Rw4G009260

Belongs to the helicase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
20712304 .. 20715900
3597 bp
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UTR
Exon/CDS
Intron
Rw4G009260.1

Sequence Viewer

Length: 3168 bp
ATGTTTGCATTTACGTCGATGGGAGCTAAAATCGATGAAACAATCAATGATGGATCCGGACCCTACATTTTTAAAATTAGTGGCCAAGTACATCATCTAATGGGTTCTCTCTTACCTATTGAAGGTGAATCTCCGAAATTTGCACAACTGTATATATATGACACTCATAATGAAGTTGCAAATCGACTACATGCTATTGAAGGTCTCAATCCAGAAATTGTAGGAGACTTGATTAAAATGTTCGATGAAGTCAATGAGTTGGTCAGATTTTTCAGAAATGTCAGAAATAAATATGATGATCATTCTTTACGTTCTTTAAATTTAACTATCTTGGATCATGAAGAAAATCGAGAAAAACAATATGAACAACCAACATGTGATGAAGTTGCTGGTTTAGTGGTTGGTGATATTGGACTTTATGATTCAGACAAAGACATTATAGCAGAGACGCATGATGGACGTTTACAACGAATATCAAAAATACATCCAAAATATATGTCTCTACAATATCCAATTCTTTTTCCATATGGTGAAGACGGTTATAAAACGGAACTTAAAATGCTACCACCTAAAGGAAACAGGCAATATAAGCGTGAAAATGTCTCTATGCGAAGCTTTATAGCATATCAAGTTCAAGAAAGATATAATCAGTCAAACACTTTACTAAAAGGTGGCAGATTATTCCAACAATTTTTGGTTGATGCTTACGCAACTATAGAAGAAAGTCGATTACATTTTTTAAGAAAAAATCAAAGCAGTTTGAGAAGCGATGCTTATAAAGGTATATGTGATGCTGTATCAAGAGGTGATAATGATGCCAGTAATTTAGGACAAAAAGTGATTTTACCGAGCTCATATACTGGAAGTCCTCGATATATGATGAAAAATTATCAAGATGCTATGGCAATTTGTCGACAATACGGTCATCCTGATTTGTTTATAACTTTCACCTGTAATGTAAAATGGCCTGAAATTTCAAGAGCGTTAGAAAACAAACATGGCTGTAAACCAGAAGACAGACCAGATATAGTCTCAAGAGTTTTTAAAATGAAACATGATGATCTTCTTTCATATATCAAATCTGGTAAACCATTCGGAGAAATTGAAGCAGATGTTTCTACGATTGAATTTCAAAAAAGAGGTCTTCCTCATTCTCATATGTTATTTTGGCTGAAGAAAAACTATAAATGTTTTACAGCAACCGATATTGATTCTATCATTTGTGCTGAATTACCAGATAGAAATATTGATCCATCTCTGTACAAAATTGTTAGTCAATTTATGATTCACGGCCCCTGTGGACAATTAAATTTAAAAGCTCCATGTATGCGAGATGGCAAGTGTTCAAAATTCTTCCCAAAGCCATACAAGGAAAAGACCATTTTTGAAACAAATGTTGCACCCATATATAGACGTCGTGATGATGAGACGAAATTTGTGATAAAAAACGGTGTTCAAATCGATAATCGTTTTGTTGTACCTTATAATCGAGATCTTTTGTTAAGATACAACGCTCATATAAATGTTGAATCTTGCTCCCAATCAATGTTAATCAAATATTTGTTCAAATACATTAATAAAGGTCCTGATAGAGCTAGAGTTGGCTTTCAAGAAAATTTAAATGATGAAATTCAAACATATCTTAATTGTAGATACATATCTCCTCCTGAAGCAGTTTGGAGATTATTTGAATATCCTATTCATTCTAGACATCCAGCTGTTGAATTATTGCCAGTGCATATGCCAGGGGAACAAAATATCATTTTCAGTGAGTCTCAATCTCTTGAATCAATCATTTCAAATAAGTCTTCAGAAGATACAATGCTTACAGCGTGGTTTAAAGCAAATGAAAATTACCATGAAGCCAAACCATTAACTTACGCAGAATTTCCATCAAAGTTTGTTTGGAATCACCGTAACAAATTATGGACGCCTCGAAAGAAAGGATATTCAATAGGCAGAATAGCTAATGTTTATCCTACATCTGGTGAATTATATTATTTGAGATTACTTTTAAATACACAAAGAGGATGTTCAAATTACACTTCTGTTAGAACTATTGACAATATTGTATATCCTTCATATCAAGATGCATGTCGAGCTATAGGACTATTAGGCGATGATAAAGAATGGTCTGAAGCTCTCACAAATGCTTTGTACACAGCATCATGTTCAGAATTACTACTGCAATTAAATGATGACCAAAGAATTATATATGAAAATGTGATTCAAACAGTTTCTGATAAGAGTTACGGACTTTTTTTTGTATATGGTCATGGAGGAACAGGTAAAACTTTCCTGTGGCATACAATAATCAGCAAATTACGTTCTGAAGGAAAAATTGTATTAGCAGTGGCTTCATCTGGAATTGCTTCACTATTACTACCAAATGGCAGAACTGCTCATTCCAGATTTAAAATACCTCTTGCTATAACAGAATCTTCAATATGCTCAATAAAAAAGGGAACTCATTTAGCAAAATTGATTGAAAAAGCTGATTTAATCATTTGGGACGAAGCTCCAATGACCAATAAACATTGTTTCGAATCTTTGAACAAGTCTCTTATGGATATATTATCACACCTCCGTCCATCTCAGACTAATGTTCCATTTGGAGGAAAACCTATTATACTTGGTGGAGATTTTAGACAGATATTACCAGTTATTAATGGAGGAACAAAAGCTCAAATAATAGATGCTTCTTTAAATAATTCATGTCTATGGCCTTTTTTTAGAATTTTTTATTTAAAAGAAAATATGAGATTATTGAAGAGAGGGTTAAGCATTGAAGAAAAAGAAAGAATATCAAAATTTGCAGAATGGATTTTACAAATCGGTGATGGAAATATTTGTGCTATTCAAGATTCAGATGATAAAGATGCTTCTTGGGTTGAAATTCCAGACGATATGCTTATTCATACTTATAGTGATCCGATTAGCGCAATATTTCTTGCTACTTACCCAGATTTTGATACAAATTACCAAAAATTTGATTACTTAAAAGAACGCGCTATTATTACACCAAAAAATGCTACAGTTAATGATATCAATAATTACGCAATAAATTTATTACCAGGTGACGCAGCCATTTATTTAAGTTCCGACACTATATGTCCGACAACTGAAAATATAGAAAATTTAAATATTTATATCCTCCAGAATTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

1055

Amino Acids

120.84

Weight (kDa)

6.85

Isoelectric Point (pI)

43.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Helitron_like_N PF14214 206 - 388 1e-58 Helitron helicase-like domain at N-terminus
PIF1 PF05970 730 - 953 1.2e-90 PIF1-like helicase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 543, 777, 941, 1485
AasI GACNNNNNNGTC 1 cut(s) 921
AatII GACGTC 1 cut(s) 1417
AccI GTMKAC 1 cut(s) 913
AccII CGCG 1 cut(s) 3009
AccIII TCCGGA 1 cut(s) 56
AclWI GGATC 5 cut(s) 48, 61, 342, 1244, 2924
AcoI YGGCCR 1 cut(s) 82
AcuI CTGAAG 5 cut(s) 1193, 1689, 1794, 2157, 2352
AcyI GRCGYC 2 cut(s) 1414, 1931
AfaI GTAC 4 cut(s) 90, 1262, 1479, 2159
AfiI CCNNNNNNNGG 4 cut(s) 122, 572, 1985, 2615
AflIII ACRYGT 1 cut(s) 374
AjnI CCWGG 2 cut(s) 1744, 3073
Alw21I GWGCWC 1 cut(s) 854
Alw26I GTCTC 9 cut(s) 209, 219, 440, 504, 607, 1036, 1421, 1779, 2565
AlwI GGATC 5 cut(s) 48, 61, 342, 1244, 2924
AlwNI CAGNNNCTG 1 cut(s) 2240
Aor13HI TCCGGA 1 cut(s) 56
AoxI GGCC 4 cut(s) 82, 965, 1291, 2723
ApeKI GCWGC 1 cut(s) 3083
ArsI GACNNNNNNTTYG 4 cut(s) 482, 514, 1126, 1158
AseI ATTAAT 2 cut(s) 1575, 2667
Asp700I GAANNNNTTC 1 cut(s) 2371
AspLEI GCGC 2 cut(s) 2942, 3011
AspS9I GGNCC 3 cut(s) 59, 1292, 1583
AsuHPI GGTGA 9 cut(s) 137, 416, 542, 818, 940, 1904, 2000, 2849, 3089
AsuII TTCGAA 1 cut(s) 2544
AvaII GGWCC 2 cut(s) 59, 1583
BalI TGGCCA 1 cut(s) 84
BamHI GGATCC 1 cut(s) 53
BanII GRGCYC 1 cut(s) 854
BbsI GAAGAC 4 cut(s) 540, 1020, 1136, 1800
Bbv12I GWGCWC 1 cut(s) 854
BbvI GCAGC 1 cut(s) 3095
BccI CCATC 8 cut(s) 13, 44, 449, 1261, 1328, 1900, 2599, 2834
BceAI ACGGC 1 cut(s) 1306
BcgI CGANNNNNNTGC 1 cut(s) 31
BciT130I CCWGG 2 cut(s) 1746, 3075
BclI TGATCA 1 cut(s) 298
BcoDI GTCTC 9 cut(s) 209, 219, 440, 504, 607, 1036, 1421, 1779, 2565
BfaI CTAG 2 cut(s) 1596, 1707
BfmI CTRYAG 3 cut(s) 714, 2103, 3033
BglII AGATCT 1 cut(s) 1492
BisI GCNGC 1 cut(s) 3084
BlsI GCNGC 1 cut(s) 3085
Bme1390I CCNGG 2 cut(s) 1746, 3075
Bme18I GGWCC 2 cut(s) 59, 1583
BmgT120I GGNCC 3 cut(s) 59, 1292, 1583
BmiI GGNNCC 3 cut(s) 55, 61, 1294
BmrFI CCNGG 2 cut(s) 1746, 3075
BmsI GCATC 9 cut(s) 691, 760, 781, 805, 886, 2080, 2174, 2686, 2869
BpiI GAAGAC 4 cut(s) 540, 1020, 1136, 1800
BpmI CTGGAG 1 cut(s) 3140
Bpu14I TTCGAA 1 cut(s) 2544
BpuEI CTTGAG 1 cut(s) 1018
Bsa29I ATCGAT 2 cut(s) 33, 1461
BsaBI GATNNNNATC 1 cut(s) 1657
BsaHI GRCGYC 2 cut(s) 1414, 1931
BsaI GGTCTC 1 cut(s) 209
BsaJI CCNNGG 1 cut(s) 1745
BsaWI WCCGGW 1 cut(s) 56
Bsc4I CCNNNNNNNGG 4 cut(s) 122, 572, 1985, 2615
Bse1I ACTGG 4 cut(s) 819, 865, 1733, 2660
Bse8I GATNNNNATC 1 cut(s) 1657
BseAI TCCGGA 1 cut(s) 56
BseBI CCWGG 2 cut(s) 1746, 3075
BseCI ATCGAT 2 cut(s) 33, 1461
BseDI CCNNGG 1 cut(s) 1745
BseGI GGATG 4 cut(s) 484, 925, 1711, 2036
BseJI GATNNNNATC 1 cut(s) 1657
BseLI CCNNNNNNNGG 4 cut(s) 122, 572, 1985, 2615
BseMII CTCAG 1 cut(s) 2609
BseNI ACTGG 4 cut(s) 819, 865, 1733, 2660
BseRI GAGGAG 1 cut(s) 1653
BseXI GCAGC 1 cut(s) 3095
Bsh1236I CGCG 1 cut(s) 3009
BshFI GGCC 4 cut(s) 84, 967, 1293, 2725
BshVI ATCGAT 2 cut(s) 33, 1461
BsiHKAI GWGCWC 1 cut(s) 854
BsiSI CCGG 1 cut(s) 57
BslFI GGGAC 1 cut(s) 2525
BslI CCNNNNNNNGG 4 cut(s) 122, 572, 1985, 2615
BsmAI GTCTC 9 cut(s) 209, 219, 440, 504, 607, 1036, 1421, 1779, 2565
BsmBI CGTCTC 2 cut(s) 440, 1421
BsmFI GGGAC 1 cut(s) 2525
BsnI GGCC 4 cut(s) 84, 967, 1293, 2725
Bso31I GGTCTC 1 cut(s) 209
Bsp119I TTCGAA 1 cut(s) 2544
Bsp1286I GDGCHC 1 cut(s) 854
Bsp13I TCCGGA 1 cut(s) 56
Bsp1407I TGTACA 2 cut(s) 1260, 2157
Bsp143I GATC 7 cut(s) 53, 298, 334, 1060, 1249, 1492, 2929
BspANI GGCC 4 cut(s) 84, 967, 1293, 2725
BspCNI CTCAG 1 cut(s) 2608
BspDI ATCGAT 2 cut(s) 33, 1461
BspEI TCCGGA 1 cut(s) 56
BspFNI CGCG 1 cut(s) 3009
BspHI TCATGA 1 cut(s) 337
BspLI GGNNCC 3 cut(s) 55, 61, 1294
BspPI GGATC 5 cut(s) 48, 61, 342, 1244, 2924
BspT104I TTCGAA 1 cut(s) 2544
BspTNI GGTCTC 1 cut(s) 209
BsrGI TGTACA 2 cut(s) 1260, 2157
BsrI ACTGG 4 cut(s) 819, 865, 1733, 2660
BssECI CCNNGG 1 cut(s) 1745
BssMI GATC 7 cut(s) 53, 298, 334, 1060, 1249, 1492, 2929
BssNI GRCGYC 2 cut(s) 1414, 1931
Bst2UI CCWGG 2 cut(s) 1746, 3075
Bst4CI ACNGT 7 cut(s) 150, 539, 923, 1451, 1916, 2236, 3037
Bst6I CTCTTC 1 cut(s) 2765
BstACI GRCGYC 2 cut(s) 1414, 1931
BstAUI TGTACA 2 cut(s) 1260, 2157
BstBI TTCGAA 1 cut(s) 2544
BstDEI CTNAG 1 cut(s) 2595
BstENI CCTNNNNNAGG 1 cut(s) 120
BstF5I GGATG 4 cut(s) 484, 925, 1711, 2036
BstFNI CGCG 1 cut(s) 3009
BstHHI GCGC 2 cut(s) 2942, 3011
BstKTI GATC 7 cut(s) 56, 301, 337, 1063, 1252, 1495, 2932
BstMAI GTCTC 9 cut(s) 209, 219, 440, 504, 607, 1036, 1421, 1779, 2565
BstMBI GATC 7 cut(s) 53, 298, 334, 1060, 1249, 1492, 2929
BstMWI GCNNNNNNNGC 2 cut(s) 589, 2099
BstNI CCWGG 2 cut(s) 1746, 3075
BstNSI RCATGY 3 cut(s) 194, 378, 2097
BstSCI CCNGG 2 cut(s) 1744, 3073
BstSFI CTRYAG 3 cut(s) 714, 2103, 3033
BstUI CGCG 1 cut(s) 3009
BstV1I GCAGC 1 cut(s) 3095
BstV2I GAAGAC 4 cut(s) 540, 1020, 1136, 1800
BstX2I RGATCY 2 cut(s) 53, 1492
BstYI RGATCY 2 cut(s) 53, 1492
Bsu15I ATCGAT 2 cut(s) 33, 1461
BsuRI GGCC 4 cut(s) 84, 967, 1293, 2725
BsuTUI ATCGAT 2 cut(s) 33, 1461
BtgZI GCGATG 2 cut(s) 783, 2133
BtsCI GGATG 4 cut(s) 484, 925, 1711, 2036
BtsI GCAGTG 1 cut(s) 2358
BtsIMutI CAGTG 3 cut(s) 1740, 1774, 2358
CaiI CAGNNNCTG 1 cut(s) 2240
CciI TCATGA 1 cut(s) 337
CfoI GCGC 2 cut(s) 2942, 3011
Cfr13I GGNCC 3 cut(s) 59, 1292, 1583
ClaI ATCGAT 2 cut(s) 33, 1461
CseI GACGC 3 cut(s) 457, 1939, 3089
CsiI ACCWGGT 1 cut(s) 3073
Csp6I GTAC 4 cut(s) 89, 1261, 1478, 2158
CviQI GTAC 4 cut(s) 89, 1261, 1478, 2158
DdeI CTNAG 1 cut(s) 2595
DpnI GATC 7 cut(s) 55, 300, 336, 1062, 1251, 1494, 2931
DpnII GATC 7 cut(s) 53, 298, 334, 1060, 1249, 1492, 2929
DrdI GACNNNNNNGTC 1 cut(s) 921
DseDI GACNNNNNNGTC 1 cut(s) 921
EaeI YGGCCR 1 cut(s) 82
Eam1104I CTCTTC 1 cut(s) 2765
EarI CTCTTC 1 cut(s) 2765
Ecl136II GAGCTC 1 cut(s) 852
Eco24I GRGCYC 1 cut(s) 854
Eco31I GGTCTC 1 cut(s) 209
Eco32I GATATC 1 cut(s) 3046
Eco47I GGWCC 2 cut(s) 59, 1583
Eco53kI GAGCTC 1 cut(s) 852
Eco57I CTGAAG 5 cut(s) 1193, 1689, 1794, 2157, 2352
EcoICRI GAGCTC 1 cut(s) 852
EcoNI CCTNNNNNAGG 1 cut(s) 120
EcoO109I RGGNCCY 1 cut(s) 1583
EcoRII CCWGG 2 cut(s) 1744, 3073
EcoRV GATATC 1 cut(s) 3046
EcoT22I ATGCAT 1 cut(s) 2095
EcoT38I GRGCYC 1 cut(s) 854
Esp3I CGTCTC 2 cut(s) 440, 1421
FalI AAGNNNNNCTT 2 cut(s) 757, 789
FaqI GGGAC 1 cut(s) 2525
FauNDI CATATG 3 cut(s) 526, 1158, 1740
FbaI TGATCA 1 cut(s) 298
FblI GTMKAC 1 cut(s) 913
Fnu4HI GCNGC 1 cut(s) 3084
FokI GGATG 4 cut(s) 471, 912, 1698, 2043
FriOI GRGCYC 1 cut(s) 854
Fsp4HI GCNGC 1 cut(s) 3084
FspBI CTAG 2 cut(s) 1596, 1707
GlaI GCGC 2 cut(s) 2941, 3010
GluI GCNGC 1 cut(s) 3084
GsuI CTGGAG 1 cut(s) 3140
HaeIII GGCC 4 cut(s) 84, 967, 1293, 2725
HapII CCGG 1 cut(s) 57
HgaI GACGC 3 cut(s) 457, 1939, 3089
HhaI GCGC 2 cut(s) 2942, 3011
Hin1I GRCGYC 2 cut(s) 1414, 1931
Hin6I GCGC 2 cut(s) 2940, 3009
HinP1I GCGC 2 cut(s) 2940, 3009
HincII GTYRAC 1 cut(s) 914
HindII GTYRAC 1 cut(s) 914
HindIII AAGCTT 1 cut(s) 613
HpaII CCGG 1 cut(s) 57
HphI GGTGA 9 cut(s) 137, 416, 542, 818, 940, 1904, 2000, 2849, 3089
Hpy166II GTNNAC 6 cut(s) 464, 914, 1007, 1088, 1301, 2160
Hpy8I GTNNAC 6 cut(s) 464, 914, 1007, 1088, 1301, 2160
Hpy99I CGWCG 2 cut(s) 19, 1419
HpyAV CCTTC 4 cut(s) 116, 194, 2088, 2327
HpyCH4III ACNGT 7 cut(s) 150, 539, 923, 1451, 1916, 2236, 3037
HpyCH4IV ACGT 5 cut(s) 14, 310, 460, 1414, 2326
HpyCH4V TGCA 8 cut(s) 8, 143, 179, 1400, 1738, 2093, 2188, 2816
HpyF10VI GCNNNNNNNGC 2 cut(s) 589, 2099
HpyF3I CTNAG 1 cut(s) 2595
HpySE526I ACGT 5 cut(s) 14, 310, 460, 1414, 2326
Hsp92I GRCGYC 2 cut(s) 1414, 1931
HspAI GCGC 2 cut(s) 2940, 3009
Kpn2I TCCGGA 1 cut(s) 56
Ksp22I TGATCA 1 cut(s) 298
Kzo9I GATC 7 cut(s) 53, 298, 334, 1060, 1249, 1492, 2929
LmnI GCTCC 4 cut(s) 23, 1324, 1541, 2524
Lsp1109I GCAGC 1 cut(s) 3095
LweI GCATC 9 cut(s) 691, 760, 781, 805, 886, 2080, 2174, 2686, 2869
MabI ACCWGGT 1 cut(s) 3073
MaeI CTAG 2 cut(s) 1596, 1707
MaeII ACGT 5 cut(s) 14, 310, 460, 1414, 2326
MaeIII GTNAC 3 cut(s) 1916, 2249, 3077
MalI GATC 7 cut(s) 55, 300, 336, 1062, 1251, 1494, 2931
MboI GATC 7 cut(s) 53, 298, 334, 1060, 1249, 1492, 2929
MflI RGATCY 2 cut(s) 53, 1492
MhlI GDGCHC 1 cut(s) 854
MlsI TGGCCA 1 cut(s) 84
MluNI TGGCCA 1 cut(s) 84
MlyI GAGTC 1 cut(s) 1781
MmeI TCCRAC 3 cut(s) 709, 3126, 3140
Mox20I TGGCCA 1 cut(s) 84
Mph1103I ATGCAT 1 cut(s) 2095
MroI TCCGGA 1 cut(s) 56
MroXI GAANNNNTTC 1 cut(s) 2371
MscI TGGCCA 1 cut(s) 84
MslI CAYNNNNRTG 2 cut(s) 1521, 2719
Msp20I TGGCCA 1 cut(s) 84
MspA1I CMGCKG 1 cut(s) 1718
MspI CCGG 1 cut(s) 57
MspR9I CCNGG 2 cut(s) 1746, 3075
MvaI CCWGG 2 cut(s) 1746, 3075
MvnI CGCG 1 cut(s) 3009
MwoI GCNNNNNNNGC 2 cut(s) 589, 2099
NdeI CATATG 3 cut(s) 526, 1158, 1740
NdeII GATC 7 cut(s) 53, 298, 334, 1060, 1249, 1492, 2929
NlaIV GGNNCC 3 cut(s) 55, 61, 1294
NmuCI GTSAC 1 cut(s) 3077
NsiI ATGCAT 1 cut(s) 2095
NspI RCATGY 3 cut(s) 194, 378, 2097
NspV TTCGAA 1 cut(s) 2544
PagI TCATGA 1 cut(s) 337
PciI ACATGT 1 cut(s) 374
PcsI WCGNNNNNNNCGW 1 cut(s) 466
PdmI GAANNNNTTC 1 cut(s) 2371
PkrI GCNGC 1 cut(s) 3085
PleI GAGTC 1 cut(s) 1780
PpsI GAGTC 1 cut(s) 1780
PpuMI RGGWCCY 1 cut(s) 1583
PscI ACATGT 1 cut(s) 374
PshBI ATTAAT 2 cut(s) 1575, 2667
PsiI TTATAA 4 cut(s) 543, 777, 941, 1485
Psp124BI GAGCTC 1 cut(s) 854
Psp5II RGGWCCY 1 cut(s) 1583
Psp6I CCWGG 2 cut(s) 1744, 3073
PspGI CCWGG 2 cut(s) 1744, 3073
PspN4I GGNNCC 3 cut(s) 55, 61, 1294
PspPI GGNCC 3 cut(s) 59, 1292, 1583
PspPPI RGGWCCY 1 cut(s) 1583
PstNI CAGNNNCTG 1 cut(s) 2240
PsuI RGATCY 2 cut(s) 53, 1492
PvuII CAGCTG 1 cut(s) 1718
RsaI GTAC 4 cut(s) 90, 1262, 1479, 2159
RsaNI GTAC 4 cut(s) 89, 1261, 1478, 2158
RseI CAYNNNNRTG 2 cut(s) 1521, 2719
SacI GAGCTC 1 cut(s) 854
SalI GTCGAC 1 cut(s) 912
SatI GCNGC 1 cut(s) 3084
Sau3AI GATC 7 cut(s) 53, 298, 334, 1060, 1249, 1492, 2929
Sau96I GGNCC 3 cut(s) 59, 1292, 1583
SchI GAGTC 1 cut(s) 1781
ScrFI CCNGG 2 cut(s) 1746, 3075
SduI GDGCHC 1 cut(s) 854
SexAI ACCWGGT 1 cut(s) 3073
SfaNI GCATC 9 cut(s) 691, 760, 781, 805, 886, 2080, 2174, 2686, 2869
SfcI CTRYAG 3 cut(s) 714, 2103, 3033
SfuI TTCGAA 1 cut(s) 2544
SinI GGWCC 2 cut(s) 59, 1583
SmiI ATTTAAAT 2 cut(s) 1620, 3141
SmiMI CAYNNNNRTG 2 cut(s) 1521, 2719
SmlI CTYRAG 1 cut(s) 1033
SmoI CTYRAG 1 cut(s) 1033
SspI AATATT 6 cut(s) 1246, 1559, 2068, 2848, 2946, 3145
SspMI CTAG 2 cut(s) 1596, 1707
SstI GAGCTC 1 cut(s) 854
StyD4I CCNGG 2 cut(s) 1744, 3073
SwaI ATTTAAAT 2 cut(s) 1620, 3141
TaaI ACNGT 7 cut(s) 150, 539, 923, 1451, 1916, 2236, 3037
TaiI ACGT 5 cut(s) 17, 313, 463, 1417, 2329
TatI WGTACW 3 cut(s) 88, 1260, 2157
TscAI CASTG 3 cut(s) 1740, 1774, 2358
TseFI GTSAC 1 cut(s) 3077
TseI GCWGC 1 cut(s) 3083
Tsp45I GTSAC 1 cut(s) 3077
TspGWI ACGGA 3 cut(s) 563, 2268, 2576
TspRI CASTG 3 cut(s) 1740, 1774, 2358
VpaK11BI GGWCC 2 cut(s) 59, 1583
VspI ATTAAT 2 cut(s) 1575, 2667
XagI CCTNNNNNAGG 1 cut(s) 120
XbaI TCTAGA 1 cut(s) 1706
XceI RCATGY 3 cut(s) 194, 378, 2097
XmiI GTMKAC 1 cut(s) 913
XmnI GAANNNNTTC 1 cut(s) 2371
XspI CTAG 2 cut(s) 1596, 1707
ZraI GACGTC 1 cut(s) 1415
Zsp2I ATGCAT 1 cut(s) 2095
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.