Belongs to the helicase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G51690 AT3G51700 AT5G28780 |
| fragaria_vesca | FvH4_1g12810 FvH4_1g15091 FvH4_1g22681 FvH4_3g02850 FvH4_3g10331 FvH4_5g26611 FvH4_6g21911 |
| malus_domestica | MD09G1257400.v1.1 MD10G1239600.v1.1 MD16G1146300.v1.1 |
| prunus_persica | Prupe.1G200900_v2.0.a1 Prupe.1G234700_v2.0.a1 Prupe.6G165800_v2.0.a1 |
| pyrus_communis | pycom01g15480 pycom03g19960 pycom05g09080 pycom05g09090 pycom05g09100 pycom05g13700 pycom05g27440 pycom06g13860 pycom09g02530 pycom10g28970 pycom11g03190 pycom11g03450 pycom11g03460 pycom15g06510 pycom15g06520 pycom15g09120 pycom15g25220 pycom15g25230 pycom17g19080 |
| rosa_chinensis | RchiOBHm_Chr5g0080791 |
| rosa_multiflora | Rmu_sc0002236.1_g000014 Rmu_sc0004733.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00025650 Rroxscaffold_3G00267580 |
| rosa_rugosa | Rorug06G0008800 |
| rosa_samantha | Rh1CG246000 Rh2BG332000 Rh2CG319700 Rh2DG369300 Rh3BG308100 Rh4CG020600 Rh6DG047800 |
| rosa_wichuraiana | Rw4G009260 Rw5G045770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 6 cut(s) | 615, 1227, 1368, 1871, 2192, 3128 |
| AarI | CACCTGC | 2 cut(s) | 62, 4626 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2172 |
| Acc36I | ACCTGC | 2 cut(s) | 62, 4626 |
| AccB1I | GGYRCC | 1 cut(s) | 532 |
| AccI | GTMKAC | 2 cut(s) | 775, 3471 |
| AciI | CCGC | 8 cut(s) | 134, 237, 275, 353, 853, 1427, 2457, 3894 |
| AclI | AACGTT | 1 cut(s) | 4041 |
| AcuI | CTGAAG | 5 cut(s) | 2700, 3138, 3609, 4383, 4464 |
| AcyI | GRCGYC | 3 cut(s) | 533, 2572, 4726 |
| AdeI | CACNNNGTG | 1 cut(s) | 1196 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 755, 1184, 1355, 1423, 1823, 1919, 2966, 3872 |
| AflII | CTTAAG | 1 cut(s) | 4855 |
| AflIII | ACRYGT | 2 cut(s) | 1625, 3846 |
| AgeI | ACCGGT | 2 cut(s) | 3926, 4590 |
| AjiI | CACGTC | 2 cut(s) | 3849, 4271 |
| AjnI | CCWGG | 3 cut(s) | 295, 2248, 3643 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2427, 2459 |
| Alw21I | GWGCWC | 3 cut(s) | 982, 1203, 2105 |
| Alw26I | GTCTC | 6 cut(s) | 98, 1858, 3822, 3855, 4407, 4776 |
| Alw44I | GTGCAC | 1 cut(s) | 978 |
| AoxI | GGCC | 8 cut(s) | 33, 387, 984, 2216, 3980, 4110, 4351, 4712 |
| ApaLI | GTGCAC | 1 cut(s) | 978 |
| ApeKI | GCWGC | 7 cut(s) | 60, 278, 605, 926, 3026, 4517, 4787 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1733, 1765, 3847, 3879 |
| AsiGI | ACCGGT | 2 cut(s) | 3926, 4590 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2500, 3628 |
| AspLEI | GCGC | 3 cut(s) | 160, 535, 4522 |
| AspS9I | GGNCC | 5 cut(s) | 137, 1187, 1292, 2450, 4111 |
| AsuC2I | CCSGG | 1 cut(s) | 141 |
| AsuII | TTCGAA | 2 cut(s) | 2614, 3801 |
| AvaII | GGWCC | 4 cut(s) | 137, 1187, 1292, 2450 |
| BaeGI | GKGCMC | 1 cut(s) | 982 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4612, 4645 |
| BamHI | GGATCC | 2 cut(s) | 151, 1174 |
| BanI | GGYRCC | 1 cut(s) | 532 |
| BanII | GRGCYC | 3 cut(s) | 343, 1669, 2105 |
| BauI | CACGAG | 1 cut(s) | 88 |
| BbsI | GAAGAC | 2 cut(s) | 309, 2885 |
| Bbv12I | GWGCWC | 3 cut(s) | 982, 1203, 2105 |
| BbvI | GCAGC | 7 cut(s) | 72, 265, 592, 913, 3013, 4529, 4774 |
| BccI | CCATC | 7 cut(s) | 1259, 1277, 1327, 1781, 2486, 2838, 4091 |
| BceAI | ACGGC | 3 cut(s) | 250, 368, 2559 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 908, 942, 1019, 1053, 4118, 4152 |
| BciT130I | CCWGG | 3 cut(s) | 297, 2250, 3645 |
| BciVI | GTATCC | 2 cut(s) | 2921, 3066 |
| BclI | TGATCA | 4 cut(s) | 577, 661, 718, 1267 |
| BcnI | CCSGG | 1 cut(s) | 141 |
| BcoDI | GTCTC | 6 cut(s) | 98, 1858, 3822, 3855, 4407, 4776 |
| BfaI | CTAG | 6 cut(s) | 194, 1352, 2121, 3312, 3666, 3683 |
| BfmI | CTRYAG | 3 cut(s) | 681, 776, 2961 |
| BfoI | RGCGCY | 1 cut(s) | 536 |
| BfrI | CTTAAG | 1 cut(s) | 4855 |
| BfuAI | ACCTGC | 2 cut(s) | 62, 4626 |
| BfuI | GTATCC | 2 cut(s) | 2921, 3066 |
| BglII | AGATCT | 1 cut(s) | 2650 |
| BlpI | GCTNAGC | 2 cut(s) | 586, 1839 |
| BmcAI | AGTACT | 1 cut(s) | 3249 |
| Bme1390I | CCNGG | 4 cut(s) | 141, 297, 2250, 3645 |
| Bme18I | GGWCC | 4 cut(s) | 137, 1187, 1292, 2450 |
| BmgBI | CACGTC | 2 cut(s) | 3849, 4271 |
| BmgT120I | GGNCC | 5 cut(s) | 137, 1187, 1292, 2450, 4111 |
| BmiI | GGNNCC | 6 cut(s) | 138, 139, 153, 534, 1176, 1666 |
| BmrFI | CCNGG | 4 cut(s) | 141, 297, 2250, 3645 |
| BpiI | GAAGAC | 2 cut(s) | 309, 2885 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 4756, 4788 |
| BpmI | CTGGAG | 2 cut(s) | 3253, 4815 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 586, 1839 |
| Bpu14I | TTCGAA | 2 cut(s) | 2614, 3801 |
| BpuEI | CTTGAG | 2 cut(s) | 4276, 4326 |
| BpuMI | CCSGG | 1 cut(s) | 141 |
| Bsa29I | ATCGAT | 1 cut(s) | 4632 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2668, 2784, 3402 |
| BsaHI | GRCGYC | 3 cut(s) | 533, 2572, 4726 |
| BsaI | GGTCTC | 1 cut(s) | 3822 |
| BsaJI | CCNNGG | 5 cut(s) | 296, 323, 384, 542, 2151 |
| BsaWI | WCCGGW | 3 cut(s) | 1434, 3926, 4590 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 155, 185, 215, 245 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 755, 1184, 1355, 1423, 1823, 1919, 2966, 3872 |
| Bse118I | RCCGGY | 2 cut(s) | 3926, 4590 |
| Bse1I | ACTGG | 7 cut(s) | 987, 1986, 2116, 3236, 3917, 4371, 4832 |
| Bse3DI | GCAATG | 1 cut(s) | 4891 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2668, 2784, 3402 |
| BseBI | CCWGG | 3 cut(s) | 297, 2250, 3645 |
| BseCI | ATCGAT | 1 cut(s) | 4632 |
| BseDI | CCNNGG | 5 cut(s) | 296, 323, 384, 542, 2151 |
| BseJI | GATNNNNATC | 3 cut(s) | 2668, 2784, 3402 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 755, 1184, 1355, 1423, 1823, 1919, 2966, 3872 |
| BseMI | GCAATG | 1 cut(s) | 4891 |
| BseMII | CTCAG | 3 cut(s) | 356, 600, 3168 |
| BseNI | ACTGG | 7 cut(s) | 987, 1986, 2116, 3236, 3917, 4371, 4832 |
| BseRI | GAGGAG | 5 cut(s) | 124, 236, 270, 2029, 2664 |
| BseSI | GKGCMC | 1 cut(s) | 982 |
| BseXI | GCAGC | 7 cut(s) | 72, 265, 592, 913, 3013, 4529, 4774 |
| BsgI | GTGCAG | 3 cut(s) | 4324, 4604, 4773 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2071 |
| BshFI | GGCC | 8 cut(s) | 35, 389, 986, 2218, 3982, 4112, 4353, 4714 |
| BshNI | GGYRCC | 1 cut(s) | 532 |
| BshTI | ACCGGT | 2 cut(s) | 3926, 4590 |
| BshVI | ATCGAT | 1 cut(s) | 4632 |
| BsiEI | CGRYCG | 1 cut(s) | 2071 |
| BsiHKAI | GWGCWC | 3 cut(s) | 982, 1203, 2105 |
| BsiSI | CCGG | 8 cut(s) | 36, 57, 141, 1435, 2334, 3344, 3927, 4591 |
| BslFI | GGGAC | 5 cut(s) | 150, 313, 772, 3102, 4677 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 755, 1184, 1355, 1423, 1823, 1919, 2966, 3872 |
| BsmAI | GTCTC | 6 cut(s) | 98, 1858, 3822, 3855, 4407, 4776 |
| BsmBI | CGTCTC | 3 cut(s) | 98, 3855, 4776 |
| BsmFI | GGGAC | 5 cut(s) | 150, 313, 772, 3102, 4677 |
| BsmI | GAATGC | 2 cut(s) | 2994, 3427 |
| BsnI | GGCC | 8 cut(s) | 35, 389, 986, 2218, 3982, 4112, 4353, 4714 |
| Bso31I | GGTCTC | 1 cut(s) | 3822 |
| Bsp119I | TTCGAA | 2 cut(s) | 2614, 3801 |
| Bsp1286I | GDGCHC | 5 cut(s) | 343, 982, 1203, 1669, 2105 |
| Bsp1407I | TGTACA | 2 cut(s) | 2418, 4734 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 586, 1839 |
| Bsp19I | CCATGG | 1 cut(s) | 2151 |
| BspACI | CCGC | 8 cut(s) | 134, 237, 275, 353, 853, 1427, 2457, 3894 |
| BspANI | GGCC | 8 cut(s) | 35, 389, 986, 2218, 3982, 4112, 4353, 4714 |
| BspCNI | CTCAG | 3 cut(s) | 355, 599, 3167 |
| BspDI | ATCGAT | 1 cut(s) | 4632 |
| BspHI | TCATGA | 2 cut(s) | 1588, 4117 |
| BspLI | GGNNCC | 6 cut(s) | 138, 139, 153, 534, 1176, 1666 |
| BspMI | ACCTGC | 2 cut(s) | 62, 4626 |
| BspT104I | TTCGAA | 2 cut(s) | 2614, 3801 |
| BspT107I | GGYRCC | 1 cut(s) | 532 |
| BspTI | CTTAAG | 1 cut(s) | 4855 |
| BspTNI | GGTCTC | 1 cut(s) | 3822 |
| BsrDI | GCAATG | 1 cut(s) | 4891 |
| BsrFI | RCCGGY | 2 cut(s) | 3926, 4590 |
| BsrGI | TGTACA | 2 cut(s) | 2418, 4734 |
| BsrI | ACTGG | 7 cut(s) | 987, 1986, 2116, 3236, 3917, 4371, 4832 |
| BssAI | RCCGGY | 2 cut(s) | 3926, 4590 |
| BssECI | CCNNGG | 5 cut(s) | 296, 323, 384, 542, 2151 |
| BssNAI | GTATAC | 1 cut(s) | 3472 |
| BssNI | GRCGYC | 3 cut(s) | 533, 2572, 4726 |
| BssSI | CACGAG | 1 cut(s) | 88 |
| BssT1I | CCWWGG | 2 cut(s) | 542, 2151 |
| Bst1107I | GTATAC | 1 cut(s) | 3472 |
| Bst2BI | CACGAG | 1 cut(s) | 88 |
| Bst2UI | CCWGG | 3 cut(s) | 297, 2250, 3645 |
| BstACI | GRCGYC | 3 cut(s) | 533, 2572, 4726 |
| BstAFI | CTTAAG | 1 cut(s) | 4855 |
| BstAUI | TGTACA | 2 cut(s) | 2418, 4734 |
| BstBI | TTCGAA | 2 cut(s) | 2614, 3801 |
| BstC8I | GCNNGC | 6 cut(s) | 351, 786, 1642, 2486, 3878, 4792 |
| BstDEI | CTNAG | 9 cut(s) | 271, 342, 568, 586, 1582, 1645, 1839, 3154, 3368 |
| BstDSI | CCRYGG | 2 cut(s) | 384, 2151 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 753, 1821 |
| BstH2I | RGCGCY | 1 cut(s) | 536 |
| BstHHI | GCGC | 3 cut(s) | 160, 535, 4522 |
| BstMAI | GTCTC | 6 cut(s) | 98, 1858, 3822, 3855, 4407, 4776 |
| BstMCI | CGRYCG | 1 cut(s) | 2071 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 164, 530, 683, 737, 3080, 4394 |
| BstNI | CCWGG | 3 cut(s) | 297, 2250, 3645 |
| BstNSI | RCATGY | 5 cut(s) | 87, 1629, 2488, 3078, 3244 |
| BstSCI | CCNGG | 4 cut(s) | 139, 295, 2248, 3643 |
| BstSFI | CTRYAG | 3 cut(s) | 681, 776, 2961 |
| BstSLI | GKGCMC | 1 cut(s) | 982 |
| BstV1I | GCAGC | 7 cut(s) | 72, 265, 592, 913, 3013, 4529, 4774 |
| BstV2I | GAAGAC | 2 cut(s) | 309, 2885 |
| BstX2I | RGATCY | 3 cut(s) | 151, 1174, 2650 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 910 |
| BstYI | RGATCY | 3 cut(s) | 151, 1174, 2650 |
| BstZ17I | GTATAC | 1 cut(s) | 3472 |
| Bsu15I | ATCGAT | 1 cut(s) | 4632 |
| BsuI | GTATCC | 2 cut(s) | 2921, 3066 |
| BsuRI | GGCC | 8 cut(s) | 35, 389, 986, 2218, 3982, 4112, 4353, 4714 |
| BsuTUI | ATCGAT | 1 cut(s) | 4632 |
| BtgI | CCRYGG | 2 cut(s) | 384, 2151 |
| BtgZI | GCGATG | 1 cut(s) | 3114 |
| BtrI | CACGTC | 2 cut(s) | 3849, 4271 |
| BtsI | GCAGTG | 1 cut(s) | 247 |
| BtsIMutI | CAGTG | 8 cut(s) | 247, 426, 980, 2875, 3229, 4357, 4407, 4440 |
| BveI | ACCTGC | 2 cut(s) | 62, 4626 |
| Cac8I | GCNNGC | 6 cut(s) | 351, 786, 1642, 2486, 3878, 4792 |
| CciI | TCATGA | 2 cut(s) | 1588, 4117 |
| CfoI | GCGC | 3 cut(s) | 160, 535, 4522 |
| Cfr10I | RCCGGY | 2 cut(s) | 3926, 4590 |
| Cfr13I | GGNCC | 5 cut(s) | 137, 1187, 1292, 2450, 4111 |
| ClaI | ATCGAT | 1 cut(s) | 4632 |
| CseI | GACGC | 8 cut(s) | 199, 270, 2580, 3135, 3962, 4674, 4734, 4793 |
| CsiI | ACCWGGT | 1 cut(s) | 3643 |
| CspAI | ACCGGT | 2 cut(s) | 3926, 4590 |
| DdeI | CTNAG | 9 cut(s) | 271, 342, 568, 586, 1582, 1645, 1839, 3154, 3368 |
| DinI | GGCGCC | 1 cut(s) | 534 |
| DraI | TTTAAA | 8 cut(s) | 1306, 1716, 2257, 2851, 3321, 3673, 3991, 4005 |
| DraIII | CACNNNGTG | 1 cut(s) | 1196 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2172 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2172 |
| Ecl136II | GAGCTC | 1 cut(s) | 2103 |
| Eco130I | CCWWGG | 2 cut(s) | 542, 2151 |
| Eco147I | AGGCCT | 1 cut(s) | 4714 |
| Eco24I | GRGCYC | 3 cut(s) | 343, 1669, 2105 |
| Eco31I | GGTCTC | 1 cut(s) | 3822 |
| Eco32I | GATATC | 1 cut(s) | 4062 |
| Eco47I | GGWCC | 4 cut(s) | 137, 1187, 1292, 2450 |
| Eco53kI | GAGCTC | 1 cut(s) | 2103 |
| Eco57I | CTGAAG | 5 cut(s) | 2700, 3138, 3609, 4383, 4464 |
| EcoICRI | GAGCTC | 1 cut(s) | 2103 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 753, 1821 |
| EcoO109I | RGGNCCY | 3 cut(s) | 137, 1292, 4111 |
| EcoRI | GAATTC | 2 cut(s) | 431, 1419 |
| EcoRII | CCWGG | 3 cut(s) | 295, 2248, 3643 |
| EcoRV | GATATC | 1 cut(s) | 4062 |
| EcoT14I | CCWWGG | 2 cut(s) | 542, 2151 |
| EcoT22I | ATGCAT | 4 cut(s) | 1704, 3076, 3136, 3242 |
| EcoT38I | GRGCYC | 3 cut(s) | 343, 1669, 2105 |
| EgeI | GGCGCC | 1 cut(s) | 534 |
| EheI | GGCGCC | 1 cut(s) | 534 |
| ErhI | CCWWGG | 2 cut(s) | 542, 2151 |
| Esp3I | CGTCTC | 3 cut(s) | 98, 3855, 4776 |
| FaqI | GGGAC | 5 cut(s) | 150, 313, 772, 3102, 4677 |
| FauI | CCCGC | 1 cut(s) | 127 |
| FauNDI | CATATG | 2 cut(s) | 2323, 2751 |
| FbaI | TGATCA | 4 cut(s) | 577, 661, 718, 1267 |
| FblI | GTMKAC | 2 cut(s) | 775, 3471 |
| FriOI | GRGCYC | 3 cut(s) | 343, 1669, 2105 |
| FspBI | CTAG | 6 cut(s) | 194, 1352, 2121, 3312, 3666, 3683 |
| GlaI | GCGC | 3 cut(s) | 159, 534, 4521 |
| GsuI | CTGGAG | 2 cut(s) | 3253, 4815 |
| HaeII | RGCGCY | 1 cut(s) | 536 |
| HaeIII | GGCC | 8 cut(s) | 35, 389, 986, 2218, 3982, 4112, 4353, 4714 |
| HapII | CCGG | 8 cut(s) | 36, 57, 141, 1435, 2334, 3344, 3927, 4591 |
| HgaI | GACGC | 8 cut(s) | 199, 270, 2580, 3135, 3962, 4674, 4734, 4793 |
| HhaI | GCGC | 3 cut(s) | 160, 535, 4522 |
| Hin1I | GRCGYC | 3 cut(s) | 533, 2572, 4726 |
| Hin6I | GCGC | 3 cut(s) | 158, 533, 4520 |
| HinP1I | GCGC | 3 cut(s) | 158, 533, 4520 |
| HincII | GTYRAC | 2 cut(s) | 423, 1432 |
| HindII | GTYRAC | 2 cut(s) | 423, 1432 |
| HindIII | AAGCTT | 1 cut(s) | 4852 |
| HpaII | CCGG | 8 cut(s) | 36, 57, 141, 1435, 2334, 3344, 3927, 4591 |
| Hpy166II | GTNNAC | 9 cut(s) | 423, 776, 980, 1190, 1245, 1432, 3472, 4364, 4735 |
| Hpy8I | GTNNAC | 9 cut(s) | 423, 776, 980, 1190, 1245, 1432, 3472, 4364, 4735 |
| Hpy99I | CGWCG | 3 cut(s) | 215, 707, 4643 |
| HpyCH4IV | ACGT | 5 cut(s) | 899, 1686, 3848, 4041, 4270 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 164, 530, 683, 737, 3080, 4394 |
| HpyF3I | CTNAG | 9 cut(s) | 271, 342, 568, 586, 1582, 1645, 1839, 3154, 3368 |
| HpySE526I | ACGT | 5 cut(s) | 899, 1686, 3848, 4041, 4270 |
| Hsp92I | GRCGYC | 3 cut(s) | 533, 2572, 4726 |
| HspAI | GCGC | 3 cut(s) | 158, 533, 4520 |
| KasI | GGCGCC | 1 cut(s) | 532 |
| KflI | GGGWCCC | 1 cut(s) | 137 |
| Ksp22I | TGATCA | 4 cut(s) | 577, 661, 718, 1267 |
| LmnI | GCTCC | 4 cut(s) | 1256, 1664, 3387, 3781 |
| Lsp1109I | GCAGC | 7 cut(s) | 72, 265, 592, 913, 3013, 4529, 4774 |
| MabI | ACCWGGT | 1 cut(s) | 3643 |
| MaeI | CTAG | 6 cut(s) | 194, 1352, 2121, 3312, 3666, 3683 |
| MaeII | ACGT | 5 cut(s) | 899, 1686, 3848, 4041, 4270 |
| MaeIII | GTNAC | 8 cut(s) | 1812, 3020, 3164, 3175, 3530, 3922, 4696, 4768 |
| MfeI | CAATTG | 2 cut(s) | 4557, 4686 |
| MflI | RGATCY | 3 cut(s) | 151, 1174, 2650 |
| MhlI | GDGCHC | 5 cut(s) | 343, 982, 1203, 1669, 2105 |
| Mly113I | GGCGCC | 1 cut(s) | 533 |
| MlyI | GAGTC | 3 cut(s) | 1388, 2792, 3248 |
| MmeI | TCCRAC | 2 cut(s) | 928, 1169 |
| Mph1103I | ATGCAT | 4 cut(s) | 1704, 3076, 3136, 3242 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2500, 3628 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1808, 3976 |
| MspA1I | CMGCKG | 3 cut(s) | 353, 740, 2966 |
| MspCI | CTTAAG | 1 cut(s) | 4855 |
| MspI | CCGG | 8 cut(s) | 36, 57, 141, 1435, 2334, 3344, 3927, 4591 |
| MspR9I | CCNGG | 4 cut(s) | 141, 297, 2250, 3645 |
| MunI | CAATTG | 2 cut(s) | 4557, 4686 |
| Mva1269I | GAATGC | 2 cut(s) | 2994, 3427 |
| MvaI | CCWGG | 3 cut(s) | 297, 2250, 3645 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 164, 530, 683, 737, 3080, 4394 |
| NarI | GGCGCC | 1 cut(s) | 533 |
| NciI | CCSGG | 1 cut(s) | 141 |
| NcoI | CCATGG | 1 cut(s) | 2151 |
| NdeI | CATATG | 2 cut(s) | 2323, 2751 |
| NlaIV | GGNNCC | 6 cut(s) | 138, 139, 153, 534, 1176, 1666 |
| NmeAIII | GCCGAG | 2 cut(s) | 348, 2124 |
| NmuCI | GTSAC | 4 cut(s) | 3164, 3530, 4696, 4768 |
| NsiI | ATGCAT | 4 cut(s) | 1704, 3076, 3136, 3242 |
| NspI | RCATGY | 5 cut(s) | 87, 1629, 2488, 3078, 3244 |
| NspV | TTCGAA | 2 cut(s) | 2614, 3801 |
| PacI | TTAATTAA | 1 cut(s) | 1485 |
| PaeI | GCATGC | 1 cut(s) | 2488 |
| PagI | TCATGA | 2 cut(s) | 1588, 4117 |
| PaqCI | CACCTGC | 2 cut(s) | 62, 4626 |
| PceI | AGGCCT | 1 cut(s) | 4714 |
| PciI | ACATGT | 1 cut(s) | 1625 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 381, 4638 |
| PctI | GAATGC | 2 cut(s) | 2994, 3427 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2500, 3628 |
| PflFI | GACNNNGTC | 1 cut(s) | 4269 |
| PinAI | ACCGGT | 2 cut(s) | 3926, 4590 |
| PleI | GAGTC | 3 cut(s) | 1388, 2792, 3248 |
| PluTI | GGCGCC | 1 cut(s) | 536 |
| PpsI | GAGTC | 3 cut(s) | 1388, 2792, 3248 |
| PpuMI | RGGWCCY | 2 cut(s) | 137, 1292 |
| PscI | ACATGT | 1 cut(s) | 1625 |
| PsiI | TTATAA | 6 cut(s) | 615, 1227, 1368, 1871, 2192, 3128 |
| Psp124BI | GAGCTC | 1 cut(s) | 2105 |
| Psp1406I | AACGTT | 1 cut(s) | 4041 |
| Psp5II | RGGWCCY | 2 cut(s) | 137, 1292 |
| Psp6I | CCWGG | 3 cut(s) | 295, 2248, 3643 |
| PspGI | CCWGG | 3 cut(s) | 295, 2248, 3643 |
| PspN4I | GGNNCC | 6 cut(s) | 138, 139, 153, 534, 1176, 1666 |
| PspPI | GGNCC | 5 cut(s) | 137, 1187, 1292, 2450, 4111 |
| PspPPI | RGGWCCY | 2 cut(s) | 137, 1292 |
| PsuI | RGATCY | 3 cut(s) | 151, 1174, 2650 |
| PsyI | GACNNNGTC | 1 cut(s) | 4269 |
| PvuII | CAGCTG | 2 cut(s) | 740, 2966 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1808, 3976 |
| SacI | GAGCTC | 1 cut(s) | 2105 |
| Sau96I | GGNCC | 5 cut(s) | 137, 1187, 1292, 2450, 4111 |
| ScaI | AGTACT | 1 cut(s) | 3249 |
| SchI | GAGTC | 3 cut(s) | 1388, 2792, 3248 |
| ScrFI | CCNGG | 4 cut(s) | 141, 297, 2250, 3645 |
| SduI | GDGCHC | 5 cut(s) | 343, 982, 1203, 1669, 2105 |
| SexAI | ACCWGGT | 1 cut(s) | 3643 |
| SfcI | CTRYAG | 3 cut(s) | 681, 776, 2961 |
| SfoI | GGCGCC | 1 cut(s) | 534 |
| SfuI | TTCGAA | 2 cut(s) | 2614, 3801 |
| SinI | GGWCC | 4 cut(s) | 137, 1187, 1292, 2450 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1808, 3976 |
| SmlI | CTYRAG | 3 cut(s) | 4255, 4341, 4855 |
| SmoI | CTYRAG | 3 cut(s) | 4255, 4341, 4855 |
| SphI | GCATGC | 1 cut(s) | 2488 |
| SseBI | AGGCCT | 1 cut(s) | 4714 |
| SsiI | CCGC | 8 cut(s) | 134, 237, 275, 353, 853, 1427, 2457, 3894 |
| SspDI | GGCGCC | 1 cut(s) | 532 |
| SspI | AATATT | 7 cut(s) | 2404, 3049, 3481, 3912, 4105, 4203, 4326 |
| SspMI | CTAG | 6 cut(s) | 194, 1352, 2121, 3312, 3666, 3683 |
| SstI | GAGCTC | 1 cut(s) | 2105 |
| StuI | AGGCCT | 1 cut(s) | 4714 |
| StyD4I | CCNGG | 4 cut(s) | 139, 295, 2248, 3643 |
| StyI | CCWWGG | 2 cut(s) | 542, 2151 |
| TaiI | ACGT | 5 cut(s) | 902, 1689, 3851, 4044, 4273 |
| TatI | WGTACW | 6 cut(s) | 1321, 2418, 3247, 4363, 4608, 4734 |
| TauI | GCSGC | 3 cut(s) | 240, 278, 3897 |
| TscAI | CASTG | 8 cut(s) | 247, 433, 987, 2875, 3236, 4364, 4407, 4447 |
| TseFI | GTSAC | 4 cut(s) | 3164, 3530, 4696, 4768 |
| TseI | GCWGC | 7 cut(s) | 60, 278, 605, 926, 3026, 4517, 4787 |
| Tsp45I | GTSAC | 4 cut(s) | 3164, 3530, 4696, 4768 |
| TspGWI | ACGGA | 7 cut(s) | 951, 1722, 1902, 2791, 3549, 3855, 4722 |
| TspRI | CASTG | 8 cut(s) | 247, 433, 987, 2875, 3236, 4364, 4407, 4447 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4269 |
| Vha464I | CTTAAG | 1 cut(s) | 4855 |
| VneI | GTGCAC | 1 cut(s) | 978 |
| VpaK11BI | GGWCC | 4 cut(s) | 137, 1187, 1292, 2450 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 753, 1821 |
| XbaI | TCTAGA | 2 cut(s) | 193, 3665 |
| XceI | RCATGY | 5 cut(s) | 87, 1629, 2488, 3078, 3244 |
| XmiI | GTMKAC | 2 cut(s) | 775, 3471 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2500, 3628 |
| XspI | CTAG | 6 cut(s) | 194, 1352, 2121, 3312, 3666, 3683 |
| ZrmI | AGTACT | 1 cut(s) | 3249 |
| Zsp2I | ATGCAT | 4 cut(s) | 1704, 3076, 3136, 3242 |