Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0001576

Physical Location & Seq

Genomic Coordinates Forward (+)

50266403 .. 50268192

Gene Structure 1790 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00202290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGATGCGGAGAGCTGCTGCTGCTTCTTCTTCTTATTGCAACAACAGAGGTAGAGGAGGAGGAGTGGCCAGCACTATTAGAAACCCACCCAAGCTCACTAATCTTGGGGTTGGGGATGGCGTAAGTTTGTTCAATGGGATGCTTCAAATGCGTCCTCTGCCTTGTGTTGTCCGTTTCAATCAAATCATGGGTCACATCGCAAAATTGAAACATTATCAGGCAGTCATTTCTCTGTATACCCAAATGGATCGGCTGCGAGTTGTTCCCGATGCTTACACTCTCAATATTATTATCAATTGCTTCTGTCATTTGAACCAAATGGGATTCAGTTTGTCTGTGTTGGGAAAATTCTTCAAATTTGGTATTCAACCAAATATCACAACCCTCAACACTCTTATCAAGGGCTTTTTCCTTGAAGGGAAAGTTTCTCAGGCAGCACTACTTTTCAGTACAATGGTGGAGCAAGGTTGTAAGCCAAATGATGTTACTTTCGGAACCCTAATAAAGGGCTATTGCATGATGGGAAATAATACTGCAGCTATTCAATTGCTTAGGAAGATGGAACAACAATCTCGAGATTGTAAGCCTAATGTGGTTGTCTATAATATCATCATTGACAGTCTCTGTAAGGATACACTAGTTCCTGATGCAGTTAAGCTCTTTTCAGAAATGATTAGTAGGGGTATCGCCCCTGACGTCATTACTTATACCTCTTTGATTCATGGAGTTTGCAAACTAGGCCACTGGAAAGAAGCTACAAGATTGTTGAATGAGATGGTCGGTAAAGATATCTTCCCGAATTTAGTAACCTTCAGTATCCTGGTCGATACACTTTGTAAGAAGGGGATGGTTGTGGAAGCACAATGTGTGCTTGAAATGATGATTCAAAGAGGTATCAAACCTGATACAGTCACCTGCAGTTCACTTATGGATGGCTACTGTCTGCGAGGAGAAATGGAGAAAGCTAAAGTGGTTTTTGATATCATGAATAGCAAGGGCTCCGTTGTTAATGCTTATAGTTATACCATACTGATAAATGGATATTGTAGGCGTAAAAGGATAGATGAGGCCATCAGGCTTTTTCACGAAATGTCTGCTAGGGGACTGGTTCCAAATACCGTCACATATACTGCTCTTATGGATGGTTTTTGCAAAGTGGGAAGAATACTAGATGCCCAGAGATTGTTCAGTAAGTTGCATGCTTGTGGCCAAGTTCTTGATGTTCAAACTTATGCCGTTCTACTGGATGGCCTATTTAAAAACCAACAACTTGCTATGGCAATGGAGTTGTTCGGGGAGTTGGAATGCATGAAGATGGATTTGAATATAGTAATATACAGGACTCTTATTGAAGGTTTGTGTATAGCTGGAAAAATTGAATCTGCAAAGGACCACTTTTATGGTTTATCATCAAAAGGACTTGAACCTGATGCGAGGACGTACACTATAATGATCAAGGGACTTTGTGATGGAGGCTTAATTAGTGAAGCAGAAAAGTTGCTTAGGGAAATGGAACAGAAAAGCGTTGCTCCTGATGATTGCACATATAACACAATTATCCGAGGGTTTCTCAATAATGACGAGACAGTAAAGGCAGTGGGACTTGTTCACGAAATGATGGACAGGGGTTTCTCTGCAGATGCATGGACGATGGAATTAATCATTAGTTTATTGTCTAAAGATAAAGTAGATCCTGGTTTGTTGTCATTGATAGAAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0000966 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004016 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009791 GO:0009845 GO:0009975 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0016829 GO:0016849 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048856 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0090351 GO:0090615 GO:0097159 GO:0140053 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

573

Amino Acids

63.68

Weight (kDa)

8.55

Isoelectric Point (pI)

24.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	54 - 103	1.1e-09	PPR repeat family
PPR_3	PF13812	119 - 171	3e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	121 - 153	1.6e-06	PPR repeat
PPR_2	PF13041	124 - 172	3.2e-14	PPR repeat family
PPR_1	PF12854	156 - 188	8.8e-11	PPR repeat
PPR_2	PF13041	162 - 210	1.1e-10	PPR repeat family
PPR_3	PF13812	162 - 206	4.6e-06	Pentatricopeptide repeat domain
PPR_long	PF17177	179 - 310	5.6e-08	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	192 - 224	1.1e-11	PPR repeat
PPR_2	PF13041	196 - 245	1.4e-18	PPR repeat family
PPR	PF01535	199 - 229	2.5e-06	PPR repeat
PPR_3	PF13812	219 - 278	1.7e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	227 - 260	1.4e-12	PPR repeat
PPR_2	PF13041	231 - 280	1.2e-16	PPR repeat family
PPR	PF01535	234 - 263	6.2e-07	PPR repeat
PPR_1	PF12854	262 - 294	2.5e-08	PPR repeat
PPR_2	PF13041	275 - 314	5.6e-09	PPR repeat family
PPR_1	PF12854	297 - 329	1.8e-07	PPR repeat
PPR_2	PF13041	301 - 350	1.2e-14	PPR repeat family
TPR_24	PF23276	322 - 433	1.5e-10	Fungal tetratrico peptide repeats
PPR_3	PF13812	325 - 381	6.4e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	332 - 365	1.2e-11	PPR repeat
PPR_2	PF13041	337 - 385	3.4e-19	PPR repeat family
PPR	PF01535	339 - 369	7.2e-09	PPR repeat
PPR_1	PF12854	367 - 398	1.4e-10	PPR repeat
PPR_2	PF13041	371 - 420	9.1e-12	PPR repeat family
PPR_2	PF13041	442 - 490	1.3e-12	PPR repeat family
PPR_3	PF13812	470 - 523	2.6e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	472 - 505	1.3e-12	PPR repeat
PPR	PF01535	480 - 508	5.3e-07	PPR repeat
PPR_2	PF13041	492 - 524	2.5e-07	PPR repeat family
PPR_2	PF13041	511 - 558	1.6e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49830 AT5G67630
fragaria_vesca	FvH4_1g17590
malus_domestica	MD02G1184700.v1.1 MD08G1213300.v1.1
prunus_persica	Prupe.1G544700_v2.0.a1
pyrus_communis	pycom02g14980 pycom15g25960
rosa_chinensis	RchiOBHm_Chr2g0107901 RchiOBHm_Chr6g0265871 RchiOBHm_Chr6g0265881 RchiOBHm_Chr6g0265891 RchiOBHm_Chr6g0265911
rosa_laevigata	RLG00000014147 RLG00000014151 RLG00000014152 RLG00000017626 RLG00000030880
rosa_multiflora	Rmu_sc0000149.1_g000017 Rmu_sc0001484.1_g000033 Rmu_sc0006952.1_g000010 Rmu_sc0006952.1_g000012 Rmu_sc0006952.1_g000034 Rmu_sc0013320.1_g000004 Rmu_sc0013320.1_g000009
rosa_roxburghii	Rroxscaffold_2G00135810 Rroxscaffold_7G00202230 Rroxscaffold_7G00202270 Rroxscaffold_7G00202280 Rroxscaffold_7G00202290
rosa_rugosa	Rorug02G0148600 Rorug02G0148600 Rorug06G0021100 Rorug06G0021100 Rorug06G0021300
rosa_samantha	Rh2AG197900 Rh2BG210800 Rh2CG202600 Rh2DG205600 Rh6BG142600 Rh6BG142700 Rh6CG139200 Rh6CG139300 Rh6DG126800 Rh6DG126900
rosa_wichuraiana	Rw0G009670 Rw0G009680 Rw2G015700 Rw6G012330 Rw6G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	923
AatII	GACGTC	1 cut(s)	699
Acc36I	ACCTGC	1 cut(s)	923
AccI	GTMKAC	1 cut(s)	236
AciI	CCGC	1 cut(s)	7
AclWI	GGATC	2 cut(s)	255, 1685
AcoI	YGGCCR	2 cut(s)	66, 1207
AcsI	RAATTY	3 cut(s)	347, 356, 799
AcuI	CTGAAG	1 cut(s)	796
AcyI	GRCGYC	1 cut(s)	696
AdeI	CACNNNGTG	1 cut(s)	866
AfaI	GTAC	2 cut(s)	451, 1442
AfiI	CCNNNNNNNGG	1 cut(s)	505
AhlI	ACTAGT	1 cut(s)	637
AjnI	CCWGG	2 cut(s)	819, 1693
AluBI	AGCT	7 cut(s)	14, 94, 539, 658, 755, 965, 1367
AluI	AGCT	7 cut(s)	14, 94, 539, 658, 755, 965, 1367
Alw26I	GTCTC	2 cut(s)	626, 1577
AlwI	GGATC	2 cut(s)	255, 1685
AlwNI	CAGNNNCTG	1 cut(s)	624
Ama87I	CYCGRG	1 cut(s)	573
AoxI	GGCC	5 cut(s)	66, 739, 1068, 1207, 1249
ApeKI	GCWGC	6 cut(s)	14, 17, 20, 253, 434, 536
ApoI	RAATTY	3 cut(s)	347, 356, 799
ArsI	GACNNNNNNTTYG	2 cut(s)	175, 207
AseI	ATTAAT	1 cut(s)	1658
AspS9I	GGNCC	1 cut(s)	1390
AsuHPI	GGTGA	1 cut(s)	904
AvaI	CYCGRG	1 cut(s)	573
AvaII	GGWCC	1 cut(s)	1390
BaeI	ACNNNNGTAYC	2 cut(s)	624, 657
BalI	TGGCCA	2 cut(s)	68, 1209
BanII	GRGCYC	1 cut(s)	1001
BbvI	GCAGC	5 cut(s)	4, 7, 240, 446, 548
BceAI	ACGGC	1 cut(s)	1220
BcgI	CGANNNNNNTGC	2 cut(s)	1076, 1110
BciT130I	CCWGG	2 cut(s)	821, 1695
BciVI	GTATCC	2 cut(s)	625, 827
BclI	TGATCA	1 cut(s)	1452
BcoDI	GTCTC	2 cut(s)	626, 1577
BcuI	ACTAGT	1 cut(s)	637
BfaI	CTAG	4 cut(s)	638, 737, 1098, 1169
BfmI	CTRYAG	3 cut(s)	534, 916, 1635
BfuAI	ACCTGC	1 cut(s)	923
BfuI	GTATCC	2 cut(s)	625, 827
BisI	GCNGC	6 cut(s)	15, 18, 21, 254, 435, 537
BlsI	GCNGC	6 cut(s)	16, 19, 22, 255, 436, 538
Bme1390I	CCNGG	2 cut(s)	821, 1695
Bme18I	GGWCC	1 cut(s)	1390
BmeT110I	CYCGRG	1 cut(s)	573
BmgT120I	GGNCC	1 cut(s)	1390
BmiI	GGNNCC	3 cut(s)	496, 1000, 1110
BmrFI	CCNGG	2 cut(s)	821, 1695
BmsI	GCATC	6 cut(s)	129, 259, 637, 1162, 1420, 1630
BplI	GAGNNNNNCTC	2 cut(s)	1554, 1586
Bpu10I	CCTNAGC	2 cut(s)	551, 1502
BsaHI	GRCGYC	1 cut(s)	696
BsaJI	CCNNGG	1 cut(s)	1561
BsaXI	ACNNNNNCTCC	2 cut(s)	48, 78
Bsc4I	CCNNNNNNNGG	1 cut(s)	505
Bse1I	ACTGG	3 cut(s)	749, 1110, 1248
Bse3DI	GCAATG	1 cut(s)	1287
BseBI	CCWGG	2 cut(s)	821, 1695
BseDI	CCNNGG	1 cut(s)	1561
BseGI	GGATG	6 cut(s)	121, 144, 852, 937, 1147, 1252
BseLI	CCNNNNNNNGG	1 cut(s)	505
BseMI	GCAATG	1 cut(s)	1287
BseMII	CTCAG	1 cut(s)	443
BseNI	ACTGG	3 cut(s)	749, 1110, 1248
BseRI	GAGGAG	4 cut(s)	69, 72, 75, 963
BseXI	GCAGC	5 cut(s)	4, 7, 240, 446, 548
BshFI	GGCC	5 cut(s)	68, 741, 1070, 1209, 1251
BsiHKCI	CYCGRG	1 cut(s)	573
BslFI	GGGAC	3 cut(s)	1116, 1473, 1614
BslI	CCNNNNNNNGG	1 cut(s)	505
BsmAI	GTCTC	2 cut(s)	626, 1577
BsmFI	GGGAC	3 cut(s)	1116, 1473, 1614
BsmI	GAATGC	1 cut(s)	1310
BsnI	GGCC	5 cut(s)	68, 741, 1070, 1209, 1251
BsoBI	CYCGRG	1 cut(s)	573
Bsp1286I	GDGCHC	1 cut(s)	1001
Bsp143I	GATC	3 cut(s)	247, 1452, 1690
BspACI	CCGC	1 cut(s)	7
BspANI	GGCC	5 cut(s)	68, 741, 1070, 1209, 1251
BspCNI	CTCAG	1 cut(s)	442
BspHI	TCATGA	1 cut(s)	984
BspLI	GGNNCC	3 cut(s)	496, 1000, 1110
BspMAI	CTGCAG	3 cut(s)	538, 920, 1639
BspMI	ACCTGC	1 cut(s)	923
BspPI	GGATC	2 cut(s)	255, 1685
BsrDI	GCAATG	1 cut(s)	1287
BsrI	ACTGG	3 cut(s)	749, 1110, 1248
BssECI	CCNNGG	1 cut(s)	1561
BssMI	GATC	3 cut(s)	247, 1452, 1690
BssNAI	GTATAC	1 cut(s)	237
BssNI	GRCGYC	1 cut(s)	696
Bst1107I	GTATAC	1 cut(s)	237
Bst2UI	CCWGG	2 cut(s)	821, 1695
Bst4CI	ACNGT	5 cut(s)	620, 910, 941, 1120, 1588
BstACI	GRCGYC	1 cut(s)	696
BstC8I	GCNNGC	2 cut(s)	70, 1200
BstDEI	CTNAG	3 cut(s)	429, 551, 1502
BstENI	CCTNNNNNAGG	1 cut(s)	503
BstF5I	GGATG	6 cut(s)	121, 144, 852, 937, 1147, 1252
BstKTI	GATC	3 cut(s)	250, 1455, 1693
BstMAI	GTCTC	2 cut(s)	626, 1577
BstMBI	GATC	3 cut(s)	247, 1452, 1690
BstMWI	GCNNNNNNNGC	4 cut(s)	20, 148, 157, 738
BstNI	CCWGG	2 cut(s)	821, 1695
BstNSI	RCATGY	1 cut(s)	1202
BstSCI	CCNGG	2 cut(s)	819, 1693
BstSFI	CTRYAG	3 cut(s)	534, 916, 1635
BstV1I	GCAGC	5 cut(s)	4, 7, 240, 446, 548
BstX2I	RGATCY	1 cut(s)	1690
BstXI	CCANNNNNNTGG	1 cut(s)	1400
BstYI	RGATCY	1 cut(s)	1690
BstZ17I	GTATAC	1 cut(s)	237
BsuI	GTATCC	2 cut(s)	625, 827
BsuRI	GGCC	5 cut(s)	68, 741, 1070, 1209, 1251
BtgZI	GCGATG	1 cut(s)	181
BtsCI	GGATG	6 cut(s)	121, 144, 852, 937, 1147, 1252
BtsI	GCAGTG	1 cut(s)	1602
BtsIMutI	CAGTG	2 cut(s)	742, 1602
BveI	ACCTGC	1 cut(s)	923
Cac8I	GCNNGC	2 cut(s)	70, 1200
CaiI	CAGNNNCTG	1 cut(s)	624
CciI	TCATGA	1 cut(s)	984
Cfr13I	GGNCC	1 cut(s)	1390
CseI	GACGC	1 cut(s)	140
Csp6I	GTAC	2 cut(s)	450, 1441
CviAII	CATG	7 cut(s)	187, 517, 722, 985, 1199, 1309, 1644
CviQI	GTAC	2 cut(s)	450, 1441
DdeI	CTNAG	3 cut(s)	429, 551, 1502
DpnI	GATC	3 cut(s)	249, 1454, 1692
DpnII	GATC	3 cut(s)	247, 1452, 1690
DraI	TTTAAA	1 cut(s)	1258
DraIII	CACNNNGTG	1 cut(s)	866
EaeI	YGGCCR	2 cut(s)	66, 1207
Eco24I	GRGCYC	1 cut(s)	1001
Eco32I	GATATC	2 cut(s)	790, 982
Eco47I	GGWCC	1 cut(s)	1390
Eco57I	CTGAAG	1 cut(s)	796
Eco88I	CYCGRG	1 cut(s)	573
EcoNI	CCTNNNNNAGG	1 cut(s)	503
EcoRII	CCWGG	2 cut(s)	819, 1693
EcoRV	GATATC	2 cut(s)	790, 982
EcoT22I	ATGCAT	2 cut(s)	1310, 1645
EcoT38I	GRGCYC	1 cut(s)	1001
FaeI	CATG	7 cut(s)	190, 520, 725, 988, 1202, 1312, 1647
FalI	AAGNNNNNCTT	2 cut(s)	1379, 1411
FaqI	GGGAC	3 cut(s)	1116, 1473, 1614
FatI	CATG	7 cut(s)	186, 516, 721, 984, 1198, 1308, 1643
FbaI	TGATCA	1 cut(s)	1452
FblI	GTMKAC	1 cut(s)	236
Fnu4HI	GCNGC	6 cut(s)	15, 18, 21, 254, 435, 537
FokI	GGATG	6 cut(s)	128, 151, 859, 944, 1154, 1259
FriOI	GRGCYC	1 cut(s)	1001
Fsp4HI	GCNGC	6 cut(s)	15, 18, 21, 254, 435, 537
FspBI	CTAG	4 cut(s)	638, 737, 1098, 1169
GluI	GCNGC	6 cut(s)	15, 18, 21, 254, 435, 537
HaeIII	GGCC	5 cut(s)	68, 741, 1070, 1209, 1251
HgaI	GACGC	1 cut(s)	140
Hin1I	GRCGYC	1 cut(s)	696
Hin1II	CATG	7 cut(s)	190, 520, 725, 988, 1202, 1312, 1647
HinfI	GANTC	5 cut(s)	324, 718, 883, 1342, 1379
HphI	GGTGA	1 cut(s)	904
Hpy166II	GTNNAC	4 cut(s)	237, 923, 1443, 1609
Hpy188I	TCNGA	3 cut(s)	494, 667, 1562
Hpy8I	GTNNAC	4 cut(s)	237, 923, 1443, 1609
HpyAV	CCTTC	4 cut(s)	410, 820, 835, 1346
HpyCH4III	ACNGT	5 cut(s)	620, 910, 941, 1120, 1588
HpyCH4IV	ACGT	2 cut(s)	696, 1439
HpyF10VI	GCNNNNNNNGC	4 cut(s)	20, 148, 157, 738
HpyF3I	CTNAG	3 cut(s)	429, 551, 1502
HpySE526I	ACGT	2 cut(s)	696, 1439
Hsp92I	GRCGYC	1 cut(s)	696
Hsp92II	CATG	7 cut(s)	190, 520, 725, 988, 1202, 1312, 1647
Ksp22I	TGATCA	1 cut(s)	1452
Kzo9I	GATC	3 cut(s)	247, 1452, 1690
LmnI	GCTCC	3 cut(s)	460, 1004, 1534
Lsp1109I	GCAGC	5 cut(s)	4, 7, 240, 446, 548
LweI	GCATC	6 cut(s)	129, 259, 637, 1162, 1420, 1630
MaeI	CTAG	4 cut(s)	638, 737, 1098, 1169
MaeII	ACGT	2 cut(s)	696, 1439
MaeIII	GTNAC	5 cut(s)	191, 484, 805, 910, 1120
MalI	GATC	3 cut(s)	249, 1454, 1692
MboI	GATC	3 cut(s)	247, 1452, 1690
MboII	GAAGA	7 cut(s)	18, 21, 343, 568, 784, 1173, 1324
MfeI	CAATTG	2 cut(s)	295, 545
MflI	RGATCY	1 cut(s)	1690
MhlI	GDGCHC	1 cut(s)	1001
MlsI	TGGCCA	2 cut(s)	68, 1209
MluNI	TGGCCA	2 cut(s)	68, 1209
MlyI	GAGTC	1 cut(s)	1336
MmeI	TCCRAC	1 cut(s)	1281
Mox20I	TGGCCA	2 cut(s)	68, 1209
Mph1103I	ATGCAT	2 cut(s)	1310, 1645
MscI	TGGCCA	2 cut(s)	68, 1209
MseI	TTAA	5 cut(s)	654, 1008, 1257, 1478, 1658
MslI	CAYNNNNRTG	4 cut(s)	1203, 1313, 1398, 1448
Msp20I	TGGCCA	2 cut(s)	68, 1209
MspR9I	CCNGG	2 cut(s)	821, 1695
MunI	CAATTG	2 cut(s)	295, 545
Mva1269I	GAATGC	1 cut(s)	1310
MvaI	CCWGG	2 cut(s)	821, 1695
MwoI	GCNNNNNNNGC	4 cut(s)	20, 148, 157, 738
NdeII	GATC	3 cut(s)	247, 1452, 1690
NlaIII	CATG	7 cut(s)	190, 520, 725, 988, 1202, 1312, 1647
NlaIV	GGNNCC	3 cut(s)	496, 1000, 1110
NmuCI	GTSAC	3 cut(s)	191, 910, 1120
NsiI	ATGCAT	2 cut(s)	1310, 1645
NspI	RCATGY	1 cut(s)	1202
PaeI	GCATGC	1 cut(s)	1202
PaeR7I	CTCGAG	1 cut(s)	573
PagI	TCATGA	1 cut(s)	984
PaqCI	CACCTGC	1 cut(s)	923
PcsI	WCGNNNNNNNCGW	1 cut(s)	693
PctI	GAATGC	1 cut(s)	1310
PfeI	GAWTC	4 cut(s)	324, 718, 883, 1379
PkrI	GCNGC	6 cut(s)	16, 19, 22, 255, 436, 538
PleI	GAGTC	1 cut(s)	1336
PpsI	GAGTC	1 cut(s)	1336
PshBI	ATTAAT	1 cut(s)	1658
Psp6I	CCWGG	2 cut(s)	819, 1693
PspGI	CCWGG	2 cut(s)	819, 1693
PspN4I	GGNNCC	3 cut(s)	496, 1000, 1110
PspPI	GGNCC	1 cut(s)	1390
PstI	CTGCAG	3 cut(s)	538, 920, 1639
PstNI	CAGNNNCTG	1 cut(s)	624
PsuI	RGATCY	1 cut(s)	1690
RsaI	GTAC	2 cut(s)	451, 1442
RsaNI	GTAC	2 cut(s)	450, 1441
RseI	CAYNNNNRTG	4 cut(s)	1203, 1313, 1398, 1448
SaqAI	TTAA	5 cut(s)	654, 1008, 1257, 1478, 1658
SatI	GCNGC	6 cut(s)	15, 18, 21, 254, 435, 537
Sau3AI	GATC	3 cut(s)	247, 1452, 1690
Sau96I	GGNCC	1 cut(s)	1390
SchI	GAGTC	1 cut(s)	1336
ScrFI	CCNGG	2 cut(s)	821, 1695
SduI	GDGCHC	1 cut(s)	1001
SfaNI	GCATC	6 cut(s)	129, 259, 637, 1162, 1420, 1630
SfcI	CTRYAG	3 cut(s)	534, 916, 1635
Sfr274I	CTCGAG	1 cut(s)	573
SinI	GGWCC	1 cut(s)	1390
SlaI	CTCGAG	1 cut(s)	573
SmiMI	CAYNNNNRTG	4 cut(s)	1203, 1313, 1398, 1448
SmlI	CTYRAG	1 cut(s)	573
SmoI	CTYRAG	1 cut(s)	573
SpeI	ACTAGT	1 cut(s)	637
SphI	GCATGC	1 cut(s)	1202
SsiI	CCGC	1 cut(s)	7
SspI	AATATT	1 cut(s)	286
SspMI	CTAG	4 cut(s)	638, 737, 1098, 1169
StyD4I	CCNGG	2 cut(s)	819, 1693
TaaI	ACNGT	5 cut(s)	620, 910, 941, 1120, 1588
TaiI	ACGT	2 cut(s)	699, 1442
TaqI	TCGA	2 cut(s)	574, 825
TatI	WGTACW	1 cut(s)	449
TfiI	GAWTC	4 cut(s)	324, 718, 883, 1379
Tru1I	TTAA	5 cut(s)	654, 1008, 1257, 1478, 1658
Tru9I	TTAA	5 cut(s)	654, 1008, 1257, 1478, 1658
TscAI	CASTG	2 cut(s)	749, 1602
TseFI	GTSAC	3 cut(s)	191, 910, 1120
TseI	GCWGC	6 cut(s)	14, 17, 20, 253, 434, 536
Tsp45I	GTSAC	3 cut(s)	191, 910, 1120
TspDTI	ATGAA	3 cut(s)	710, 1001, 1325
TspGWI	ACGGA	2 cut(s)	161, 991
TspRI	CASTG	2 cut(s)	749, 1602
VpaK11BI	GGWCC	1 cut(s)	1390
VspI	ATTAAT	1 cut(s)	1658
XagI	CCTNNNNNAGG	1 cut(s)	503
XapI	RAATTY	3 cut(s)	347, 356, 799
XceI	RCATGY	1 cut(s)	1202
XhoI	CTCGAG	1 cut(s)	573
XmiI	GTMKAC	1 cut(s)	236
XspI	CTAG	4 cut(s)	638, 737, 1098, 1169
ZraI	GACGTC	1 cut(s)	697
Zsp2I	ATGCAT	2 cut(s)	1310, 1645

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.