Prupe.1G047100_v2.0.a1

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000439
Physical Location & Seq
Reverse (-)
3329336 .. 3336812
7477 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G047100.3

Sequence Viewer

Length: 2949 bp
ATGCCACCAAAAAAGCACACAATTGCAGATGCCTGTCGTGTAATGAAGCGTTGTGGCATTTCGGGAGCCAAAACAAAGGCAGCGCTTAAGGAACTTCTAAAATTATATGAAAATAACTGGGAGCTTATTGTAGATGATGATTACAGAGTACTGCTTGACGTTATACTGGACAAGAATTCCAAGGAGGAGAGAGTGGAAAGCAAGGAAAAAGAAACTTTAATTCATGAATCAAAGGGAGTGAAATCCAAGAAGAAAGAAGCTCCATCATATGATAAAACTGAAGCTGTTGAACTTCCAACCCAGAGAGTACACACAAGACAACAGAAGAAACAGGCATTGTACCTCTCCAAGTCTTGCTCAGACGCAACTCCATCAAGACAGGCACATCCAAGTGATGATGATCTGTTGTCAGATTCTTCGTCTGAAAATAATCAACCACCATTGAGAAGATATTCAATGAAACAACAGGAAGCTTCTTCGATACATGAATCAGAGGGAGTGAAATCTAAGAACAAAGAAGCTCAAACTGAAGATGCTGAACGTCCAACAAAGAGATTATGGACAAGACAACAGAGAAAACAGGCATTGTCTCAGTCTAAATCTTCCTTGGGAACAACTCCATCAAGAAGTGCACATCCAAATGATGTTGAGCTGTTATCAGATTCTTCATGTGAAGACCTTCAGCCACCATTGTGCAAATATTCCCTGAAACACCAGGAAGAAGAAGCTAGGATACGTGAATCAGTGGGAGTGAAATCCAAGAACAAAAAAGCTCTATCATATGATAAAACTGAAGATGTTGAACTTCCAACCAAGAGATTATGCACAAGTCAGCGGAAAAAACAGGCAGTGTCTCTCTCCAAATCTTCCTTGGAAAAAACTCCATCAAGAAGTGCACATTTGAATGATGATCTTTTTTCCGATTCGTCATCTGAAGAACTTCAAACCCTATCCAGAAGAACTGTCCTAAGGCATCAGGAAGAAGAAGTTTTGATTCATGAATCAAAGGGAGTGAAATCTGAGAACAAGGAAGTGCCATTGTATGACAAAATTGAAGTTGATGCTTTTTCAACCAAGAAATTATACACAATACAACAGGAAAAAAAGTCATGTCCCTTCTCTAAATCTTGCTTGGAAACAGCTCCATCAAGAAAGGCACATCAGAATGATGAAGATGTGTTTTCAGATTCGGAAGAATCTGAGGAATGTATTCCACTATTGAGAACTAACTGGAGAAACCAGGAAGAAGGCGCTTTAGTCATTTGGGATAACTTAGATCCTGTGCATAGCTGCAATCCAGGGGTGGCAGAAAATCTCAATGTGATATTGTTACATGATTCTTCATATTATGATGGTTGTAATGCTGATGATGGTGAAGACAGCTCAGGGTTACTGGAAGTGGAACCATTGAATGTGGACAATAGAGATAGTGTTTATGATTTGTCACAGATGGATGTTTCATCATCTCCTCCAACAGGAGAGGTGAAAATTCCTTTGATTGGTACCTCTTCTCCACAGTATGATTTCCATCTGCCAAATTGTGATGCAGCGGTAGAAGTGGTGGAAGGGAGATGCATAAAATCATATAGCAATGGGGAATCCCATTTGGCAATACAAATTAAGTCCACTGTTGATAAAAAAACAAGACTCAGAGATTCACCGGATTTAAGAATTTCCAATGCACAACATGTTCTTGCCAGAAAAGATGATTACCAACGAGATAATTGCAGTGCCCCAAGTTTTCCTAGTGAAGTATTTGTATTTCAGAATCTTATCAAGATTGTACCCCACATACCAAAACATATAGTTTTCAGTGGATTTGAATGTCTCAACCACTTAATTGGTTTTACAACTGAGGACATTGAGAAAATTTGTGGTGAAAGTGGAAAGAGATTAAAGGTTCTCCGAGGGCTACAATCTTCAAAATTATGCAAGGTGGAGGCTGCTCAGAACCACCATTCTTCACTTGGAGTTGTAAAGTCCTGTGTTTATATTGATGACATAACTAGAGGTGAAGAAAGAGTGAAAATTTCTCTGGAAGATGGAAGAAATGTTGAAGATCTGCCAACCTTCTTTTACATCCCTCGGAATTTAGTTTATAAGAATGCCTATGTGAAATTTTCGCTTGTTCGTATATCTGATGAGGGTTGCTGTCCGCATTGTTATGGGGATTGTCTGGCATCACCGATACCATGTATCTGTGCTATTGAAACTAGGGGTGGGTTTGCTTACACACCCGGGGGATTGGTCAAGGACAAGTTTCTGGAAGTCTGTATATCTATGAAACAAGAACCTAAAGAACACCACTACGTATATTGTAAAAAGTGCCCACTTGAAAGCTCTAAGAACAAGAAGAGTCCTGTGGCATGCAAGGGCCATTTATTTCGGAAATTTATAAAGGAATGCTGGTCTAAATGCGGATGTAATGTGAACTGTGGAAACCGGATTGTTCAGCAAGGCATTACTGTGAAGTTGCAGGTGTTTTTGACGCTCGAAGGAAAAGGGTGGGGCCTTCAAACACTGGAGGACTTGCCAAGAGGGGCATTTGTCTGTGAATATGTTGGAGAGATAGTTACCAATACAGAACTATATGAGCGAAATATGCATGTTGGTAAGAAGCATACATGCCCGGTGCTACTAGATGCAGACTGGGGTTCAGGGGGTGTCTTAAAAGATGAAGAGGCACTTTGCTTAGATGCTACAGTTTATGGAAATGTTGCAAGATTTATCAATCACAGATGTTTTGATGCTACCTTGGTTGAGATCCCTGTTGAAGTGGAGACCCCAGATCATCACTATTATCATGTTGCCCTTTTCACAACAAGGAACGTTGCTGCTATGGAGGAGCTCACTTGGGACTATGGCATTGACTTTGATGACCATGATCATCCTGTGAAGACTTTCCAGTGTCTCTGTGGAAGCCCATTTTGTCGTGGCCGCAACCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00310 ko04211 map00310 map04211
Pfam Domains
Protein Families
Pre-SET SET WIYLD

Protein Analysis

983

Amino Acids

110.68

Weight (kDa)

6.16

Isoelectric Point (pI)

53.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000439)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380
fragaria_vesca FvH4_2g02250 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_5g31170 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620
malus_domestica MD02G1265700.v1.1 MD04G1231900.v1.1 MD12G1043600.v1.1 MD12G1250000.v1.1
prunus_persica Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1
pyrus_communis pycom02g22720 pycom04g20520
rosa_chinensis RchiOBHm_Chr3g0449441 RchiOBHm_Chr4g0395181 RchiOBHm_Chr6g0245941 RchiOBHm_Chr7g0228041
rosa_laevigata RLG00000001593 RLG00000009641 RLG00000015284 RLG00000025830
rosa_multiflora Rmu_co8250301.1_g000001 Rmu_co8518901.1_g000001 Rmu_sc0004858.1_g000011 Rmu_sc0007224.1_g000005 Rmu_sc0007891.1_g000010 Rmu_sc0019478.1_g000002 Rmu_sc0024829.1_g000001 Rmu_sc0039188.1_g000001
rosa_roxburghii Rroxscaffold_3G00231620 Rroxscaffold_5G00340120 Rroxscaffold_6G00427390 Rroxscaffold_7G00215050
rosa_rugosa Rorug02G0620600 Rorug03G0359100.1 Rorug03G0359200.1 Rorug03G0359300.1 Rorug05G0517600 Rorug05G0517700 Rorug05G0517800 Rorug05G0517900 Rorug05G0518000 Rorug05G0518100 Rorug05G0518200 Rorug05G0518300.1 Rorug07G0245600
rosa_samantha Rh3AG018400 Rh3BG018800 Rh3CG017700 Rh4AG057300 Rh4BG056200 Rh4CG062300 Rh4DG053200 Rh6AG032500 Rh6BG028300 Rh6CG028300 Rh6CG028500 Rh6CG028600 Rh7AG399400 Rh7BG380800 Rh7CG417400 Rh7DG394900
rosa_wichuraiana Rw4G004610 Rw6G002670 Rw7G033190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2100, 2396
AarI CACCTGC 1 cut(s) 2467
Acc36I ACCTGC 1 cut(s) 2467
Acc65I GGTACC 1 cut(s) 1502
AccB1I GGYRCC 1 cut(s) 1502
AciI CCGC 5 cut(s) 835, 1550, 2156, 2418, 2938
AclI AACGTT 1 cut(s) 2829
AclWI GGATC 2 cut(s) 1271, 2758
AcoI YGGCCR 1 cut(s) 2935
AcsI RAATTY 8 cut(s) 175, 1488, 1671, 1869, 2028, 2089, 2117, 2390
AcuI CTGAAG 5 cut(s) 300, 549, 665, 813, 954
AfaI GTAC 5 cut(s) 150, 309, 341, 1504, 1785
AfeI AGCGCT 1 cut(s) 84
AfiI CCNNNNNNNGG 2 cut(s) 1475, 1499
AflII CTTAAG 1 cut(s) 86
AflIII ACRYGT 1 cut(s) 1687
AjnI CCWGG 3 cut(s) 714, 1239, 1297
AleI CACNNNNGTG 1 cut(s) 691
Alw21I GWGCWC 3 cut(s) 634, 898, 2850
Alw26I GTCTC 5 cut(s) 594, 858, 1832, 2774, 2915
Alw44I GTGCAC 2 cut(s) 630, 894
AlwI GGATC 2 cut(s) 1271, 2758
Ama87I CYCGRG 1 cut(s) 2237
Aor51HI AGCGCT 1 cut(s) 84
AoxI GGCC 3 cut(s) 2374, 2509, 2935
ApaLI GTGCAC 2 cut(s) 630, 894
ApeKI GCWGC 5 cut(s) 80, 1290, 1547, 1943, 2834
ApoI RAATTY 8 cut(s) 175, 1488, 1671, 1869, 2028, 2089, 2117, 2390
Asp700I GAANNNNTTC 5 cut(s) 451, 678, 939, 1209, 2900
Asp718I GGTACC 1 cut(s) 1502
AspLEI GCGC 2 cut(s) 85, 1253
AspS9I GGNCC 2 cut(s) 2374, 2509
AsuC2I CCSGG 3 cut(s) 2238, 2239, 2630
AsuHPI GGTGA 6 cut(s) 1385, 1495, 1650, 1889, 2024, 2175
AvaI CYCGRG 1 cut(s) 2237
AxyI CCTNAGG 1 cut(s) 968
BaeGI GKGCMC 4 cut(s) 634, 898, 1735, 2330
BanI GGYRCC 1 cut(s) 1502
BanII GRGCYC 1 cut(s) 2850
BarI GAAGNNNNNNTAC 2 cut(s) 717, 749
BbsI GAAGAC 3 cut(s) 681, 1383, 2903
Bbv12I GWGCWC 3 cut(s) 634, 898, 2850
BbvI GCAGC 5 cut(s) 92, 1277, 1559, 1930, 2821
BcgI CGANNNNNNTGC 2 cut(s) 1707, 1741
BciT130I CCWGG 3 cut(s) 716, 1241, 1299
BciVI GTATCC 1 cut(s) 726
BclI TGATCA 1 cut(s) 2884
BcnI CCSGG 3 cut(s) 2238, 2239, 2630
BcoDI GTCTC 5 cut(s) 594, 858, 1832, 2774, 2915
BfaI CTAG 5 cut(s) 729, 1746, 2007, 2214, 2639
BfmI CTRYAG 1 cut(s) 2700
BfoI RGCGCY 2 cut(s) 86, 1254
BfrI CTTAAG 1 cut(s) 86
BfuAI ACCTGC 1 cut(s) 2467
BfuI GTATCC 1 cut(s) 726
BglII AGATCT 1 cut(s) 2059
BisI GCNGC 6 cut(s) 81, 1291, 1548, 1944, 2835, 2938
BlsI GCNGC 6 cut(s) 82, 1292, 1549, 1945, 2836, 2939
BmcAI AGTACT 1 cut(s) 150
Bme1390I CCNGG 6 cut(s) 716, 1241, 1299, 2238, 2239, 2630
BmeT110I CYCGRG 1 cut(s) 2237
BmgT120I GGNCC 2 cut(s) 2374, 2509
BmiI GGNNCC 4 cut(s) 67, 1404, 1504, 2510
BmrFI CCNGG 6 cut(s) 716, 1241, 1299, 2238, 2239, 2630
BmrI ACTGGG 2 cut(s) 127, 2659
BmuI ACTGGG 2 cut(s) 127, 2659
BpiI GAAGAC 3 cut(s) 681, 1383, 2903
BpmI CTGGAG 2 cut(s) 1252, 2543
Bpu10I CCTNAGC 1 cut(s) 1384
BpuMI CCSGG 3 cut(s) 2238, 2239, 2630
BsaAI YACGTR 2 cut(s) 737, 2311
BsaBI GATNNNNATC 2 cut(s) 399, 1527
BsaI GGTCTC 1 cut(s) 2774
BsaJI CCNNGG 9 cut(s) 180, 606, 870, 1298, 1906, 2084, 2237, 2238, 2754
BsaWI WCCGGW 2 cut(s) 1660, 2442
BsaXI ACNNNNNCTCC 4 cut(s) 1495, 1525, 2556, 2586
Bsc4I CCNNNNNNNGG 2 cut(s) 1475, 1499
Bse1I ACTGG 7 cut(s) 122, 171, 1235, 1398, 2526, 2654, 2905
Bse21I CCTNAGG 1 cut(s) 968
Bse3DI GCAATG 1 cut(s) 1597
Bse8I GATNNNNATC 2 cut(s) 399, 1527
BseBI CCWGG 3 cut(s) 716, 1241, 1299
BseDI CCNNGG 9 cut(s) 180, 606, 870, 1298, 1906, 2084, 2237, 2238, 2754
BseGI GGATG 6 cut(s) 385, 634, 1459, 2079, 2426, 2887
BseJI GATNNNNATC 2 cut(s) 399, 1527
BseLI CCNNNNNNNGG 2 cut(s) 1475, 1499
BseMI GCAATG 1 cut(s) 1597
BseMII CTCAG 8 cut(s) 372, 605, 1011, 1191, 1398, 1663, 1845, 1961
BseNI ACTGG 7 cut(s) 122, 171, 1235, 1398, 2526, 2654, 2905
BseRI GAGGAG 3 cut(s) 200, 1458, 2858
BseSI GKGCMC 4 cut(s) 634, 898, 1735, 2330
BseXI GCAGC 5 cut(s) 92, 1277, 1559, 1930, 2821
BshFI GGCC 3 cut(s) 2376, 2511, 2937
BshNI GGYRCC 1 cut(s) 1502
BsiHKAI GWGCWC 3 cut(s) 634, 898, 2850
BsiHKCI CYCGRG 1 cut(s) 2237
BsiSI CCGG 4 cut(s) 1661, 2238, 2443, 2630
BslFI GGGAC 2 cut(s) 1098, 2870
BslI CCNNNNNNNGG 2 cut(s) 1475, 1499
BsmAI GTCTC 5 cut(s) 594, 858, 1832, 2774, 2915
BsmFI GGGAC 2 cut(s) 1098, 2870
BsmI GAATGC 2 cut(s) 2110, 2408
BsnI GGCC 3 cut(s) 2376, 2511, 2937
Bso31I GGTCTC 1 cut(s) 2774
BsoBI CYCGRG 1 cut(s) 2237
Bsp1286I GDGCHC 5 cut(s) 634, 898, 1735, 2330, 2850
Bsp143I GATC 7 cut(s) 400, 910, 1276, 2059, 2763, 2788, 2884
BspACI CCGC 5 cut(s) 835, 1550, 2156, 2418, 2938
BspANI GGCC 3 cut(s) 2376, 2511, 2937
BspCNI CTCAG 8 cut(s) 371, 604, 1012, 1192, 1397, 1662, 1846, 1960
BspHI TCATGA 2 cut(s) 223, 997
BspLI GGNNCC 4 cut(s) 67, 1404, 1504, 2510
BspMI ACCTGC 1 cut(s) 2467
BspPI GGATC 2 cut(s) 1271, 2758
BspT107I GGYRCC 1 cut(s) 1502
BspTI CTTAAG 1 cut(s) 86
BspTNI GGTCTC 1 cut(s) 2774
BsrDI GCAATG 1 cut(s) 1597
BsrI ACTGG 7 cut(s) 122, 171, 1235, 1398, 2526, 2654, 2905
BssECI CCNNGG 9 cut(s) 180, 606, 870, 1298, 1906, 2084, 2237, 2238, 2754
BssMI GATC 7 cut(s) 400, 910, 1276, 2059, 2763, 2788, 2884
BssT1I CCWWGG 4 cut(s) 180, 606, 870, 2754
Bst2UI CCWGG 3 cut(s) 716, 1241, 1299
Bst4CI ACNGT 6 cut(s) 964, 1518, 1630, 2435, 2467, 2704
Bst6I CTCTTC 3 cut(s) 1513, 2348, 2673
BstAFI CTTAAG 1 cut(s) 86
BstBAI YACGTR 2 cut(s) 737, 2311
BstC8I GCNNGC 1 cut(s) 2368
BstENI CCTNNNNNAGG 1 cut(s) 1473
BstF5I GGATG 6 cut(s) 385, 634, 1459, 2079, 2426, 2887
BstH2I RGCGCY 2 cut(s) 86, 1254
BstHHI GCGC 2 cut(s) 85, 1253
BstKTI GATC 7 cut(s) 403, 913, 1279, 2062, 2766, 2791, 2887
BstMAI GTCTC 5 cut(s) 594, 858, 1832, 2774, 2915
BstMBI GATC 7 cut(s) 400, 910, 1276, 2059, 2763, 2788, 2884
BstMWI GCNNNNNNNGC 1 cut(s) 2602
BstNI CCWGG 3 cut(s) 716, 1241, 1299
BstNSI RCATGY 4 cut(s) 1691, 2370, 2609, 2628
BstSCI CCNGG 6 cut(s) 714, 1239, 1297, 2236, 2237, 2628
BstSFI CTRYAG 1 cut(s) 2700
BstSLI GKGCMC 4 cut(s) 634, 898, 1735, 2330
BstSNI TACGTA 1 cut(s) 2311
BstV1I GCAGC 5 cut(s) 92, 1277, 1559, 1930, 2821
BstV2I GAAGAC 3 cut(s) 681, 1383, 2903
BstX2I RGATCY 3 cut(s) 1276, 2059, 2763
BstXI CCANNNNNNTGG 1 cut(s) 1841
BstYI RGATCY 3 cut(s) 1276, 2059, 2763
Bsu36I CCTNAGG 1 cut(s) 968
BsuI GTATCC 1 cut(s) 726
BsuRI GGCC 3 cut(s) 2376, 2511, 2937
BtsCI GGATG 6 cut(s) 385, 634, 1459, 2079, 2426, 2887
BtsI GCAGTG 2 cut(s) 855, 1735
BtsIMutI CAGTG 7 cut(s) 750, 855, 1626, 1735, 1819, 2519, 2912
BveI ACCTGC 1 cut(s) 2467
Cac8I GCNNGC 1 cut(s) 2368
CciI TCATGA 2 cut(s) 223, 997
CfoI GCGC 2 cut(s) 85, 1253
Cfr13I GGNCC 2 cut(s) 2374, 2509
Cfr9I CCCGGG 1 cut(s) 2237
CseI GACGC 2 cut(s) 371, 2497
Csp6I GTAC 5 cut(s) 149, 308, 340, 1503, 1784
CviQI GTAC 5 cut(s) 149, 308, 340, 1503, 1784
DpnI GATC 7 cut(s) 402, 912, 1278, 2061, 2765, 2790, 2886
DpnII GATC 7 cut(s) 400, 910, 1276, 2059, 2763, 2788, 2884
EaeI YGGCCR 1 cut(s) 2935
Eam1104I CTCTTC 3 cut(s) 1513, 2348, 2673
EarI CTCTTC 3 cut(s) 1513, 2348, 2673
Ecl136II GAGCTC 1 cut(s) 2848
Eco105I TACGTA 1 cut(s) 2311
Eco130I CCWWGG 4 cut(s) 180, 606, 870, 2754
Eco24I GRGCYC 1 cut(s) 2850
Eco31I GGTCTC 1 cut(s) 2774
Eco47III AGCGCT 1 cut(s) 84
Eco53kI GAGCTC 1 cut(s) 2848
Eco57I CTGAAG 5 cut(s) 300, 549, 665, 813, 954
Eco81I CCTNAGG 1 cut(s) 968
Eco88I CYCGRG 1 cut(s) 2237
EcoICRI GAGCTC 1 cut(s) 2848
EcoNI CCTNNNNNAGG 1 cut(s) 1473
EcoO109I RGGNCCY 1 cut(s) 2509
EcoRI GAATTC 1 cut(s) 175
EcoRII CCWGG 3 cut(s) 714, 1239, 1297
EcoT14I CCWWGG 4 cut(s) 180, 606, 870, 2754
EcoT22I ATGCAT 2 cut(s) 1577, 2607
EcoT38I GRGCYC 1 cut(s) 2850
ErhI CCWWGG 4 cut(s) 180, 606, 870, 2754
FalI AAGNNNNNCTT 2 cut(s) 2670, 2702
FaqI GGGAC 2 cut(s) 1098, 2870
FauNDI CATATG 2 cut(s) 268, 781
FbaI TGATCA 1 cut(s) 2884
Fnu4HI GCNGC 6 cut(s) 81, 1291, 1548, 1944, 2835, 2938
FokI GGATG 6 cut(s) 372, 621, 1466, 2066, 2433, 2874
FriOI GRGCYC 1 cut(s) 2850
Fsp4HI GCNGC 6 cut(s) 81, 1291, 1548, 1944, 2835, 2938
FspBI CTAG 5 cut(s) 729, 1746, 2007, 2214, 2639
GlaI GCGC 2 cut(s) 84, 1252
GluI GCNGC 6 cut(s) 81, 1291, 1548, 1944, 2835, 2938
GsuI CTGGAG 2 cut(s) 1252, 2543
HaeII RGCGCY 2 cut(s) 86, 1254
HaeIII GGCC 3 cut(s) 2376, 2511, 2937
HapII CCGG 4 cut(s) 1661, 2238, 2443, 2630
HgaI GACGC 2 cut(s) 371, 2497
HhaI GCGC 2 cut(s) 85, 1253
Hin6I GCGC 2 cut(s) 83, 1251
HinP1I GCGC 2 cut(s) 83, 1251
HindIII AAGCTT 1 cut(s) 471
HpaII CCGG 4 cut(s) 1661, 2238, 2443, 2630
HphI GGTGA 6 cut(s) 1385, 1495, 1650, 1889, 2024, 2175
Hpy166II GTNNAC 6 cut(s) 310, 632, 896, 1417, 1626, 2431
Hpy8I GTNNAC 6 cut(s) 310, 632, 896, 1417, 1626, 2431
HpyAV CCTTC 7 cut(s) 689, 1126, 1241, 1559, 2080, 2489, 2522
HpyCH4III ACNGT 6 cut(s) 964, 1518, 1630, 2435, 2467, 2704
HpyCH4IV ACGT 5 cut(s) 159, 541, 736, 2310, 2829
HpyF10VI GCNNNNNNNGC 1 cut(s) 2602
HpySE526I ACGT 5 cut(s) 159, 541, 736, 2310, 2829
HspAI GCGC 2 cut(s) 83, 1251
KpnI GGTACC 1 cut(s) 1506
Ksp22I TGATCA 1 cut(s) 2884
Kzo9I GATC 7 cut(s) 400, 910, 1276, 2059, 2763, 2788, 2884
LmnI GCTCC 5 cut(s) 65, 121, 265, 1147, 2845
Lsp1109I GCAGC 5 cut(s) 92, 1277, 1559, 1930, 2821
MaeI CTAG 5 cut(s) 729, 1746, 2007, 2214, 2639
MaeII ACGT 5 cut(s) 159, 541, 736, 2310, 2829
MaeIII GTNAC 4 cut(s) 1329, 1389, 1443, 2572
MalI GATC 7 cut(s) 402, 912, 1278, 2061, 2765, 2790, 2886
MboI GATC 7 cut(s) 400, 910, 1276, 2059, 2763, 2788, 2884
MfeI CAATTG 1 cut(s) 21
MflI RGATCY 3 cut(s) 1276, 2059, 2763
MhlI GDGCHC 5 cut(s) 634, 898, 1735, 2330, 2850
MlyI GAGTC 2 cut(s) 1641, 2365
MmeI TCCRAC 5 cut(s) 320, 569, 833, 1496, 2542
Mph1103I ATGCAT 2 cut(s) 1577, 2607
MroXI GAANNNNTTC 5 cut(s) 451, 678, 939, 1209, 2900
MseI TTAA 8 cut(s) 87, 218, 1620, 1667, 1838, 1895, 2669, 2947
MslI CAYNNNNRTG 7 cut(s) 390, 639, 691, 903, 1164, 2163, 2465
MspA1I CMGCKG 2 cut(s) 835, 1550
MspCI CTTAAG 1 cut(s) 86
MspI CCGG 4 cut(s) 1661, 2238, 2443, 2630
MspR9I CCNGG 6 cut(s) 716, 1241, 1299, 2238, 2239, 2630
MunI CAATTG 1 cut(s) 21
Mva1269I GAATGC 2 cut(s) 2110, 2408
MvaI CCWGG 3 cut(s) 716, 1241, 1299
MwoI GCNNNNNNNGC 1 cut(s) 2602
NciI CCSGG 3 cut(s) 2238, 2239, 2630
NdeI CATATG 2 cut(s) 268, 781
NdeII GATC 7 cut(s) 400, 910, 1276, 2059, 2763, 2788, 2884
NlaIV GGNNCC 4 cut(s) 67, 1404, 1504, 2510
NmuCI GTSAC 1 cut(s) 1443
NsiI ATGCAT 2 cut(s) 1577, 2607
NspI RCATGY 4 cut(s) 1691, 2370, 2609, 2628
OliI CACNNNNGTG 1 cut(s) 691
PaeI GCATGC 1 cut(s) 2370
PagI TCATGA 2 cut(s) 223, 997
PaqCI CACCTGC 1 cut(s) 2467
PciI ACATGT 1 cut(s) 1687
PctI GAATGC 2 cut(s) 2110, 2408
PdmI GAANNNNTTC 5 cut(s) 451, 678, 939, 1209, 2900
PkrI GCNGC 6 cut(s) 82, 1292, 1549, 1945, 2836, 2939
PleI GAGTC 2 cut(s) 1641, 2364
PpsI GAGTC 2 cut(s) 1641, 2364
Ppu21I YACGTR 2 cut(s) 737, 2311
PscI ACATGT 1 cut(s) 1687
PsiI TTATAA 2 cut(s) 2100, 2396
Psp124BI GAGCTC 1 cut(s) 2850
Psp1406I AACGTT 1 cut(s) 2829
Psp6I CCWGG 3 cut(s) 714, 1239, 1297
PspGI CCWGG 3 cut(s) 714, 1239, 1297
PspN4I GGNNCC 4 cut(s) 67, 1404, 1504, 2510
PspPI GGNCC 2 cut(s) 2374, 2509
PsuI RGATCY 3 cut(s) 1276, 2059, 2763
RsaI GTAC 5 cut(s) 150, 309, 341, 1504, 1785
RsaNI GTAC 5 cut(s) 149, 308, 340, 1503, 1784
RseI CAYNNNNRTG 7 cut(s) 390, 639, 691, 903, 1164, 2163, 2465
SacI GAGCTC 1 cut(s) 2850
SaqAI TTAA 8 cut(s) 87, 218, 1620, 1667, 1838, 1895, 2669, 2947
SatI GCNGC 6 cut(s) 81, 1291, 1548, 1944, 2835, 2938
Sau3AI GATC 7 cut(s) 400, 910, 1276, 2059, 2763, 2788, 2884
Sau96I GGNCC 2 cut(s) 2374, 2509
ScaI AGTACT 1 cut(s) 150
SchI GAGTC 2 cut(s) 1641, 2365
ScrFI CCNGG 6 cut(s) 716, 1241, 1299, 2238, 2239, 2630
SduI GDGCHC 5 cut(s) 634, 898, 1735, 2330, 2850
SfcI CTRYAG 1 cut(s) 2700
SmaI CCCGGG 1 cut(s) 2239
SmiMI CAYNNNNRTG 7 cut(s) 390, 639, 691, 903, 1164, 2163, 2465
SmlI CTYRAG 1 cut(s) 86
SmoI CTYRAG 1 cut(s) 86
SnaBI TACGTA 1 cut(s) 2311
SphI GCATGC 1 cut(s) 2370
SsiI CCGC 5 cut(s) 835, 1550, 2156, 2418, 2938
SspI AATATT 1 cut(s) 701
SspMI CTAG 5 cut(s) 729, 1746, 2007, 2214, 2639
SstI GAGCTC 1 cut(s) 2850
StyD4I CCNGG 6 cut(s) 714, 1239, 1297, 2236, 2237, 2628
StyI CCWWGG 4 cut(s) 180, 606, 870, 2754
TaaI ACNGT 6 cut(s) 964, 1518, 1630, 2435, 2467, 2704
TaiI ACGT 5 cut(s) 162, 544, 739, 2313, 2832
TaqI TCGA 2 cut(s) 479, 2493
TatI WGTACW 2 cut(s) 148, 307
TauI GCSGC 1 cut(s) 2940
Tru1I TTAA 8 cut(s) 87, 218, 1620, 1667, 1838, 1895, 2669, 2947
Tru9I TTAA 8 cut(s) 87, 218, 1620, 1667, 1838, 1895, 2669, 2947
TscAI CASTG 7 cut(s) 750, 855, 1633, 1735, 1819, 2526, 2912
TseFI GTSAC 1 cut(s) 1443
TseI GCWGC 5 cut(s) 80, 1290, 1547, 1943, 2834
Tsp45I GTSAC 1 cut(s) 1443
TspMI CCCGGG 1 cut(s) 2237
TspRI CASTG 7 cut(s) 750, 855, 1633, 1735, 1819, 2526, 2912
Vha464I CTTAAG 1 cut(s) 86
VneI GTGCAC 2 cut(s) 630, 894
XagI CCTNNNNNAGG 1 cut(s) 1473
XapI RAATTY 8 cut(s) 175, 1488, 1671, 1869, 2028, 2089, 2117, 2390
XceI RCATGY 4 cut(s) 1691, 2370, 2609, 2628
XcmI CCANNNNNNNNNTGG 3 cut(s) 868, 1964, 2912
XmaI CCCGGG 1 cut(s) 2237
XmnI GAANNNNTTC 5 cut(s) 451, 678, 939, 1209, 2900
XspI CTAG 5 cut(s) 729, 1746, 2007, 2214, 2639
ZrmI AGTACT 1 cut(s) 150
Zsp2I ATGCAT 2 cut(s) 1577, 2607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.