Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0001576

Physical Location & Seq

Genomic Coordinates Forward (+)

11702185 .. 11705182

Gene Structure 2998 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g14980.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGGCGGAGCTCAAGCTCTCAGAGAGTCGAGACCTGACCCGAATAGAGCGCATAGGCGCACACTCCCACATCCGTGGTCTCGGCCTCGACTCTGCTTTAGAAGCACGCGACGTCTCCGAAGGCATGGTGGGCCAGACTTCCGCCCGAAAGGCCGCTGGCGTCATTCTCCAGATGATCAATCCGGAAGGAAAAATCGCGGGTCGGGCCGTTCTTCTGGCGGGTCAGCCTGGAACCGGCAAGACCGCCATCGCCATGGGCATGGCGAAGTCGCTCGGCCTCGAAACCCCGTTCGCGATGTTGGCCGGAAGCGACCTCTTTTCTCTGGAGATGTCGAAAACCGAAGCCCTAATGCAAGCTTTTAGGAAAGCTATTGGGGTTCGAATCAAGGAAGAGACTGAGATTATCGAAGGCGAGGTCGTGGAGGTTCAAATTGACCGGCCTGCGGTGGCCGGAGCGGCTTCGAAGACGGGGAAATTGACGTTGAAGACGACGGAGATGGAGACCGTGTATGACTTGGGGGCGAAGATGATTGAGGCTTTGGGGAAGGAGAAGGTGCAAAGTGGGGATGTGATTGCCATTGATAAAGCTTCTGGGAAAATTACTAAGCTTGGTAGGTCGATTTCAAGGTCAAGGGACTACGATGCCATGGGACCGCAGGTTAAGTTTATGCAGTGCCCGGACGGGGAGTTGCAGAAGCGCAAGGAGGTCGTTCATTGCGTCACACTTCATGAGATTGATGTCATCAACAGCAGAACACAGGGATTTCTGGCTCTCTTCACTGGTGATACTGGTGAAATCCGTTCAGAAGTTAGAGAACAAATCGACACAAAGGTAGCAGAGTGGAGAGAGGAAGGGAAGGCAGAGATTGTGCCAGGCGTACTCTTTATCGATGAGGTTCACATGCTTGACATTGAGTGCTTTTCATTTTTGAATCGTGCATTGGAGAATGAGATGGCTCCCATATTAGTTGTTGCTACCAACAGAGGAATCACTACAATCAGAGGCACAAATTATAAATCCCCCCATGGAATTCCTATTGATCTCCTTGATCGACTGCTAATTATTACCACCCAGCCTTACACAGAGGATGAAATTAGTAAGATCCTGAACATCAGATGCCAAGAAGAAGAAGTCGAGATGTCTGAAGAAGCAAAGCATCTGTTGACGAAGATTGGTGTTGATGCATCCTTGAGATATGCTATCCATCTCATAACAGCATCTTCGTTGGCATGCCAAAAGCGGAAGGGAAATATTGTGGAGATGGAGGATATTAACCGAGTTTACCATCTGTTTCTGGATGTGAAGAGATCAACACAATACTTGATGGAGTATCAGAGTCAGTACATGTTCAGTGAGGAAGGCGACGACGATGATACCAATGCCATGCAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0000812 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0031974 GO:0031981 GO:0032991 GO:0034708 GO:0035097 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044665 GO:0070013 GO:0070603 GO:0071339 GO:0097346 GO:1902494 GO:1904949 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TIP49

Protein Analysis

465

Amino Acids

51.24

Weight (kDa)

5.22

Isoelectric Point (pI)

42.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49830 AT5G67630
fragaria_vesca	FvH4_1g17590
malus_domestica	MD02G1184700.v1.1 MD08G1213300.v1.1
prunus_persica	Prupe.1G544700_v2.0.a1
pyrus_communis	pycom02g14980 pycom15g25960
rosa_chinensis	RchiOBHm_Chr2g0107901 RchiOBHm_Chr6g0265871 RchiOBHm_Chr6g0265881 RchiOBHm_Chr6g0265891 RchiOBHm_Chr6g0265911
rosa_laevigata	RLG00000014147 RLG00000014151 RLG00000014152 RLG00000017626 RLG00000030880
rosa_multiflora	Rmu_sc0000149.1_g000017 Rmu_sc0001484.1_g000033 Rmu_sc0006952.1_g000010 Rmu_sc0006952.1_g000012 Rmu_sc0006952.1_g000034 Rmu_sc0013320.1_g000004 Rmu_sc0013320.1_g000009
rosa_roxburghii	Rroxscaffold_2G00135810 Rroxscaffold_7G00202230 Rroxscaffold_7G00202270 Rroxscaffold_7G00202280 Rroxscaffold_7G00202290
rosa_rugosa	Rorug02G0148600 Rorug02G0148600 Rorug06G0021100 Rorug06G0021100 Rorug06G0021300
rosa_samantha	Rh2AG197900 Rh2BG210800 Rh2CG202600 Rh2DG205600 Rh6BG142600 Rh6BG142700 Rh6CG139200 Rh6CG139300 Rh6DG126800 Rh6DG126900
rosa_wichuraiana	Rw0G009670 Rw0G009680 Rw2G015700 Rw6G012330 Rw6G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1014
AatII	GACGTC	1 cut(s)	114
Acc36I	ACCTGC	1 cut(s)	646
AccBSI	CCGCTC	1 cut(s)	455
AccII	CGCG	3 cut(s)	108, 197, 293
AccIII	TCCGGA	1 cut(s)	181
AclWI	GGATC	1 cut(s)	1096
AcoI	YGGCCR	2 cut(s)	300, 447
AcsI	RAATTY	1 cut(s)	1029
AcuI	CTGAAG	1 cut(s)	1164
AcyI	GRCGYC	2 cut(s)	111, 159
AfaI	GTAC	2 cut(s)	879, 1343
AfiI	CCNNNNNNNGG	3 cut(s)	233, 442, 682
AflIII	ACRYGT	1 cut(s)	1344
AgsI	TTSAA	4 cut(s)	428, 484, 624, 931
AjnI	CCWGG	2 cut(s)	226, 871
AjuI	GAANNNNNNNTTGG	2 cut(s)	923, 955
AleI	CACNNNNGTG	1 cut(s)	72
AluBI	AGCT	6 cut(s)	10, 16, 356, 368, 587, 607
AluI	AGCT	6 cut(s)	10, 16, 356, 368, 587, 607
Alw21I	GWGCWC	1 cut(s)	12
Alw26I	GTCTC	5 cut(s)	24, 83, 118, 386, 494
AlwI	GGATC	1 cut(s)	1096
Aor13HI	TCCGGA	1 cut(s)	181
AoxI	GGCC	8 cut(s)	82, 130, 150, 204, 274, 300, 437, 447
ApoI	RAATTY	1 cut(s)	1029
ArsI	GACNNNNNNTTYG	2 cut(s)	399, 431
AspLEI	GCGC	3 cut(s)	51, 59, 699
AspS9I	GGNCC	3 cut(s)	130, 204, 650
AsuC2I	CCSGG	1 cut(s)	677
AsuHPI	GGTGA	2 cut(s)	794, 803
AsuII	TTCGAA	2 cut(s)	379, 461
AvaII	GGWCC	1 cut(s)	650
BaeGI	GKGCMC	1 cut(s)	677
BanII	GRGCYC	1 cut(s)	12
BbsI	GAAGAC	2 cut(s)	470, 491
Bbv12I	GWGCWC	1 cut(s)	12
BccI	CCATC	7 cut(s)	254, 490, 946, 1212, 1255, 1293, 1318
BceAI	ACGGC	1 cut(s)	191
BcgI	CGANNNNNNTGC	2 cut(s)	688, 722
BciT130I	CCWGG	2 cut(s)	228, 873
BclI	TGATCA	1 cut(s)	174
BcnI	CCSGG	1 cut(s)	677
BcoDI	GTCTC	5 cut(s)	24, 83, 118, 386, 494
BfuAI	ACCTGC	1 cut(s)	646
BglI	GCCNNNNNGGC	2 cut(s)	149, 455
BisI	GCNGC	2 cut(s)	153, 456
BlsI	GCNGC	2 cut(s)	154, 457
Bme1390I	CCNGG	3 cut(s)	228, 677, 873
Bme18I	GGWCC	1 cut(s)	650
BmgT120I	GGNCC	3 cut(s)	130, 204, 650
BmiI	GGNNCC	3 cut(s)	232, 651, 957
BmrFI	CCNGG	3 cut(s)	228, 677, 873
BmsI	GCATC	6 cut(s)	631, 1106, 1165, 1171, 1193, 1226
BpiI	GAAGAC	2 cut(s)	470, 491
BpmI	CTGGAG	2 cut(s)	152, 344
Bpu14I	TTCGAA	2 cut(s)	379, 461
BpuEI	CTTGAG	1 cut(s)	1210
BpuMI	CCSGG	1 cut(s)	677
Bsa29I	ATCGAT	1 cut(s)	888
BsaHI	GRCGYC	2 cut(s)	111, 159
BsaI	GGTCTC	3 cut(s)	24, 83, 494
BsaJI	CCNNGG	4 cut(s)	73, 252, 645, 1024
BsaWI	WCCGGW	1 cut(s)	181
BsaXI	ACNNNNNCTCC	2 cut(s)	491, 521
Bsc4I	CCNNNNNNNGG	3 cut(s)	233, 442, 682
Bse118I	RCCGGY	2 cut(s)	233, 435
Bse1I	ACTGG	2 cut(s)	784, 793
Bse3DI	GCAATG	1 cut(s)	712
BseAI	TCCGGA	1 cut(s)	181
BseBI	CCWGG	2 cut(s)	228, 873
BseCI	ATCGAT	1 cut(s)	888
BseDI	CCNNGG	4 cut(s)	73, 252, 645, 1024
BseGI	GGATG	5 cut(s)	69, 571, 1093, 1184, 1303
BseLI	CCNNNNNNNGG	3 cut(s)	233, 442, 682
BseMI	GCAATG	1 cut(s)	712
BseMII	CTCAG	2 cut(s)	33, 387
BseNI	ACTGG	2 cut(s)	784, 793
BseSI	GKGCMC	1 cut(s)	677
BseYI	CCCAGC	1 cut(s)	1071
Bsh1236I	CGCG	3 cut(s)	108, 197, 293
BshFI	GGCC	8 cut(s)	84, 132, 152, 206, 276, 302, 439, 449
BshVI	ATCGAT	1 cut(s)	888
BsiHKAI	GWGCWC	1 cut(s)	12
BsiSI	CCGG	6 cut(s)	182, 234, 303, 436, 450, 677
BslFI	GGGAC	2 cut(s)	647, 663
BslI	CCNNNNNNNGG	3 cut(s)	233, 442, 682
BsmAI	GTCTC	5 cut(s)	24, 83, 118, 386, 494
BsmBI	CGTCTC	1 cut(s)	118
BsmFI	GGGAC	2 cut(s)	647, 663
BsnI	GGCC	8 cut(s)	84, 132, 152, 206, 276, 302, 439, 449
Bso31I	GGTCTC	3 cut(s)	24, 83, 494
Bsp119I	TTCGAA	2 cut(s)	379, 461
Bsp1286I	GDGCHC	2 cut(s)	12, 677
Bsp13I	TCCGGA	1 cut(s)	181
Bsp143I	GATC	5 cut(s)	174, 1039, 1048, 1101, 1307
Bsp19I	CCATGG	3 cut(s)	252, 645, 1024
Bsp68I	TCGCGA	1 cut(s)	293
BspANI	GGCC	8 cut(s)	84, 132, 152, 206, 276, 302, 439, 449
BspCNI	CTCAG	2 cut(s)	32, 388
BspDI	ATCGAT	1 cut(s)	888
BspEI	TCCGGA	1 cut(s)	181
BspFNI	CGCG	3 cut(s)	108, 197, 293
BspHI	TCATGA	1 cut(s)	727
BspLI	GGNNCC	3 cut(s)	232, 651, 957
BspMI	ACCTGC	1 cut(s)	646
BspPI	GGATC	1 cut(s)	1096
BspT104I	TTCGAA	2 cut(s)	379, 461
BspTNI	GGTCTC	3 cut(s)	24, 83, 494
BsrBI	CCGCTC	1 cut(s)	455
BsrDI	GCAATG	1 cut(s)	712
BsrFI	RCCGGY	2 cut(s)	233, 435
BsrI	ACTGG	2 cut(s)	784, 793
BssAI	RCCGGY	2 cut(s)	233, 435
BssECI	CCNNGG	4 cut(s)	73, 252, 645, 1024
BssMI	GATC	5 cut(s)	174, 1039, 1048, 1101, 1307
BssNI	GRCGYC	2 cut(s)	111, 159
BssT1I	CCWWGG	3 cut(s)	252, 645, 1024
Bst2UI	CCWGG	2 cut(s)	228, 873
Bst4CI	ACNGT	1 cut(s)	505
Bst6I	CTCTTC	3 cut(s)	384, 779, 1298
BstACI	GRCGYC	2 cut(s)	111, 159
BstBI	TTCGAA	2 cut(s)	379, 461
BstC8I	GCNNGC	5 cut(s)	106, 157, 354, 441, 1231
BstDEI	CTNAG	3 cut(s)	19, 396, 603
BstDSI	CCRYGG	4 cut(s)	73, 252, 645, 1024
BstF5I	GGATG	5 cut(s)	69, 571, 1093, 1184, 1303
BstFNI	CGCG	3 cut(s)	108, 197, 293
BstHHI	GCGC	3 cut(s)	51, 59, 699
BstKTI	GATC	5 cut(s)	177, 1042, 1051, 1104, 1310
BstMAI	GTCTC	5 cut(s)	24, 83, 118, 386, 494
BstMBI	GATC	5 cut(s)	174, 1039, 1048, 1101, 1307
BstMWI	GCNNNNNNNGC	6 cut(s)	101, 129, 149, 203, 299, 455
BstNI	CCWGG	2 cut(s)	228, 873
BstNSI	RCATGY	3 cut(s)	904, 1233, 1348
BstSCI	CCNGG	3 cut(s)	226, 675, 871
BstSLI	GKGCMC	1 cut(s)	677
BstUI	CGCG	3 cut(s)	108, 197, 293
BstV2I	GAAGAC	2 cut(s)	470, 491
BstX2I	RGATCY	1 cut(s)	1101
BstXI	CCANNNNNNTGG	3 cut(s)	74, 253, 259
BstYI	RGATCY	1 cut(s)	1101
Bsu15I	ATCGAT	1 cut(s)	888
BsuRI	GGCC	8 cut(s)	84, 132, 152, 206, 276, 302, 439, 449
BsuTUI	ATCGAT	1 cut(s)	888
BtgI	CCRYGG	4 cut(s)	73, 252, 645, 1024
BtgZI	GCGATG	2 cut(s)	232, 308
BtsCI	GGATG	5 cut(s)	69, 571, 1093, 1184, 1303
BtsI	GCAGTG	1 cut(s)	677
BtsIMutI	CAGTG	3 cut(s)	677, 777, 1357
BtuMI	TCGCGA	1 cut(s)	293
BveI	ACCTGC	1 cut(s)	646
Cac8I	GCNNGC	5 cut(s)	106, 157, 354, 441, 1231
CciI	TCATGA	1 cut(s)	727
CfoI	GCGC	3 cut(s)	51, 59, 699
Cfr10I	RCCGGY	2 cut(s)	233, 435
Cfr13I	GGNCC	3 cut(s)	130, 204, 650
ClaI	ATCGAT	1 cut(s)	888
CseI	GACGC	2 cut(s)	148, 706
Csp6I	GTAC	2 cut(s)	878, 1342
CviQI	GTAC	2 cut(s)	878, 1342
DdeI	CTNAG	3 cut(s)	19, 396, 603
DpnI	GATC	5 cut(s)	176, 1041, 1050, 1103, 1309
DpnII	GATC	5 cut(s)	174, 1039, 1048, 1101, 1307
EaeI	YGGCCR	2 cut(s)	300, 447
Eam1104I	CTCTTC	3 cut(s)	384, 779, 1298
EarI	CTCTTC	3 cut(s)	384, 779, 1298
EciI	GGCGGA	2 cut(s)	20, 130
Ecl136II	GAGCTC	1 cut(s)	10
Eco130I	CCWWGG	3 cut(s)	252, 645, 1024
Eco24I	GRGCYC	1 cut(s)	12
Eco31I	GGTCTC	3 cut(s)	24, 83, 494
Eco47I	GGWCC	1 cut(s)	650
Eco53kI	GAGCTC	1 cut(s)	10
Eco57I	CTGAAG	1 cut(s)	1164
EcoICRI	GAGCTC	1 cut(s)	10
EcoRI	GAATTC	1 cut(s)	1029
EcoRII	CCWGG	2 cut(s)	226, 871
EcoT14I	CCWWGG	3 cut(s)	252, 645, 1024
EcoT22I	ATGCAT	1 cut(s)	1186
EcoT38I	GRGCYC	1 cut(s)	12
ErhI	CCWWGG	3 cut(s)	252, 645, 1024
Esp3I	CGTCTC	1 cut(s)	118
FaqI	GGGAC	2 cut(s)	647, 663
FauI	CCCGC	2 cut(s)	190, 211
FbaI	TGATCA	1 cut(s)	174
Fnu4HI	GCNGC	2 cut(s)	153, 456
FokI	GGATG	5 cut(s)	56, 578, 1100, 1171, 1310
FriOI	GRGCYC	1 cut(s)	12
Fsp4HI	GCNGC	2 cut(s)	153, 456
GlaI	GCGC	3 cut(s)	50, 58, 698
GluI	GCNGC	2 cut(s)	153, 456
GsaI	CCCAGC	1 cut(s)	1075
GsuI	CTGGAG	2 cut(s)	152, 344
HaeIII	GGCC	8 cut(s)	84, 132, 152, 206, 276, 302, 439, 449
HapII	CCGG	6 cut(s)	182, 234, 303, 436, 450, 677
HgaI	GACGC	2 cut(s)	148, 706
HhaI	GCGC	3 cut(s)	51, 59, 699
Hin1I	GRCGYC	2 cut(s)	111, 159
Hin6I	GCGC	3 cut(s)	49, 57, 697
HinP1I	GCGC	3 cut(s)	49, 57, 697
HincII	GTYRAC	1 cut(s)	1164
HindII	GTYRAC	1 cut(s)	1164
HindIII	AAGCTT	3 cut(s)	354, 585, 605
HinfI	GANTC	6 cut(s)	25, 89, 381, 931, 987, 1336
HpaII	CCGG	6 cut(s)	182, 234, 303, 436, 450, 677
HphI	GGTGA	2 cut(s)	794, 803
Hpy166II	GTNNAC	3 cut(s)	898, 1164, 1282
Hpy188I	TCNGA	7 cut(s)	22, 118, 805, 1001, 1115, 1144, 1335
Hpy8I	GTNNAC	3 cut(s)	898, 1164, 1282
Hpy99I	CGWCG	4 cut(s)	113, 493, 1367, 1370
HpyAV	CCTTC	9 cut(s)	113, 179, 401, 538, 544, 845, 850, 1237, 1352
HpyCH4III	ACNGT	1 cut(s)	505
HpyCH4IV	ACGT	2 cut(s)	111, 479
HpyCH4V	TGCA	7 cut(s)	352, 556, 670, 691, 938, 1184, 1387
HpyF10VI	GCNNNNNNNGC	6 cut(s)	101, 129, 149, 203, 299, 455
HpyF3I	CTNAG	3 cut(s)	19, 396, 603
HpySE526I	ACGT	2 cut(s)	111, 479
Hsp92I	GRCGYC	2 cut(s)	111, 159
HspAI	GCGC	3 cut(s)	49, 57, 697
Kpn2I	TCCGGA	1 cut(s)	181
Ksp22I	TGATCA	1 cut(s)	174
Kzo9I	GATC	5 cut(s)	174, 1039, 1048, 1101, 1307
LmnI	GCTCC	3 cut(s)	7, 452, 961
LweI	GCATC	6 cut(s)	631, 1106, 1165, 1171, 1193, 1226
MaeII	ACGT	2 cut(s)	111, 479
MaeIII	GTNAC	1 cut(s)	718
MalI	GATC	5 cut(s)	176, 1041, 1050, 1103, 1309
MbiI	CCGCTC	1 cut(s)	455
MboI	GATC	5 cut(s)	174, 1039, 1048, 1101, 1307
MflI	RGATCY	1 cut(s)	1101
MhlI	GDGCHC	2 cut(s)	12, 677
MluCI	AATT	7 cut(s)	429, 473, 597, 1009, 1029, 1059, 1092
MlyI	GAGTC	3 cut(s)	34, 83, 1345
Mph1103I	ATGCAT	1 cut(s)	1186
MroI	TCCGGA	1 cut(s)	181
MseI	TTAA	2 cut(s)	660, 1272
MslI	CAYNNNNRTG	3 cut(s)	72, 251, 257
MspA1I	CMGCKG	1 cut(s)	155
MspI	CCGG	6 cut(s)	182, 234, 303, 436, 450, 677
MspR9I	CCNGG	3 cut(s)	228, 677, 873
MvaI	CCWGG	2 cut(s)	228, 873
MvnI	CGCG	3 cut(s)	108, 197, 293
MwoI	GCNNNNNNNGC	6 cut(s)	101, 129, 149, 203, 299, 455
NciI	CCSGG	1 cut(s)	677
NcoI	CCATGG	3 cut(s)	252, 645, 1024
NdeII	GATC	5 cut(s)	174, 1039, 1048, 1101, 1307
NlaIV	GGNNCC	3 cut(s)	232, 651, 957
NmeAIII	GCCGAG	2 cut(s)	60, 252
NmuCI	GTSAC	1 cut(s)	718
NruI	TCGCGA	1 cut(s)	293
NsiI	ATGCAT	1 cut(s)	1186
NspI	RCATGY	3 cut(s)	904, 1233, 1348
NspV	TTCGAA	2 cut(s)	379, 461
OliI	CACNNNNGTG	1 cut(s)	72
PaeI	GCATGC	1 cut(s)	1233
PagI	TCATGA	1 cut(s)	727
PciI	ACATGT	1 cut(s)	1344
PcsI	WCGNNNNNNNCGW	2 cut(s)	485, 714
PfeI	GAWTC	3 cut(s)	381, 931, 987
PkrI	GCNGC	2 cut(s)	154, 457
PleI	GAGTC	3 cut(s)	33, 83, 1344
PpsI	GAGTC	3 cut(s)	33, 83, 1344
PscI	ACATGT	1 cut(s)	1344
PsiI	TTATAA	1 cut(s)	1014
Psp124BI	GAGCTC	1 cut(s)	12
Psp6I	CCWGG	2 cut(s)	226, 871
PspFI	CCCAGC	1 cut(s)	1071
PspGI	CCWGG	2 cut(s)	226, 871
PspN4I	GGNNCC	3 cut(s)	232, 651, 957
PspPI	GGNCC	3 cut(s)	130, 204, 650
PsuI	RGATCY	1 cut(s)	1101
RruI	TCGCGA	1 cut(s)	293
RsaI	GTAC	2 cut(s)	879, 1343
RsaNI	GTAC	2 cut(s)	878, 1342
RseI	CAYNNNNRTG	3 cut(s)	72, 251, 257
SacI	GAGCTC	1 cut(s)	12
SaqAI	TTAA	2 cut(s)	660, 1272
SatI	GCNGC	2 cut(s)	153, 456
Sau3AI	GATC	5 cut(s)	174, 1039, 1048, 1101, 1307
Sau96I	GGNCC	3 cut(s)	130, 204, 650
SchI	GAGTC	3 cut(s)	34, 83, 1345
ScrFI	CCNGG	3 cut(s)	228, 677, 873
SduI	GDGCHC	2 cut(s)	12, 677
SfaNI	GCATC	6 cut(s)	631, 1106, 1165, 1171, 1193, 1226
SfuI	TTCGAA	2 cut(s)	379, 461
SinI	GGWCC	1 cut(s)	650
SmiMI	CAYNNNNRTG	3 cut(s)	72, 251, 257
SmlI	CTYRAG	2 cut(s)	11, 1189
SmoI	CTYRAG	2 cut(s)	11, 1189
SphI	GCATGC	1 cut(s)	1233
Sse9I	AATT	7 cut(s)	429, 473, 597, 1009, 1029, 1059, 1092
SspI	AATATT	1 cut(s)	1252
SstI	GAGCTC	1 cut(s)	12
StyD4I	CCNGG	3 cut(s)	226, 675, 871
StyI	CCWWGG	3 cut(s)	252, 645, 1024
TaaI	ACNGT	1 cut(s)	505
TaiI	ACGT	2 cut(s)	114, 482
TasI	AATT	7 cut(s)	429, 473, 597, 1009, 1029, 1059, 1092
TatI	WGTACW	1 cut(s)	1341
TauI	GCSGC	2 cut(s)	155, 458
TfiI	GAWTC	3 cut(s)	381, 931, 987
Tru1I	TTAA	2 cut(s)	660, 1272
Tru9I	TTAA	2 cut(s)	660, 1272
TscAI	CASTG	3 cut(s)	677, 784, 1357
TseFI	GTSAC	1 cut(s)	718
Tsp45I	GTSAC	1 cut(s)	718
TspDTI	ATGAA	4 cut(s)	701, 716, 912, 1104
TspGWI	ACGGA	3 cut(s)	62, 506, 788
TspRI	CASTG	3 cut(s)	677, 784, 1357
VpaK11BI	GGWCC	1 cut(s)	650
XapI	RAATTY	1 cut(s)	1029
XceI	RCATGY	3 cut(s)	904, 1233, 1348
ZraI	GACGTC	1 cut(s)	112
Zsp2I	ATGCAT	1 cut(s)	1186

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.