Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00383

Orthogroup ID

OG0001576

Physical Location & Seq

Genomic Coordinates Reverse (-)

11751 .. 14266

Gene Structure 2516 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G009670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGATGCGGAGAGCTGCTGCTGCTGCTTCTTCTTCTTATTGCAACAACAGAGGTAGAGGAGGAGGAGGTATGCCTTGTCTTCATTCTATTCTTGTTTCCCTTCATTCTCAAGCTTCAGTGGTCAGCACTATTAGAAACCCACCCAAGCTCACTAATCTTGGGGTTGGGGATGGCGTAAGTTTGTTCAATGAGATGCTTCAAATGCGTCCTCTTCCTTGTGTTGTCCGTTTCAATCAAATCATGGGTCACATCGCAAAATTGAAACATTATCAGGCGGTCATTTCTCTGTATACCCAAATGGATCGGCTAAGAGTTATTCCCGATGCTTACACTCTCAACATTATCATCAATTGCTTTTGTCATTTGAACCAAATGGGATTCAGTTTGTCTGTGTTGGGAAAATTCTTCAAATTTGGTATTCAACCAAATATCACAACCCTCAACACTCTTATCAAGGGCTTTTTCATTGAAGGGAAAGTGTCTCAGGCAGCACTACTTTTCAGCACAATGGTGGAGCAAGGTTGTAAGCCAAATGATGTTACTTTCGGAACGCTAATAAAGGGCTATTGCATGATGGGAAATAATACTGCAGCTGTTCAATTGCTTAGGAAGATGGAACAACAGTCTCGAGATTGTAAGCCTAGTGTGGTTGTCTATAATATCATCATTGACAGTCTCTGTAAGGATACACTAGTTCCTGATGCAGTTAAGCTCTTCTCAGAAATGATTTGTAGGGGTATAGCCCCTGACGTCATTACTTATACCTCTTTGATTCATGGAGTTTGCAAATTAGGCCAGTGGAAAGAAGCTACGAGATTGTTGAATGAGATGGTCAGTAAAGGTATCTTCCCGAATTTAGTAACCTTCAGTATCCTGGTCGATACACTTTGTAAGGAGGGGATGGTTGTGGAAGCACAAAGTGTGCTTGAAATGATGATTCAAAGAGGTATCAAACCTGATACAGTCACCTACAGTTCACTTATGGATGGCTACTGTCTGCGAGGAGAAATGGAGAAAGCTAAAGAGGTTTTTGATATGATGAATAGCAAGGGCTCCGTTGTTAATGCTTATAGTTATACCATACTGATAAATGGATATTGTAGGCGTAAAAGGATGAATGAGGCCATCAGGCTTTTTCAGGAAATGTCTGATAGGGGACTGGTTCCAAATACCGTCACATATACTGCTCTTATGGATGGTTTTTGCAAAGTGGGAAGAATACTAGATGCCCAGAGATTGTTCAGTAAGTTGCAAGCTTGTGGCCAAGTTCTTGATGTTCAAACTTATGCCGTTCTACTGGATGGCCTGTTTAAAAACCAACAACTTGCTATGGCAATGGAGTTGTTCGGGGAGTTGGAATGCATGAAGCTGGATTTGAATATAGTAATATACAGTACTCTTATTGAAGGTTTGTGTATAGCTGGAAAAATTGAATCTGCAAAGGACCACTTTTACGGTTTATCATCAAAAGGACTTGAACCTGATGCGAGGACGTACACTATAATGATCAAGGGACTTTGTGAAGGAGGCTTAATTAGTGAAGCAGAAAAGTTGCTTAGGGAAATGGAACAGAAAAGCGTTGCTCCTGATGATTGCACATATAACACAATTATCCGAGGGTTTCTCAATAATGACGAGACAGTAAAGGCAGTGGGACTTGTTCACGAAATGACGGACAGGGGTTTCTCTGCAGATGCATGGACGGTGGAATTAATCATTGGTTTATTGTCTAAAGAAAAAGTAGATCCTGCTTTGTTGTCATGGATAGAAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0000966 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004016 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009791 GO:0009845 GO:0009975 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0016829 GO:0016849 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048856 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0090351 GO:0090615 GO:0097159 GO:0140053 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

591

Amino Acids

65.64

Weight (kDa)

8.14

Isoelectric Point (pI)

28.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	72 - 121	1.9e-09	PPR repeat family
PPR_3	PF13812	137 - 189	6.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	139 - 171	6.8e-06	PPR repeat
PPR_2	PF13041	142 - 190	1.5e-14	PPR repeat family
PPR_1	PF12854	174 - 206	8.6e-11	PPR repeat
PPR_1	PF12854	210 - 242	1e-10	PPR repeat
PPR_2	PF13041	214 - 263	6.2e-18	PPR repeat family
PPR	PF01535	217 - 247	7.3e-06	PPR repeat
PPR_long	PF17177	231 - 329	1.3e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	237 - 296	2e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	245 - 278	1.9e-12	PPR repeat
PPR_2	PF13041	249 - 298	2.5e-18	PPR repeat family
PPR	PF01535	252 - 282	2.4e-08	PPR repeat
MRP-S27	PF10037	253 - 316	2.2e-06	Mitochondrial 28S ribosomal protein S27
PPR_1	PF12854	280 - 312	3.1e-10	PPR repeat
PPR_2	PF13041	295 - 332	2.4e-10	PPR repeat family
PPR_1	PF12854	315 - 347	5.9e-12	PPR repeat
PPR_2	PF13041	320 - 368	2.8e-15	PPR repeat family
PPR	PF01535	322 - 351	3.5e-08	PPR repeat
TPR_24	PF23276	336 - 451	8.8e-12	Fungal tetratrico peptide repeats
PPR_3	PF13812	347 - 399	9.3e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	350 - 383	7e-11	PPR repeat
PPR	PF01535	357 - 387	7.3e-09	PPR repeat
PPR_2	PF13041	358 - 403	8.9e-19	PPR repeat family
PPR_1	PF12854	385 - 416	1.1e-10	PPR repeat
PPR_2	PF13041	389 - 438	3.5e-12	PPR repeat family
PPR_2	PF13041	460 - 507	4.1e-13	PPR repeat family
PPR_3	PF13812	488 - 541	1.9e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	490 - 523	9.3e-13	PPR repeat
PPR	PF01535	498 - 526	3.2e-07	PPR repeat
PPR_2	PF13041	506 - 542	3.4e-08	PPR repeat family
PPR_2	PF13041	529 - 574	2.9e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49830 AT5G67630
fragaria_vesca	FvH4_1g17590
malus_domestica	MD02G1184700.v1.1 MD08G1213300.v1.1
prunus_persica	Prupe.1G544700_v2.0.a1
pyrus_communis	pycom02g14980 pycom15g25960
rosa_chinensis	RchiOBHm_Chr2g0107901 RchiOBHm_Chr6g0265871 RchiOBHm_Chr6g0265881 RchiOBHm_Chr6g0265891 RchiOBHm_Chr6g0265911
rosa_laevigata	RLG00000014147 RLG00000014151 RLG00000014152 RLG00000017626 RLG00000030880
rosa_multiflora	Rmu_sc0000149.1_g000017 Rmu_sc0001484.1_g000033 Rmu_sc0006952.1_g000010 Rmu_sc0006952.1_g000012 Rmu_sc0006952.1_g000034 Rmu_sc0013320.1_g000004 Rmu_sc0013320.1_g000009
rosa_roxburghii	Rroxscaffold_2G00135810 Rroxscaffold_7G00202230 Rroxscaffold_7G00202270 Rroxscaffold_7G00202280 Rroxscaffold_7G00202290
rosa_rugosa	Rorug02G0148600 Rorug02G0148600 Rorug06G0021100 Rorug06G0021100 Rorug06G0021300
rosa_samantha	Rh2AG197900 Rh2BG210800 Rh2CG202600 Rh2DG205600 Rh6BG142600 Rh6BG142700 Rh6CG139200 Rh6CG139300 Rh6DG126800 Rh6DG126900
rosa_wichuraiana	Rw0G009670 Rw0G009680 Rw2G015700 Rw6G012330 Rw6G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	753
AccI	GTMKAC	1 cut(s)	290
AciI	CCGC	2 cut(s)	7, 275
AclWI	GGATC	2 cut(s)	309, 1739
AcoI	YGGCCR	1 cut(s)	1261
AcsI	RAATTY	3 cut(s)	401, 410, 853
AcuI	CTGAAG	2 cut(s)	99, 850
AcyI	GRCGYC	1 cut(s)	750
AdeI	CACNNNGTG	1 cut(s)	920
AfaI	GTAC	2 cut(s)	1396, 1496
AhlI	ACTAGT	1 cut(s)	691
AjnI	CCWGG	1 cut(s)	873
AjuI	GAANNNNNNNTTGG	2 cut(s)	1701, 1733
AleI	CACNNNNGTG	1 cut(s)	509
Alw26I	GTCTC	4 cut(s)	486, 630, 680, 1631
AlwI	GGATC	2 cut(s)	309, 1739
AlwNI	CAGNNNCTG	1 cut(s)	678
Ama87I	CYCGRG	1 cut(s)	627
AoxI	GGCC	4 cut(s)	793, 1122, 1261, 1303
ApeKI	GCWGC	6 cut(s)	14, 17, 20, 23, 488, 590
ApoI	RAATTY	3 cut(s)	401, 410, 853
ArsI	GACNNNNNNTTYG	2 cut(s)	229, 261
AseI	ATTAAT	1 cut(s)	1712
AspS9I	GGNCC	1 cut(s)	1444
AsuHPI	GGTGA	1 cut(s)	958
AvaI	CYCGRG	1 cut(s)	627
AvaII	GGWCC	1 cut(s)	1444
BaeI	ACNNNNGTAYC	2 cut(s)	678, 711
BalI	TGGCCA	1 cut(s)	1263
BanII	GRGCYC	1 cut(s)	1055
BbsI	GAAGAC	1 cut(s)	71
BbvI	GCAGC	5 cut(s)	4, 7, 10, 500, 602
BccI	CCATC	9 cut(s)	164, 568, 607, 823, 895, 980, 1133, 1190, 1295
BceAI	ACGGC	1 cut(s)	1274
BciT130I	CCWGG	1 cut(s)	875
BciVI	GTATCC	2 cut(s)	679, 881
BclI	TGATCA	1 cut(s)	1506
BcoDI	GTCTC	4 cut(s)	486, 630, 680, 1631
BcuI	ACTAGT	1 cut(s)	691
BfaI	CTAG	3 cut(s)	642, 692, 1223
BfmI	CTRYAG	3 cut(s)	588, 970, 1689
BfuI	GTATCC	2 cut(s)	679, 881
BisI	GCNGC	6 cut(s)	15, 18, 21, 24, 489, 591
BlsI	GCNGC	6 cut(s)	16, 19, 22, 25, 490, 592
BmcAI	AGTACT	1 cut(s)	1396
Bme1390I	CCNGG	1 cut(s)	875
Bme18I	GGWCC	1 cut(s)	1444
BmeT110I	CYCGRG	1 cut(s)	627
BmgT120I	GGNCC	1 cut(s)	1444
BmiI	GGNNCC	2 cut(s)	1054, 1164
BmrFI	CCNGG	1 cut(s)	875
BmsI	GCATC	6 cut(s)	183, 313, 691, 1216, 1474, 1684
BpiI	GAAGAC	1 cut(s)	71
BplI	GAGNNNNNCTC	2 cut(s)	1608, 1640
Bpu10I	CCTNAGC	2 cut(s)	605, 1556
BpuEI	CTTGAG	1 cut(s)	93
BsaHI	GRCGYC	1 cut(s)	750
BsaJI	CCNNGG	1 cut(s)	1615
Bse1I	ACTGG	3 cut(s)	796, 1164, 1302
Bse3DI	GCAATG	1 cut(s)	1341
BseBI	CCWGG	1 cut(s)	875
BseDI	CCNNGG	1 cut(s)	1615
BseGI	GGATG	6 cut(s)	175, 906, 991, 1119, 1201, 1306
BseMI	GCAATG	1 cut(s)	1341
BseMII	CTCAG	2 cut(s)	497, 732
BseNI	ACTGG	3 cut(s)	796, 1164, 1302
BseRI	GAGGAG	4 cut(s)	72, 75, 78, 1017
BseXI	GCAGC	5 cut(s)	4, 7, 10, 500, 602
BshFI	GGCC	4 cut(s)	795, 1124, 1263, 1305
BsiHKCI	CYCGRG	1 cut(s)	627
BslFI	GGGAC	3 cut(s)	1170, 1527, 1668
BsmAI	GTCTC	4 cut(s)	486, 630, 680, 1631
BsmFI	GGGAC	3 cut(s)	1170, 1527, 1668
BsmI	GAATGC	1 cut(s)	1364
BsnI	GGCC	4 cut(s)	795, 1124, 1263, 1305
BsoBI	CYCGRG	1 cut(s)	627
Bsp1286I	GDGCHC	1 cut(s)	1055
Bsp143I	GATC	3 cut(s)	301, 1506, 1744
BspACI	CCGC	2 cut(s)	7, 275
BspANI	GGCC	4 cut(s)	795, 1124, 1263, 1305
BspCNI	CTCAG	2 cut(s)	496, 731
BspLI	GGNNCC	2 cut(s)	1054, 1164
BspMAI	CTGCAG	2 cut(s)	592, 1693
BspPI	GGATC	2 cut(s)	309, 1739
BspQI	GCTCTTC	1 cut(s)	719
BsrDI	GCAATG	1 cut(s)	1341
BsrI	ACTGG	3 cut(s)	796, 1164, 1302
BssECI	CCNNGG	1 cut(s)	1615
BssMI	GATC	3 cut(s)	301, 1506, 1744
BssNAI	GTATAC	1 cut(s)	291
BssNI	GRCGYC	1 cut(s)	750
Bst1107I	GTATAC	1 cut(s)	291
Bst2UI	CCWGG	1 cut(s)	875
Bst6I	CTCTTC	2 cut(s)	216, 719
BstACI	GRCGYC	1 cut(s)	750
BstC8I	GCNNGC	1 cut(s)	1254
BstDEI	CTNAG	5 cut(s)	308, 483, 605, 718, 1556
BstF5I	GGATG	6 cut(s)	175, 906, 991, 1119, 1201, 1306
BstKTI	GATC	3 cut(s)	304, 1509, 1747
BstMAI	GTCTC	4 cut(s)	486, 630, 680, 1631
BstMBI	GATC	3 cut(s)	301, 1506, 1744
BstMWI	GCNNNNNNNGC	4 cut(s)	20, 23, 202, 792
BstNI	CCWGG	1 cut(s)	875
BstSCI	CCNGG	1 cut(s)	873
BstSFI	CTRYAG	3 cut(s)	588, 970, 1689
BstV1I	GCAGC	5 cut(s)	4, 7, 10, 500, 602
BstV2I	GAAGAC	1 cut(s)	71
BstX2I	RGATCY	1 cut(s)	1744
BstYI	RGATCY	1 cut(s)	1744
BstZ17I	GTATAC	1 cut(s)	291
BsuI	GTATCC	2 cut(s)	679, 881
BsuRI	GGCC	4 cut(s)	795, 1124, 1263, 1305
BtgZI	GCGATG	1 cut(s)	235
BtsCI	GGATG	6 cut(s)	175, 906, 991, 1119, 1201, 1306
BtsI	GCAGTG	1 cut(s)	1656
BtsIMutI	CAGTG	3 cut(s)	123, 803, 1656
Cac8I	GCNNGC	1 cut(s)	1254
CaiI	CAGNNNCTG	1 cut(s)	678
Cfr13I	GGNCC	1 cut(s)	1444
CseI	GACGC	1 cut(s)	194
Csp6I	GTAC	2 cut(s)	1395, 1495
CviAII	CATG	6 cut(s)	241, 571, 776, 1363, 1698, 1761
CviQI	GTAC	2 cut(s)	1395, 1495
DdeI	CTNAG	5 cut(s)	308, 483, 605, 718, 1556
DpnI	GATC	3 cut(s)	303, 1508, 1746
DpnII	GATC	3 cut(s)	301, 1506, 1744
DraI	TTTAAA	1 cut(s)	1312
DraIII	CACNNNGTG	1 cut(s)	920
EaeI	YGGCCR	1 cut(s)	1261
Eam1104I	CTCTTC	2 cut(s)	216, 719
EarI	CTCTTC	2 cut(s)	216, 719
Eco24I	GRGCYC	1 cut(s)	1055
Eco47I	GGWCC	1 cut(s)	1444
Eco57I	CTGAAG	2 cut(s)	99, 850
Eco88I	CYCGRG	1 cut(s)	627
EcoRII	CCWGG	1 cut(s)	873
EcoT22I	ATGCAT	2 cut(s)	1364, 1699
EcoT38I	GRGCYC	1 cut(s)	1055
FaeI	CATG	6 cut(s)	244, 574, 779, 1366, 1701, 1764
FalI	AAGNNNNNCTT	2 cut(s)	1433, 1465
FaqI	GGGAC	3 cut(s)	1170, 1527, 1668
FatI	CATG	6 cut(s)	240, 570, 775, 1362, 1697, 1760
FbaI	TGATCA	1 cut(s)	1506
FblI	GTMKAC	1 cut(s)	290
Fnu4HI	GCNGC	6 cut(s)	15, 18, 21, 24, 489, 591
FokI	GGATG	6 cut(s)	182, 913, 998, 1126, 1208, 1313
FriOI	GRGCYC	1 cut(s)	1055
Fsp4HI	GCNGC	6 cut(s)	15, 18, 21, 24, 489, 591
FspBI	CTAG	3 cut(s)	642, 692, 1223
GluI	GCNGC	6 cut(s)	15, 18, 21, 24, 489, 591
HaeIII	GGCC	4 cut(s)	795, 1124, 1263, 1305
HgaI	GACGC	1 cut(s)	194
Hin1I	GRCGYC	1 cut(s)	750
Hin1II	CATG	6 cut(s)	244, 574, 779, 1366, 1701, 1764
HindIII	AAGCTT	2 cut(s)	111, 1254
HinfI	GANTC	4 cut(s)	378, 772, 937, 1433
HphI	GGTGA	1 cut(s)	958
Hpy166II	GTNNAC	4 cut(s)	291, 977, 1497, 1663
Hpy188I	TCNGA	4 cut(s)	548, 721, 1150, 1616
Hpy188III	TCNNGA	9 cut(s)	320, 627, 629, 698, 850, 1139, 1271, 1586, 1664
Hpy8I	GTNNAC	4 cut(s)	291, 977, 1497, 1663
HpyAV	CCTTC	5 cut(s)	110, 464, 874, 1400, 1517
HpyCH4IV	ACGT	2 cut(s)	750, 1493
HpyF10VI	GCNNNNNNNGC	4 cut(s)	20, 23, 202, 792
HpyF3I	CTNAG	5 cut(s)	308, 483, 605, 718, 1556
HpySE526I	ACGT	2 cut(s)	750, 1493
Hsp92I	GRCGYC	1 cut(s)	750
Hsp92II	CATG	6 cut(s)	244, 574, 779, 1366, 1701, 1764
Ksp22I	TGATCA	1 cut(s)	1506
Kzo9I	GATC	3 cut(s)	301, 1506, 1744
LguI	GCTCTTC	1 cut(s)	719
LmnI	GCTCC	3 cut(s)	514, 1058, 1588
Lsp1109I	GCAGC	5 cut(s)	4, 7, 10, 500, 602
LweI	GCATC	6 cut(s)	183, 313, 691, 1216, 1474, 1684
MaeI	CTAG	3 cut(s)	642, 692, 1223
MaeII	ACGT	2 cut(s)	750, 1493
MaeIII	GTNAC	5 cut(s)	245, 538, 859, 964, 1174
MalI	GATC	3 cut(s)	303, 1508, 1746
MboI	GATC	3 cut(s)	301, 1506, 1744
MboII	GAAGA	9 cut(s)	21, 24, 71, 203, 397, 622, 706, 838, 1227
MfeI	CAATTG	2 cut(s)	349, 599
MflI	RGATCY	1 cut(s)	1744
MhlI	GDGCHC	1 cut(s)	1055
MlsI	TGGCCA	1 cut(s)	1263
MluNI	TGGCCA	1 cut(s)	1263
MmeI	TCCRAC	1 cut(s)	1335
Mox20I	TGGCCA	1 cut(s)	1263
Mph1103I	ATGCAT	2 cut(s)	1364, 1699
MscI	TGGCCA	1 cut(s)	1263
MseI	TTAA	5 cut(s)	708, 1062, 1311, 1532, 1712
MslI	CAYNNNNRTG	2 cut(s)	509, 1502
Msp20I	TGGCCA	1 cut(s)	1263
MspA1I	CMGCKG	1 cut(s)	593
MspR9I	CCNGG	1 cut(s)	875
MunI	CAATTG	2 cut(s)	349, 599
Mva1269I	GAATGC	1 cut(s)	1364
MvaI	CCWGG	1 cut(s)	875
MwoI	GCNNNNNNNGC	4 cut(s)	20, 23, 202, 792
NdeII	GATC	3 cut(s)	301, 1506, 1744
NlaIII	CATG	6 cut(s)	244, 574, 779, 1366, 1701, 1764
NlaIV	GGNNCC	2 cut(s)	1054, 1164
NmuCI	GTSAC	3 cut(s)	245, 964, 1174
NsiI	ATGCAT	2 cut(s)	1364, 1699
OliI	CACNNNNGTG	1 cut(s)	509
PaeR7I	CTCGAG	1 cut(s)	627
PciSI	GCTCTTC	1 cut(s)	719
PctI	GAATGC	1 cut(s)	1364
PfeI	GAWTC	4 cut(s)	378, 772, 937, 1433
PkrI	GCNGC	6 cut(s)	16, 19, 22, 25, 490, 592
PshBI	ATTAAT	1 cut(s)	1712
Psp6I	CCWGG	1 cut(s)	873
PspGI	CCWGG	1 cut(s)	873
PspN4I	GGNNCC	2 cut(s)	1054, 1164
PspPI	GGNCC	1 cut(s)	1444
PstI	CTGCAG	2 cut(s)	592, 1693
PstNI	CAGNNNCTG	1 cut(s)	678
PsuI	RGATCY	1 cut(s)	1744
PvuII	CAGCTG	1 cut(s)	593
RsaI	GTAC	2 cut(s)	1396, 1496
RsaNI	GTAC	2 cut(s)	1395, 1495
RseI	CAYNNNNRTG	2 cut(s)	509, 1502
SapI	GCTCTTC	1 cut(s)	719
SaqAI	TTAA	5 cut(s)	708, 1062, 1311, 1532, 1712
SatI	GCNGC	6 cut(s)	15, 18, 21, 24, 489, 591
Sau3AI	GATC	3 cut(s)	301, 1506, 1744
Sau96I	GGNCC	1 cut(s)	1444
ScaI	AGTACT	1 cut(s)	1396
ScrFI	CCNGG	1 cut(s)	875
SduI	GDGCHC	1 cut(s)	1055
SfaNI	GCATC	6 cut(s)	183, 313, 691, 1216, 1474, 1684
SfcI	CTRYAG	3 cut(s)	588, 970, 1689
Sfr274I	CTCGAG	1 cut(s)	627
SinI	GGWCC	1 cut(s)	1444
SlaI	CTCGAG	1 cut(s)	627
SmiMI	CAYNNNNRTG	2 cut(s)	509, 1502
SmlI	CTYRAG	2 cut(s)	108, 627
SmoI	CTYRAG	2 cut(s)	108, 627
SpeI	ACTAGT	1 cut(s)	691
SsiI	CCGC	2 cut(s)	7, 275
SspMI	CTAG	3 cut(s)	642, 692, 1223
StyD4I	CCNGG	1 cut(s)	873
TaiI	ACGT	2 cut(s)	753, 1496
TaqI	TCGA	2 cut(s)	628, 879
TatI	WGTACW	1 cut(s)	1394
TfiI	GAWTC	4 cut(s)	378, 772, 937, 1433
Tru1I	TTAA	5 cut(s)	708, 1062, 1311, 1532, 1712
Tru9I	TTAA	5 cut(s)	708, 1062, 1311, 1532, 1712
TscAI	CASTG	3 cut(s)	123, 803, 1656
TseFI	GTSAC	3 cut(s)	245, 964, 1174
TseI	GCWGC	6 cut(s)	14, 17, 20, 23, 488, 590
Tsp45I	GTSAC	3 cut(s)	245, 964, 1174
TspDTI	ATGAA	7 cut(s)	71, 92, 454, 764, 1055, 1130, 1379
TspGWI	ACGGA	3 cut(s)	215, 1045, 1688
TspRI	CASTG	3 cut(s)	123, 803, 1656
VpaK11BI	GGWCC	1 cut(s)	1444
VspI	ATTAAT	1 cut(s)	1712
XapI	RAATTY	3 cut(s)	401, 410, 853
XhoI	CTCGAG	1 cut(s)	627
XmiI	GTMKAC	1 cut(s)	290
XspI	CTAG	3 cut(s)	642, 692, 1223
ZraI	GACGTC	1 cut(s)	751
ZrmI	AGTACT	1 cut(s)	1396
Zsp2I	ATGCAT	2 cut(s)	1364, 1699

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.