Rorug07G0245600

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000439
Physical Location & Seq
Reverse (-)
22729371 .. 22737191
7821 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0245600.1

Sequence Viewer

Length: 3789 bp
ATGACTTCAAAGCCGGATACATTTCCCTCTTCCGGCAACGTTAACGGCGATCATGCAGACGACGACGAAATGTTGAAGTTGAAGAAGAAGAAGGAGAAACAAGAAGAAGAGAAAGAGAACAAGAAGCGGAACGTTCCATTACTGAAGCTCTTCTCTTTCGCTGATTCGTACGACTGCGTTTTGATGGCAATCGGATCTATCGGGGCCTGTGTTCATGGCGCTTCAGTCCCTGTCTTCTTTATTTTCTTCGGAAAAATGATAAACGTTATTGGCCTTGCGTATCTCTTTCCCAAACAAGCTTCCTCTAAAGTAGCCAAGTACTCCTTGGATTTTGTATATCTCAGTGTAGCTATATTGTTTTCATCATGGACCGAGGTGGCTTGTTGGATGCACACTGGGGAAAGACAAGCAGCGAAAATGAGGATGGCGTATTTGAGAGCCATGCTGAATCAAGATATTAGTCTTTTCGACACTGAAGCTTCTACTGGGCAAGTCATTTCTGCAATTACAAGTGACATTATTGTTGTTCAAGATGCTCTTTCTGAGAAGGTGGGGAACTTCATGCACTACATAAGCAGATTTCTTGCAGGATTCACAATTGGGTTTGTTAGGGTTTGGCAAATTAGTCTGGTCACTCTCTCCATTGTACCCATGATTGCCCTTGCTGGCGGTGTCTATGCCTTTGTCACTATTGGCCTCATTGCTAGGGTCAGAAAGTCCTATATCAAGGCTGGTGAAATTGCTGAAGAGGTGATAGGAAATGTAAGGACAGTGCAAGCATTTGCAGCAGAAGAAAGGGCTGTAAGGCAGTACAAGACAGCTCTGTTGGGTACATACAAGTATGGGAAGAAAGCAGGACTGGCCAAGGGTTTGGGGCTGGGCTCCCTGCACTGCACCCTTTTTCTTTCATGGGCATTACTCGTTTGGTTCACTAGCGTTGTTGTGCACAAGAATATTGCTAATGGCGGCGAGTCTTTCACCACTATGCTTAATGTTGTTATTGCTGGCCTGTCACTAGGGCAAGCAGCGCCTGACATCTCTGCATTCATACGAGCCAAGGCAGCTGCGTATCCCATATTTGAGATGATAGAGAGGAACACAGTGAACCAATCCAGCAGCAAAACTGGCAGGAAACTGGACAAACTTGAGGGGCATATCCAATTTAAGGATGTATCTTTTAGCTACCCATCTCGTATAGATGTTAGTATCTTCAATAAGCTCAATCTTGATATCCCTGCCGGGAAGATTGTAGCCCTTGTGGGAGGAAGTGGTTCCGGCAAGAGTACAGTTATATCTTTGATTGAACGATTCTATGAGCCACTTGCTGGCCAGGTGTTGTTAGATGGAAATAATATAAGCGAACTTGACCTCAAATGGATGAGGCAACAAATTGGGCTGGTCAATCAGGAGCCTGCTCTTTTTGCAACAAGCATTAGGGAAAATATTCTCTATGGAAAAGGTGATGCTTCAATGGATGATATCAAACATGCAGCTAAACTTTCAGAGGCTCTTTCTTTCATAAATAACCTCCCAGAGAGATTTGAAACTCAGGTTGGTGAGAGAGGCATACAACTCTCGGGAGGACAAAAGCAAAGGATTGCAATAGCACGTGCAATAGTGAAGAATCCATCAATTCTTCTATTGGATGAAGCAACGAGCGCACTGGATGCAGAGTCTGAGAAGAGTGTGCAGGAGGCACTTGATCGTGCCATGGTAGGGCGAACGACAGTAGTGGTGGCACATCGTCTTTCCACTGTCAGGAATGCAGATCTTATTGCTGTTGTTCAAGAGGGGAAGATAGTTGAAACTGGGAGCCATGAGGAGCTAATTACAAACCCCAACGGTGTCTATGCAGCACTTGTTCATCTACAAGAGACAGCTTCTTTGCAACGCCACCCCTCATTTGGTCCTAACATAGGACAACCACTAAGCATAAGGTATTCACGGGAGTTATCTCGCACTACAGCAAGTTTTGGTGCCAGCTTTCGCTCTGATAAAGAATCTCTTGGCCGTCCTGGTGGTGATGGAACAGAGATTAAGTCAAGACATGTTTCAGCTAGTAGACTGTATTCCATGATCCGTCCAGACTGGCACTATGGGGTGATTGGTACCATTGGCGCCCTTATTGCTGGAGCTCAGATGCCTCTTTTTGCTCTCGGGGTCTCTCAGGCTCTAGTTTCCTATTACATGGACTGGGAAACAACATGCCGTGAGGTTAAAAAGATCTCTTTACTCTTCTGTGGGGCTGCAGTGGTAACTGTCATTGTTCATGCTGTAGCTCATCTTTGTTTTGGAACTATGGGAGAGCGACTCACTCTTCGAGTTAGAGAGAAGATGTTTTCTGCAATTTTGAGGAATGAGATCGGATGGTTTGATGATACAAACAACACCAGTTCTATGCTTTCATCGCGTCTAGAAAGTGATGCAACTTTATTACGAACTATTGTTGTTGATCGCGCAACAATTCTTATACAGAATGTGGGTTTGATAGTTGCCTCATTTATCATTGCCTTCATCTTGAACTGGAGAATCACATTAGTGGTCTTAGCCACATATCCTTTGATCATTAGTGGTCACATCAGCGAGAAACTTTTCATGAAAGGCTATGGTGGCAACTTGAGCACAGCATATCTGAAAGCTAACATGCTAGCTGGGGAAGCTGTAAGTAACATCCGCACTGTTGCTGCATTTTGTTCTGAGGAGAAGGTCATCGACCTATATGCTCGTGAGCTTGTTGAGCCTTCTAGACGTTCATTTACTCGTGGTCAGATTGCTGGCATATTCTATGGTGTATCTCAGTTCTTCATATTCTCATCCTATGGCCTGGCCTTGTGGTATGGTTCTGTTTTGATGGAAAAGGAGCTTGCTAGCTTTAAATCTGTCATGAAATCATTCTTTGTTTTGATTGTAACGGCATTAGCAATGGGTGAGACTTTAGCACTTGCCCCAGATCTTTTAAAAGGGAACCAAATGGTGGCATCAGTCTTTGATGTAACAGATCGTAGAACAGAAGTCCTAGGGGACATAGGAGAAGAGGTTACAAAAGTGGAAGGGACAATTGAGTTAAGAGGTGTTCAATTTAGCTACCCATCTAGACCAGACGTAGTGCTTTTCAGGGACTTCAATTTGAAAGTTCATTCAGGCAAGACTATGGCATTGGTGGGGCAAAGTGGTTCTGGTAAAAGCTCTGTGATTTCTCTAATTCTCAGATTTTATGATCCGACAGCTGGGAAAGTTATGGTAGATGGGAAAGACATCAAGAAACTCAATCTCAAATCTCTTCGAAGACACATTGGCCTGGTTCAACAAGAACCAGCTCTCTTTGCCACATCAATTTATGAAAACATCCTTTATGGAAAAGAAGGAGCTTCTGAAGCAGAAGTAATTGAAGCAGCCAAGCTTGCCAATGCACACAGTTTCATTAGTGCCCTTCCTGAGGGCTACTCCACTAAAGTTGGGGAGCGAGGGGTGCAACTATCTGGTGGCCAAAGGCAAAGGGTGGCCATTGCCCGAGCAGTTCTAAAGAACCCTGAAATTTTGTTACTAGATGAGGCGACCAGCGCTCTAGATGTGGAGTCTGAGCGTGTGGTGCAACAAGCTCTTGATAGATTGATGAAGACCCGTACAACGATAATGGTGGCACATAGGCTGTCCACAATAAAAAATGCAGATGAAATTTCAGTCATACAAGATGGGAAGATTGTAGAGCAAGGAAGTCATTCAACTCTTATAGAGAACAGAAATGGAGCATATTACAAGTTAATAAACATTCAGCAGCAGCAGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00310 ko04211 map00310 map04211
Pfam Domains
Protein Families
Pre-SET SET WIYLD

Protein Analysis

1262

Amino Acids

138.28

Weight (kDa)

8.93

Isoelectric Point (pI)

34.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 64 - 334 8.4e-44 ABC transporter transmembrane region
ABC_tran PF00005 405 - 553 2.4e-34 ABC transporter
ABC_membrane PF00664 702 - 972 6.3e-46 ABC transporter transmembrane region
ABC_tran PF00005 1039 - 1187 1.6e-34 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000439)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380
fragaria_vesca FvH4_2g02250 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_5g31170 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620
malus_domestica MD02G1265700.v1.1 MD04G1231900.v1.1 MD12G1043600.v1.1 MD12G1250000.v1.1
prunus_persica Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1
pyrus_communis pycom02g22720 pycom04g20520
rosa_chinensis RchiOBHm_Chr3g0449441 RchiOBHm_Chr4g0395181 RchiOBHm_Chr6g0245941 RchiOBHm_Chr7g0228041
rosa_laevigata RLG00000001593 RLG00000009641 RLG00000015284 RLG00000025830
rosa_multiflora Rmu_co8250301.1_g000001 Rmu_co8518901.1_g000001 Rmu_sc0004858.1_g000011 Rmu_sc0007224.1_g000005 Rmu_sc0007891.1_g000010 Rmu_sc0019478.1_g000002 Rmu_sc0024829.1_g000001 Rmu_sc0039188.1_g000001
rosa_roxburghii Rroxscaffold_3G00231620 Rroxscaffold_5G00340120 Rroxscaffold_6G00427390 Rroxscaffold_7G00215050
rosa_rugosa Rorug02G0620600 Rorug03G0359100.1 Rorug03G0359200.1 Rorug03G0359300.1 Rorug05G0517600 Rorug05G0517700 Rorug05G0517800 Rorug05G0517900 Rorug05G0518000 Rorug05G0518100 Rorug05G0518200 Rorug05G0518300.1 Rorug07G0245600
rosa_samantha Rh3AG018400 Rh3BG018800 Rh3CG017700 Rh4AG057300 Rh4BG056200 Rh4CG062300 Rh4DG053200 Rh6AG032500 Rh6BG028300 Rh6CG028300 Rh6CG028500 Rh6CG028600 Rh7AG399400 Rh7BG380800 Rh7CG417400 Rh7DG394900
rosa_wichuraiana Rw4G004610 Rw6G002670 Rw7G033190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 2108
AccB1I GGYRCC 3 cut(s) 1976, 2108, 2117
AccB7I CCANNNNNTGG 2 cut(s) 1325, 2974
AccI GTMKAC 1 cut(s) 2062
AccII CGCG 2 cut(s) 2410, 2457
AciI CCGC 4 cut(s) 127, 669, 966, 2674
AclI AACGTT 3 cut(s) 39, 132, 264
AclWI GGATC 3 cut(s) 202, 2071, 3212
AcoI YGGCCR 5 cut(s) 861, 1327, 2008, 3484, 3501
AcsI RAATTY 2 cut(s) 3534, 3675
AcuI CTGAAG 5 cut(s) 164, 207, 495, 765, 3393
AcvI CACGTG 1 cut(s) 1610
AcyI GRCGYC 1 cut(s) 2118
AfaI GTAC 8 cut(s) 170, 320, 648, 812, 832, 1285, 2110, 3625
AfeI AGCGCT 1 cut(s) 3562
AflIII ACRYGT 1 cut(s) 2047
AjnI CCWGG 4 cut(s) 1329, 2014, 2823, 3297
AjuI GAANNNNNNNTTGG 2 cut(s) 1536, 1568
AleI CACNNNNGTG 1 cut(s) 2537
Alw21I GWGCWC 3 cut(s) 948, 2137, 2624
Alw26I GTCTC 3 cut(s) 1868, 2167, 2924
Alw44I GTGCAC 1 cut(s) 944
AlwI GGATC 3 cut(s) 202, 2071, 3212
AlwNI CAGNNNCTG 3 cut(s) 230, 1031, 1676
Ama87I CYCGRG 3 cut(s) 1576, 2156, 3510
Aor51HI AGCGCT 1 cut(s) 3562
ApaLI GTGCAC 1 cut(s) 944
ApoI RAATTY 2 cut(s) 3534, 3675
ArsI GACNNNNNNTTYG 4 cut(s) 1867, 1899, 2301, 2333
Asp700I GAANNNNTTC 6 cut(s) 149, 1270, 1443, 2591, 2891, 3718
Asp718I GGTACC 1 cut(s) 2108
AspA2I CCTAGG 1 cut(s) 3016
AspLEI GCGC 6 cut(s) 221, 1030, 1661, 2120, 2459, 3563
AspS9I GGNCC 3 cut(s) 204, 369, 1907
AsuC2I CCSGG 1 cut(s) 1240
AsuHPI GGTGA 8 cut(s) 746, 763, 970, 1472, 1568, 2033, 2113, 2939
AsuII TTCGAA 1 cut(s) 3283
AsuNHI GCTAGC 2 cut(s) 2647, 2867
AvaI CYCGRG 3 cut(s) 1576, 2156, 3510
AvaII GGWCC 2 cut(s) 369, 1907
AvrII CCTAGG 1 cut(s) 3016
AxyI CCTNAGG 1 cut(s) 3435
BaeGI GKGCMC 2 cut(s) 948, 3430
BalI TGGCCA 4 cut(s) 863, 1329, 3486, 3503
BanI GGYRCC 3 cut(s) 1976, 2108, 2117
BanII GRGCYC 2 cut(s) 884, 2137
BauI CACGAG 2 cut(s) 2724, 2760
BbrPI CACGTG 1 cut(s) 1610
BbsI GAAGAC 3 cut(s) 226, 3292, 3623
Bbv12I GWGCWC 3 cut(s) 948, 2137, 2624
BceAI ACGGC 4 cut(s) 61, 1995, 2193, 2928
BcgI CGANNNNNNTGC 2 cut(s) 2702, 2736
BciT130I CCWGG 4 cut(s) 1331, 2016, 2825, 3299
BciVI GTATCC 2 cut(s) 10, 1080
BclI TGATCA 1 cut(s) 2562
BcnI CCSGG 1 cut(s) 1240
BcoDI GTCTC 3 cut(s) 1868, 2167, 2924
BfmI CTRYAG 3 cut(s) 1962, 2247, 2274
BfoI RGCGCY 4 cut(s) 222, 1031, 2121, 3564
BfuI GTATCC 2 cut(s) 10, 1080
BglII AGATCT 3 cut(s) 1768, 2223, 2950
BlnI CCTAGG 1 cut(s) 3016
BmcAI AGTACT 1 cut(s) 320
Bme1390I CCNGG 5 cut(s) 1240, 1331, 2016, 2825, 3299
Bme18I GGWCC 2 cut(s) 369, 1907
BmeT110I CYCGRG 3 cut(s) 1576, 2156, 3510
BmgT120I GGNCC 3 cut(s) 204, 369, 1907
BmiI GGNNCC 9 cut(s) 205, 883, 1273, 1410, 1814, 1978, 2110, 2119, 2966
BmrFI CCNGG 5 cut(s) 1240, 1331, 2016, 2825, 3299
BmrI ACTGGG 4 cut(s) 405, 495, 1818, 2203
BmsI GCATC 7 cut(s) 378, 523, 1453, 1657, 2130, 2413, 2987
BmtI GCTAGC 2 cut(s) 2651, 2871
BmuI ACTGGG 4 cut(s) 405, 495, 1818, 2203
BpiI GAAGAC 3 cut(s) 226, 3292, 3623
BplI GAGNNNNNCTC 4 cut(s) 2295, 2327, 3428, 3460
BpmI CTGGAG 2 cut(s) 2151, 2545
Bpu14I TTCGAA 1 cut(s) 3283
BpuEI CTTGAG 2 cut(s) 1166, 2638
BpuMI CCSGG 1 cut(s) 1240
BsaAI YACGTR 1 cut(s) 1610
BsaBI GATNNNNATC 1 cut(s) 188
BsaHI GRCGYC 1 cut(s) 2118
BsaI GGTCTC 1 cut(s) 2167
BsaJI CCNNGG 6 cut(s) 324, 372, 864, 1056, 1710, 3016
BsaXI ACNNNNNCTCC 2 cut(s) 3021, 3051
Bse21I CCTNAGG 1 cut(s) 3435
Bse3DI GCAATG 4 cut(s) 699, 2505, 2928, 3504
Bse8I GATNNNNATC 1 cut(s) 188
BseBI CCWGG 4 cut(s) 1331, 2016, 2825, 3299
BseDI CCNNGG 6 cut(s) 324, 372, 864, 1056, 1710, 3016
BseJI GATNNNNATC 1 cut(s) 188
BseMI GCAATG 4 cut(s) 699, 2505, 2928, 3504
BseRI GAGGAG 2 cut(s) 1835, 2714
BseSI GKGCMC 2 cut(s) 948, 3430
BseYI CCCAGC 3 cut(s) 877, 2651, 3227
BsgI GTGCAG 3 cut(s) 872, 877, 1709
Bsh1236I CGCG 2 cut(s) 2410, 2457
BshNI GGYRCC 3 cut(s) 1976, 2108, 2117
BsiHKAI GWGCWC 3 cut(s) 948, 2137, 2624
BsiHKCI CYCGRG 3 cut(s) 1576, 2156, 3510
BsiSI CCGG 4 cut(s) 14, 33, 1239, 1275
BsiWI CGTACG 1 cut(s) 168
BslFI GGGAC 4 cut(s) 212, 3035, 3067, 3131
BsmAI GTCTC 3 cut(s) 1868, 2167, 2924
BsmFI GGGAC 4 cut(s) 212, 3035, 3067, 3131
BsmI GAATGC 2 cut(s) 1043, 1768
Bso31I GGTCTC 1 cut(s) 2167
BsoBI CYCGRG 3 cut(s) 1576, 2156, 3510
Bsp119I TTCGAA 1 cut(s) 3283
Bsp1286I GDGCHC 5 cut(s) 884, 948, 2137, 2624, 3430
Bsp19I CCATGG 1 cut(s) 1710
BspACI CCGC 4 cut(s) 127, 669, 966, 2674
BspFNI CGCG 2 cut(s) 2410, 2457
BspHI TCATGA 2 cut(s) 2595, 2883
BspLI GGNNCC 9 cut(s) 205, 883, 1273, 1410, 1814, 1978, 2110, 2119, 2966
BspMAI CTGCAG 1 cut(s) 2251
BspOI GCTAGC 2 cut(s) 2651, 2871
BspPI GGATC 3 cut(s) 202, 2071, 3212
BspQI GCTCTTC 1 cut(s) 155
BspT104I TTCGAA 1 cut(s) 3283
BspT107I GGYRCC 3 cut(s) 1976, 2108, 2117
BspTNI GGTCTC 1 cut(s) 2167
BsrDI GCAATG 4 cut(s) 699, 2505, 2928, 3504
BssECI CCNNGG 6 cut(s) 324, 372, 864, 1056, 1710, 3016
BssNI GRCGYC 1 cut(s) 2118
BssSI CACGAG 2 cut(s) 2724, 2760
BssT1I CCWWGG 5 cut(s) 324, 864, 1056, 1710, 3016
Bst2BI CACGAG 2 cut(s) 2724, 2760
Bst2UI CCWGG 4 cut(s) 1331, 2016, 2825, 3299
Bst6I CTCTTC 9 cut(s) 34, 102, 155, 741, 1676, 2240, 2322, 3027, 3285
BstACI GRCGYC 1 cut(s) 2118
BstAPI GCANNNNNTGC 1 cut(s) 1667
BstBAI YACGTR 1 cut(s) 1610
BstBI TTCGAA 1 cut(s) 3283
BstDSI CCRYGG 1 cut(s) 1710
BstENI CCTNNNNNAGG 2 cut(s) 1914, 3434
BstFNI CGCG 2 cut(s) 2410, 2457
BstH2I RGCGCY 4 cut(s) 222, 1031, 2121, 3564
BstHHI GCGC 6 cut(s) 221, 1030, 1661, 2120, 2459, 3563
BstMAI GTCTC 3 cut(s) 1868, 2167, 2924
BstNI CCWGG 4 cut(s) 1331, 2016, 2825, 3299
BstNSI RCATGY 4 cut(s) 1490, 2051, 2208, 2647
BstSCI CCNGG 5 cut(s) 1238, 1329, 2014, 2823, 3297
BstSFI CTRYAG 3 cut(s) 1962, 2247, 2274
BstSLI GKGCMC 2 cut(s) 948, 3430
BstUI CGCG 2 cut(s) 2410, 2457
BstV2I GAAGAC 3 cut(s) 226, 3292, 3623
BstX2I RGATCY 4 cut(s) 194, 1768, 2223, 2950
BstXI CCANNNNNNTGG 1 cut(s) 871
BstYI RGATCY 4 cut(s) 194, 1768, 2223, 2950
Bsu36I CCTNAGG 1 cut(s) 3435
BsuI GTATCC 2 cut(s) 10, 1080
BtgI CCRYGG 1 cut(s) 1710
BtgZI GCGATG 1 cut(s) 2391
BtsI GCAGTG 2 cut(s) 889, 2256
CaiI CAGNNNCTG 3 cut(s) 230, 1031, 1676
CciI TCATGA 2 cut(s) 2595, 2883
CfoI GCGC 6 cut(s) 221, 1030, 1661, 2120, 2459, 3563
Cfr13I GGNCC 3 cut(s) 204, 369, 1907
CseI GACGC 1 cut(s) 2399
Csp6I GTAC 8 cut(s) 169, 319, 647, 811, 831, 1284, 2109, 3624
CspCI CAANNNNNGTGG 2 cut(s) 3436, 3471
CviQI GTAC 8 cut(s) 169, 319, 647, 811, 831, 1284, 2109, 3624
DinI GGCGCC 1 cut(s) 2119
DraI TTTAAA 2 cut(s) 2875, 2958
EaeI YGGCCR 5 cut(s) 861, 1327, 2008, 3484, 3501
Eam1104I CTCTTC 9 cut(s) 34, 102, 155, 741, 1676, 2240, 2322, 3027, 3285
EarI CTCTTC 9 cut(s) 34, 102, 155, 741, 1676, 2240, 2322, 3027, 3285
Ecl136II GAGCTC 1 cut(s) 2135
Eco130I CCWWGG 5 cut(s) 324, 864, 1056, 1710, 3016
Eco24I GRGCYC 2 cut(s) 884, 2137
Eco31I GGTCTC 1 cut(s) 2167
Eco32I GATATC 2 cut(s) 1231, 1480
Eco47I GGWCC 2 cut(s) 369, 1907
Eco47III AGCGCT 1 cut(s) 3562
Eco53kI GAGCTC 1 cut(s) 2135
Eco57I CTGAAG 5 cut(s) 164, 207, 495, 765, 3393
Eco72I CACGTG 1 cut(s) 1610
Eco81I CCTNAGG 1 cut(s) 3435
Eco88I CYCGRG 3 cut(s) 1576, 2156, 3510
EcoICRI GAGCTC 1 cut(s) 2135
EcoNI CCTNNNNNAGG 2 cut(s) 1914, 3434
EcoO109I RGGNCCY 1 cut(s) 204
EcoRII CCWGG 4 cut(s) 1329, 2014, 2823, 3297
EcoRV GATATC 2 cut(s) 1231, 1480
EcoT14I CCWWGG 5 cut(s) 324, 864, 1056, 1710, 3016
EcoT38I GRGCYC 2 cut(s) 884, 2137
EgeI GGCGCC 1 cut(s) 2119
EheI GGCGCC 1 cut(s) 2119
ErhI CCWWGG 5 cut(s) 324, 864, 1056, 1710, 3016
FalI AAGNNNNNCTT 6 cut(s) 308, 340, 522, 554, 1989, 2021
FaqI GGGAC 4 cut(s) 212, 3035, 3067, 3131
FbaI TGATCA 1 cut(s) 2562
FblI GTMKAC 1 cut(s) 2062
FriOI GRGCYC 2 cut(s) 884, 2137
GlaI GCGC 6 cut(s) 220, 1029, 1660, 2119, 2458, 3562
GsaI CCCAGC 3 cut(s) 881, 2655, 3231
GsuI CTGGAG 2 cut(s) 2151, 2545
HaeII RGCGCY 4 cut(s) 222, 1031, 2121, 3564
HapII CCGG 4 cut(s) 14, 33, 1239, 1275
HgaI GACGC 1 cut(s) 2399
HhaI GCGC 6 cut(s) 221, 1030, 1661, 2120, 2459, 3563
Hin1I GRCGYC 1 cut(s) 2118
Hin6I GCGC 6 cut(s) 219, 1028, 1659, 2118, 2457, 3561
HinP1I GCGC 6 cut(s) 219, 1028, 1659, 2118, 2457, 3561
HincII GTYRAC 1 cut(s) 43
HindII GTYRAC 1 cut(s) 43
HindIII AAGCTT 3 cut(s) 297, 477, 3398
HpaI GTTAAC 1 cut(s) 43
HpaII CCGG 4 cut(s) 14, 33, 1239, 1275
HphI GGTGA 8 cut(s) 746, 763, 970, 1472, 1568, 2033, 2113, 2939
Hpy166II GTNNAC 6 cut(s) 43, 930, 946, 1105, 2063, 3654
Hpy8I GTNNAC 6 cut(s) 43, 930, 946, 1105, 2063, 3654
Hpy99I CGWCG 2 cut(s) 65, 68
HpyAV CCTTC 8 cut(s) 85, 541, 2521, 2698, 2751, 3044, 3356, 3440
HpyCH4IV ACGT 6 cut(s) 39, 132, 264, 1609, 2749, 3102
HpySE526I ACGT 6 cut(s) 39, 132, 264, 1609, 2749, 3102
Hsp92I GRCGYC 1 cut(s) 2118
HspAI GCGC 6 cut(s) 219, 1028, 1659, 2118, 2457, 3561
KasI GGCGCC 1 cut(s) 2117
KpnI GGTACC 1 cut(s) 2112
Ksp22I TGATCA 1 cut(s) 2562
KspAI GTTAAC 1 cut(s) 43
LguI GCTCTTC 1 cut(s) 155
LmnI GCTCC 9 cut(s) 887, 1408, 1812, 1822, 2132, 2860, 3365, 3460, 3746
LweI GCATC 7 cut(s) 378, 523, 1453, 1657, 2130, 2413, 2987
MaeII ACGT 6 cut(s) 39, 132, 264, 1609, 2749, 3102
MfeI CAATTG 2 cut(s) 597, 3057
MflI RGATCY 4 cut(s) 194, 1768, 2223, 2950
MhlI GDGCHC 5 cut(s) 884, 948, 2137, 2624, 3430
MlsI TGGCCA 4 cut(s) 863, 1329, 3486, 3503
MluNI TGGCCA 4 cut(s) 863, 1329, 3486, 3503
Mly113I GGCGCC 1 cut(s) 2118
MlyI GAGTC 4 cut(s) 980, 1682, 2304, 3584
MmeI TCCRAC 2 cut(s) 365, 3245
Mox20I TGGCCA 4 cut(s) 863, 1329, 3486, 3503
MroXI GAANNNNTTC 6 cut(s) 149, 1270, 1443, 2591, 2891, 3718
MscI TGGCCA 4 cut(s) 863, 1329, 3486, 3503
MseI TTAA 9 cut(s) 42, 990, 1164, 2037, 2217, 2874, 2957, 3065, 3761
MslI CAYNNNNRTG 2 cut(s) 983, 2537
Msp20I TGGCCA 4 cut(s) 863, 1329, 3486, 3503
MspA1I CMGCKG 2 cut(s) 1064, 3227
MspI CCGG 4 cut(s) 14, 33, 1239, 1275
MspR9I CCNGG 5 cut(s) 1240, 1331, 2016, 2825, 3299
MunI CAATTG 2 cut(s) 597, 3057
Mva1269I GAATGC 2 cut(s) 1043, 1768
MvaI CCWGG 4 cut(s) 1331, 2016, 2825, 3299
MvnI CGCG 2 cut(s) 2410, 2457
NarI GGCGCC 1 cut(s) 2118
NciI CCSGG 1 cut(s) 1240
NcoI CCATGG 1 cut(s) 1710
NheI GCTAGC 2 cut(s) 2647, 2867
NlaIV GGNNCC 9 cut(s) 205, 883, 1273, 1410, 1814, 1978, 2110, 2119, 2966
NmuCI GTSAC 5 cut(s) 512, 631, 685, 1011, 2573
NspI RCATGY 4 cut(s) 1490, 2051, 2208, 2647
NspV TTCGAA 1 cut(s) 3283
OliI CACNNNNGTG 1 cut(s) 2537
PagI TCATGA 2 cut(s) 2595, 2883
PciI ACATGT 1 cut(s) 2047
PciSI GCTCTTC 1 cut(s) 155
PcsI WCGNNNNNNNCGW 1 cut(s) 45
PctI GAATGC 2 cut(s) 1043, 1768
PdmI GAANNNNTTC 6 cut(s) 149, 1270, 1443, 2591, 2891, 3718
PfeI GAWTC 7 cut(s) 164, 448, 591, 1308, 1624, 2000, 2529
Pfl23II CGTACG 1 cut(s) 168
PflMI CCANNNNNTGG 2 cut(s) 1325, 2974
PleI GAGTC 4 cut(s) 979, 1681, 2304, 3583
PluTI GGCGCC 1 cut(s) 2121
PmaCI CACGTG 1 cut(s) 1610
PmlI CACGTG 1 cut(s) 1610
PpsI GAGTC 4 cut(s) 979, 1681, 2304, 3583
Ppu21I YACGTR 1 cut(s) 1610
PscI ACATGT 1 cut(s) 2047
Psp124BI GAGCTC 1 cut(s) 2137
Psp1406I AACGTT 3 cut(s) 39, 132, 264
Psp6I CCWGG 4 cut(s) 1329, 2014, 2823, 3297
PspCI CACGTG 1 cut(s) 1610
PspFI CCCAGC 3 cut(s) 877, 2651, 3227
PspGI CCWGG 4 cut(s) 1329, 2014, 2823, 3297
PspLI CGTACG 1 cut(s) 168
PspN4I GGNNCC 9 cut(s) 205, 883, 1273, 1410, 1814, 1978, 2110, 2119, 2966
PspPI GGNCC 3 cut(s) 204, 369, 1907
PstI CTGCAG 1 cut(s) 2251
PstNI CAGNNNCTG 3 cut(s) 230, 1031, 1676
PsuI RGATCY 4 cut(s) 194, 1768, 2223, 2950
PvuII CAGCTG 2 cut(s) 1064, 3227
RsaI GTAC 8 cut(s) 170, 320, 648, 812, 832, 1285, 2110, 3625
RsaNI GTAC 8 cut(s) 169, 319, 647, 811, 831, 1284, 2109, 3624
RseI CAYNNNNRTG 2 cut(s) 983, 2537
SacI GAGCTC 1 cut(s) 2137
SapI GCTCTTC 1 cut(s) 155
SaqAI TTAA 9 cut(s) 42, 990, 1164, 2037, 2217, 2874, 2957, 3065, 3761
Sau96I GGNCC 3 cut(s) 204, 369, 1907
ScaI AGTACT 1 cut(s) 320
SchI GAGTC 4 cut(s) 980, 1682, 2304, 3584
ScrFI CCNGG 5 cut(s) 1240, 1331, 2016, 2825, 3299
SduI GDGCHC 5 cut(s) 884, 948, 2137, 2624, 3430
SfaNI GCATC 7 cut(s) 378, 523, 1453, 1657, 2130, 2413, 2987
SfcI CTRYAG 3 cut(s) 1962, 2247, 2274
SfoI GGCGCC 1 cut(s) 2119
SfuI TTCGAA 1 cut(s) 3283
SinI GGWCC 2 cut(s) 369, 1907
SmiMI CAYNNNNRTG 2 cut(s) 983, 2537
SmlI CTYRAG 2 cut(s) 1145, 2617
SmoI CTYRAG 2 cut(s) 1145, 2617
SsiI CCGC 4 cut(s) 127, 669, 966, 2674
SspDI GGCGCC 1 cut(s) 2117
SspI AATATT 2 cut(s) 955, 1444
SstI GAGCTC 1 cut(s) 2137
StyD4I CCNGG 5 cut(s) 1238, 1329, 2014, 2823, 3297
StyI CCWWGG 5 cut(s) 324, 864, 1056, 1710, 3016
TaiI ACGT 6 cut(s) 42, 135, 267, 1612, 2752, 3105
TaqI TCGA 4 cut(s) 468, 2320, 2712, 3283
TaqII GACCGA 1 cut(s) 386
TatI WGTACW 3 cut(s) 318, 810, 1283
TauI GCSGC 1 cut(s) 969
TfiI GAWTC 7 cut(s) 164, 448, 591, 1308, 1624, 2000, 2529
Tru1I TTAA 9 cut(s) 42, 990, 1164, 2037, 2217, 2874, 2957, 3065, 3761
Tru9I TTAA 9 cut(s) 42, 990, 1164, 2037, 2217, 2874, 2957, 3065, 3761
TseFI GTSAC 5 cut(s) 512, 631, 685, 1011, 2573
Tsp45I GTSAC 5 cut(s) 512, 631, 685, 1011, 2573
TspGWI ACGGA 1 cut(s) 2069
Van91I CCANNNNNTGG 2 cut(s) 1325, 2974
VneI GTGCAC 1 cut(s) 944
VpaK11BI GGWCC 2 cut(s) 369, 1907
XagI CCTNNNNNAGG 2 cut(s) 1914, 3434
XapI RAATTY 2 cut(s) 3534, 3675
XbaI TCTAGA 4 cut(s) 2413, 2744, 3092, 3565
XceI RCATGY 4 cut(s) 1490, 2051, 2208, 2647
XcmI CCANNNNNNNNNTGG 2 cut(s) 322, 1901
XmaJI CCTAGG 1 cut(s) 3016
XmiI GTMKAC 1 cut(s) 2062
XmnI GAANNNNTTC 6 cut(s) 149, 1270, 1443, 2591, 2891, 3718
ZrmI AGTACT 1 cut(s) 320
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.