Belongs to the helicase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G51690 AT3G51700 AT5G28780 |
| fragaria_vesca | FvH4_1g12810 FvH4_1g15091 FvH4_1g22681 FvH4_3g02850 FvH4_3g10331 FvH4_5g26611 FvH4_6g21911 |
| malus_domestica | MD09G1257400.v1.1 MD10G1239600.v1.1 MD16G1146300.v1.1 |
| prunus_persica | Prupe.1G200900_v2.0.a1 Prupe.1G234700_v2.0.a1 Prupe.6G165800_v2.0.a1 |
| pyrus_communis | pycom01g15480 pycom03g19960 pycom05g09080 pycom05g09090 pycom05g09100 pycom05g13700 pycom05g27440 pycom06g13860 pycom09g02530 pycom10g28970 pycom11g03190 pycom11g03450 pycom11g03460 pycom15g06510 pycom15g06520 pycom15g09120 pycom15g25220 pycom15g25230 pycom17g19080 |
| rosa_chinensis | RchiOBHm_Chr5g0080791 |
| rosa_multiflora | Rmu_sc0002236.1_g000014 Rmu_sc0004733.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00025650 Rroxscaffold_3G00267580 |
| rosa_rugosa | Rorug06G0008800 |
| rosa_samantha | Rh1CG246000 Rh2BG332000 Rh2CG319700 Rh2DG369300 Rh3BG308100 Rh4CG020600 Rh6DG047800 |
| rosa_wichuraiana | Rw4G009260 Rw5G045770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 555 |
| AccB1I | GGYRCC | 1 cut(s) | 555 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 608 |
| AccI | GTMKAC | 1 cut(s) | 337 |
| AclWI | GGATC | 1 cut(s) | 26 |
| AcoI | YGGCCR | 1 cut(s) | 427 |
| AcsI | RAATTY | 3 cut(s) | 134, 583, 646 |
| AfaI | GTAC | 3 cut(s) | 347, 372, 557 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 119, 608 |
| AgsI | TTSAA | 3 cut(s) | 15, 281, 651 |
| AjnI | CCWGG | 1 cut(s) | 296 |
| AluBI | AGCT | 1 cut(s) | 145 |
| AluI | AGCT | 1 cut(s) | 145 |
| Alw21I | GWGCWC | 1 cut(s) | 355 |
| Alw44I | GTGCAC | 1 cut(s) | 351 |
| AlwI | GGATC | 1 cut(s) | 26 |
| AoxI | GGCC | 4 cut(s) | 21, 241, 427, 475 |
| ApaLI | GTGCAC | 1 cut(s) | 351 |
| ApoI | RAATTY | 3 cut(s) | 134, 583, 646 |
| AseI | ATTAAT | 1 cut(s) | 75 |
| Asp718I | GGTACC | 1 cut(s) | 555 |
| AspS9I | GGNCC | 3 cut(s) | 21, 56, 318 |
| AsuII | TTCGAA | 1 cut(s) | 194 |
| AvaII | GGWCC | 2 cut(s) | 56, 318 |
| BaeGI | GKGCMC | 1 cut(s) | 355 |
| BalI | TGGCCA | 1 cut(s) | 429 |
| BanI | GGYRCC | 1 cut(s) | 555 |
| BbsI | GAAGAC | 1 cut(s) | 560 |
| Bbv12I | GWGCWC | 1 cut(s) | 355 |
| BccI | CCATC | 4 cut(s) | 43, 91, 467, 545 |
| BciT130I | CCWGG | 1 cut(s) | 298 |
| BfaI | CTAG | 1 cut(s) | 257 |
| Bme1390I | CCNGG | 1 cut(s) | 298 |
| Bme18I | GGWCC | 2 cut(s) | 56, 318 |
| BmgT120I | GGNCC | 3 cut(s) | 21, 56, 318 |
| BmiI | GGNNCC | 2 cut(s) | 22, 557 |
| BmrFI | CCNGG | 1 cut(s) | 298 |
| BmrI | ACTGGG | 1 cut(s) | 618 |
| BmsI | GCATC | 2 cut(s) | 97, 218 |
| BmuI | ACTGGG | 1 cut(s) | 618 |
| BpiI | GAAGAC | 1 cut(s) | 560 |
| BpmI | CTGGAG | 1 cut(s) | 99 |
| Bpu14I | TTCGAA | 1 cut(s) | 194 |
| Bsa29I | ATCGAT | 1 cut(s) | 38 |
| BsaJI | CCNNGG | 2 cut(s) | 297, 572 |
| BsaWI | WCCGGW | 1 cut(s) | 558 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 119, 608 |
| Bse1I | ACTGG | 1 cut(s) | 613 |
| BseBI | CCWGG | 1 cut(s) | 298 |
| BseCI | ATCGAT | 1 cut(s) | 38 |
| BseDI | CCNNGG | 2 cut(s) | 297, 572 |
| BseGI | GGATG | 1 cut(s) | 499 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 119, 608 |
| BseNI | ACTGG | 1 cut(s) | 613 |
| BseSI | GKGCMC | 1 cut(s) | 355 |
| BshFI | GGCC | 4 cut(s) | 23, 243, 429, 477 |
| BshNI | GGYRCC | 1 cut(s) | 555 |
| BshVI | ATCGAT | 1 cut(s) | 38 |
| BsiHKAI | GWGCWC | 1 cut(s) | 355 |
| BsiSI | CCGG | 1 cut(s) | 559 |
| BslFI | GGGAC | 1 cut(s) | 434 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 119, 608 |
| BsmFI | GGGAC | 1 cut(s) | 434 |
| BsnI | GGCC | 4 cut(s) | 23, 243, 429, 477 |
| Bsp119I | TTCGAA | 1 cut(s) | 194 |
| Bsp1286I | GDGCHC | 1 cut(s) | 355 |
| Bsp1407I | TGTACA | 1 cut(s) | 370 |
| Bsp143I | GATC | 4 cut(s) | 31, 39, 200, 223 |
| BspANI | GGCC | 4 cut(s) | 23, 243, 429, 477 |
| BspDI | ATCGAT | 1 cut(s) | 38 |
| BspLI | GGNNCC | 2 cut(s) | 22, 557 |
| BspPI | GGATC | 1 cut(s) | 26 |
| BspT104I | TTCGAA | 1 cut(s) | 194 |
| BspT107I | GGYRCC | 1 cut(s) | 555 |
| BsrGI | TGTACA | 1 cut(s) | 370 |
| BsrI | ACTGG | 1 cut(s) | 613 |
| BssECI | CCNNGG | 2 cut(s) | 297, 572 |
| BssMI | GATC | 4 cut(s) | 31, 39, 200, 223 |
| BssT1I | CCWWGG | 1 cut(s) | 572 |
| Bst2UI | CCWGG | 1 cut(s) | 298 |
| Bst4CI | ACNGT | 2 cut(s) | 350, 545 |
| Bst6I | CTCTTC | 1 cut(s) | 534 |
| BstAUI | TGTACA | 1 cut(s) | 370 |
| BstBI | TTCGAA | 1 cut(s) | 194 |
| BstC8I | GCNNGC | 2 cut(s) | 294, 387 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 117 |
| BstF5I | GGATG | 1 cut(s) | 499 |
| BstKTI | GATC | 4 cut(s) | 34, 42, 203, 226 |
| BstMBI | GATC | 4 cut(s) | 31, 39, 200, 223 |
| BstNI | CCWGG | 1 cut(s) | 298 |
| BstNSI | RCATGY | 1 cut(s) | 393 |
| BstSCI | CCNGG | 1 cut(s) | 296 |
| BstSLI | GKGCMC | 1 cut(s) | 355 |
| BstV2I | GAAGAC | 1 cut(s) | 560 |
| Bsu15I | ATCGAT | 1 cut(s) | 38 |
| BsuRI | GGCC | 4 cut(s) | 23, 243, 429, 477 |
| BsuTUI | ATCGAT | 1 cut(s) | 38 |
| BtsCI | GGATG | 1 cut(s) | 499 |
| Cac8I | GCNNGC | 2 cut(s) | 294, 387 |
| Cfr13I | GGNCC | 3 cut(s) | 21, 56, 318 |
| ClaI | ATCGAT | 1 cut(s) | 38 |
| Csp6I | GTAC | 3 cut(s) | 346, 371, 556 |
| CviAII | CATG | 3 cut(s) | 365, 390, 511 |
| CviJI | RGCY | 8 cut(s) | 23, 145, 243, 296, 408, 429, 477, 515 |
| CviKI_1 | RGCY | 8 cut(s) | 23, 145, 243, 296, 408, 429, 477, 515 |
| CviQI | GTAC | 3 cut(s) | 346, 371, 556 |
| DpnI | GATC | 4 cut(s) | 33, 41, 202, 225 |
| DpnII | GATC | 4 cut(s) | 31, 39, 200, 223 |
| DraI | TTTAAA | 1 cut(s) | 70 |
| EaeI | YGGCCR | 1 cut(s) | 427 |
| Eam1104I | CTCTTC | 1 cut(s) | 534 |
| EarI | CTCTTC | 1 cut(s) | 534 |
| Eco130I | CCWWGG | 1 cut(s) | 572 |
| Eco47I | GGWCC | 2 cut(s) | 56, 318 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 117 |
| EcoRII | CCWGG | 1 cut(s) | 296 |
| EcoT14I | CCWWGG | 1 cut(s) | 572 |
| ErhI | CCWWGG | 1 cut(s) | 572 |
| FaeI | CATG | 3 cut(s) | 368, 393, 514 |
| FaiI | YATR | 8 cut(s) | 61, 63, 156, 366, 391, 465, 512, 541 |
| FaqI | GGGAC | 1 cut(s) | 434 |
| FatI | CATG | 3 cut(s) | 364, 389, 510 |
| FauNDI | CATATG | 1 cut(s) | 61 |
| FblI | GTMKAC | 1 cut(s) | 337 |
| FokI | GGATG | 1 cut(s) | 486 |
| FspBI | CTAG | 1 cut(s) | 257 |
| GsuI | CTGGAG | 1 cut(s) | 99 |
| HaeIII | GGCC | 4 cut(s) | 23, 243, 429, 477 |
| HapII | CCGG | 1 cut(s) | 559 |
| Hin1II | CATG | 3 cut(s) | 368, 393, 514 |
| HinfI | GANTC | 2 cut(s) | 486, 577 |
| HpaII | CCGG | 1 cut(s) | 559 |
| Hpy166II | GTNNAC | 3 cut(s) | 321, 338, 353 |
| Hpy188I | TCNGA | 2 cut(s) | 205, 214 |
| Hpy188III | TCNNGA | 3 cut(s) | 116, 548, 651 |
| Hpy8I | GTNNAC | 3 cut(s) | 321, 338, 353 |
| HpyAV | CCTTC | 1 cut(s) | 113 |
| HpyCH4III | ACNGT | 2 cut(s) | 350, 545 |
| HpyCH4IV | ACGT | 2 cut(s) | 334, 340 |
| HpyCH4V | TGCA | 3 cut(s) | 88, 140, 353 |
| HpySE526I | ACGT | 2 cut(s) | 334, 340 |
| Hsp92II | CATG | 3 cut(s) | 368, 393, 514 |
| KpnI | GGTACC | 1 cut(s) | 559 |
| Kzo9I | GATC | 4 cut(s) | 31, 39, 200, 223 |
| LmnI | GCTCC | 1 cut(s) | 460 |
| LpnPI | CCDG | 6 cut(s) | 129, 283, 310, 399, 572, 594 |
| LweI | GCATC | 2 cut(s) | 97, 218 |
| MaeI | CTAG | 1 cut(s) | 257 |
| MaeII | ACGT | 2 cut(s) | 334, 340 |
| MaeIII | GTNAC | 3 cut(s) | 359, 392, 495 |
| MalI | GATC | 4 cut(s) | 33, 41, 202, 225 |
| MboI | GATC | 4 cut(s) | 31, 39, 200, 223 |
| MboII | GAAGA | 2 cut(s) | 521, 560 |
| MhlI | GDGCHC | 1 cut(s) | 355 |
| MlsI | TGGCCA | 1 cut(s) | 429 |
| MluCI | AATT | 8 cut(s) | 72, 134, 306, 328, 379, 431, 583, 646 |
| MluNI | TGGCCA | 1 cut(s) | 429 |
| MnlI | CCTC | 6 cut(s) | 47, 123, 254, 265, 488, 537 |
| Mox20I | TGGCCA | 1 cut(s) | 429 |
| MscI | TGGCCA | 1 cut(s) | 429 |
| MseI | TTAA | 5 cut(s) | 8, 69, 75, 249, 410 |
| MslI | CAYNNNNRTG | 1 cut(s) | 251 |
| Msp20I | TGGCCA | 1 cut(s) | 429 |
| MspI | CCGG | 1 cut(s) | 559 |
| MspR9I | CCNGG | 1 cut(s) | 298 |
| MvaI | CCWGG | 1 cut(s) | 298 |
| NdeI | CATATG | 1 cut(s) | 61 |
| NdeII | GATC | 4 cut(s) | 31, 39, 200, 223 |
| NlaIII | CATG | 3 cut(s) | 368, 393, 514 |
| NlaIV | GGNNCC | 2 cut(s) | 22, 557 |
| NmuCI | GTSAC | 1 cut(s) | 392 |
| NspI | RCATGY | 1 cut(s) | 393 |
| NspV | TTCGAA | 1 cut(s) | 194 |
| PfeI | GAWTC | 2 cut(s) | 486, 577 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 608 |
| PshBI | ATTAAT | 1 cut(s) | 75 |
| Psp6I | CCWGG | 1 cut(s) | 296 |
| PspGI | CCWGG | 1 cut(s) | 296 |
| PspN4I | GGNNCC | 2 cut(s) | 22, 557 |
| PspPI | GGNCC | 3 cut(s) | 21, 56, 318 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 175, 207 |
| RsaI | GTAC | 3 cut(s) | 347, 372, 557 |
| RsaNI | GTAC | 3 cut(s) | 346, 371, 556 |
| RseI | CAYNNNNRTG | 1 cut(s) | 251 |
| SaqAI | TTAA | 5 cut(s) | 8, 69, 75, 249, 410 |
| Sau3AI | GATC | 4 cut(s) | 31, 39, 200, 223 |
| Sau96I | GGNCC | 3 cut(s) | 21, 56, 318 |
| ScrFI | CCNGG | 1 cut(s) | 298 |
| SduI | GDGCHC | 1 cut(s) | 355 |
| SfaNI | GCATC | 2 cut(s) | 97, 218 |
| SfuI | TTCGAA | 1 cut(s) | 194 |
| SinI | GGWCC | 2 cut(s) | 56, 318 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 251 |
| Sse9I | AATT | 8 cut(s) | 72, 134, 306, 328, 379, 431, 583, 646 |
| SspMI | CTAG | 1 cut(s) | 257 |
| StyD4I | CCNGG | 1 cut(s) | 296 |
| StyI | CCWWGG | 1 cut(s) | 572 |
| TaaI | ACNGT | 2 cut(s) | 350, 545 |
| TaiI | ACGT | 2 cut(s) | 337, 343 |
| TaqI | TCGA | 4 cut(s) | 38, 52, 194, 222 |
| TasI | AATT | 8 cut(s) | 72, 134, 306, 328, 379, 431, 583, 646 |
| TatI | WGTACW | 1 cut(s) | 370 |
| TfiI | GAWTC | 2 cut(s) | 486, 577 |
| Tru1I | TTAA | 5 cut(s) | 8, 69, 75, 249, 410 |
| Tru9I | TTAA | 5 cut(s) | 8, 69, 75, 249, 410 |
| TseFI | GTSAC | 1 cut(s) | 392 |
| Tsp45I | GTSAC | 1 cut(s) | 392 |
| TspDTI | ATGAA | 2 cut(s) | 183, 327 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 608 |
| VneI | GTGCAC | 1 cut(s) | 351 |
| VpaK11BI | GGWCC | 2 cut(s) | 56, 318 |
| VspI | ATTAAT | 1 cut(s) | 75 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 117 |
| XapI | RAATTY | 3 cut(s) | 134, 583, 646 |
| XceI | RCATGY | 1 cut(s) | 393 |
| XmiI | GTMKAC | 1 cut(s) | 337 |
| XspI | CTAG | 1 cut(s) | 257 |