Rh7BG380800

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000439
Physical Location & Seq
Reverse (-)
41114522 .. 41122850
8329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG380800.1

Sequence Viewer

Length: 2667 bp
ATGATTTTCTGGCTTACAATTGTTTATGTGTTGCCATTTTCCTTGTCTTCTCATTATTATATTTTCCCTGTCTTCTCATTAAAATTGGTCAGCCCTGGAGTTGCTGGTATGACAAGTGACCAAACAATGCTCTACCTTAATCTTCCTTCTAATATGGTTGGCTCGTTCTTGATGGGGTGGTGCGGTGTTGTTTTCAAAGCAGATATATCATATAGGTCAGATTTTTTGGCAATTGGATTGACAACAGGGTTTCTGCTCGTTTCTGTGTTAACCCAGAACGAAGCTCTGTTTCTTGGGGGACTGAAGGGAAAGGACAAACTGCAAATTGAGATCTGCAAAAATTTCAAATCAGTGATGTGGCCAAAAGGTGGCAAAATTGCAAAGGCCTGTCGGGCAATGAAGGAATTTGGCATTGCTGAAGTCCAAACAAAGGCTGCGCTGAAGCAACTTCTGGAAGTGTATGAAAATAACTGGGATTTCATTGAAGCTGATGATTACAAAGAACTCTTTAATTTTATTGTACCAGATAACAAGAAGCCAAATGAAGAGAGAGTGCAGCCCAAGGTAAAAGGTGCTTTGATGCGTGAATCAAAGAGAGTGAATTCTAAGAACAAACTAGCTCCATCATATGATACAACTGAAGTTATTGAGCGTCCAACCAAGAGATATTGCACCAGGCAACAGAAAAATCAGCCATTATCTTGTACCAAATACTCTGAATCAAGCTTGAGAAGAACTCCACCAGAATGTATGCATATTAAGTTTGATGAAGAATCTGAGGAATCTGAGGAGTGGCAGCCATTAGTGAGAAAACCTCGACAAAGGCACACAAATCCGCAAGAAATTTGGGTTGCGGATAATAAGGTTGGTCCTGTGCCTGATGACTGTCCAGAACTTGATATAAGTCCGAATCTTATATGTGAAGGTAACTTCTCAGATTCTGATGGTTGTGATGTTGGTGAAGATGTGATGAAGTACCTGCAACTGAAATCTAAGAACAAACAACCTCCATCATATGATACACCTGAAGTCATTGAGTGGCAAACCAAGAGATTTTGCACCAGGCAACAGAAAAATCAGCCATCATCTCTTACCAAATACTCTGAATCAAGCTTGAGAAAAACTCCGGGAAAAATGCATGTGAAGTTTGATGAAGAATCTGAGGACTCGCAGCCATTAGTGAGAAAACCTCGACAAAGACACATAAATCCACAAGAAGTTTGGGTCACGAGGAATAACATTGATCATGTGCTTGATGACTGTCCAGAACTTGAAATAGGTCCCAGTCTTGTATGTGAATGTAACTTCACAAATTCTGATGGTTGTGATGTTGGTGAAGATGTGGTGAAGTACCTGCCAGTGGAATTATTGAATGAGAGCAATAGTGTGAGTGTCTCAGATGGGTCTCAGACTGATGTTGCATCTTCTTCCCCACTGAAAAATCCTTTGCTTTCTAGCTCTTCGCAAAAGTCTGGTTTTGATCTTCCTAACGGTGAAGTATCCCAAGAAATGATGGAAGAGAAATGCATAAAATCATATAGGACTGGAGAATGCTGCTCCATGGCGATAGTGACTAATGTCACTGAGAATATGCCAGAATTTATAACTTCTAATGAACAAGATCAAGGCAGTAAGTGCAGTGGTCTGGGTTCTTTTAACGAGCTATTTGTTGATCAGAACCTTATCAAGCCTATACGTATGCCTAATTATAGAGCGTTGGGTAGTTTTGAAGGTCTTCGCAGCTTAATTGGTATTAAAGTTAAGGATATGGAGAACATCTGTGGGGAAAGTGCAAAGAGATCAAGGGTTTCCAAAGGTCAAAAAACATCACAATTATGCAAGGTGGAAGCTGGGCATAACTACCATTCTTCACTTAGAGTTACAGAGTCTGCATTTAACATTGATGACATAACGAGAGGTGAGGAAATATTTAAGATTTCCTTGGAAAATGGAAGAAATGCCGAGTTGCCAACCTTTTCTTACATCGCGCAGAATTTAATTTATAATAAGGCCTCTGTGAGATTTGCACTTGCTAATATATCCGATGAGGATTGCTGTTCAAAATGTTATGGGGACTGTCTTACATCATCAATTCCTTGTCTTTGTGTGATTGCCAATGGGGGTGAATGTGCTTACATGCCAGGAGGATTGGTCAAGGAGAAGTTTCTGGAAGAATGTATATCTATGAAGCGTGAGCCTGAAAAGCACCCATACTTCTACTGTAAAAAGTGCCCACTAGTAAGGTTAGAGAATGCGAAGAGTTCTGTGGCATGCAAGGGACATTTGTTACGGAGGTTTATAAAGGAATGCTGGTATAAATGCGGTTGTAACAGGAGCTGTGGAAACCGGATTGTACAGAAAGGCATTGCTGTGAAATTGCAGGTATTTTTGACACCCGAAGGGAAAGGGTGGGGTCTAAGAACACTGGAGGCATTGCCAAGAGGGGCTTTTGTTTGTGAATATGTTGGAGAGATAGTAACCATCGACGAACTACATGAGCGAAGTGTGCTGAGTATTGGTAAAGAGCATACCTACCCAGTACTACTAGATGCAGACTGGGGTTCACAGGATGTGTTGAAAGATGAAAAGGCTCTTTGCTTGGACACTACAGTCTACGGAAATGTTGCAAGATTCATTAACCACAGGTATAAATGTGTATTCCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00310 ko04211 map00310 map04211
Pfam Domains
Protein Families
Pre-SET SET WIYLD

Protein Analysis

888

Amino Acids

100.18

Weight (kDa)

6.32

Isoelectric Point (pI)

52.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WIYLD PF10440 124 - 173 2e-15 Ubiquitin-binding WIYLD domain
SET PF00856 803 - 882 1.6e-08 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000439)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380
fragaria_vesca FvH4_2g02250 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_5g31170 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620
malus_domestica MD02G1265700.v1.1 MD04G1231900.v1.1 MD12G1043600.v1.1 MD12G1250000.v1.1
prunus_persica Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1
pyrus_communis pycom02g22720 pycom04g20520
rosa_chinensis RchiOBHm_Chr3g0449441 RchiOBHm_Chr4g0395181 RchiOBHm_Chr6g0245941 RchiOBHm_Chr7g0228041
rosa_laevigata RLG00000001593 RLG00000009641 RLG00000015284 RLG00000025830
rosa_multiflora Rmu_co8250301.1_g000001 Rmu_co8518901.1_g000001 Rmu_sc0004858.1_g000011 Rmu_sc0007224.1_g000005 Rmu_sc0007891.1_g000010 Rmu_sc0019478.1_g000002 Rmu_sc0024829.1_g000001 Rmu_sc0039188.1_g000001
rosa_roxburghii Rroxscaffold_3G00231620 Rroxscaffold_5G00340120 Rroxscaffold_6G00427390 Rroxscaffold_7G00215050
rosa_rugosa Rorug02G0620600 Rorug03G0359100.1 Rorug03G0359200.1 Rorug03G0359300.1 Rorug05G0517600 Rorug05G0517700 Rorug05G0517800 Rorug05G0517900 Rorug05G0518000 Rorug05G0518100 Rorug05G0518200 Rorug05G0518300.1 Rorug07G0245600
rosa_samantha Rh3AG018400 Rh3BG018800 Rh3CG017700 Rh4AG057300 Rh4BG056200 Rh4CG062300 Rh4DG053200 Rh6AG032500 Rh6BG028300 Rh6CG028300 Rh6CG028500 Rh6CG028600 Rh7AG399400 Rh7BG380800 Rh7CG417400 Rh7DG394900
rosa_wichuraiana Rw4G004610 Rw6G002670 Rw7G033190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1604, 2004, 2300
AasI GACNNNNNNGTC 1 cut(s) 2609
Acc36I ACCTGC 3 cut(s) 987, 1362, 2371
AccB7I CCANNNNNTGG 1 cut(s) 368
AccI GTMKAC 1 cut(s) 2613
AccII CGCG 1 cut(s) 1988
AciI CCGC 4 cut(s) 183, 836, 854, 2322
AcoI YGGCCR 1 cut(s) 359
AcsI RAATTY 7 cut(s) 340, 404, 601, 843, 1312, 1598, 1993
AcuI CTGAAG 5 cut(s) 323, 438, 461, 660, 1047
AfaI GTAC 6 cut(s) 522, 706, 977, 1352, 2355, 2541
AfiI CCNNNNNNNGG 3 cut(s) 368, 430, 1360
AgsI TTSAA 8 cut(s) 196, 346, 485, 1274, 1372, 1730, 2061, 2578
AhlI ACTAGT 1 cut(s) 2236
AjnI CCWGG 4 cut(s) 94, 674, 1061, 2140
Alw26I GTCTC 2 cut(s) 1399, 1410
AlwNI CAGNNNCTG 3 cut(s) 941, 1889, 2337
AoxI GGCC 3 cut(s) 359, 384, 2010
ApeKI GCWGC 6 cut(s) 434, 556, 796, 1171, 1554, 1740
ApoI RAATTY 7 cut(s) 340, 404, 601, 843, 1312, 1598, 1993
Asp700I GAANNNNTTC 1 cut(s) 1734
AspLEI GCGC 2 cut(s) 439, 1990
AspS9I GGNCC 2 cut(s) 869, 1280
AsuC2I CCSGG 1 cut(s) 1128
AsuHPI GGTGA 6 cut(s) 971, 1346, 1357, 1505, 1931, 2135
AvaII GGWCC 2 cut(s) 869, 1280
BaeGI GKGCMC 1 cut(s) 2234
BalI TGGCCA 1 cut(s) 361
BauI CACGAG 1 cut(s) 1228
BbsI GAAGAC 3 cut(s) 39, 64, 1727
BbvI GCAGC 6 cut(s) 421, 568, 808, 1183, 1541, 1752
BccI CCATC 9 cut(s) 166, 631, 938, 1018, 1090, 1313, 1394, 1507, 2489
BciT130I CCWGG 4 cut(s) 96, 676, 1063, 2142
BciVI GTATCC 1 cut(s) 1510
BclI TGATCA 2 cut(s) 1243, 1672
BcnI CCSGG 1 cut(s) 1128
BcoDI GTCTC 2 cut(s) 1399, 1410
BcuI ACTAGT 1 cut(s) 2236
BfaI CTAG 4 cut(s) 617, 1455, 2237, 2546
BfmI CTRYAG 1 cut(s) 2607
BfuAI ACCTGC 3 cut(s) 987, 1362, 2371
BfuI GTATCC 1 cut(s) 1510
BglI GCCNNNNNGGC 1 cut(s) 392
BglII AGATCT 1 cut(s) 330
BisI GCNGC 6 cut(s) 435, 557, 797, 1172, 1555, 1741
BlsI GCNGC 6 cut(s) 436, 558, 798, 1173, 1556, 1742
BmcAI AGTACT 1 cut(s) 2541
Bme1390I CCNGG 5 cut(s) 96, 676, 1063, 1128, 2142
Bme18I GGWCC 2 cut(s) 869, 1280
BmgT120I GGNCC 2 cut(s) 869, 1280
BmiI GGNNCC 1 cut(s) 1282
BmrFI CCNGG 5 cut(s) 96, 676, 1063, 1128, 2142
BmrI ACTGGG 4 cut(s) 481, 1278, 2531, 2566
BmsI GCATC 3 cut(s) 570, 1430, 2539
BmuI ACTGGG 4 cut(s) 481, 1278, 2531, 2566
BoxI GACNNNNGTC 1 cut(s) 1577
BpiI GAAGAC 3 cut(s) 39, 64, 1727
BplI GAGNNNNNCTC 8 cut(s) 721, 753, 799, 831, 1108, 1140, 1174, 1206
BpmI CTGGAG 3 cut(s) 117, 1566, 2447
BpuEI CTTGAG 2 cut(s) 748, 1135
BpuMI CCSGG 1 cut(s) 1128
BsaAI YACGTR 1 cut(s) 1697
BsaI GGTCTC 1 cut(s) 1410
BsaJI CCNNGG 4 cut(s) 94, 561, 1560, 1941
BsaWI WCCGGW 1 cut(s) 2346
BsaXI ACNNNNNCTCC 4 cut(s) 2136, 2166, 2460, 2490
Bsc4I CCNNNNNNNGG 3 cut(s) 368, 430, 1360
Bse1I ACTGG 7 cut(s) 476, 1284, 1358, 1549, 2430, 2537, 2561
Bse3DI GCAATG 4 cut(s) 402, 411, 2364, 2432
BseBI CCWGG 4 cut(s) 96, 676, 1063, 2142
BseDI CCNNGG 4 cut(s) 94, 561, 1560, 1941
BseGI GGATG 1 cut(s) 2575
BseLI CCNNNNNNNGG 3 cut(s) 368, 430, 1360
BseMI GCAATG 4 cut(s) 402, 411, 2364, 2432
BseMII CTCAG 8 cut(s) 768, 777, 948, 1152, 1410, 1421, 1575, 2501
BseNI ACTGG 7 cut(s) 476, 1284, 1358, 1549, 2430, 2537, 2561
BseRI GAGGAG 1 cut(s) 803
BseSI GKGCMC 1 cut(s) 2234
BseXI GCAGC 6 cut(s) 421, 568, 808, 1183, 1541, 1752
BseYI CCCAGC 1 cut(s) 1850
BsgI GTGCAG 2 cut(s) 575, 1657
Bsh1236I CGCG 1 cut(s) 1988
BshFI GGCC 3 cut(s) 361, 386, 2012
BsiSI CCGG 2 cut(s) 1127, 2347
BslFI GGGAC 4 cut(s) 312, 1266, 2087, 2292
BslI CCNNNNNNNGG 3 cut(s) 368, 430, 1360
BsmAI GTCTC 2 cut(s) 1399, 1410
BsmFI GGGAC 4 cut(s) 312, 1266, 2087, 2292
BsmI GAATGC 3 cut(s) 1556, 2257, 2312
BsnI GGCC 3 cut(s) 361, 386, 2012
Bso31I GGTCTC 1 cut(s) 1410
Bsp1286I GDGCHC 1 cut(s) 2234
Bsp1407I TGTACA 1 cut(s) 2353
Bsp143I GATC 6 cut(s) 330, 1243, 1480, 1621, 1672, 1799
Bsp19I CCATGG 1 cut(s) 1560
BspACI CCGC 4 cut(s) 183, 836, 854, 2322
BspANI GGCC 3 cut(s) 361, 386, 2012
BspCNI CTCAG 8 cut(s) 769, 778, 947, 1153, 1409, 1420, 1576, 2502
BspFNI CGCG 1 cut(s) 1988
BspLI GGNNCC 1 cut(s) 1282
BspMI ACCTGC 3 cut(s) 987, 1362, 2371
BspQI GCTCTTC 1 cut(s) 1465
BspTNI GGTCTC 1 cut(s) 1410
BsrDI GCAATG 4 cut(s) 402, 411, 2364, 2432
BsrGI TGTACA 1 cut(s) 2353
BsrI ACTGG 7 cut(s) 476, 1284, 1358, 1549, 2430, 2537, 2561
BssECI CCNNGG 4 cut(s) 94, 561, 1560, 1941
BssMI GATC 6 cut(s) 330, 1243, 1480, 1621, 1672, 1799
BssSI CACGAG 1 cut(s) 1228
BssT1I CCWWGG 3 cut(s) 561, 1560, 1941
Bst2BI CACGAG 1 cut(s) 1228
Bst2UI CCWGG 4 cut(s) 96, 676, 1063, 2142
Bst4CI ACNGT 6 cut(s) 887, 1262, 1493, 2078, 2222, 2611
Bst6I CTCTTC 4 cut(s) 540, 1465, 1512, 2252
BstAPI GCANNNNNTGC 1 cut(s) 1635
BstAUI TGTACA 1 cut(s) 2353
BstBAI YACGTR 1 cut(s) 1697
BstC8I GCNNGC 1 cut(s) 2272
BstDSI CCRYGG 1 cut(s) 1560
BstF5I GGATG 1 cut(s) 2575
BstFNI CGCG 1 cut(s) 1988
BstHHI GCGC 2 cut(s) 439, 1990
BstKTI GATC 6 cut(s) 333, 1246, 1483, 1624, 1675, 1802
BstMAI GTCTC 2 cut(s) 1399, 1410
BstMBI GATC 6 cut(s) 330, 1243, 1480, 1621, 1672, 1799
BstMWI GCNNNNNNNGC 4 cut(s) 392, 1635, 2203, 2506
BstNI CCWGG 4 cut(s) 96, 676, 1063, 2142
BstNSI RCATGY 3 cut(s) 1142, 2140, 2274
BstPAI GACNNNNGTC 1 cut(s) 1577
BstSCI CCNGG 5 cut(s) 94, 674, 1061, 1126, 2140
BstSFI CTRYAG 1 cut(s) 2607
BstSLI GKGCMC 1 cut(s) 2234
BstSNI TACGTA 1 cut(s) 1697
BstUI CGCG 1 cut(s) 1988
BstV1I GCAGC 6 cut(s) 421, 568, 808, 1183, 1541, 1752
BstV2I GAAGAC 3 cut(s) 39, 64, 1727
BstX2I RGATCY 1 cut(s) 330
BstYI RGATCY 1 cut(s) 330
BsuI GTATCC 1 cut(s) 1510
BsuRI GGCC 3 cut(s) 361, 386, 2012
BtgI CCRYGG 1 cut(s) 1560
BtgZI GCGATG 1 cut(s) 1969
BtsCI GGATG 1 cut(s) 2575
BtsI GCAGTG 1 cut(s) 1645
BtsIMutI CAGTG 6 cut(s) 357, 1365, 1433, 1581, 1645, 2423
BveI ACCTGC 3 cut(s) 987, 1362, 2371
Cac8I GCNNGC 1 cut(s) 2272
CaiI CAGNNNCTG 3 cut(s) 941, 1889, 2337
CfoI GCGC 2 cut(s) 439, 1990
Cfr13I GGNCC 2 cut(s) 869, 1280
CseI GACGC 1 cut(s) 641
Csp6I GTAC 6 cut(s) 521, 705, 976, 1351, 2354, 2540
CviAII CATG 6 cut(s) 1139, 1247, 1561, 2137, 2271, 2495
CviQI GTAC 6 cut(s) 521, 705, 976, 1351, 2354, 2540
DpnI GATC 6 cut(s) 332, 1245, 1482, 1623, 1674, 1801
DpnII GATC 6 cut(s) 330, 1243, 1480, 1621, 1672, 1799
DrdI GACNNNNNNGTC 1 cut(s) 2609
DseDI GACNNNNNNGTC 1 cut(s) 2609
EaeI YGGCCR 1 cut(s) 359
Eam1104I CTCTTC 4 cut(s) 540, 1465, 1512, 2252
EarI CTCTTC 4 cut(s) 540, 1465, 1512, 2252
Eco105I TACGTA 1 cut(s) 1697
Eco130I CCWWGG 3 cut(s) 561, 1560, 1941
Eco147I AGGCCT 2 cut(s) 386, 2012
Eco31I GGTCTC 1 cut(s) 1410
Eco47I GGWCC 2 cut(s) 869, 1280
Eco57I CTGAAG 5 cut(s) 323, 438, 461, 660, 1047
EcoO109I RGGNCCY 1 cut(s) 1280
EcoRI GAATTC 1 cut(s) 601
EcoRII CCWGG 4 cut(s) 94, 674, 1061, 2140
EcoT14I CCWWGG 3 cut(s) 561, 1560, 1941
EcoT22I ATGCAT 3 cut(s) 756, 1140, 1529
ErhI CCWWGG 3 cut(s) 561, 1560, 1941
FaeI CATG 6 cut(s) 1142, 1250, 1564, 2140, 2274, 2498
FalI AAGNNNNNCTT 4 cut(s) 1925, 1957, 2431, 2463
FaqI GGGAC 4 cut(s) 312, 1266, 2087, 2292
FatI CATG 6 cut(s) 1138, 1246, 1560, 2136, 2270, 2494
FauNDI CATATG 2 cut(s) 628, 1015
FbaI TGATCA 2 cut(s) 1243, 1672
FblI GTMKAC 1 cut(s) 2613
Fnu4HI GCNGC 6 cut(s) 435, 557, 797, 1172, 1555, 1741
FokI GGATG 1 cut(s) 2582
Fsp4HI GCNGC 6 cut(s) 435, 557, 797, 1172, 1555, 1741
FspBI CTAG 4 cut(s) 617, 1455, 2237, 2546
GlaI GCGC 2 cut(s) 438, 1989
GluI GCNGC 6 cut(s) 435, 557, 797, 1172, 1555, 1741
GsaI CCCAGC 1 cut(s) 1854
GsuI CTGGAG 3 cut(s) 117, 1566, 2447
HaeIII GGCC 3 cut(s) 361, 386, 2012
HapII CCGG 2 cut(s) 1127, 2347
HgaI GACGC 1 cut(s) 641
HhaI GCGC 2 cut(s) 439, 1990
Hin1II CATG 6 cut(s) 1142, 1250, 1564, 2140, 2274, 2498
Hin6I GCGC 2 cut(s) 437, 1988
HinP1I GCGC 2 cut(s) 437, 1988
HincII GTYRAC 1 cut(s) 270
HindII GTYRAC 1 cut(s) 270
HindIII AAGCTT 2 cut(s) 724, 1111
HpaI GTTAAC 1 cut(s) 270
HpaII CCGG 2 cut(s) 1127, 2347
HphI GGTGA 6 cut(s) 971, 1346, 1357, 1505, 1931, 2135
Hpy166II GTNNAC 3 cut(s) 270, 2564, 2614
Hpy188III TCNNGA 6 cut(s) 169, 452, 890, 1228, 1265, 2168
Hpy8I GTNNAC 3 cut(s) 270, 2564, 2614
Hpy99I CGWCG 1 cut(s) 2489
HpyAV CCTTC 6 cut(s) 156, 298, 394, 917, 1724, 2393
HpyCH4III ACNGT 6 cut(s) 887, 1262, 1493, 2078, 2222, 2611
HpyCH4IV ACGT 1 cut(s) 1696
HpyF10VI GCNNNNNNNGC 4 cut(s) 392, 1635, 2203, 2506
HpySE526I ACGT 1 cut(s) 1696
Hsp92II CATG 6 cut(s) 1142, 1250, 1564, 2140, 2274, 2498
HspAI GCGC 2 cut(s) 437, 1988
Ksp22I TGATCA 2 cut(s) 1243, 1672
KspAI GTTAAC 1 cut(s) 270
Kzo9I GATC 6 cut(s) 330, 1243, 1480, 1621, 1672, 1799
LguI GCTCTTC 1 cut(s) 1465
LmnI GCTCC 3 cut(s) 625, 1562, 2334
Lsp1109I GCAGC 6 cut(s) 421, 568, 808, 1183, 1541, 1752
LweI GCATC 3 cut(s) 570, 1430, 2539
MaeI CTAG 4 cut(s) 617, 1455, 2237, 2546
MaeII ACGT 1 cut(s) 1696
MalI GATC 6 cut(s) 332, 1245, 1482, 1623, 1674, 1801
MboI GATC 6 cut(s) 330, 1243, 1480, 1621, 1672, 1799
MfeI CAATTG 2 cut(s) 18, 231
MflI RGATCY 1 cut(s) 330
MhlI GDGCHC 1 cut(s) 2234
MlsI TGGCCA 1 cut(s) 361
MluNI TGGCCA 1 cut(s) 361
MlyI GAGTC 2 cut(s) 1160, 1895
MmeI TCCRAC 2 cut(s) 680, 2446
Mox20I TGGCCA 1 cut(s) 361
Mph1103I ATGCAT 3 cut(s) 756, 1140, 1529
MroXI GAANNNNTTC 1 cut(s) 1734
MscI TGGCCA 1 cut(s) 361
MslI CAYNNNNRTG 3 cut(s) 745, 1834, 2369
Msp20I TGGCCA 1 cut(s) 361
MspI CCGG 2 cut(s) 1127, 2347
MspR9I CCNGG 5 cut(s) 96, 676, 1063, 1128, 2142
MunI CAATTG 2 cut(s) 18, 231
Mva1269I GAATGC 3 cut(s) 1556, 2257, 2312
MvaI CCWGG 4 cut(s) 96, 676, 1063, 2142
MvnI CGCG 1 cut(s) 1988
MwoI GCNNNNNNNGC 4 cut(s) 392, 1635, 2203, 2506
NciI CCSGG 1 cut(s) 1128
NcoI CCATGG 1 cut(s) 1560
NdeI CATATG 2 cut(s) 628, 1015
NdeII GATC 6 cut(s) 330, 1243, 1480, 1621, 1672, 1799
NlaIII CATG 6 cut(s) 1142, 1250, 1564, 2140, 2274, 2498
NlaIV GGNNCC 1 cut(s) 1282
NmeAIII GCCGAG 1 cut(s) 1987
NmuCI GTSAC 4 cut(s) 116, 1225, 1570, 1579
NsiI ATGCAT 3 cut(s) 756, 1140, 1529
NspI RCATGY 3 cut(s) 1142, 2140, 2274
PaeI GCATGC 1 cut(s) 2274
PceI AGGCCT 2 cut(s) 386, 2012
PciSI GCTCTTC 1 cut(s) 1465
PctI GAATGC 3 cut(s) 1556, 2257, 2312
PdmI GAANNNNTTC 1 cut(s) 1734
PfeI GAWTC 9 cut(s) 587, 719, 773, 782, 910, 938, 1106, 1157, 2631
PflMI CCANNNNNTGG 1 cut(s) 368
PfoI TCCNGGA 1 cut(s) 1126
PkrI GCNGC 6 cut(s) 436, 558, 798, 1173, 1556, 1742
PleI GAGTC 2 cut(s) 1160, 1894
PpsI GAGTC 2 cut(s) 1160, 1894
Ppu21I YACGTR 1 cut(s) 1697
PpuMI RGGWCCY 1 cut(s) 1280
PshAI GACNNNNGTC 1 cut(s) 1577
PsiI TTATAA 3 cut(s) 1604, 2004, 2300
Psp5II RGGWCCY 1 cut(s) 1280
Psp6I CCWGG 4 cut(s) 94, 674, 1061, 2140
PspFI CCCAGC 1 cut(s) 1850
PspGI CCWGG 4 cut(s) 94, 674, 1061, 2140
PspN4I GGNNCC 1 cut(s) 1282
PspPI GGNCC 2 cut(s) 869, 1280
PspPPI RGGWCCY 1 cut(s) 1280
PstNI CAGNNNCTG 3 cut(s) 941, 1889, 2337
PsuI RGATCY 1 cut(s) 330
RsaI GTAC 6 cut(s) 522, 706, 977, 1352, 2355, 2541
RsaNI GTAC 6 cut(s) 521, 705, 976, 1351, 2354, 2540
RseI CAYNNNNRTG 3 cut(s) 745, 1834, 2369
SapI GCTCTTC 1 cut(s) 1465
SatI GCNGC 6 cut(s) 435, 557, 797, 1172, 1555, 1741
Sau3AI GATC 6 cut(s) 330, 1243, 1480, 1621, 1672, 1799
Sau96I GGNCC 2 cut(s) 869, 1280
ScaI AGTACT 1 cut(s) 2541
SchI GAGTC 2 cut(s) 1160, 1895
ScrFI CCNGG 5 cut(s) 96, 676, 1063, 1128, 2142
SduI GDGCHC 1 cut(s) 2234
SfaNI GCATC 3 cut(s) 570, 1430, 2539
SfcI CTRYAG 1 cut(s) 2607
SinI GGWCC 2 cut(s) 869, 1280
SmiMI CAYNNNNRTG 3 cut(s) 745, 1834, 2369
SmlI CTYRAG 2 cut(s) 727, 1114
SmoI CTYRAG 2 cut(s) 727, 1114
SnaBI TACGTA 1 cut(s) 1697
SpeI ACTAGT 1 cut(s) 2236
SphI GCATGC 1 cut(s) 2274
SseBI AGGCCT 2 cut(s) 386, 2012
SsiI CCGC 4 cut(s) 183, 836, 854, 2322
SspI AATATT 1 cut(s) 1929
SspMI CTAG 4 cut(s) 617, 1455, 2237, 2546
StuI AGGCCT 2 cut(s) 386, 2012
StyD4I CCNGG 5 cut(s) 94, 674, 1061, 1126, 2140
StyI CCWWGG 3 cut(s) 561, 1560, 1941
TaaI ACNGT 6 cut(s) 887, 1262, 1493, 2078, 2222, 2611
TaiI ACGT 1 cut(s) 1699
TaqI TCGA 3 cut(s) 817, 1192, 2484
TatI WGTACW 2 cut(s) 2353, 2539
TfiI GAWTC 9 cut(s) 587, 719, 773, 782, 910, 938, 1106, 1157, 2631
TscAI CASTG 6 cut(s) 357, 1365, 1440, 1588, 1645, 2430
TseFI GTSAC 4 cut(s) 116, 1225, 1570, 1579
TseI GCWGC 6 cut(s) 434, 556, 796, 1171, 1554, 1740
Tsp45I GTSAC 4 cut(s) 116, 1225, 1570, 1579
TspGWI ACGGA 2 cut(s) 2305, 2631
TspRI CASTG 6 cut(s) 357, 1365, 1440, 1588, 1645, 2430
Van91I CCANNNNNTGG 1 cut(s) 368
VpaK11BI GGWCC 2 cut(s) 869, 1280
XapI RAATTY 7 cut(s) 340, 404, 601, 843, 1312, 1598, 1993
XceI RCATGY 3 cut(s) 1142, 2140, 2274
XcmI CCANNNNNNNNNTGG 1 cut(s) 1218
XmiI GTMKAC 1 cut(s) 2613
XmnI GAANNNNTTC 1 cut(s) 1734
XspI CTAG 4 cut(s) 617, 1455, 2237, 2546
ZrmI AGTACT 1 cut(s) 2541
Zsp2I ATGCAT 3 cut(s) 756, 1140, 1529
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.