
NlaIII	CATG	8 cut(s)	109, 400, 751, 833, 1130, 1335, 1450, 1486
NlaIV	GGNNCC	4 cut(s)	334, 622, 753, 1059
NmuCI	GTSAC	3 cut(s)	56, 369, 820
NsiI	ATGCAT	1 cut(s)	1288
NspI	RCATGY	2 cut(s)	1335, 1450
PaeI	GCATGC	1 cut(s)	1335
PagI	TCATGA	1 cut(s)	829
PciI	ACATGT	1 cut(s)	1446
PcsI	WCGNNNNNNNCGW	1 cut(s)	350
PfeI	GAWTC	3 cut(s)	483, 1033, 1204
PflFI	GACNNNGTC	1 cut(s)	186
PkrI	GCNGC	6 cut(s)	94, 247, 259, 559, 1321, 1324
PleI	GAGTC	3 cut(s)	138, 188, 1446
PpsI	GAGTC	3 cut(s)	138, 188, 1446
PscI	ACATGT	1 cut(s)	1446
PshAI	GACNNNNGTC	1 cut(s)	63
Psp6I	CCWGG	3 cut(s)	328, 725, 973
PspFI	CCCAGC	1 cut(s)	404
PspGI	CCWGG	3 cut(s)	328, 725, 973
PspN4I	GGNNCC	4 cut(s)	334, 622, 753, 1059
PspPI	GGNCC	5 cut(s)	235, 445, 526, 752, 997
PstNI	CAGNNNCTG	1 cut(s)	1322
PsuI	RGATCY	1 cut(s)	1217
PsyI	GACNNNGTC	1 cut(s)	186
PvuII	CAGCTG	1 cut(s)	1319
RsaI	GTAC	1 cut(s)	1445
RsaNI	GTAC	1 cut(s)	1444
RseI	CAYNNNNRTG	2 cut(s)	353, 1330
SaqAI	TTAA	3 cut(s)	762, 1374, 1452
SatI	GCNGC	6 cut(s)	93, 246, 258, 558, 1320, 1323
Sau3AI	GATC	7 cut(s)	279, 1089, 1098, 1141, 1150, 1217, 1409
Sau96I	GGNCC	5 cut(s)	235, 445, 526, 752, 997
SchI	GAGTC	3 cut(s)	139, 188, 1447
ScrFI	CCNGG	4 cut(s)	179, 330, 727, 975
SduI	GDGCHC	2 cut(s)	166, 779
SfaNI	GCATC	5 cut(s)	441, 733, 1273, 1295, 1447
SinI	GGWCC	3 cut(s)	526, 752, 997
SmiMI	CAYNNNNRTG	2 cut(s)	353, 1330
SmlI	CTYRAG	2 cut(s)	425, 1291
SmoI	CTYRAG	2 cut(s)	425, 1291
SpeI	ACTAGT	1 cut(s)	62
SphI	GCATGC	1 cut(s)	1335
Sse9I	AATT	8 cut(s)	501, 575, 764, 897, 966, 1062, 1137, 1194
SsiI	CCGC	7 cut(s)	68, 93, 110, 245, 250, 545, 1342
SspMI	CTAG	1 cut(s)	63
StyD4I	CCNGG	4 cut(s)	177, 328, 725, 973
StyI	CCWWGG	4 cut(s)	105, 705, 747, 1126
TaaI	ACNGT	1 cut(s)	607
TaiI	ACGT	2 cut(s)	672, 1404
TaqI	TCGA	3 cut(s)	133, 731, 990
TaqII	GACCGA	2 cut(s)	455, 769
TasI	AATT	8 cut(s)	501, 575, 764, 897, 966, 1062, 1137, 1194
TatI	WGTACW	1 cut(s)	1443
TauI	GCSGC	2 cut(s)	95, 248
TfiI	GAWTC	3 cut(s)	483, 1033, 1204
Tru1I	TTAA	3 cut(s)	762, 1374, 1452
Tru9I	TTAA	3 cut(s)	762, 1374, 1452
TscAI	CASTG	3 cut(s)	61, 378, 779
TseFI	GTSAC	3 cut(s)	56, 369, 820
TseI	GCWGC	4 cut(s)	257, 557, 1319, 1322
Tsp45I	GTSAC	3 cut(s)	56, 369, 820
TspDTI	ATGAA	3 cut(s)	818, 1014, 1479
TspGWI	ACGGA	2 cut(s)	512, 608
TspRI	CASTG	3 cut(s)	61, 378, 779
Tth111I	GACNNNGTC	1 cut(s)	186
VneI	GTGCAC	1 cut(s)	162
VpaK11BI	GGWCC	3 cut(s)	526, 752, 997
XapI	RAATTY	2 cut(s)	897, 1194
XceI	RCATGY	2 cut(s)	1335, 1450
XcmI	CCANNNNNNNNNTGG	1 cut(s)	103
XmiI	GTMKAC	1 cut(s)	1383
XspI	CTAG	1 cut(s)	63
Zsp2I	ATGCAT	1 cut(s)	1288

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.