Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0001547

Physical Location & Seq

Genomic Coordinates Forward (+)

1498681 .. 1511405

Gene Structure 12725 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g02850.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3363 bp

ATGCCTAGAAAACGAAGAATACGTGATAATAGTTGTTCACCTCTTTTCTCTGATCAAGTTGACCATGTTGTTCCTTGCGTGACTCCTCCTGCAAAAAGACAAGGGAAAAGTGATTCTTCTTCTGTTAAGAAAGCCAAGCATTGTGGTGGTGTTGGGTTGGTTGGTGTACAATTGAACGTTGGTTCTTCTCCAAGTGTTGGTTCTTCTCCAAGTTCATCTAATATAAGGATGGTTGGAATAGATGAGTGTAATGATTGTTCAGCGGATAGAGGAATCGACGCTTTGAATGTGCAGCGGGTTAATGTTGGGCAATCATGTTATCAGAGGAAGAGAAGGATACGAGGTATAACTTCAGCATACGTAGATTTTGGAGATATGACAAATGTATGTGTTGATTGTGATGCGCTGTTTTGGTTACGTGAGTCGAAAAATGTTCCAAAAAATAGTCAACCTATTTACACAGGTTGCTGCCAGGAAGGCCGGGTCAGAGTTCCGCGTGCCAAACCCACCCCAGCTTTTTTGGAACATTTGCTAGACGCTGGAAATGGTCGCCAAAGCGTAGAATTTAGAAAGAACATTCGAGCTTATAACAGCACATTTGCATTTACATCAATGGGAGCTAATGTGGACACAACAGTCAATGATGGTCATGGTCCTTATGTTTTCAAGATTAGTGGGCAGATATATCATCTTATGGGTTCATTGATTCCTCCAGTAGGTGAATTGCCTAAATTTGCACAATTGTATATATATGATACAGAAAATGAAGTTGCTAATCGTCAGCGAGCCATTGATGGTTTGGACTTGGATGTTTTCAGTAGATTGATTGACATGTTTGATGAAAACAATGAATTAGTCCAGTATTATCGATCTCTTCGGAACAAATACAATGACGCATCTTTGCGTTCTATGAATTTGACAATTCTTGACATTGATATGATAGGGGATAGACAATATGATGTCCCGAGTAGTAGTGAGGTTGCTGGTCTCATTGTTGGTGATATTGGATTGTACGAGGCAAATAGAGATGTTGTTGTGGACACTGTTGCGGCTGGATTACAGCGAGTATCAAGATTACATCCAAAATTCATGTCATTCCAGTATCCTATTCTCTTCCCTTATGGTGAAGATGGTTATCACATTGATTTGAAATTATGTACGCGCAAAGATAATCAAGTGCGGAAGCGAGAAAAAATGTCTATGCGTGGTTTTATGTCTTACCAAATACATGAGCGCGAAAATGAATCAAACACTTTGTTCAAAGCAGGTCGTCTGTTTCAACAATTCTTGGTTGATGCATATGCAAATGTTGAAGAGGACAGATTGTTTTATATTAGAAAAAATCAACGCGATATTAGGAGTGAGACTTACGAGGGTATATGTGATGCCTCATTAAGAGGACATGATGATGGTGAAAATGTTGGGAAGAGAATTATTTTACCTAGCACACACACTAGGAGTCCACGATATATGATAAAGCACTACCATGATGCTATGGCTTTGTGTCGAAAGTATGGCCCTCCAGATTTGTTCATAACATTCACTTGCAATCCAAAGTGGCCTGAGATTAGGCGAGCATTGCAAAACAAACATGGTGACAGACCTGAAGATCGCCCAGATGTTGTCGCAAGAGTTTTCAAAATGAAACATGATGATCTTATTGAATACTTTAAGTCTGGGAAGCCATTTGGCAAGATCATTGCAGATTCAATCATCTCTGCTGAGCTGCCCGATAAGAATGCAAAACCAATCTTATTTGACATTGTTCAACAATTTATGATCCATGGACCATGTGGTGTGATCAACCCTAGAGCACCCTTGTACAGACGTCGTGATGACGCCTTTAAATTTGTTATGAAAAATGATGTGAGAGTTGACAATGCTTTTGTTGTTCCTTATAACGCTGAACTTTTGTTAAGGCTTTGTTTAGTTTTTACAGACAACACTATGTCAGCAACAATCACTCCAATTTCAGCCATACAACCATCTGAAAATGGGAAGACTATAGAGGTTCGAGTATGTCGAATATGGAGAGGGAAAATATTAAATCCTATTGAACGAAATGAAGGTCTGCAATGTGTATTGGTTGACAGAAATATGAATGCAATTCATGCAATCATAAAAGAAGCATACTATGATTATGTCAAGGAGAAACTTATGGTAGGATGTGTGTACCGGATATCAAAATTTCACTCCAAAGAATCCCAAGACAAGTACATCATCGTGGAACATAGGGCGCAGTTGTTATTTAACAACAGGACTCAGTTTATTCCTCTGCCTAAATTGCCTGATATTCCTCAGCATTGGTTTCAATTTGTGGATTTTGATAAGCTTCATATGCGTGAGAATAATGACACAGTTCTGACAGACCTCATTGGTCGACTGAAGCTGGTGTATCCACTGGAAGAAGCATTTATCGATGGGAGGAAAGCACTGAAACGTTTACTCCACATACAAGACGCAAGGAGGCAGGATTTGAAACTCACTTTGTGGGGAACACTTGCATCTGAATTTGATGTTGATATGATAAAAACTTTACCACCTCCAGTTGTAATGGCCTTCACAAGCACGAAAGTCAGGCGCTATGAGAACACTATTGTGAACAATGGGTTGAGTACATGTCTGTTTATTAACCCAGCCATTCCTGAGATAGAAGAATATAGAGCAAACTTCAATAAGCCTTACCATGCTCCAAAGTTTATAACAACATCATCTGCACGTCATGAACCTGCTCCTGCTTATCGAAATGAAGATGTAATCAATGTCAGCACCTTGAACTTGCAGGCTGGAAAAAAAGACAAGAGTCCCACTTTTGTCTGCAAAGCTAAGATTACAAAGTTTATGGTTCAACAAGGCTGGTATTACCTGGGTTGCCCCACATGTTGCAAGACTCTCAGGTTGGATCATAATTCTGGAAAGCTTTGTTGTGGAAATCATGGAGAGCAGATTGGCCATCCCATATACAAAATGGAACTACTGCTTGAGGATGAAGATGATTCAACAACAGCTACAATCATAGGTAAAGCAGCGGACACCCTCTTTGGAATAGCATGTCATGAGCTGGTGAATGAAAAAGGAGAGGATGACAAGTACAATGTTCCCTCTGCAATAGAGAAGGCAAAGAATCAGTATCATGTGTGGCGTATTGGCTATGGCCTTAGAGATGAGTTCTTGGTGAAGGATGTTTACCTCGAGAATAGAGACGATGAAAAGCTGTTTATCCATGATACAATGTCACAGCCAACTACTCCGGCAAAGAGAGCAGCCCAACCCCAGAAGGAAGAAACACTGAAGGAGCTCTTGAACATGGAAATAAAAAAGAAACAAAAAAGAGGAGAAGGGAGCAAAGGGGCTTCCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03030 ko03420 ko03430 ko03440 ko03460 map03030 map03420 map03430 map03440 map03460

Pfam Domains

Protein Families

Helitron_like_N Herpes_Helicase PIF1 REPA_OB_2

Protein Analysis

1121

Amino Acids

127.77

Weight (kDa)

8.75

Isoelectric Point (pI)

41.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Helitron_like_N	PF14214	404 - 567	5.3e-48	Helitron helicase-like domain at N-terminus
DUF223	PF02721	655 - 756	1.1e-10	Domain of unknown function DUF223

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001547)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51690 AT3G51700 AT5G28780
fragaria_vesca	FvH4_1g12810 FvH4_1g15091 FvH4_1g22681 FvH4_3g02850 FvH4_3g10331 FvH4_5g26611 FvH4_6g21911
malus_domestica	MD09G1257400.v1.1 MD10G1239600.v1.1 MD16G1146300.v1.1
prunus_persica	Prupe.1G200900_v2.0.a1 Prupe.1G234700_v2.0.a1 Prupe.6G165800_v2.0.a1
pyrus_communis	pycom01g15480 pycom03g19960 pycom05g09080 pycom05g09090 pycom05g09100 pycom05g13700 pycom05g27440 pycom06g13860 pycom09g02530 pycom10g28970 pycom11g03190 pycom11g03450 pycom11g03460 pycom15g06510 pycom15g06520 pycom15g09120 pycom15g25220 pycom15g25230 pycom17g19080
rosa_chinensis	RchiOBHm_Chr5g0080791
rosa_multiflora	Rmu_sc0002236.1_g000014 Rmu_sc0004733.1_g000008
rosa_roxburghii	Rroxscaffold_1G00025650 Rroxscaffold_3G00267580
rosa_rugosa	Rorug06G0008800
rosa_samantha	Rh1CG246000 Rh2BG332000 Rh2CG319700 Rh2DG369300 Rh3BG308100 Rh4CG020600 Rh6DG047800
rosa_wichuraiana	Rw4G009260 Rw5G045770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	588, 1899, 2702
AasI	GACNNNNNNGTC	1 cut(s)	635
AatII	GACGTC	1 cut(s)	1831
Acc36I	ACCTGC	2 cut(s)	1256, 2737
AccB7I	CCANNNNNTGG	1 cut(s)	197
AccI	GTMKAC	1 cut(s)	2380
AccII	CGCG	4 cut(s)	496, 1162, 1236, 1350
AciI	CCGC	6 cut(s)	263, 295, 494, 1049, 1180, 3029
AclI	AACGTT	2 cut(s)	177, 2440
AclWI	GGATC	2 cut(s)	1774, 2910
AcoI	YGGCCR	1 cut(s)	2950
AcsI	RAATTY	7 cut(s)	563, 731, 913, 1085, 1847, 2186, 2510
AcuI	CTGAAG	4 cut(s)	336, 1626, 2405, 3311
AcyI	GRCGYC	2 cut(s)	1828, 1839
AdeI	CACNNNGTG	1 cut(s)	2490
AfaI	GTAC	8 cut(s)	168, 1013, 1159, 1823, 2174, 2216, 2617, 3092
AfiI	CCNNNNNNNGG	2 cut(s)	197, 716
AflIII	ACRYGT	3 cut(s)	831, 2618, 2879
AjiI	CACGTC	1 cut(s)	2720
AjnI	CCWGG	2 cut(s)	471, 2865
AjuI	GAANNNNNNNTTGG	2 cut(s)	184, 216
AleI	CACNNNNGTG	1 cut(s)	2597
Alw21I	GWGCWC	2 cut(s)	1816, 3300
Alw26I	GTCTC	3 cut(s)	992, 1358, 3195
AlwI	GGATC	2 cut(s)	1774, 2910
Ama87I	CYCGRG	2 cut(s)	964, 3191
AoxI	GGCC	6 cut(s)	478, 1516, 1559, 2556, 2950, 3154
ApeKI	GCWGC	5 cut(s)	292, 468, 1726, 3026, 3263
ApoI	RAATTY	7 cut(s)	563, 731, 913, 1085, 1847, 2186, 2510
ArsI	GACNNNNNNTTYG	8 cut(s)	1076, 1108, 1868, 1900, 2053, 2085, 3023, 3055
AspLEI	GCGC	5 cut(s)	406, 1164, 1236, 2239, 2583
AspS9I	GGNCC	3 cut(s)	653, 1517, 1787
AsuC2I	CCSGG	1 cut(s)	482
AsuHPI	GGTGA	8 cut(s)	30, 731, 1010, 1136, 1424, 1607, 3076, 3187
AvaI	CYCGRG	2 cut(s)	964, 3191
AvaII	GGWCC	2 cut(s)	653, 1787
BalI	TGGCCA	1 cut(s)	2952
BanII	GRGCYC	1 cut(s)	3300
BarI	GAAGNNNNNNTAC	2 cut(s)	3170, 3202
BbsI	GAAGAC	1 cut(s)	2006
Bbv12I	GWGCWC	2 cut(s)	1816, 3300
BbvCI	CCTCAGC	1 cut(s)	2298
BbvI	GCAGC	5 cut(s)	304, 455, 1713, 3038, 3275
BccI	CCATC	8 cut(s)	223, 638, 788, 1124, 1403, 1993, 2414, 2961
BcgI	CGANNNNNNTGC	2 cut(s)	1721, 1755
BciT130I	CCWGG	2 cut(s)	473, 2867
BciVI	GTATCC	3 cut(s)	330, 1113, 2406
BclI	TGATCA	2 cut(s)	52, 1800
BcnI	CCSGG	1 cut(s)	482
BcoDI	GTCTC	3 cut(s)	992, 1358, 3195
BfaI	CTAG	5 cut(s)	6, 533, 1443, 1455, 1809
BfmI	CTRYAG	1 cut(s)	2004
BfoI	RGCGCY	1 cut(s)	2584
BfuAI	ACCTGC	2 cut(s)	1256, 2737
BfuI	GTATCC	3 cut(s)	330, 1113, 2406
BglI	GCCNNNNNGGC	1 cut(s)	477
BisI	GCNGC	6 cut(s)	293, 469, 1050, 1727, 3027, 3264
BlpI	GCTNAGC	1 cut(s)	1722
BlsI	GCNGC	6 cut(s)	294, 470, 1051, 1728, 3028, 3265
Bme1390I	CCNGG	3 cut(s)	473, 482, 2867
Bme18I	GGWCC	2 cut(s)	653, 1787
BmeT110I	CYCGRG	2 cut(s)	964, 3191
BmgBI	CACGTC	1 cut(s)	2720
BmgT120I	GGNCC	3 cut(s)	653, 1517, 1787
BmrFI	CCNGG	3 cut(s)	473, 482, 2867
BmsI	GCATC	6 cut(s)	391, 905, 1285, 1375, 1480, 2513
BoxI	GACNNNNGTC	1 cut(s)	2802
BpiI	GAAGAC	1 cut(s)	2006
BpmI	CTGGAG	3 cut(s)	696, 1506, 2529
Bpu10I	CCTNAGC	1 cut(s)	2298
Bpu1102I	GCTNAGC	1 cut(s)	1722
BpuEI	CTTGAG	1 cut(s)	3002
BpuMI	CCSGG	1 cut(s)	482
Bsa29I	ATCGAT	2 cut(s)	868, 2418
BsaAI	YACGTR	3 cut(s)	23, 361, 419
BsaBI	GATNNNNATC	1 cut(s)	1134
BsaHI	GRCGYC	2 cut(s)	1828, 1839
BsaI	GGTCTC	1 cut(s)	992
BsaJI	CCNNGG	2 cut(s)	1783, 2866
BsaWI	WCCGGW	1 cut(s)	2175
BsaXI	ACNNNNNCTCC	6 cut(s)	609, 639, 1948, 1978, 2430, 2460
Bsc4I	CCNNNNNNNGG	2 cut(s)	197, 716
Bse1I	ACTGG	5 cut(s)	713, 859, 1099, 2406, 2546
Bse3DI	GCAATG	3 cut(s)	1577, 1698, 2081
Bse8I	GATNNNNATC	1 cut(s)	1134
BseBI	CCWGG	2 cut(s)	473, 2867
BseCI	ATCGAT	2 cut(s)	868, 2418
BseDI	CCNNGG	2 cut(s)	1783, 2866
BseGI	GGATG	8 cut(s)	234, 814, 1078, 2171, 2953, 2992, 3088, 3187
BseJI	GATNNNNATC	1 cut(s)	1134
BseLI	CCNNNNNNNGG	2 cut(s)	197, 716
BseMI	GCAATG	3 cut(s)	1577, 1698, 2081
BseMII	CTCAG	6 cut(s)	1554, 1713, 2276, 2312, 2637, 2908
BseNI	ACTGG	5 cut(s)	713, 859, 1099, 2406, 2546
BseRI	GAGGAG	2 cut(s)	75, 3348
BseXI	GCAGC	5 cut(s)	304, 455, 1713, 3038, 3275
BseYI	CCCAGC	2 cut(s)	511, 2635
BsgI	GTGCAG	2 cut(s)	311, 2700
Bsh1236I	CGCG	4 cut(s)	496, 1162, 1236, 1350
BshFI	GGCC	6 cut(s)	480, 1518, 1561, 2558, 2952, 3156
BshVI	ATCGAT	2 cut(s)	868, 2418
BsiHKAI	GWGCWC	2 cut(s)	1816, 3300
BsiHKCI	CYCGRG	2 cut(s)	964, 3191
BsiSI	CCGG	3 cut(s)	481, 2176, 3251
BslFI	GGGAC	2 cut(s)	947, 2790
BslI	CCNNNNNNNGG	2 cut(s)	197, 716
BsmAI	GTCTC	3 cut(s)	992, 1358, 3195
BsmBI	CGTCTC	1 cut(s)	3195
BsmFI	GGGAC	2 cut(s)	947, 2790
BsmI	GAATGC	2 cut(s)	1744, 2107
BsnI	GGCC	6 cut(s)	480, 1518, 1561, 2558, 2952, 3156
Bso31I	GGTCTC	1 cut(s)	992
BsoBI	CYCGRG	2 cut(s)	964, 3191
Bsp1286I	GDGCHC	2 cut(s)	1816, 3300
Bsp1407I	TGTACA	2 cut(s)	166, 1821
Bsp143I	GATC	8 cut(s)	52, 869, 1609, 1654, 1695, 1779, 1800, 2902
Bsp1720I	GCTNAGC	1 cut(s)	1722
Bsp19I	CCATGG	1 cut(s)	1783
BspACI	CCGC	6 cut(s)	263, 295, 494, 1049, 1180, 3029
BspANI	GGCC	6 cut(s)	480, 1518, 1561, 2558, 2952, 3156
BspCNI	CTCAG	6 cut(s)	1555, 1714, 2275, 2311, 2638, 2907
BspDI	ATCGAT	2 cut(s)	868, 2418
BspFNI	CGCG	4 cut(s)	496, 1162, 1236, 1350
BspHI	TCATGA	2 cut(s)	2722, 3055
BspMI	ACCTGC	2 cut(s)	1256, 2737
BspPI	GGATC	2 cut(s)	1774, 2910
BspTNI	GGTCTC	1 cut(s)	992
BsrDI	GCAATG	3 cut(s)	1577, 1698, 2081
BsrGI	TGTACA	2 cut(s)	166, 1821
BsrI	ACTGG	5 cut(s)	713, 859, 1099, 2406, 2546
BssECI	CCNNGG	2 cut(s)	1783, 2866
BssMI	GATC	8 cut(s)	52, 869, 1609, 1654, 1695, 1779, 1800, 2902
BssNI	GRCGYC	2 cut(s)	1828, 1839
BssT1I	CCWWGG	1 cut(s)	1783
Bst2UI	CCWGG	2 cut(s)	473, 2867
Bst4CI	ACNGT	3 cut(s)	637, 1045, 2359
Bst6I	CTCTTC	5 cut(s)	323, 879, 1118, 1308, 1421
BstACI	GRCGYC	2 cut(s)	1828, 1839
BstAPI	GCANNNNNTGC	1 cut(s)	2111
BstAUI	TGTACA	2 cut(s)	166, 1821
BstBAI	YACGTR	3 cut(s)	23, 361, 419
BstC8I	GCNNGC	4 cut(s)	498, 786, 1575, 2784
BstDEI	CTNAG	8 cut(s)	1563, 1722, 2262, 2298, 2646, 2826, 2894, 3158
BstDSI	CCRYGG	1 cut(s)	1783
BstENI	CCTNNNNNAGG	1 cut(s)	714
BstF5I	GGATG	8 cut(s)	234, 814, 1078, 2171, 2953, 2992, 3088, 3187
BstFNI	CGCG	4 cut(s)	496, 1162, 1236, 1350
BstH2I	RGCGCY	1 cut(s)	2584
BstHHI	GCGC	5 cut(s)	406, 1164, 1236, 2239, 2583
BstKTI	GATC	8 cut(s)	55, 872, 1612, 1657, 1698, 1782, 1803, 2905
BstMAI	GTCTC	3 cut(s)	992, 1358, 3195
BstMBI	GATC	8 cut(s)	52, 869, 1609, 1654, 1695, 1779, 1800, 2902
BstMWI	GCNNNNNNNGC	6 cut(s)	477, 1579, 2111, 2284, 2338, 3260
BstNI	CCWGG	2 cut(s)	473, 2867
BstNSI	RCATGY	4 cut(s)	835, 2622, 2883, 3054
BstPAI	GACNNNNGTC	1 cut(s)	2802
BstSCI	CCNGG	3 cut(s)	471, 480, 2865
BstSFI	CTRYAG	1 cut(s)	2004
BstSNI	TACGTA	1 cut(s)	361
BstUI	CGCG	4 cut(s)	496, 1162, 1236, 1350
BstV1I	GCAGC	5 cut(s)	304, 455, 1713, 3038, 3275
BstV2I	GAAGAC	1 cut(s)	2006
Bsu15I	ATCGAT	2 cut(s)	868, 2418
BsuI	GTATCC	3 cut(s)	330, 1113, 2406
BsuRI	GGCC	6 cut(s)	480, 1518, 1561, 2558, 2952, 3156
BsuTUI	ATCGAT	2 cut(s)	868, 2418
BtgI	CCRYGG	1 cut(s)	1783
BtrI	CACGTC	1 cut(s)	2720
BtsCI	GGATG	8 cut(s)	234, 814, 1078, 2171, 2953, 2992, 3088, 3187
BtsIMutI	CAGTG	4 cut(s)	1041, 2399, 2432, 3287
BveI	ACCTGC	2 cut(s)	1256, 2737
Cac8I	GCNNGC	4 cut(s)	498, 786, 1575, 2784
CciI	TCATGA	2 cut(s)	2722, 3055
CfoI	GCGC	5 cut(s)	406, 1164, 1236, 2239, 2583
Cfr13I	GGNCC	3 cut(s)	653, 1517, 1787
ClaI	ATCGAT	2 cut(s)	868, 2418
CseI	GACGC	5 cut(s)	287, 545, 902, 1847, 2468
Csp6I	GTAC	8 cut(s)	167, 1012, 1158, 1822, 2173, 2215, 2616, 3091
CspCI	CAANNNNNGTGG	4 cut(s)	124, 159, 655, 690
CviQI	GTAC	8 cut(s)	167, 1012, 1158, 1822, 2173, 2215, 2616, 3091
DdeI	CTNAG	8 cut(s)	1563, 1722, 2262, 2298, 2646, 2826, 2894, 3158
DpnI	GATC	8 cut(s)	54, 871, 1611, 1656, 1697, 1781, 1802, 2904
DpnII	GATC	8 cut(s)	52, 869, 1609, 1654, 1695, 1779, 1800, 2902
DraI	TTTAAA	1 cut(s)	1846
DraIII	CACNNNGTG	1 cut(s)	2490
DrdI	GACNNNNNNGTC	1 cut(s)	635
DseDI	GACNNNNNNGTC	1 cut(s)	635
EaeI	YGGCCR	1 cut(s)	2950
Eam1104I	CTCTTC	5 cut(s)	323, 879, 1118, 1308, 1421
EarI	CTCTTC	5 cut(s)	323, 879, 1118, 1308, 1421
Ecl136II	GAGCTC	1 cut(s)	3298
Eco105I	TACGTA	1 cut(s)	361
Eco130I	CCWWGG	1 cut(s)	1783
Eco24I	GRGCYC	1 cut(s)	3300
Eco31I	GGTCTC	1 cut(s)	992
Eco32I	GATATC	1 cut(s)	2181
Eco47I	GGWCC	2 cut(s)	653, 1787
Eco53kI	GAGCTC	1 cut(s)	3298
Eco57I	CTGAAG	4 cut(s)	336, 1626, 2405, 3311
Eco88I	CYCGRG	2 cut(s)	964, 3191
EcoICRI	GAGCTC	1 cut(s)	3298
EcoNI	CCTNNNNNAGG	1 cut(s)	714
EcoRII	CCWGG	2 cut(s)	471, 2865
EcoRV	GATATC	1 cut(s)	2181
EcoT14I	CCWWGG	1 cut(s)	1783
EcoT22I	ATGCAT	1 cut(s)	1300
EcoT38I	GRGCYC	1 cut(s)	3300
ErhI	CCWWGG	1 cut(s)	1783
Esp3I	CGTCTC	1 cut(s)	3195
FalI	AAGNNNNNCTT	4 cut(s)	100, 132, 3284, 3316
FaqI	GGGAC	2 cut(s)	947, 2790
FauI	CCCGC	1 cut(s)	288
FauNDI	CATATG	2 cut(s)	1300, 2337
FbaI	TGATCA	2 cut(s)	52, 1800
FblI	GTMKAC	1 cut(s)	2380
Fnu4HI	GCNGC	6 cut(s)	293, 469, 1050, 1727, 3027, 3264
FokI	GGATG	8 cut(s)	241, 821, 1065, 2178, 2940, 2999, 3095, 3194
FriOI	GRGCYC	1 cut(s)	3300
Fsp4HI	GCNGC	6 cut(s)	293, 469, 1050, 1727, 3027, 3264
FspBI	CTAG	5 cut(s)	6, 533, 1443, 1455, 1809
GlaI	GCGC	5 cut(s)	405, 1163, 1235, 2238, 2582
GluI	GCNGC	6 cut(s)	293, 469, 1050, 1727, 3027, 3264
GsaI	CCCAGC	2 cut(s)	515, 2639
GsuI	CTGGAG	3 cut(s)	696, 1506, 2529
HaeII	RGCGCY	1 cut(s)	2584
HaeIII	GGCC	6 cut(s)	480, 1518, 1561, 2558, 2952, 3156
HapII	CCGG	3 cut(s)	481, 2176, 3251
HgaI	GACGC	5 cut(s)	287, 545, 902, 1847, 2468
HhaI	GCGC	5 cut(s)	406, 1164, 1236, 2239, 2583
Hin1I	GRCGYC	2 cut(s)	1828, 1839
Hin6I	GCGC	5 cut(s)	404, 1162, 1234, 2237, 2581
HinP1I	GCGC	5 cut(s)	404, 1162, 1234, 2237, 2581
HincII	GTYRAC	5 cut(s)	61, 449, 1876, 2089, 2381
HindII	GTYRAC	5 cut(s)	61, 449, 1876, 2089, 2381
HindIII	AAGCTT	2 cut(s)	2330, 2918
HpaII	CCGG	3 cut(s)	481, 2176, 3251
HphI	GGTGA	8 cut(s)	30, 731, 1010, 1136, 1424, 1607, 3076, 3187
Hpy188I	TCNGA	7 cut(s)	52, 324, 488, 879, 1990, 2364, 2509
Hpy99I	CGWCG	2 cut(s)	281, 1833
HpyAV	CCTTC	9 cut(s)	327, 470, 2060, 2569, 3109, 3172, 3271, 3286, 3332
HpyCH4III	ACNGT	3 cut(s)	637, 1045, 2359
HpyCH4IV	ACGT	7 cut(s)	22, 177, 360, 418, 1828, 2440, 2719
HpyF10VI	GCNNNNNNNGC	6 cut(s)	477, 1579, 2111, 2284, 2338, 3260
HpyF3I	CTNAG	8 cut(s)	1563, 1722, 2262, 2298, 2646, 2826, 2894, 3158
HpySE526I	ACGT	7 cut(s)	22, 177, 360, 418, 1828, 2440, 2719
Hsp92I	GRCGYC	2 cut(s)	1828, 1839
HspAI	GCGC	5 cut(s)	404, 1162, 1234, 2237, 2581
Ksp22I	TGATCA	2 cut(s)	52, 1800
Kzo9I	GATC	8 cut(s)	52, 869, 1609, 1654, 1695, 1779, 1800, 2902
LmnI	GCTCC	5 cut(s)	617, 2695, 2737, 3295, 3342
Lsp1109I	GCAGC	5 cut(s)	304, 455, 1713, 3038, 3275
LweI	GCATC	6 cut(s)	391, 905, 1285, 1375, 1480, 2513
MaeI	CTAG	5 cut(s)	6, 533, 1443, 1455, 1809
MaeII	ACGT	7 cut(s)	22, 177, 360, 418, 1828, 2440, 2719
MaeIII	GTNAC	4 cut(s)	79, 414, 1595, 3234
MalI	GATC	8 cut(s)	54, 871, 1611, 1656, 1697, 1781, 1802, 2904
MboI	GATC	8 cut(s)	52, 869, 1609, 1654, 1695, 1779, 1800, 2902
MfeI	CAATTG	2 cut(s)	170, 740
MhlI	GDGCHC	2 cut(s)	1816, 3300
MlsI	TGGCCA	1 cut(s)	2952
MluNI	TGGCCA	1 cut(s)	2952
MlyI	GAGTC	6 cut(s)	76, 431, 1468, 2254, 2812, 2884
MmeI	TCCRAC	2 cut(s)	214, 2880
Mox20I	TGGCCA	1 cut(s)	2952
Mph1103I	ATGCAT	1 cut(s)	1300
MscI	TGGCCA	1 cut(s)	2952
MseI	TTAA	9 cut(s)	126, 300, 1394, 1671, 1845, 1916, 2045, 2250, 2631
MslI	CAYNNNNRTG	7 cut(s)	144, 935, 1407, 1485, 2222, 2340, 2597
Msp20I	TGGCCA	1 cut(s)	2952
MspA1I	CMGCKG	3 cut(s)	263, 295, 3029
MspI	CCGG	3 cut(s)	481, 2176, 3251
MspR9I	CCNGG	3 cut(s)	473, 482, 2867
MunI	CAATTG	2 cut(s)	170, 740
Mva1269I	GAATGC	2 cut(s)	1744, 2107
MvaI	CCWGG	2 cut(s)	473, 2867
MvnI	CGCG	4 cut(s)	496, 1162, 1236, 1350
MwoI	GCNNNNNNNGC	6 cut(s)	477, 1579, 2111, 2284, 2338, 3260
NciI	CCSGG	1 cut(s)	482
NcoI	CCATGG	1 cut(s)	1783
NdeI	CATATG	2 cut(s)	1300, 2337
NdeII	GATC	8 cut(s)	52, 869, 1609, 1654, 1695, 1779, 1800, 2902
NmuCI	GTSAC	3 cut(s)	79, 1595, 3234
NsiI	ATGCAT	1 cut(s)	1300
NspI	RCATGY	4 cut(s)	835, 2622, 2883, 3054
OliI	CACNNNNGTG	1 cut(s)	2597
PaeR7I	CTCGAG	1 cut(s)	3191
PagI	TCATGA	2 cut(s)	2722, 3055
PciI	ACATGT	3 cut(s)	831, 2618, 2879
PcsI	WCGNNNNNNNCGW	2 cut(s)	19, 2020
PctI	GAATGC	2 cut(s)	1744, 2107
PfeI	GAWTC	8 cut(s)	113, 273, 706, 1244, 1706, 2201, 2996, 3124
PflMI	CCANNNNNTGG	1 cut(s)	197
PkrI	GCNGC	6 cut(s)	294, 470, 1051, 1728, 3028, 3265
PleI	GAGTC	6 cut(s)	76, 430, 1467, 2254, 2811, 2884
PpsI	GAGTC	6 cut(s)	76, 430, 1467, 2254, 2811, 2884
Ppu21I	YACGTR	3 cut(s)	23, 361, 419
PscI	ACATGT	3 cut(s)	831, 2618, 2879
PshAI	GACNNNNGTC	1 cut(s)	2802
PsiI	TTATAA	3 cut(s)	588, 1899, 2702
Psp124BI	GAGCTC	1 cut(s)	3300
Psp1406I	AACGTT	2 cut(s)	177, 2440
Psp6I	CCWGG	2 cut(s)	471, 2865
PspFI	CCCAGC	2 cut(s)	511, 2635
PspGI	CCWGG	2 cut(s)	471, 2865
PspPI	GGNCC	3 cut(s)	653, 1517, 1787
PsrI	GAACNNNNNNTAC	2 cut(s)	241, 273
RsaI	GTAC	8 cut(s)	168, 1013, 1159, 1823, 2174, 2216, 2617, 3092
RsaNI	GTAC	8 cut(s)	167, 1012, 1158, 1822, 2173, 2215, 2616, 3091
RseI	CAYNNNNRTG	7 cut(s)	144, 935, 1407, 1485, 2222, 2340, 2597
SacI	GAGCTC	1 cut(s)	3300
SalI	GTCGAC	1 cut(s)	2379
SaqAI	TTAA	9 cut(s)	126, 300, 1394, 1671, 1845, 1916, 2045, 2250, 2631
SatI	GCNGC	6 cut(s)	293, 469, 1050, 1727, 3027, 3264
Sau3AI	GATC	8 cut(s)	52, 869, 1609, 1654, 1695, 1779, 1800, 2902
Sau96I	GGNCC	3 cut(s)	653, 1517, 1787
SchI	GAGTC	6 cut(s)	76, 431, 1468, 2254, 2812, 2884
ScrFI	CCNGG	3 cut(s)	473, 482, 2867
SduI	GDGCHC	2 cut(s)	1816, 3300
SfaNI	GCATC	6 cut(s)	391, 905, 1285, 1375, 1480, 2513
SfcI	CTRYAG	1 cut(s)	2004
Sfr274I	CTCGAG	1 cut(s)	3191
SinI	GGWCC	2 cut(s)	653, 1787
SlaI	CTCGAG	1 cut(s)	3191
SmiMI	CAYNNNNRTG	7 cut(s)	144, 935, 1407, 1485, 2222, 2340, 2597
SmlI	CTYRAG	2 cut(s)	2981, 3191
SmoI	CTYRAG	2 cut(s)	2981, 3191
SnaBI	TACGTA	1 cut(s)	361
SsiI	CCGC	6 cut(s)	263, 295, 494, 1049, 1180, 3029
SspI	AATATT	1 cut(s)	2043
SspMI	CTAG	5 cut(s)	6, 533, 1443, 1455, 1809
SstI	GAGCTC	1 cut(s)	3300
StyD4I	CCNGG	3 cut(s)	471, 480, 2865
StyI	CCWWGG	1 cut(s)	1783
TaaI	ACNGT	3 cut(s)	637, 1045, 2359
TaiI	ACGT	7 cut(s)	25, 180, 363, 421, 1831, 2443, 2722
TatI	WGTACW	5 cut(s)	166, 1821, 2214, 2615, 3090
TauI	GCSGC	1 cut(s)	1052
TfiI	GAWTC	8 cut(s)	113, 273, 706, 1244, 1706, 2201, 2996, 3124
Tru1I	TTAA	9 cut(s)	126, 300, 1394, 1671, 1845, 1916, 2045, 2250, 2631
Tru9I	TTAA	9 cut(s)	126, 300, 1394, 1671, 1845, 1916, 2045, 2250, 2631
TscAI	CASTG	4 cut(s)	1048, 2406, 2439, 3294
TseFI	GTSAC	3 cut(s)	79, 1595, 3234
TseI	GCWGC	5 cut(s)	292, 468, 1726, 3026, 3263
Tsp45I	GTSAC	3 cut(s)	79, 1595, 3234
TspRI	CASTG	4 cut(s)	1048, 2406, 2439, 3294
Van91I	CCANNNNNTGG	1 cut(s)	197
VpaK11BI	GGWCC	2 cut(s)	653, 1787
XagI	CCTNNNNNAGG	1 cut(s)	714
XapI	RAATTY	7 cut(s)	563, 731, 913, 1085, 1847, 2186, 2510
XceI	RCATGY	4 cut(s)	835, 2622, 2883, 3054
XcmI	CCANNNNNNNNNTGG	3 cut(s)	796, 1790, 2965
XhoI	CTCGAG	1 cut(s)	3191
XmiI	GTMKAC	1 cut(s)	2380
XspI	CTAG	5 cut(s)	6, 533, 1443, 1455, 1809
ZraI	GACGTC	1 cut(s)	1829
Zsp2I	ATGCAT	1 cut(s)	1300

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.