Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0001576

Physical Location & Seq

Genomic Coordinates Forward (+)

50154396 .. 50156177

Gene Structure 1782 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00202230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGATGCGGAGAACTGCCTCTTCTTGTTATTGCAACAACACTGGAGGTATGCCTCGTCTTCAGTCTACTTTTGTTTCCTTCAACCATTACTCCTCTGCACTTTTTCATTCCCAAGCTTCAAAGCCTAGGAACACCCAGATTGTAAGAGACCCACCCAAAGTCACTAGTCTCCAGGATGGTTTAAGCTTGTTCAATACTATGCTTCAAATGCGTCCTCTGCCTTCTATTGTCTGTTTCAATAAAATCTTGGGTCAAATTGCTCAATTGAAACATCATTCGGCACCCATCTCTTTGTTTCACCAAATGTGTCTGCTGCGAGTTGTTCCTGATGTTTATACTTTGAACATCTTGATCAACTGCTTTTGTCATTTGAACCAAATGGGATTCAGCTTGTCTGTGTTGGGAAAGTTCTTCAAATTTGGTTATGAACCAGATGCTACCACCCTCAACACTCTGATCAAGGGTTTTTTCCTTGAGAGTAAAGTCTCTGAGGCAGCAGCACTTTTCGGCAAAATGCTGCTCCAAGGTTGTAAGCCGAATGAGTTTACTTTTGGAACACTAATAAAGGGCTATTGCATGATGGGAAATAATACTGCAGCTATTCAATTGCTTAGAAAGATGGAACAACATTCTCGAGATTGTAAGCCTAATGTGGTTGTCTATAATATCATCATTGATAGTCTTTGTAAGGACACACTAGTTCCTGATGCATTTAAGCTCTTCTCAGAAATGATTAGTAGGGGTATTGCCCCTGACGTCATTGCTTATACCTCTTTGATTCATGGAGTTTGCAAATTAGGCCAGTGGAAAGAAGCTACAAGATTGTTGAATGAGATGGTCAGTAAAGATATCTTCCCGAATTTAGTAACCTTCAGTATCCTGGTCGATACACTTTGTAAGGAGGGGTTGGTTGTGAAAGCACAAAGTGTGCTTGAAATGATGATTCAAAGAGGTATCAAACCTGATACAGTCACCTACAGTTCACTTATGGATGGCTACTGTCTACGAGGAGAAATGGAGAAAGCTAAAGAGGTTTTTGATCTTATGATTAGCCAAGCCTCCATTGTCGATCCTCATAGTTATAACATACTGATAAATGGATATTGTAAGCATAAACGGATTGATGACGCCACCAGGGTTTTTCAGGAAATGTCTGATAGTGGACTGGTTCCAAATACCATTACATATACTGCTCTTATGGATGGTTTTTGCAAAGTAGGAAGAATACAAGATGCACAGAAATTGTTCAGTAAGATGCAAGCTTGCGGCCAACTTCCAAATATTCATACTTATACTGTTTTACTGGATGGCCTGTGTAAAAACCAACAACTTGCAATGGCAATGGAGTTGTTTAGAGAGATGGAATGCATGAAGCTGGATTTGGATATAGTAATTTACAGTACTCTTATTGAAGGTTTGTGTATAGCTGGAAAAATTGAATATGCAAGGGACCTCTTTTACGGTTTATCAGCAAAAGGACTTCAACCTAATGTCAGGACCTACAATATATTTATTAAGGGACTTTGTGACGGAGGCTTAATAACTGAAGCAGAAAAGTTGCTTATAGAAATGGAAGATAAATGCCATTCTCCAAATGATTGCACATATAACATAATTATCCGAGGGTTTCTCAATAATATCGAGACAGTAAAGGCGGTGAAACTTGTTCACAAAATGATGGACATGGGTTTCTCTGCAGATGCCTGGACGATGGAATTAATCATTGGTTTATTGTCCCAAGATAAAGTAGATCCTGCTTTGTTGTCATTGATAGAAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0000966 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004016 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009791 GO:0009845 GO:0009975 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0016829 GO:0016849 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048856 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0090351 GO:0090615 GO:0097159 GO:0140053 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

593

Amino Acids

66.54

Weight (kDa)

7.94

Isoelectric Point (pI)

39.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	74 - 123	2.1e-08	PPR repeat family
PPR_1	PF12854	141 - 172	3.4e-06	PPR repeat
PPR_2	PF13041	144 - 192	1e-12	PPR repeat family
PPR_1	PF12854	176 - 208	9.7e-11	PPR repeat
PPR_1	PF12854	212 - 244	4.5e-12	PPR repeat
PPR_2	PF13041	216 - 265	1.5e-17	PPR repeat family
PPR	PF01535	219 - 249	2.1e-06	PPR repeat
PPR_long	PF17177	232 - 331	1.6e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	239 - 298	3.4e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	247 - 280	9.3e-11	PPR repeat
PPR_2	PF13041	251 - 300	7.9e-17	PPR repeat family
PPR	PF01535	255 - 284	7.8e-07	PPR repeat
PPR_1	PF12854	282 - 314	5.4e-09	PPR repeat
PPR_2	PF13041	297 - 334	5.4e-10	PPR repeat family
PPR_1	PF12854	317 - 349	9.1e-12	PPR repeat
PPR	PF01535	324 - 351	1.4e-07	PPR repeat
PPR_long	PF17177	338 - 470	2e-10	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	342 - 454	2e-09	Fungal tetratrico peptide repeats
PPR_2	PF13041	359 - 405	2.8e-18	PPR repeat family
PPR_1	PF12854	359 - 385	7.1e-10	PPR repeat
PPR	PF01535	360 - 389	1.2e-08	PPR repeat
TPR_24	PF23276	377 - 486	1.7e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	379 - 436	5.7e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	388 - 420	2.8e-12	PPR repeat
PPR_2	PF13041	391 - 440	2.4e-18	PPR repeat family
PPR	PF01535	394 - 423	2.3e-07	PPR repeat
PPR_1	PF12854	423 - 455	1.9e-08	PPR repeat
PPR	PF01535	430 - 457	5.8e-06	PPR repeat
PPR_3	PF13812	450 - 506	1.7e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	462 - 510	1.1e-12	PPR repeat family
PPR_1	PF12854	492 - 525	1.9e-11	PPR repeat
PPR_2	PF13041	508 - 544	1.1e-06	PPR repeat family
PPR_2	PF13041	531 - 575	1.4e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49830 AT5G67630
fragaria_vesca	FvH4_1g17590
malus_domestica	MD02G1184700.v1.1 MD08G1213300.v1.1
prunus_persica	Prupe.1G544700_v2.0.a1
pyrus_communis	pycom02g14980 pycom15g25960
rosa_chinensis	RchiOBHm_Chr2g0107901 RchiOBHm_Chr6g0265871 RchiOBHm_Chr6g0265881 RchiOBHm_Chr6g0265891 RchiOBHm_Chr6g0265911
rosa_laevigata	RLG00000014147 RLG00000014151 RLG00000014152 RLG00000017626 RLG00000030880
rosa_multiflora	Rmu_sc0000149.1_g000017 Rmu_sc0001484.1_g000033 Rmu_sc0006952.1_g000010 Rmu_sc0006952.1_g000012 Rmu_sc0006952.1_g000034 Rmu_sc0013320.1_g000004 Rmu_sc0013320.1_g000009
rosa_roxburghii	Rroxscaffold_2G00135810 Rroxscaffold_7G00202230 Rroxscaffold_7G00202270 Rroxscaffold_7G00202280 Rroxscaffold_7G00202290
rosa_rugosa	Rorug02G0148600 Rorug02G0148600 Rorug06G0021100 Rorug06G0021100 Rorug06G0021300
rosa_samantha	Rh2AG197900 Rh2BG210800 Rh2CG202600 Rh2DG205600 Rh6BG142600 Rh6BG142700 Rh6CG139200 Rh6CG139300 Rh6DG126800 Rh6DG126900
rosa_wichuraiana	Rw0G009670 Rw0G009680 Rw2G015700 Rw6G012330 Rw6G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1083
AatII	GACGTC	1 cut(s)	759
AccB1I	GGYRCC	1 cut(s)	280
AccI	GTMKAC	2 cut(s)	65, 1003
AciI	CCGC	3 cut(s)	7, 1266, 1655
AclWI	GGATC	2 cut(s)	1064, 1745
AcoI	YGGCCR	1 cut(s)	1267
AcsI	RAATTY	2 cut(s)	416, 859
AcuI	CTGAAG	3 cut(s)	44, 856, 1566
AcyI	GRCGYC	2 cut(s)	756, 1128
AdeI	CACNNNGTG	1 cut(s)	926
AfaI	GTAC	1 cut(s)	1402
AhlI	ACTAGT	2 cut(s)	164, 697
AjnI	CCWGG	4 cut(s)	171, 879, 1133, 1703
AjuI	GAANNNNNNNTTGG	4 cut(s)	1364, 1396, 1707, 1739
Alw26I	GTCTC	4 cut(s)	141, 173, 490, 1637
AlwI	GGATC	2 cut(s)	1064, 1745
Ama87I	CYCGRG	1 cut(s)	633
AoxI	GGCC	3 cut(s)	799, 1267, 1309
ApeKI	GCWGC	5 cut(s)	313, 494, 497, 517, 596
ApoI	RAATTY	2 cut(s)	416, 859
AseI	ATTAAT	1 cut(s)	1718
Asp700I	GAANNNNTTC	1 cut(s)	1244
AspA2I	CCTAGG	1 cut(s)	125
AspS9I	GGNCC	2 cut(s)	1450, 1497
AsuHPI	GGTGA	3 cut(s)	290, 964, 1669
AvaI	CYCGRG	1 cut(s)	633
AvaII	GGWCC	2 cut(s)	1450, 1497
AvrII	CCTAGG	1 cut(s)	125
BanI	GGYRCC	1 cut(s)	280
BbsI	GAAGAC	1 cut(s)	50
BbvI	GCAGC	5 cut(s)	300, 504, 506, 509, 608
BciT130I	CCWGG	4 cut(s)	173, 881, 1135, 1705
BciVI	GTATCC	1 cut(s)	887
BclI	TGATCA	2 cut(s)	351, 456
BcoDI	GTCTC	4 cut(s)	141, 173, 490, 1637
BcuI	ACTAGT	2 cut(s)	164, 697
BfaI	CTAG	3 cut(s)	126, 165, 698
BfmI	CTRYAG	3 cut(s)	594, 976, 1695
BfuI	GTATCC	1 cut(s)	887
BisI	GCNGC	6 cut(s)	314, 495, 498, 518, 597, 1267
BlnI	CCTAGG	1 cut(s)	125
BlsI	GCNGC	6 cut(s)	315, 496, 499, 519, 598, 1268
BmcAI	AGTACT	1 cut(s)	1402
Bme1390I	CCNGG	4 cut(s)	173, 881, 1135, 1705
Bme18I	GGWCC	2 cut(s)	1450, 1497
BmeT110I	CYCGRG	1 cut(s)	633
BmgT120I	GGNCC	2 cut(s)	1450, 1497
BmiI	GGNNCC	3 cut(s)	282, 1170, 1451
BmrFI	CCNGG	4 cut(s)	173, 881, 1135, 1705
BmsI	GCATC	5 cut(s)	424, 697, 1222, 1245, 1690
BpiI	GAAGAC	1 cut(s)	50
BplI	GAGNNNNNCTC	2 cut(s)	1614, 1646
BpmI	CTGGAG	2 cut(s)	63, 155
BpuEI	CTTGAG	1 cut(s)	494
BsaHI	GRCGYC	2 cut(s)	756, 1128
BsaI	GGTCTC	1 cut(s)	141
BsaJI	CCNNGG	4 cut(s)	125, 523, 1134, 1621
BsaXI	ACNNNNNCTCC	2 cut(s)	74, 104
Bse1I	ACTGG	4 cut(s)	46, 802, 1170, 1308
Bse3DI	GCAATG	3 cut(s)	759, 1341, 1347
BseBI	CCWGG	4 cut(s)	173, 881, 1135, 1705
BseDI	CCNNGG	4 cut(s)	125, 523, 1134, 1621
BseGI	GGATG	4 cut(s)	181, 997, 1207, 1312
BseMI	GCAATG	3 cut(s)	759, 1341, 1347
BseMII	CTCAG	2 cut(s)	480, 738
BseNI	ACTGG	4 cut(s)	46, 802, 1170, 1308
BseRI	GAGGAG	2 cut(s)	82, 1023
BseXI	GCAGC	5 cut(s)	300, 504, 506, 509, 608
BsgI	GTGCAG	1 cut(s)	81
BshFI	GGCC	3 cut(s)	801, 1269, 1311
BshNI	GGYRCC	1 cut(s)	280
BsiHKCI	CYCGRG	1 cut(s)	633
BslFI	GGGAC	3 cut(s)	1463, 1533, 1720
BsmAI	GTCTC	4 cut(s)	141, 173, 490, 1637
BsmFI	GGGAC	3 cut(s)	1463, 1533, 1720
BsmI	GAATGC	1 cut(s)	1370
BsnI	GGCC	3 cut(s)	801, 1269, 1311
Bso31I	GGTCTC	1 cut(s)	141
BsoBI	CYCGRG	1 cut(s)	633
Bsp143I	GATC	5 cut(s)	351, 456, 1039, 1069, 1750
BspACI	CCGC	3 cut(s)	7, 1266, 1655
BspANI	GGCC	3 cut(s)	801, 1269, 1311
BspCNI	CTCAG	2 cut(s)	481, 737
BspLI	GGNNCC	3 cut(s)	282, 1170, 1451
BspMAI	CTGCAG	2 cut(s)	598, 1699
BspPI	GGATC	2 cut(s)	1064, 1745
BspQI	GCTCTTC	1 cut(s)	725
BspT107I	GGYRCC	1 cut(s)	280
BspTNI	GGTCTC	1 cut(s)	141
BsrDI	GCAATG	3 cut(s)	759, 1341, 1347
BsrI	ACTGG	4 cut(s)	46, 802, 1170, 1308
BssECI	CCNNGG	4 cut(s)	125, 523, 1134, 1621
BssMI	GATC	5 cut(s)	351, 456, 1039, 1069, 1750
BssNI	GRCGYC	2 cut(s)	756, 1128
BssT1I	CCWWGG	2 cut(s)	125, 523
Bst2UI	CCWGG	4 cut(s)	173, 881, 1135, 1705
Bst4CI	ACNGT	7 cut(s)	970, 980, 1001, 1297, 1400, 1463, 1648
Bst6I	CTCTTC	2 cut(s)	25, 725
BstACI	GRCGYC	2 cut(s)	756, 1128
BstC8I	GCNNGC	2 cut(s)	1260, 1264
BstDEI	CTNAG	3 cut(s)	489, 611, 724
BstF5I	GGATG	4 cut(s)	181, 997, 1207, 1312
BstKTI	GATC	5 cut(s)	354, 459, 1042, 1072, 1753
BstMAI	GTCTC	4 cut(s)	141, 173, 490, 1637
BstMBI	GATC	5 cut(s)	351, 456, 1039, 1069, 1750
BstMWI	GCNNNNNNNGC	3 cut(s)	208, 217, 798
BstNI	CCWGG	4 cut(s)	173, 881, 1135, 1705
BstSCI	CCNGG	4 cut(s)	171, 879, 1133, 1703
BstSFI	CTRYAG	3 cut(s)	594, 976, 1695
BstV1I	GCAGC	5 cut(s)	300, 504, 506, 509, 608
BstV2I	GAAGAC	1 cut(s)	50
BstX2I	RGATCY	1 cut(s)	1750
BstYI	RGATCY	1 cut(s)	1750
BsuI	GTATCC	1 cut(s)	887
BsuRI	GGCC	3 cut(s)	801, 1269, 1311
BtsCI	GGATG	4 cut(s)	181, 997, 1207, 1312
BtsIMutI	CAGTG	2 cut(s)	39, 809
Cac8I	GCNNGC	2 cut(s)	1260, 1264
Cfr13I	GGNCC	2 cut(s)	1450, 1497
CseI	GACGC	2 cut(s)	200, 1136
Csp6I	GTAC	1 cut(s)	1401
CviAII	CATG	4 cut(s)	577, 782, 1369, 1684
CviQI	GTAC	1 cut(s)	1401
DdeI	CTNAG	3 cut(s)	489, 611, 724
DpnI	GATC	5 cut(s)	353, 458, 1041, 1071, 1752
DpnII	GATC	5 cut(s)	351, 456, 1039, 1069, 1750
DraIII	CACNNNGTG	1 cut(s)	926
EaeI	YGGCCR	1 cut(s)	1267
Eam1104I	CTCTTC	2 cut(s)	25, 725
EarI	CTCTTC	2 cut(s)	25, 725
Eco130I	CCWWGG	2 cut(s)	125, 523
Eco31I	GGTCTC	1 cut(s)	141
Eco32I	GATATC	1 cut(s)	850
Eco47I	GGWCC	2 cut(s)	1450, 1497
Eco57I	CTGAAG	3 cut(s)	44, 856, 1566
Eco88I	CYCGRG	1 cut(s)	633
EcoO109I	RGGNCCY	2 cut(s)	1450, 1497
EcoRII	CCWGG	4 cut(s)	171, 879, 1133, 1703
EcoRV	GATATC	1 cut(s)	850
EcoT14I	CCWWGG	2 cut(s)	125, 523
EcoT22I	ATGCAT	2 cut(s)	712, 1370
ErhI	CCWWGG	2 cut(s)	125, 523
FaeI	CATG	4 cut(s)	580, 785, 1372, 1687
FaqI	GGGAC	3 cut(s)	1463, 1533, 1720
FatI	CATG	4 cut(s)	576, 781, 1368, 1683
FbaI	TGATCA	2 cut(s)	351, 456
FblI	GTMKAC	2 cut(s)	65, 1003
Fnu4HI	GCNGC	6 cut(s)	314, 495, 498, 518, 597, 1267
FokI	GGATG	4 cut(s)	188, 1004, 1214, 1319
Fsp4HI	GCNGC	6 cut(s)	314, 495, 498, 518, 597, 1267
FspBI	CTAG	3 cut(s)	126, 165, 698
GluI	GCNGC	6 cut(s)	314, 495, 498, 518, 597, 1267
GsuI	CTGGAG	2 cut(s)	63, 155
HaeIII	GGCC	3 cut(s)	801, 1269, 1311
HgaI	GACGC	2 cut(s)	200, 1136
Hin1I	GRCGYC	2 cut(s)	756, 1128
Hin1II	CATG	4 cut(s)	580, 785, 1372, 1687
HindIII	AAGCTT	3 cut(s)	114, 184, 1260
HinfI	GANTC	3 cut(s)	384, 778, 943
HphI	GGTGA	3 cut(s)	290, 964, 1669
Hpy166II	GTNNAC	6 cut(s)	66, 546, 983, 1004, 1163, 1669
Hpy188I	TCNGA	5 cut(s)	456, 490, 727, 1156, 1622
Hpy188III	TCNNGA	9 cut(s)	326, 349, 633, 635, 704, 856, 1145, 1495, 1642
Hpy8I	GTNNAC	6 cut(s)	66, 546, 983, 1004, 1163, 1669
HpyAV	CCTTC	4 cut(s)	88, 231, 880, 1406
HpyCH4III	ACNGT	7 cut(s)	970, 980, 1001, 1297, 1400, 1463, 1648
HpyCH4IV	ACGT	1 cut(s)	756
HpyF10VI	GCNNNNNNNGC	3 cut(s)	208, 217, 798
HpyF3I	CTNAG	3 cut(s)	489, 611, 724
HpySE526I	ACGT	1 cut(s)	756
Hsp92I	GRCGYC	2 cut(s)	756, 1128
Hsp92II	CATG	4 cut(s)	580, 785, 1372, 1687
Ksp22I	TGATCA	2 cut(s)	351, 456
Kzo9I	GATC	5 cut(s)	351, 456, 1039, 1069, 1750
LguI	GCTCTTC	1 cut(s)	725
LmnI	GCTCC	1 cut(s)	525
Lsp1109I	GCAGC	5 cut(s)	300, 504, 506, 509, 608
LweI	GCATC	5 cut(s)	424, 697, 1222, 1245, 1690
MaeI	CTAG	3 cut(s)	126, 165, 698
MaeII	ACGT	1 cut(s)	756
MaeIII	GTNAC	4 cut(s)	160, 865, 970, 1526
MalI	GATC	5 cut(s)	353, 458, 1041, 1071, 1752
MboI	GATC	5 cut(s)	351, 456, 1039, 1069, 1750
MboII	GAAGA	7 cut(s)	12, 50, 403, 712, 844, 1233, 1586
MfeI	CAATTG	2 cut(s)	263, 605
MflI	RGATCY	1 cut(s)	1750
Mph1103I	ATGCAT	2 cut(s)	712, 1370
MroXI	GAANNNNTTC	1 cut(s)	1244
MseI	TTAA	5 cut(s)	182, 714, 1515, 1538, 1718
MspR9I	CCNGG	4 cut(s)	173, 881, 1135, 1705
MunI	CAATTG	2 cut(s)	263, 605
Mva1269I	GAATGC	1 cut(s)	1370
MvaI	CCWGG	4 cut(s)	173, 881, 1135, 1705
MwoI	GCNNNNNNNGC	3 cut(s)	208, 217, 798
NdeII	GATC	5 cut(s)	351, 456, 1039, 1069, 1750
NlaIII	CATG	4 cut(s)	580, 785, 1372, 1687
NlaIV	GGNNCC	3 cut(s)	282, 1170, 1451
NmuCI	GTSAC	3 cut(s)	160, 970, 1526
NsiI	ATGCAT	2 cut(s)	712, 1370
PaeR7I	CTCGAG	1 cut(s)	633
PciSI	GCTCTTC	1 cut(s)	725
PctI	GAATGC	1 cut(s)	1370
PdmI	GAANNNNTTC	1 cut(s)	1244
PfeI	GAWTC	3 cut(s)	384, 778, 943
PfoI	TCCNGGA	1 cut(s)	171
PkrI	GCNGC	6 cut(s)	315, 496, 499, 519, 598, 1268
PpuMI	RGGWCCY	2 cut(s)	1450, 1497
PshBI	ATTAAT	1 cut(s)	1718
PsiI	TTATAA	1 cut(s)	1083
Psp5II	RGGWCCY	2 cut(s)	1450, 1497
Psp6I	CCWGG	4 cut(s)	171, 879, 1133, 1703
PspGI	CCWGG	4 cut(s)	171, 879, 1133, 1703
PspN4I	GGNNCC	3 cut(s)	282, 1170, 1451
PspPI	GGNCC	2 cut(s)	1450, 1497
PspPPI	RGGWCCY	2 cut(s)	1450, 1497
PstI	CTGCAG	2 cut(s)	598, 1699
PsuI	RGATCY	1 cut(s)	1750
RsaI	GTAC	1 cut(s)	1402
RsaNI	GTAC	1 cut(s)	1401
SapI	GCTCTTC	1 cut(s)	725
SaqAI	TTAA	5 cut(s)	182, 714, 1515, 1538, 1718
SatI	GCNGC	6 cut(s)	314, 495, 498, 518, 597, 1267
Sau3AI	GATC	5 cut(s)	351, 456, 1039, 1069, 1750
Sau96I	GGNCC	2 cut(s)	1450, 1497
ScaI	AGTACT	1 cut(s)	1402
ScrFI	CCNGG	4 cut(s)	173, 881, 1135, 1705
SfaNI	GCATC	5 cut(s)	424, 697, 1222, 1245, 1690
SfcI	CTRYAG	3 cut(s)	594, 976, 1695
Sfr274I	CTCGAG	1 cut(s)	633
SinI	GGWCC	2 cut(s)	1450, 1497
SlaI	CTCGAG	1 cut(s)	633
SmlI	CTYRAG	2 cut(s)	473, 633
SmoI	CTYRAG	2 cut(s)	473, 633
SpeI	ACTAGT	2 cut(s)	164, 697
SsiI	CCGC	3 cut(s)	7, 1266, 1655
SspI	AATATT	1 cut(s)	1282
SspMI	CTAG	3 cut(s)	126, 165, 698
StyD4I	CCNGG	4 cut(s)	171, 879, 1133, 1703
StyI	CCWWGG	2 cut(s)	125, 523
TaaI	ACNGT	7 cut(s)	970, 980, 1001, 1297, 1400, 1463, 1648
TaiI	ACGT	1 cut(s)	759
TaqI	TCGA	4 cut(s)	634, 885, 1068, 1641
TatI	WGTACW	1 cut(s)	1400
TauI	GCSGC	1 cut(s)	1269
TfiI	GAWTC	3 cut(s)	384, 778, 943
Tru1I	TTAA	5 cut(s)	182, 714, 1515, 1538, 1718
Tru9I	TTAA	5 cut(s)	182, 714, 1515, 1538, 1718
TscAI	CASTG	2 cut(s)	46, 809
TseFI	GTSAC	3 cut(s)	160, 970, 1526
TseI	GCWGC	5 cut(s)	313, 494, 497, 517, 596
Tsp45I	GTSAC	3 cut(s)	160, 970, 1526
TspDTI	ATGAA	5 cut(s)	95, 441, 770, 1274, 1385
TspGWI	ACGGA	2 cut(s)	1132, 1545
TspRI	CASTG	2 cut(s)	46, 809
VpaK11BI	GGWCC	2 cut(s)	1450, 1497
VspI	ATTAAT	1 cut(s)	1718
XapI	RAATTY	2 cut(s)	416, 859
XhoI	CTCGAG	1 cut(s)	633
XmaJI	CCTAGG	1 cut(s)	125
XmiI	GTMKAC	2 cut(s)	65, 1003
XmnI	GAANNNNTTC	1 cut(s)	1244
XspI	CTAG	3 cut(s)	126, 165, 698
ZraI	GACGTC	1 cut(s)	757
ZrmI	AGTACT	1 cut(s)	1402
Zsp2I	ATGCAT	2 cut(s)	712, 1370

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.