FvH4_4g04470

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000439
Physical Location & Seq
Reverse (-)
3810619 .. 3817194
6576 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g04470.t4

Sequence Viewer

Length: 2727 bp
ATGAAGCCGAGAGACCGCAAAACTATAGATGCCTGTTCTGCAATGAAGACTTTTGGCATTAAACCTGCCGAAACAAAGAAAGCACTTAAGGGACTTCTGAAATTGTATGATAACAACTGGGAGCTTATCGAAGATGAGAATTACAAAGTACTCTTTGATGTTTTAATGCCAGAGGAAGAGAGAGTGGAACCCAAGGGGAAAGAAACTTTGATCATTGAACCGAAGGGAATGACATCACAACAAAAAGTTCCAGCACATGTCAAAGCTGAAGCTTTTGAACTTCCAATCAAGAGATTATTCACAGGACAAGAGGAAAAACATGCATCGTCACTCTCCAAATCTCCCTTGGATTCAAATCCATCAAGAAGAGCACATCAGAATGATGGTGATTCTGGTCCATCTCAGCCATTACTGAGAAGATTCCGCCTAAGATGCCCAGAAAAAGCTTTCATCCGTGAATCAAAGCAGGAATTGAAATCAAAGAAGAATGATGCTCCACCTGATAACAATACTGAAGTTATCGAACTTTCGACTAAGAGATTATACACAAGACAACAGAAAAAACAGGCATTGTCCCTGTCCAAATCATGCATGAGTGATGATGATCTGTTTTCAGATTCTGAAGAAGCTCAGCCACTACTGAAAAGGAGCCGCCTAAGTGGCCAGGAAGGAGAAGCTATGGTCTGCAGCTCAAAGGGTGCGATTTATAATAACATCGAAAGTCCATCAATTGGTAAAACTGAAGTTGTTGAACTTCCAACCAATACATACACAAGACAACAAAAAAAGCAGGCCTCTTCTCTCCCCGAATCTTGTGTGGAAACAAGTCTCTTGACAATGGCACATCAGAATGATGGTTTTATGTTTTATGATTCTGAAGAATCTGAAGAAATTCCATTACTATCTAAAAGTAATCAGGGGAGACACCAAAAAAAGGATGTTTTGGTTCCTGGGAATAAATTGGTTTCTGGCATTCCACCACCAACCAAAAGTCCCATTGTGATCTGTCTTGATAGTTCTTCAGATAGTGATGTTTGTACTGTTGACGAAGAAATATTGGAGGCACAAATAGTAGAGGCACTGGATGTGGAACCATTGACTGTGGACAACATAGCTTGTCTTTCAGATATGTCAGAGATGGATGATGATGAAGACAGCTTGGAGGTACTGAAAGCAGAACCATTGATTGTGGACAGCAGAGGTTGTGTTTTTGATTCATCAAGAGTTGATATTGCATCATCTCTTTCAAAGGGGGAAGTAGATAGTTCTCTGACTCGTAACTCTTTTCCACAGTCTGATATTCATTTTCCAATTATGGATGTGGTGGAAGAGAGAGGCAATAAATCATATCGCGATCGGGAATGCCTTTTGGCCATAGGAACTGATTCAATTACTGATGAAAATGCAAGGTTCAGAGAGGTACCACAGCTAGAAAAGTCGAAGTCACAAGATGTTCTTGCCATGAAAGATGATTATCAAGGCAGTAATTGCAGTGCTCCAGGATTTCCTTCTGAAGTATTTGTATTTCAGAATCTTATCAAGATTGTACCGCATATACCTAGACACATAGATCTTTGTAGATTTGGATGTCTTCACAGTTTAATCGGTTTTCCAATTAAGGATATTGAGAAAGTTTTTGGTACAAGTGGAAAAAGATTACAGGTTCTTCCAGGCCTAAAATCCTCCAAGTTATATAAGGTGCAAACTGCTCAGAGTCACCAGAATTCACAAGTTGTAAAGTTCTGTGTTTATGTAGATGACATAGCAAGAGGTGAAGAAAAACTGAAAATTCCCTTGGAGGGCGGAAGAAATGCTGAAGATCTGTCAAAGTTCTTTTACATACCACAGAATGTAGTTTATAAAGATGCCCACGTGAATTTTGCACTTCGTTGTACATCTAACCAGGCTTGCTGTTCACATTGTTTTGGGAATTGTCTAGCATCACCAGAACCATGTGCCTGTGCTATGCAAAGTGGGGGTGGGTTTGCTTATACACCAAACGGAACACTGAAAATTACTTTTCTGGAAGAATGTTTGTCTGTGATCCACGAACGTAAACAACACCACTACTTCTGTTGTAAAATGTGCCCGCTTGCGAATTTTAGGAAGAAGAAGAGTTCTAATGCATGCAAAGGCCATTTATTACAGAAATTTGTTAAGGAATGTTGGTCTAAATGTGGATGCAACAAAGGCTGTGGGAACCGGATTATTCAACAGGGCATTTCTGTCAAGCTGCAGGTGTTTTTGACTCCCGAAGGGAAAGGGTGGGGTCTCCGAACACTGGAGGACTTGCCGAGAGGGGCTTTTGTCTGTGAGTATGTTGGAGAGATAGTAACAAGCACAGAACTGTTTGAGCGAAATATGCAAAGTGCTGGTAGGAAGCATACATACACAGTGCTCCTAGATGCAAACTGGAGTTCAAAGGGTGTCTTGAAGGATGATGATGAGGCACTTTTCTTAGACGCTACAGTTTATGGAAATGTTGCAAGGTTTATCAACCACAGATGCTCTGATGCTACCTTGGTTTCGATCCCTGTTGAGGTGGAGACTCCTGACCATCACTATTATCATGTTGCCCTTTTCACAACAAGGAATGTTGCTGCTATGGAAGAGCTTACTTGGGACTATGGCATTGGTTTTGATGACCTTGATCATCCTGTGAAGCCATTTCATTGTCTTTGTGGAAGCCAATTCTGTTGTGGCAGCAACCGTAAAGTTCAGGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00310 ko04211 map00310 map04211
Pfam Domains
Protein Families
Pre-SET SET WIYLD

Protein Analysis

909

Amino Acids

101.5

Weight (kDa)

5.98

Isoelectric Point (pI)

52.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WIYLD PF10440 5 - 60 2.8e-16 Ubiquitin-binding WIYLD domain
SET PF00856 755 - 877 2.5e-18 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000439)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380
fragaria_vesca FvH4_2g02250 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_5g31170 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620
malus_domestica MD02G1265700.v1.1 MD04G1231900.v1.1 MD12G1043600.v1.1 MD12G1250000.v1.1
prunus_persica Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1
pyrus_communis pycom02g22720 pycom04g20520
rosa_chinensis RchiOBHm_Chr3g0449441 RchiOBHm_Chr4g0395181 RchiOBHm_Chr6g0245941 RchiOBHm_Chr7g0228041
rosa_laevigata RLG00000001593 RLG00000009641 RLG00000015284 RLG00000025830
rosa_multiflora Rmu_co8250301.1_g000001 Rmu_co8518901.1_g000001 Rmu_sc0004858.1_g000011 Rmu_sc0007224.1_g000005 Rmu_sc0007891.1_g000010 Rmu_sc0019478.1_g000002 Rmu_sc0024829.1_g000001 Rmu_sc0039188.1_g000001
rosa_roxburghii Rroxscaffold_3G00231620 Rroxscaffold_5G00340120 Rroxscaffold_6G00427390 Rroxscaffold_7G00215050
rosa_rugosa Rorug02G0620600 Rorug03G0359100.1 Rorug03G0359200.1 Rorug03G0359300.1 Rorug05G0517600 Rorug05G0517700 Rorug05G0517800 Rorug05G0517900 Rorug05G0518000 Rorug05G0518100 Rorug05G0518200 Rorug05G0518300.1 Rorug07G0245600
rosa_samantha Rh3AG018400 Rh3BG018800 Rh3CG017700 Rh4AG057300 Rh4BG056200 Rh4CG062300 Rh4DG053200 Rh6AG032500 Rh6BG028300 Rh6CG028300 Rh6CG028500 Rh6CG028600 Rh7AG399400 Rh7BG380800 Rh7CG417400 Rh7DG394900
rosa_wichuraiana Rw4G004610 Rw6G002670 Rw7G033190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 708, 1860
AarI CACCTGC 1 cut(s) 2227
Acc36I ACCTGC 2 cut(s) 73, 2227
Acc65I GGTACC 1 cut(s) 1420
AccB1I GGYRCC 1 cut(s) 1420
AccB7I CCANNNNNTGG 1 cut(s) 731
AccII CGCG 1 cut(s) 1353
AciI CCGC 6 cut(s) 16, 424, 652, 1550, 1803, 2090
AclWI GGATC 2 cut(s) 2038, 2524
AcoI YGGCCR 2 cut(s) 661, 1371
AcsI RAATTY 6 cut(s) 891, 1723, 1788, 1876, 2098, 2150
AcuI CTGAAG 9 cut(s) 288, 534, 642, 762, 897, 906, 1005, 1533, 1836
AcvI CACGTG 1 cut(s) 1873
AfaI GTAC 7 cut(s) 150, 1039, 1167, 1422, 1548, 1642, 1894
AfiI CCNNNNNNNGG 5 cut(s) 731, 934, 1799, 2281, 2539
AflII CTTAAG 1 cut(s) 86
AflIII ACRYGT 1 cut(s) 256
AjnI CCWGG 5 cut(s) 663, 949, 1498, 1669, 1902
AjuI GAANNNNNNNTTGG 2 cut(s) 1778, 1810
Alw21I GWGCWC 3 cut(s) 373, 1498, 2400
Alw26I GTCTC 5 cut(s) 6, 833, 916, 2276, 2540
AlwI GGATC 2 cut(s) 2038, 2524
AlwNI CAGNNNCTG 1 cut(s) 620
AoxI GGCC 5 cut(s) 661, 792, 1371, 1672, 2134
ApeKI GCWGC 4 cut(s) 687, 2233, 2600, 2703
ApoI RAATTY 6 cut(s) 891, 1723, 1788, 1876, 2098, 2150
Asp700I GAANNNNTTC 2 cut(s) 891, 1384
Asp718I GGTACC 1 cut(s) 1420
AspS9I GGNCC 1 cut(s) 395
AsuHPI GGTGA 4 cut(s) 398, 1709, 1784, 1935
AvaII GGWCC 1 cut(s) 395
BaeGI GKGCMC 1 cut(s) 2090
BalI TGGCCA 2 cut(s) 663, 1373
BanI GGYRCC 1 cut(s) 1420
BarI GAAGNNNNNNTAC 2 cut(s) 2372, 2404
BbrPI CACGTG 1 cut(s) 1873
BbsI GAAGAC 3 cut(s) 53, 1158, 1583
Bbv12I GWGCWC 3 cut(s) 373, 1498, 2400
BbvI GCAGC 4 cut(s) 699, 2220, 2587, 2715
BccI CCATC 7 cut(s) 367, 377, 406, 733, 848, 1132, 2565
BciT130I CCWGG 5 cut(s) 665, 951, 1500, 1671, 1904
BclI TGATCA 2 cut(s) 210, 2650
BcoDI GTCTC 5 cut(s) 6, 833, 916, 2276, 2540
BfaI CTAG 4 cut(s) 1430, 1560, 1937, 2402
BfmI CTRYAG 4 cut(s) 24, 685, 2234, 2466
BfrI CTTAAG 1 cut(s) 86
BfuAI ACCTGC 2 cut(s) 73, 2227
BglI GCCNNNNNGGC 1 cut(s) 660
BglII AGATCT 2 cut(s) 1570, 1819
BisI GCNGC 5 cut(s) 652, 688, 2234, 2601, 2704
BlpI GCTNAGC 1 cut(s) 630
BlsI GCNGC 5 cut(s) 653, 689, 2235, 2602, 2705
BmcAI AGTACT 1 cut(s) 150
Bme1390I CCNGG 5 cut(s) 665, 951, 1500, 1671, 1904
Bme18I GGWCC 1 cut(s) 395
BmgT120I GGNCC 1 cut(s) 395
BmiI GGNNCC 6 cut(s) 189, 650, 948, 1092, 1422, 2201
BmrFI CCNGG 5 cut(s) 665, 951, 1500, 1671, 1904
BmrI ACTGGG 1 cut(s) 127
BmuI ACTGGG 1 cut(s) 127
BpiI GAAGAC 3 cut(s) 53, 1158, 1583
BpmI CTGGAG 3 cut(s) 1482, 2303, 2434
Bpu1102I GCTNAGC 1 cut(s) 630
BsaAI YACGTR 1 cut(s) 1873
BsaBI GATNNNNATC 3 cut(s) 354, 603, 1473
BsaI GGTCTC 2 cut(s) 6, 2276
BsaJI CCNNGG 5 cut(s) 192, 345, 950, 1794, 2520
BsaWI WCCGGW 1 cut(s) 2202
BsaXI ACNNNNNCTCC 2 cut(s) 2316, 2346
Bsc4I CCNNNNNNNGG 5 cut(s) 731, 934, 1799, 2281, 2539
Bse1I ACTGG 4 cut(s) 122, 1086, 2286, 2417
Bse3DI GCAATG 1 cut(s) 48
Bse8I GATNNNNATC 3 cut(s) 354, 603, 1473
BseBI CCWGG 5 cut(s) 665, 951, 1500, 1671, 1904
BseDI CCNNGG 5 cut(s) 192, 345, 950, 1794, 2520
BseGI GGATG 9 cut(s) 450, 943, 1090, 1147, 1324, 1592, 2186, 2443, 2653
BseJI GATNNNNATC 3 cut(s) 354, 603, 1473
BseLI CCNNNNNNNGG 5 cut(s) 731, 934, 1799, 2281, 2539
BseMI GCAATG 1 cut(s) 48
BseMII CTCAG 4 cut(s) 404, 416, 644, 1724
BseNI ACTGG 4 cut(s) 122, 1086, 2286, 2417
BseSI GKGCMC 1 cut(s) 2090
BseXI GCAGC 4 cut(s) 699, 2220, 2587, 2715
Bsh1236I CGCG 1 cut(s) 1353
Bsh1285I CGRYCG 1 cut(s) 1357
BshFI GGCC 5 cut(s) 663, 794, 1373, 1674, 2136
BshNI GGYRCC 1 cut(s) 1420
BsiEI CGRYCG 1 cut(s) 1357
BsiHKAI GWGCWC 3 cut(s) 373, 1498, 2400
BsiSI CCGG 1 cut(s) 2203
BslFI GGGAC 4 cut(s) 105, 559, 978, 2636
BslI CCNNNNNNNGG 5 cut(s) 731, 934, 1799, 2281, 2539
BsmAI GTCTC 5 cut(s) 6, 833, 916, 2276, 2540
BsmFI GGGAC 4 cut(s) 105, 559, 978, 2636
BsmI GAATGC 2 cut(s) 972, 1367
BsnI GGCC 5 cut(s) 663, 794, 1373, 1674, 2136
Bso31I GGTCTC 2 cut(s) 6, 2276
Bsp1286I GDGCHC 4 cut(s) 373, 1498, 2090, 2400
Bsp1407I TGTACA 1 cut(s) 1892
Bsp143I GATC 9 cut(s) 210, 604, 1002, 1354, 1570, 1819, 2043, 2529, 2650
Bsp1720I GCTNAGC 1 cut(s) 630
Bsp68I TCGCGA 1 cut(s) 1353
BspACI CCGC 6 cut(s) 16, 424, 652, 1550, 1803, 2090
BspANI GGCC 5 cut(s) 663, 794, 1373, 1674, 2136
BspCNI CTCAG 4 cut(s) 405, 415, 643, 1723
BspFNI CGCG 1 cut(s) 1353
BspLI GGNNCC 6 cut(s) 189, 650, 948, 1092, 1422, 2201
BspMAI CTGCAG 2 cut(s) 689, 2238
BspMI ACCTGC 2 cut(s) 73, 2227
BspPI GGATC 2 cut(s) 2038, 2524
BspQI GCTCTTC 2 cut(s) 361, 2604
BspT107I GGYRCC 1 cut(s) 1420
BspTI CTTAAG 1 cut(s) 86
BspTNI GGTCTC 2 cut(s) 6, 2276
BsrDI GCAATG 1 cut(s) 48
BsrGI TGTACA 1 cut(s) 1892
BsrI ACTGG 4 cut(s) 122, 1086, 2286, 2417
BssECI CCNNGG 5 cut(s) 192, 345, 950, 1794, 2520
BssMI GATC 9 cut(s) 210, 604, 1002, 1354, 1570, 1819, 2043, 2529, 2650
BssT1I CCWWGG 4 cut(s) 192, 345, 1794, 2520
Bst2UI CCWGG 5 cut(s) 665, 951, 1500, 1671, 1904
Bst4CI ACNGT 8 cut(s) 1042, 1102, 1293, 1598, 2349, 2395, 2470, 2711
Bst6I CTCTTC 6 cut(s) 171, 361, 802, 1323, 2108, 2604
BstAFI CTTAAG 1 cut(s) 86
BstAPI GCANNNNNTGC 1 cut(s) 1488
BstAUI TGTACA 1 cut(s) 1892
BstBAI YACGTR 1 cut(s) 1873
BstC8I GCNNGC 5 cut(s) 792, 1909, 2090, 2094, 2128
BstDEI CTNAG 8 cut(s) 402, 413, 428, 534, 630, 656, 1710, 2458
BstF5I GGATG 9 cut(s) 450, 943, 1090, 1147, 1324, 1592, 2186, 2443, 2653
BstFNI CGCG 1 cut(s) 1353
BstKTI GATC 9 cut(s) 213, 607, 1005, 1357, 1573, 1822, 2046, 2532, 2653
BstMAI GTCTC 5 cut(s) 6, 833, 916, 2276, 2540
BstMBI GATC 9 cut(s) 210, 604, 1002, 1354, 1570, 1819, 2043, 2529, 2650
BstMCI CGRYCG 1 cut(s) 1357
BstMWI GCNNNNNNNGC 6 cut(s) 38, 432, 660, 1488, 2190, 2362
BstNI CCWGG 5 cut(s) 665, 951, 1500, 1671, 1904
BstNSI RCATGY 3 cut(s) 260, 323, 2130
BstSCI CCNGG 5 cut(s) 663, 949, 1498, 1669, 1902
BstSFI CTRYAG 4 cut(s) 24, 685, 2234, 2466
BstSLI GKGCMC 1 cut(s) 2090
BstUI CGCG 1 cut(s) 1353
BstV1I GCAGC 4 cut(s) 699, 2220, 2587, 2715
BstV2I GAAGAC 3 cut(s) 53, 1158, 1583
BstX2I RGATCY 2 cut(s) 1570, 1819
BstYI RGATCY 2 cut(s) 1570, 1819
BsuRI GGCC 5 cut(s) 663, 794, 1373, 1674, 2136
BtsCI GGATG 9 cut(s) 450, 943, 1090, 1147, 1324, 1592, 2186, 2443, 2653
BtsI GCAGTG 1 cut(s) 1498
BtsIMutI CAGTG 5 cut(s) 1079, 1498, 2006, 2279, 2400
BtuMI TCGCGA 1 cut(s) 1353
BveI ACCTGC 2 cut(s) 73, 2227
Cac8I GCNNGC 5 cut(s) 792, 1909, 2090, 2094, 2128
CaiI CAGNNNCTG 1 cut(s) 620
Cfr13I GGNCC 1 cut(s) 395
CseI GACGC 1 cut(s) 2471
Csp6I GTAC 7 cut(s) 149, 1038, 1166, 1421, 1547, 1641, 1893
CspCI CAANNNNNGTGG 2 cut(s) 2176, 2211
CviAII CATG 9 cut(s) 257, 320, 588, 592, 1462, 1953, 2127, 2570, 2724
CviQI GTAC 7 cut(s) 149, 1038, 1166, 1421, 1547, 1641, 1893
DdeI CTNAG 8 cut(s) 402, 413, 428, 534, 630, 656, 1710, 2458
DpnI GATC 9 cut(s) 212, 606, 1004, 1356, 1572, 1821, 2045, 2531, 2652
DpnII GATC 9 cut(s) 210, 604, 1002, 1354, 1570, 1819, 2043, 2529, 2650
EaeI YGGCCR 2 cut(s) 661, 1371
Eam1104I CTCTTC 6 cut(s) 171, 361, 802, 1323, 2108, 2604
EarI CTCTTC 6 cut(s) 171, 361, 802, 1323, 2108, 2604
EciI GGCGGA 2 cut(s) 413, 1818
Eco130I CCWWGG 4 cut(s) 192, 345, 1794, 2520
Eco147I AGGCCT 2 cut(s) 794, 1674
Eco31I GGTCTC 2 cut(s) 6, 2276
Eco47I GGWCC 1 cut(s) 395
Eco57I CTGAAG 9 cut(s) 288, 534, 642, 762, 897, 906, 1005, 1533, 1836
Eco72I CACGTG 1 cut(s) 1873
EcoRI GAATTC 1 cut(s) 1723
EcoRII CCWGG 5 cut(s) 663, 949, 1498, 1669, 1902
EcoT14I CCWWGG 4 cut(s) 192, 345, 1794, 2520
EcoT22I ATGCAT 3 cut(s) 325, 593, 2128
ErhI CCWWGG 4 cut(s) 192, 345, 1794, 2520
FaeI CATG 9 cut(s) 260, 323, 591, 595, 1465, 1956, 2130, 2573, 2727
FalI AAGNNNNNCTT 4 cut(s) 1440, 1472, 2414, 2446
FaqI GGGAC 4 cut(s) 105, 559, 978, 2636
FatI CATG 9 cut(s) 256, 319, 587, 591, 1461, 1952, 2126, 2569, 2723
FauI CCCGC 1 cut(s) 2097
FbaI TGATCA 2 cut(s) 210, 2650
Fnu4HI GCNGC 5 cut(s) 652, 688, 2234, 2601, 2704
FokI GGATG 9 cut(s) 437, 950, 1097, 1154, 1331, 1599, 2193, 2450, 2640
Fsp4HI GCNGC 5 cut(s) 652, 688, 2234, 2601, 2704
FspBI CTAG 4 cut(s) 1430, 1560, 1937, 2402
GluI GCNGC 5 cut(s) 652, 688, 2234, 2601, 2704
GsuI CTGGAG 3 cut(s) 1482, 2303, 2434
HaeIII GGCC 5 cut(s) 663, 794, 1373, 1674, 2136
HapII CCGG 1 cut(s) 2203
HgaI GACGC 1 cut(s) 2471
Hin1II CATG 9 cut(s) 260, 323, 591, 595, 1465, 1956, 2130, 2573, 2727
HincII GTYRAC 1 cut(s) 1045
HindII GTYRAC 1 cut(s) 1045
HindIII AAGCTT 2 cut(s) 270, 444
HpaII CCGG 1 cut(s) 2203
HphI GGTGA 4 cut(s) 398, 1709, 1784, 1935
Hpy166II GTNNAC 5 cut(s) 1045, 1105, 1192, 1916, 2057
Hpy8I GTNNAC 5 cut(s) 1045, 1105, 1192, 1916, 2057
HpyAV CCTTC 5 cut(s) 217, 662, 1518, 2249, 2428
HpyCH4III ACNGT 8 cut(s) 1042, 1102, 1293, 1598, 2349, 2395, 2470, 2711
HpyCH4IV ACGT 2 cut(s) 1872, 2053
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 432, 660, 1488, 2190, 2362
HpyF3I CTNAG 8 cut(s) 402, 413, 428, 534, 630, 656, 1710, 2458
HpySE526I ACGT 2 cut(s) 1872, 2053
Hsp92II CATG 9 cut(s) 260, 323, 591, 595, 1465, 1956, 2130, 2573, 2727
KpnI GGTACC 1 cut(s) 1424
Ksp22I TGATCA 2 cut(s) 210, 2650
Kzo9I GATC 9 cut(s) 210, 604, 1002, 1354, 1570, 1819, 2043, 2529, 2650
LguI GCTCTTC 2 cut(s) 361, 2604
LmnI GCTCC 5 cut(s) 121, 499, 648, 1501, 2403
Lsp1109I GCAGC 4 cut(s) 699, 2220, 2587, 2715
MaeI CTAG 4 cut(s) 1430, 1560, 1937, 2402
MaeII ACGT 2 cut(s) 1872, 2053
MaeIII GTNAC 5 cut(s) 327, 1277, 1443, 1715, 2332
MalI GATC 9 cut(s) 212, 606, 1004, 1356, 1572, 1821, 2045, 2531, 2652
MboI GATC 9 cut(s) 210, 604, 1002, 1354, 1570, 1819, 2043, 2529, 2650
MfeI CAATTG 1 cut(s) 729
MflI RGATCY 2 cut(s) 1570, 1819
MhlI GDGCHC 4 cut(s) 373, 1498, 2090, 2400
MlsI TGGCCA 2 cut(s) 663, 1373
MluNI TGGCCA 2 cut(s) 663, 1373
MlyI GAGTC 4 cut(s) 1267, 1723, 2242, 2542
MmeI TCCRAC 2 cut(s) 782, 2302
Mox20I TGGCCA 2 cut(s) 663, 1373
Mph1103I ATGCAT 3 cut(s) 325, 593, 2128
MroXI GAANNNNTTC 2 cut(s) 891, 1384
MscI TGGCCA 2 cut(s) 663, 1373
MseI TTAA 6 cut(s) 60, 87, 164, 1601, 1617, 2157
MslI CAYNNNNRTG 2 cut(s) 378, 849
Msp20I TGGCCA 2 cut(s) 663, 1373
MspCI CTTAAG 1 cut(s) 86
MspI CCGG 1 cut(s) 2203
MspR9I CCNGG 5 cut(s) 665, 951, 1500, 1671, 1904
MunI CAATTG 1 cut(s) 729
Mva1269I GAATGC 2 cut(s) 972, 1367
MvaI CCWGG 5 cut(s) 665, 951, 1500, 1671, 1904
MvnI CGCG 1 cut(s) 1353
MwoI GCNNNNNNNGC 6 cut(s) 38, 432, 660, 1488, 2190, 2362
NdeII GATC 9 cut(s) 210, 604, 1002, 1354, 1570, 1819, 2043, 2529, 2650
NlaIII CATG 9 cut(s) 260, 323, 591, 595, 1465, 1956, 2130, 2573, 2727
NlaIV GGNNCC 6 cut(s) 189, 650, 948, 1092, 1422, 2201
NmeAIII GCCGAG 2 cut(s) 33, 2319
NmuCI GTSAC 3 cut(s) 327, 1443, 1715
NruI TCGCGA 1 cut(s) 1353
NsiI ATGCAT 3 cut(s) 325, 593, 2128
NspI RCATGY 3 cut(s) 260, 323, 2130
PaeI GCATGC 1 cut(s) 2130
PaqCI CACCTGC 1 cut(s) 2227
PceI AGGCCT 2 cut(s) 794, 1674
PciI ACATGT 1 cut(s) 256
PciSI GCTCTTC 2 cut(s) 361, 2604
PctI GAATGC 2 cut(s) 972, 1367
PdmI GAANNNNTTC 2 cut(s) 891, 1384
PflMI CCANNNNNTGG 1 cut(s) 731
PfoI TCCNGGA 1 cut(s) 1498
PkrI GCNGC 5 cut(s) 653, 689, 2235, 2602, 2705
Ple19I CGATCG 1 cut(s) 1357
PleI GAGTC 4 cut(s) 1267, 1722, 2242, 2542
PmaCI CACGTG 1 cut(s) 1873
PmlI CACGTG 1 cut(s) 1873
PpsI GAGTC 4 cut(s) 1267, 1722, 2242, 2542
Ppu21I YACGTR 1 cut(s) 1873
PscI ACATGT 1 cut(s) 256
PsiI TTATAA 2 cut(s) 708, 1860
Psp6I CCWGG 5 cut(s) 663, 949, 1498, 1669, 1902
PspCI CACGTG 1 cut(s) 1873
PspGI CCWGG 5 cut(s) 663, 949, 1498, 1669, 1902
PspN4I GGNNCC 6 cut(s) 189, 650, 948, 1092, 1422, 2201
PspPI GGNCC 1 cut(s) 395
PstI CTGCAG 2 cut(s) 689, 2238
PstNI CAGNNNCTG 1 cut(s) 620
PsuI RGATCY 2 cut(s) 1570, 1819
PvuI CGATCG 1 cut(s) 1357
RruI TCGCGA 1 cut(s) 1353
RsaI GTAC 7 cut(s) 150, 1039, 1167, 1422, 1548, 1642, 1894
RsaNI GTAC 7 cut(s) 149, 1038, 1166, 1421, 1547, 1641, 1893
RseI CAYNNNNRTG 2 cut(s) 378, 849
SapI GCTCTTC 2 cut(s) 361, 2604
SaqAI TTAA 6 cut(s) 60, 87, 164, 1601, 1617, 2157
SatI GCNGC 5 cut(s) 652, 688, 2234, 2601, 2704
Sau3AI GATC 9 cut(s) 210, 604, 1002, 1354, 1570, 1819, 2043, 2529, 2650
Sau96I GGNCC 1 cut(s) 395
ScaI AGTACT 1 cut(s) 150
SchI GAGTC 4 cut(s) 1267, 1723, 2242, 2542
ScrFI CCNGG 5 cut(s) 665, 951, 1500, 1671, 1904
SduI GDGCHC 4 cut(s) 373, 1498, 2090, 2400
SfcI CTRYAG 4 cut(s) 24, 685, 2234, 2466
SinI GGWCC 1 cut(s) 395
SmiMI CAYNNNNRTG 2 cut(s) 378, 849
SmlI CTYRAG 1 cut(s) 86
SmoI CTYRAG 1 cut(s) 86
SphI GCATGC 1 cut(s) 2130
SseBI AGGCCT 2 cut(s) 794, 1674
SsiI CCGC 6 cut(s) 16, 424, 652, 1550, 1803, 2090
SspI AATATT 1 cut(s) 1056
SspMI CTAG 4 cut(s) 1430, 1560, 1937, 2402
StuI AGGCCT 2 cut(s) 794, 1674
StyD4I CCNGG 5 cut(s) 663, 949, 1498, 1669, 1902
StyI CCWWGG 4 cut(s) 192, 345, 1794, 2520
TaaI ACNGT 8 cut(s) 1042, 1102, 1293, 1598, 2349, 2395, 2470, 2711
TaiI ACGT 2 cut(s) 1875, 2056
TaqI TCGA 6 cut(s) 129, 522, 530, 717, 1439, 2528
TatI WGTACW 3 cut(s) 148, 1037, 1892
TauI GCSGC 1 cut(s) 654
Tru1I TTAA 6 cut(s) 60, 87, 164, 1601, 1617, 2157
Tru9I TTAA 6 cut(s) 60, 87, 164, 1601, 1617, 2157
TscAI CASTG 5 cut(s) 1086, 1498, 2013, 2286, 2400
TseFI GTSAC 3 cut(s) 327, 1443, 1715
TseI GCWGC 4 cut(s) 687, 2233, 2600, 2703
Tsp45I GTSAC 3 cut(s) 327, 1443, 1715
TspDTI ATGAA 9 cut(s) 17, 59, 439, 1164, 1206, 1292, 1413, 1478, 2660
TspGWI ACGGA 2 cut(s) 443, 2016
TspRI CASTG 5 cut(s) 1086, 1498, 2013, 2286, 2400
Van91I CCANNNNNTGG 1 cut(s) 731
Vha464I CTTAAG 1 cut(s) 86
VpaK11BI GGWCC 1 cut(s) 395
XapI RAATTY 6 cut(s) 891, 1723, 1788, 1876, 2098, 2150
XceI RCATGY 3 cut(s) 260, 323, 2130
XcmI CCANNNNNNNNNTGG 2 cut(s) 343, 2696
XmnI GAANNNNTTC 2 cut(s) 891, 1384
XspI CTAG 4 cut(s) 1430, 1560, 1937, 2402
ZrmI AGTACT 1 cut(s) 150
Zsp2I ATGCAT 3 cut(s) 325, 593, 2128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.