RchiOBHm_Chr4g0395181

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000439
Physical Location & Seq
Reverse (-)
10960113 .. 10966079
5967 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36763

Sequence Viewer

Length: 2727 bp
ATGAAGCCAAGAGATCGCAAAACTATAAATGCCTGTAGTGCAATGAAGAGATTTGGCATTACACCTGCCAAAACAAAGACAGCACTTAAGACACTTCTGAAATTGTATGAAAATAACTGGGAGCTTATCGAAGATGAGCATTACAAAGTACTTTTTGATGTTTTGATGCCAGAGGAACAGAGAGTGGAACCCAAGGGAAAAGAAACTTTGATCCTTGAATCAGAGGGAATGACAACTTCTCACAAAAAAGTTCCACCACATGTCAAAACTGAAGTTTCTGAACTTCCAATCAAGACATTATTCACAGGACAAGAGGAAAAACATGCATCATCACTCTCCAAATCTTCCTTGGATTCAAATCCATCAAGAAGAGCACATCAGAATGATGGTGATTCTGGTGCATCTCAGCCATTACTGAGAAGAGCCCGCCTATTTAGCTGCCGAGAAGAAGCTTTCATCCGTGAATCAAAGCGGGAATTGAAATCAAAGAACAAAGAAGCTCCACCAGATAATAATACTGAAGTTTTTGAACTTCCAACTAAGAGATTATACACAAGACAAAAGAAAAAACAGGCATTGTCCCTATCCAAATCATGCATGGAAATACCTCCATCAAGAAAGGCACATCAGAGTGATGATGATCTGTTTACAGATTCTGAAGAAGCTCAACCATTATTGAAAAGACCCCGCCTAAGAGACCAGGAAGGAGAAGCTATGATCTGCGACTCAAAGGGAGTGATTTATAATAACATCAAAAGTCCATCAAATGGTAAAACTGAAGTTGTTGAAGTTCCAACCAATAGATACACAAGACAACGAAAAAAGAAGGCATCCTCTCTCCCCAAATCTTGCATGGAAACAAGTCTCTCAACAATGGCACATCAGAATGATGGTGGTCTGTTTTATGATTCTGAAGAATCTGAAGAAACTCCACTAATATCTAGAAGAAATCAGGGGAGACACCAGAAAAAGAACGTTTTGGTTTCTGGGAACAAATTGGTTTCTGGCATTCCACCACCAGCCAAAAGTCCCATTGTGATATGTCTAGATAGTTCTTCAGATAGTGATGTTTGTAATGTTGATGAAGAAAGATTAGAGGCACTGGATGAGGAACCATTGACTGTGGACAACATAGCTTATATGTCACAGATGGATGATGATGAAGACAGGTTGGAGTTGCTGAAAGTAGAACCATTGATTGTGGACAGCAGAGGTTGTGTTTTAGATTCGTCACAGGTTGATGTTGCATCATCGCTTTCAAAGGGAGAAGTGAATATTTCTCTGACTTGTAACTCTTTTCCACAGTCTGATATTCATTTTCCATGTATGGAAGTGGTGGAAGAGAGAGGCATTAAATCGTATTGCAATCAAGAATGCTCTTTGGCTATAGGAACTGATTCAATTACTGATGAAAATGCAAGGTTCAGAGAGGTGCCCCAGCTACAAAACTCGAAGTCACAAGATGTTCTTGCCATAAAAGATGATTATCAAGGAAGTAATTGCAGTGCTCTAGGATTTCCTACTGAAGTATTTGTATTTCAGAATCTTATCAAGATTGTACCCCATATACCCAGACACATAGATCCTTGTAGATTTGGATGTCTTCACAGTTTAATCGGTTTTCCAATTAAGGATATTGAGAATTTTTTTGGTAAAAGTGGAAAAAGATTAAGGGTTCTCCCAGGCCTGCAATTCTCTAGGTTACATAAGGTGGAGGCTGCTGAGAATTCAGAAGTTGTAAAGTTATTTGTTTATGTAGATAACATAACTAGAGGTGAAGAAAATTTGAAAATTCCCTTGGAAGGTGGAAGAAATGCTGAAGATCTGTCGACATTCTTTTACATGCCTCAGAATGTAGTTTATAAAAATGCCCATGTGAATTTTGCACTTCATTGTACCTCTAACCAGGCTTGGTGTTCACGTTGTTTCGGGAATTGTCTGGCATCACCGGTACCATGTGCCTGTGCTATGCAAACTGCGGGTGGGTTTGCATACGCACCAGATGGATCGGTCAAGGATACTTTTATGGAAGAATGTTTGTCAGTGATCCAGGAACGTAAACAACACCAGTACTTCTATTGTAAAAAGTGCCCTCTTGAAAGTTTTAGGAAGAAAAAGAGTTCTTGCCCATGCAAAGGCCATTTATTACAGAAATTTGTAAAGGAATGTTGGTCTAAATGTGGATGCAACAAGAACTGTGGGAACCGGATTATTCAACAAGGCATTTCTGTCAAGCTGCAGGTGTTTTTGACACCCGAAGGGAAAGGGTGGGGTCTTCGAACACTGGAGGACTTGCCGAGAGGGGCTTTTGTTTGTGAGTATGTTGGAGAGATACTAACAATCACAGAACTATATGAGCGAAATATGCAAAGTGCTGGTAAGAGGCATTCATACACAGTGCTACTAGATGCAAACTGGCATTCAAAGGGTGTCTTGAAAGATGAAGAGGCACTTTGCTTAGACGCTACAGTTTATGGAAATGTTGCAAGGTTTATCAACCACAGATGCTCTGATGCTACCTTGGTTCAGATCCCTGTTGAAGTGGAGACTCCTGACCATCACTATTATCATGTTGCCCTTTTCACAACAAGGAATGTTGCTGCTATGGAAGAGCTTACTTGGGACTATGGCATTGACTTTGATGACCATGATCATCCTGTGAAGCCATTTCCTTGTCTTTGTGGAAGCCAATTCTGTCGTGGCAGTGACTTCAAAGTTCAAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00310 ko04211 map00310 map04211
Pfam Domains
Protein Families
Pre-SET SET WIYLD

Protein Analysis

908

Amino Acids

102.36

Weight (kDa)

6.44

Isoelectric Point (pI)

54.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WIYLD PF10440 4 - 59 6.7e-16 Ubiquitin-binding WIYLD domain
SET PF00856 756 - 877 7e-19 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000439)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380
fragaria_vesca FvH4_2g02250 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_5g31170 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620
malus_domestica MD02G1265700.v1.1 MD04G1231900.v1.1 MD12G1043600.v1.1 MD12G1250000.v1.1
prunus_persica Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1
pyrus_communis pycom02g22720 pycom04g20520
rosa_chinensis RchiOBHm_Chr3g0449441 RchiOBHm_Chr4g0395181 RchiOBHm_Chr6g0245941 RchiOBHm_Chr7g0228041
rosa_laevigata RLG00000001593 RLG00000009641 RLG00000015284 RLG00000025830
rosa_multiflora Rmu_co8250301.1_g000001 Rmu_co8518901.1_g000001 Rmu_sc0004858.1_g000011 Rmu_sc0007224.1_g000005 Rmu_sc0007891.1_g000010 Rmu_sc0019478.1_g000002 Rmu_sc0024829.1_g000001 Rmu_sc0039188.1_g000001
rosa_roxburghii Rroxscaffold_3G00231620 Rroxscaffold_5G00340120 Rroxscaffold_6G00427390 Rroxscaffold_7G00215050
rosa_rugosa Rorug02G0620600 Rorug03G0359100.1 Rorug03G0359200.1 Rorug03G0359300.1 Rorug05G0517600 Rorug05G0517700 Rorug05G0517800 Rorug05G0517900 Rorug05G0518000 Rorug05G0518100 Rorug05G0518200 Rorug05G0518300.1 Rorug07G0245600
rosa_samantha Rh3AG018400 Rh3BG018800 Rh3CG017700 Rh4AG057300 Rh4BG056200 Rh4CG062300 Rh4DG053200 Rh6AG032500 Rh6BG028300 Rh6CG028300 Rh6CG028500 Rh6CG028600 Rh7AG399400 Rh7BG380800 Rh7CG417400 Rh7DG394900
rosa_wichuraiana Rw4G004610 Rw6G002670 Rw7G033190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 744, 1863
AarI CACCTGC 2 cut(s) 73, 2230
Acc36I ACCTGC 2 cut(s) 73, 2230
Acc65I GGTACC 1 cut(s) 1951
AccB1I GGYRCC 2 cut(s) 1432, 1951
AccB7I CCANNNNNTGG 1 cut(s) 767
AccI GTMKAC 1 cut(s) 1829
AciI CCGC 4 cut(s) 427, 472, 688, 1979
AclI AACGTT 1 cut(s) 975
AclWI GGATC 5 cut(s) 205, 1577, 2014, 2041, 2524
AcsI RAATTY 6 cut(s) 1642, 1726, 1783, 1791, 1879, 2153
AcuI CTGAAG 9 cut(s) 291, 540, 678, 798, 933, 942, 1041, 1545, 1839
AfaI GTAC 5 cut(s) 150, 1560, 1897, 1953, 2072
AfiI CCNNNNNNNGG 3 cut(s) 767, 1802, 2135
AflII CTTAAG 1 cut(s) 86
AflIII ACRYGT 1 cut(s) 259
AgeI ACCGGT 1 cut(s) 1948
AjnI CCWGG 4 cut(s) 699, 1681, 1905, 2049
AjuI GAANNNNNNNTTGG 2 cut(s) 1781, 1813
Alw21I GWGCWC 2 cut(s) 376, 1510
Alw26I GTCTC 4 cut(s) 690, 869, 952, 2540
AlwI GGATC 5 cut(s) 205, 1577, 2014, 2041, 2524
AlwNI CAGNNNCTG 1 cut(s) 656
AoxI GGCC 2 cut(s) 1684, 2137
ApeKI GCWGC 4 cut(s) 438, 1718, 2236, 2600
ApoI RAATTY 6 cut(s) 1642, 1726, 1783, 1791, 1879, 2153
AsiGI ACCGGT 1 cut(s) 1948
Asp700I GAANNNNTTC 1 cut(s) 1396
Asp718I GGTACC 1 cut(s) 1951
AsuHPI GGTGA 3 cut(s) 401, 1787, 1938
AsuII TTCGAA 1 cut(s) 2278
BaeGI GKGCMC 2 cut(s) 1437, 2093
BanI GGYRCC 2 cut(s) 1432, 1951
BanII GRGCYC 1 cut(s) 427
BbsI GAAGAC 3 cut(s) 1170, 1595, 2267
Bbv12I GWGCWC 2 cut(s) 376, 1510
BbvI GCAGC 4 cut(s) 425, 1705, 2223, 2587
BccI CCATC 8 cut(s) 370, 380, 619, 769, 884, 1144, 1997, 2565
BciT130I CCWGG 4 cut(s) 701, 1683, 1907, 2051
BciVI GTATCC 1 cut(s) 2011
BclI TGATCA 1 cut(s) 2650
BcoDI GTCTC 4 cut(s) 690, 869, 952, 2540
BfaI CTAG 6 cut(s) 942, 1046, 1511, 1698, 1770, 2405
BfmI CTRYAG 4 cut(s) 34, 1386, 2237, 2466
BfrI CTTAAG 1 cut(s) 86
BfuAI ACCTGC 2 cut(s) 73, 2230
BfuI GTATCC 1 cut(s) 2011
BglII AGATCT 1 cut(s) 1822
BisI GCNGC 4 cut(s) 439, 1719, 2237, 2601
BlsI GCNGC 4 cut(s) 440, 1720, 2238, 2602
BmcAI AGTACT 2 cut(s) 150, 2072
Bme1390I CCNGG 4 cut(s) 701, 1683, 1907, 2051
BmiI GGNNCC 5 cut(s) 189, 1113, 1434, 1953, 2204
BmrFI CCNGG 4 cut(s) 701, 1683, 1907, 2051
BmrI ACTGGG 1 cut(s) 127
BmuI ACTGGG 1 cut(s) 127
BpiI GAAGAC 3 cut(s) 1170, 1595, 2267
BpmI CTGGAG 1 cut(s) 2306
Bpu14I TTCGAA 1 cut(s) 2278
BsaBI GATNNNNATC 3 cut(s) 357, 639, 1485
BsaI GGTCTC 1 cut(s) 690
BsaJI CCNNGG 5 cut(s) 192, 348, 1681, 1797, 2520
BsaWI WCCGGW 2 cut(s) 1948, 2205
Bsc4I CCNNNNNNNGG 3 cut(s) 767, 1802, 2135
Bse118I RCCGGY 1 cut(s) 1948
Bse1I ACTGG 5 cut(s) 122, 1107, 2068, 2289, 2420
Bse3DI GCAATG 1 cut(s) 48
Bse8I GATNNNNATC 3 cut(s) 357, 639, 1485
BseBI CCWGG 4 cut(s) 701, 1683, 1907, 2051
BseDI CCNNGG 5 cut(s) 192, 348, 1681, 1797, 2520
BseGI GGATG 7 cut(s) 456, 830, 1111, 1159, 1604, 2189, 2653
BseJI GATNNNNATC 3 cut(s) 357, 639, 1485
BseLI CCNNNNNNNGG 3 cut(s) 767, 1802, 2135
BseMI GCAATG 1 cut(s) 48
BseMII CTCAG 4 cut(s) 407, 419, 1713, 1862
BseNI ACTGG 5 cut(s) 122, 1107, 2068, 2289, 2420
BseSI GKGCMC 2 cut(s) 1437, 2093
BseXI GCAGC 4 cut(s) 425, 1705, 2223, 2587
BseYI CCCAGC 1 cut(s) 1437
BshFI GGCC 2 cut(s) 1686, 2139
BshNI GGYRCC 2 cut(s) 1432, 1951
BshTI ACCGGT 1 cut(s) 1948
BsiHKAI GWGCWC 2 cut(s) 376, 1510
BsiSI CCGG 2 cut(s) 1949, 2206
BslFI GGGAC 3 cut(s) 565, 1014, 2636
BslI CCNNNNNNNGG 3 cut(s) 767, 1802, 2135
BsmAI GTCTC 4 cut(s) 690, 869, 952, 2540
BsmFI GGGAC 3 cut(s) 565, 1014, 2636
BsmI GAATGC 4 cut(s) 1008, 1379, 2386, 2419
BsnI GGCC 2 cut(s) 1686, 2139
Bso31I GGTCTC 1 cut(s) 690
Bsp119I TTCGAA 1 cut(s) 2278
Bsp1286I GDGCHC 5 cut(s) 376, 427, 1437, 1510, 2093
BspACI CCGC 4 cut(s) 427, 472, 688, 1979
BspANI GGCC 2 cut(s) 1686, 2139
BspCNI CTCAG 4 cut(s) 408, 418, 1714, 1861
BspLI GGNNCC 5 cut(s) 189, 1113, 1434, 1953, 2204
BspMAI CTGCAG 1 cut(s) 2241
BspMI ACCTGC 2 cut(s) 73, 2230
BspPI GGATC 5 cut(s) 205, 1577, 2014, 2041, 2524
BspQI GCTCTTC 3 cut(s) 364, 415, 2604
BspT104I TTCGAA 1 cut(s) 2278
BspT107I GGYRCC 2 cut(s) 1432, 1951
BspTI CTTAAG 1 cut(s) 86
BspTNI GGTCTC 1 cut(s) 690
BsrDI GCAATG 1 cut(s) 48
BsrFI RCCGGY 1 cut(s) 1948
BsrI ACTGG 5 cut(s) 122, 1107, 2068, 2289, 2420
BssAI RCCGGY 1 cut(s) 1948
BssECI CCNNGG 5 cut(s) 192, 348, 1681, 1797, 2520
BssT1I CCWWGG 4 cut(s) 192, 348, 1797, 2520
Bst2UI CCWGG 4 cut(s) 701, 1683, 1907, 2051
Bst4CI ACNGT 6 cut(s) 1123, 1305, 1610, 2198, 2398, 2470
Bst6I CTCTTC 6 cut(s) 41, 364, 415, 1335, 2439, 2604
BstAFI CTTAAG 1 cut(s) 86
BstBI TTCGAA 1 cut(s) 2278
BstC8I GCNNGC 2 cut(s) 427, 1688
BstDEI CTNAG 7 cut(s) 405, 416, 540, 692, 1722, 1848, 2458
BstF5I GGATG 7 cut(s) 456, 830, 1111, 1159, 1604, 2189, 2653
BstMAI GTCTC 4 cut(s) 690, 869, 952, 2540
BstMWI GCNNNNNNNGC 3 cut(s) 38, 435, 2365
BstNI CCWGG 4 cut(s) 701, 1683, 1907, 2051
BstNSI RCATGY 3 cut(s) 263, 326, 1846
BstSCI CCNGG 4 cut(s) 699, 1681, 1905, 2049
BstSFI CTRYAG 4 cut(s) 34, 1386, 2237, 2466
BstSLI GKGCMC 2 cut(s) 1437, 2093
BstV1I GCAGC 4 cut(s) 425, 1705, 2223, 2587
BstV2I GAAGAC 3 cut(s) 1170, 1595, 2267
BstX2I RGATCY 3 cut(s) 1582, 1822, 2529
BstYI RGATCY 3 cut(s) 1582, 1822, 2529
BsuI GTATCC 1 cut(s) 2011
BsuRI GGCC 2 cut(s) 1686, 2139
BtgZI GCGATG 1 cut(s) 1236
BtsCI GGATG 7 cut(s) 456, 830, 1111, 1159, 1604, 2189, 2653
BtsI GCAGTG 2 cut(s) 1510, 2710
BtsIMutI CAGTG 6 cut(s) 1100, 1510, 2049, 2282, 2403, 2710
BveI ACCTGC 2 cut(s) 73, 2230
Cac8I GCNNGC 2 cut(s) 427, 1688
CaiI CAGNNNCTG 1 cut(s) 656
Cfr10I RCCGGY 1 cut(s) 1948
CseI GACGC 1 cut(s) 2471
Csp6I GTAC 5 cut(s) 149, 1559, 1896, 1952, 2071
CspAI ACCGGT 1 cut(s) 1948
CspCI CAANNNNNGTGG 2 cut(s) 2179, 2214
CviQI GTAC 5 cut(s) 149, 1559, 1896, 1952, 2071
DdeI CTNAG 7 cut(s) 405, 416, 540, 692, 1722, 1848, 2458
Eam1104I CTCTTC 6 cut(s) 41, 364, 415, 1335, 2439, 2604
EarI CTCTTC 6 cut(s) 41, 364, 415, 1335, 2439, 2604
Eco130I CCWWGG 4 cut(s) 192, 348, 1797, 2520
Eco147I AGGCCT 1 cut(s) 1686
Eco24I GRGCYC 1 cut(s) 427
Eco31I GGTCTC 1 cut(s) 690
Eco57I CTGAAG 9 cut(s) 291, 540, 678, 798, 933, 942, 1041, 1545, 1839
EcoRI GAATTC 1 cut(s) 1726
EcoRII CCWGG 4 cut(s) 699, 1681, 1905, 2049
EcoT14I CCWWGG 4 cut(s) 192, 348, 1797, 2520
EcoT22I ATGCAT 2 cut(s) 328, 599
EcoT38I GRGCYC 1 cut(s) 427
ErhI CCWWGG 4 cut(s) 192, 348, 1797, 2520
FalI AAGNNNNNCTT 6 cut(s) 1452, 1484, 2417, 2449, 2436, 2468
FaqI GGGAC 3 cut(s) 565, 1014, 2636
FauI CCCGC 4 cut(s) 434, 465, 695, 1972
FbaI TGATCA 1 cut(s) 2650
FblI GTMKAC 1 cut(s) 1829
Fnu4HI GCNGC 4 cut(s) 439, 1719, 2237, 2601
FokI GGATG 7 cut(s) 443, 817, 1118, 1166, 1611, 2196, 2640
FriOI GRGCYC 1 cut(s) 427
Fsp4HI GCNGC 4 cut(s) 439, 1719, 2237, 2601
FspBI CTAG 6 cut(s) 942, 1046, 1511, 1698, 1770, 2405
GluI GCNGC 4 cut(s) 439, 1719, 2237, 2601
GsaI CCCAGC 1 cut(s) 1441
GsuI CTGGAG 1 cut(s) 2306
HaeIII GGCC 2 cut(s) 1686, 2139
HapII CCGG 2 cut(s) 1949, 2206
HgaI GACGC 1 cut(s) 2471
HincII GTYRAC 1 cut(s) 1830
HindII GTYRAC 1 cut(s) 1830
HindIII AAGCTT 1 cut(s) 450
HpaII CCGG 2 cut(s) 1949, 2206
HphI GGTGA 3 cut(s) 401, 1787, 1938
Hpy166II GTNNAC 6 cut(s) 648, 1126, 1204, 1830, 1919, 2060
Hpy8I GTNNAC 6 cut(s) 648, 1126, 1204, 1830, 1919, 2060
HpyAV CCTTC 4 cut(s) 698, 820, 1796, 2252
HpyCH4III ACNGT 6 cut(s) 1123, 1305, 1610, 2198, 2398, 2470
HpyCH4IV ACGT 3 cut(s) 975, 1921, 2056
HpyF10VI GCNNNNNNNGC 3 cut(s) 38, 435, 2365
HpyF3I CTNAG 7 cut(s) 405, 416, 540, 692, 1722, 1848, 2458
HpySE526I ACGT 3 cut(s) 975, 1921, 2056
KpnI GGTACC 1 cut(s) 1955
Ksp22I TGATCA 1 cut(s) 2650
LguI GCTCTTC 3 cut(s) 364, 415, 2604
LmnI GCTCC 2 cut(s) 121, 505
Lsp1109I GCAGC 4 cut(s) 425, 1705, 2223, 2587
MaeI CTAG 6 cut(s) 942, 1046, 1511, 1698, 1770, 2405
MaeII ACGT 3 cut(s) 975, 1921, 2056
MaeIII GTNAC 6 cut(s) 1143, 1230, 1289, 1455, 1701, 2705
MflI RGATCY 3 cut(s) 1582, 1822, 2529
MhlI GDGCHC 5 cut(s) 376, 427, 1437, 1510, 2093
MlyI GAGTC 2 cut(s) 719, 2542
MmeI TCCRAC 4 cut(s) 560, 818, 1152, 2305
Mph1103I ATGCAT 2 cut(s) 328, 599
MroXI GAANNNNTTC 1 cut(s) 1396
MseI TTAA 5 cut(s) 87, 1353, 1613, 1629, 1670
MslI CAYNNNNRTG 3 cut(s) 381, 630, 885
MspCI CTTAAG 1 cut(s) 86
MspI CCGG 2 cut(s) 1949, 2206
MspR9I CCNGG 4 cut(s) 701, 1683, 1907, 2051
Mva1269I GAATGC 4 cut(s) 1008, 1379, 2386, 2419
MvaI CCWGG 4 cut(s) 701, 1683, 1907, 2051
MwoI GCNNNNNNNGC 3 cut(s) 38, 435, 2365
NlaIV GGNNCC 5 cut(s) 189, 1113, 1434, 1953, 2204
NmeAIII GCCGAG 2 cut(s) 467, 2322
NmuCI GTSAC 4 cut(s) 1143, 1230, 1455, 2705
NsiI ATGCAT 2 cut(s) 328, 599
NspI RCATGY 3 cut(s) 263, 326, 1846
NspV TTCGAA 1 cut(s) 2278
PaqCI CACCTGC 2 cut(s) 73, 2230
PceI AGGCCT 1 cut(s) 1686
PciI ACATGT 1 cut(s) 259
PciSI GCTCTTC 3 cut(s) 364, 415, 2604
PctI GAATGC 4 cut(s) 1008, 1379, 2386, 2419
PdmI GAANNNNTTC 1 cut(s) 1396
PflMI CCANNNNNTGG 1 cut(s) 767
PfoI TCCNGGA 1 cut(s) 2049
PinAI ACCGGT 1 cut(s) 1948
PkrI GCNGC 4 cut(s) 440, 1720, 2238, 2602
PleI GAGTC 2 cut(s) 719, 2542
PpsI GAGTC 2 cut(s) 719, 2542
PscI ACATGT 1 cut(s) 259
PsiI TTATAA 2 cut(s) 744, 1863
Psp1406I AACGTT 1 cut(s) 975
Psp6I CCWGG 4 cut(s) 699, 1681, 1905, 2049
PspFI CCCAGC 1 cut(s) 1437
PspGI CCWGG 4 cut(s) 699, 1681, 1905, 2049
PspN4I GGNNCC 5 cut(s) 189, 1113, 1434, 1953, 2204
PstI CTGCAG 1 cut(s) 2241
PstNI CAGNNNCTG 1 cut(s) 656
PsuI RGATCY 3 cut(s) 1582, 1822, 2529
RsaI GTAC 5 cut(s) 150, 1560, 1897, 1953, 2072
RsaNI GTAC 5 cut(s) 149, 1559, 1896, 1952, 2071
RseI CAYNNNNRTG 3 cut(s) 381, 630, 885
SalI GTCGAC 1 cut(s) 1828
SapI GCTCTTC 3 cut(s) 364, 415, 2604
SaqAI TTAA 5 cut(s) 87, 1353, 1613, 1629, 1670
SatI GCNGC 4 cut(s) 439, 1719, 2237, 2601
ScaI AGTACT 2 cut(s) 150, 2072
SchI GAGTC 2 cut(s) 719, 2542
ScrFI CCNGG 4 cut(s) 701, 1683, 1907, 2051
SduI GDGCHC 5 cut(s) 376, 427, 1437, 1510, 2093
SfcI CTRYAG 4 cut(s) 34, 1386, 2237, 2466
SfuI TTCGAA 1 cut(s) 2278
SmiMI CAYNNNNRTG 3 cut(s) 381, 630, 885
SmlI CTYRAG 1 cut(s) 86
SmoI CTYRAG 1 cut(s) 86
SseBI AGGCCT 1 cut(s) 1686
SsiI CCGC 4 cut(s) 427, 472, 688, 1979
SspI AATATT 1 cut(s) 1276
SspMI CTAG 6 cut(s) 942, 1046, 1511, 1698, 1770, 2405
StuI AGGCCT 1 cut(s) 1686
StyD4I CCNGG 4 cut(s) 699, 1681, 1905, 2049
StyI CCWWGG 4 cut(s) 192, 348, 1797, 2520
TaaI ACNGT 6 cut(s) 1123, 1305, 1610, 2198, 2398, 2470
TaiI ACGT 3 cut(s) 978, 1924, 2059
TaqI TCGA 4 cut(s) 129, 1451, 1829, 2278
TaqII GACCGA 1 cut(s) 1999
TatI WGTACW 2 cut(s) 148, 2070
Tru1I TTAA 5 cut(s) 87, 1353, 1613, 1629, 1670
Tru9I TTAA 5 cut(s) 87, 1353, 1613, 1629, 1670
TscAI CASTG 6 cut(s) 1107, 1510, 2049, 2289, 2403, 2710
TseFI GTSAC 4 cut(s) 1143, 1230, 1455, 2705
TseI GCWGC 4 cut(s) 438, 1718, 2236, 2600
Tsp45I GTSAC 4 cut(s) 1143, 1230, 1455, 2705
TspGWI ACGGA 1 cut(s) 449
TspRI CASTG 6 cut(s) 1107, 1510, 2049, 2289, 2403, 2710
Van91I CCANNNNNTGG 1 cut(s) 767
Vha464I CTTAAG 1 cut(s) 86
XapI RAATTY 6 cut(s) 1642, 1726, 1783, 1791, 1879, 2153
XbaI TCTAGA 2 cut(s) 941, 1045
XceI RCATGY 3 cut(s) 263, 326, 1846
XcmI CCANNNNNNNNNTGG 4 cut(s) 346, 595, 850, 2696
XmiI GTMKAC 1 cut(s) 1829
XmnI GAANNNNTTC 1 cut(s) 1396
XspI CTAG 6 cut(s) 942, 1046, 1511, 1698, 1770, 2405
ZrmI AGTACT 2 cut(s) 150, 2072
Zsp2I ATGCAT 2 cut(s) 328, 599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.