Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0000439

Physical Location & Seq

Genomic Coordinates Reverse (-)

70210492 .. 70215578

Gene Structure 5087 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0517900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGGATTCCGGCCGCAAACAACCAACCACCGTCTGCCACGTAGTGGCCATGCCCTATCCCGGCCGGGGCCACGTCAACCCCATGATGAACCTCTGCAAGTTACTAGCTTCACAAAACAGCAACGTTCTCATCACCTTCGTCGTCACAGAAGAGTGGCTCGGCTTCATCGGTTCGGAACCAAAGCCGGACAACGTTGTCTTCGCCACAATCCCCAACGTTATCCCATCGGAGCTGGTCCGCGCAGCCCACATGGTTGACTTCTTCGAAGCTCTCATGACCAAAATGGAAGCTCCGTTTGATCTGCTCGTGGATCGGCTGGAGCCGCCGCCGAGTTTGATACTGGGTGACACTTACCTGCCTTGGGCAGTTCGTGTCGGCAACCGGAGGAGGATCCCGGCGGCGTCGTTTTGGCCGATGTCGGCGTCCGTTTTCTCGGTGTTCCAACATTTTCATCTTCTTAAGAAAAATGGTCATTTCCCTATTGACTTGTCGGAGAAGGGCAATGACCGTGTGGATTACATCCCTGGAGTTTCTTCTACACCAATCCAAGACTTTCCCCCTTTGATGCATGGAAAAAACCCAACTATACTCCGTGTCGTTCTTGAAGCATTTTCCTGGGTACCTAAAGCACAATACCTCTTATTCTCATCCATCTATGAACTTGAAACCGAAGTCATTGACGTTTTAAGATCAGAATTCTCACTACCAATTTACACAGTTGGCCCATTAATACCTTACTTCAAAGCTAATGACCACCTGAGTAATGTTGACCATTCACAATGGCTAGATTCTCAACCTTGTAGCTCGGTCTTGTACATCTCCATGGGAAGCTTTTTGTCAGTTTCTAGTGCCCAAATGGATGAGATTGCAGCTGGTTTGCACAAAAGCAGTGTCCGGTTCTTCTGGGTGGCTCGTGCTGAAACCGATAGGTTACGAGATGTTTGTGGTTGTAAGGGGTTAGTAGTGCCGTGGTGTGACCAATTGAGTGTATTGAACCATTCTTGCATAGGGGGTTTCTTGACACATTGTGGGTGGAACTCAGTTAAAGAAGGTGTTTCCGCTGGTGTTCCTTTTCTTACCTTTCCATTAAATATAGATCAAGGTATGAATAGTAAGGCGATTGTGGAGGATTGGAAGATTGGGTGGAGGGTGAAGAGTACTGAGGCTAAAATAGATCATTTGGTGACGAGCGAGGAAATTGCAGGGTTGGTGAAGAAATTTATGGATTTGGAGGATGGGGAAGGGAAAGACATGAGGAGAAGAGCCAGAGAGTTTCAGCAGATATGTCATGGTGCAATTGCAGAGGGTGGATCATCTGAAAGTAACATTAGCGCCTTCATTAGTGACATTTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005911 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008757 GO:0009506 GO:0009987 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019538 GO:0030054 GO:0031974 GO:0031981 GO:0032259 GO:0034968 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0051276 GO:0055044 GO:0070013 GO:0071704 GO:0071840 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pre-SET SET WIYLD

Protein Analysis

451

Amino Acids

50.23

Weight (kDa)

5.79

Isoelectric Point (pI)

41.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	263 - 379	1.2e-17	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380 AT3G04380
fragaria_vesca	FvH4_2g02250 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_4g04470 FvH4_5g31170 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620 FvH4_6g01620
malus_domestica	MD02G1265700.v1.1 MD04G1231900.v1.1 MD12G1043600.v1.1 MD12G1250000.v1.1
prunus_persica	Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.1G047100_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.2G058800_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1 Prupe.6G351300_v2.0.a1
pyrus_communis	pycom02g22720 pycom04g20520
rosa_chinensis	RchiOBHm_Chr3g0449441 RchiOBHm_Chr4g0395181 RchiOBHm_Chr6g0245941 RchiOBHm_Chr7g0228041
rosa_laevigata	RLG00000001593 RLG00000009641 RLG00000015284 RLG00000025830
rosa_multiflora	Rmu_co8250301.1_g000001 Rmu_co8518901.1_g000001 Rmu_sc0004858.1_g000011 Rmu_sc0007224.1_g000005 Rmu_sc0007891.1_g000010 Rmu_sc0019478.1_g000002 Rmu_sc0024829.1_g000001 Rmu_sc0039188.1_g000001
rosa_roxburghii	Rroxscaffold_3G00231620 Rroxscaffold_5G00340120 Rroxscaffold_6G00427390 Rroxscaffold_7G00215050
rosa_rugosa	Rorug02G0620600 Rorug03G0359100.1 Rorug03G0359200.1 Rorug03G0359300.1 Rorug05G0517600 Rorug05G0517700 Rorug05G0517800 Rorug05G0517900 Rorug05G0518000 Rorug05G0518100 Rorug05G0518200 Rorug05G0518300.1 Rorug07G0245600
rosa_samantha	Rh3AG018400 Rh3BG018800 Rh3CG017700 Rh4AG057300 Rh4BG056200 Rh4CG062300 Rh4DG053200 Rh6AG032500 Rh6BG028300 Rh6CG028300 Rh6CG028500 Rh6CG028600 Rh7AG399400 Rh7BG380800 Rh7CG417400 Rh7DG394900
rosa_wichuraiana	Rw4G004610 Rw6G002670 Rw7G033190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	194
Acc36I	ACCTGC	1 cut(s)	363
Acc65I	GGTACC	1 cut(s)	619
AccB1I	GGYRCC	1 cut(s)	619
AccB7I	CCANNNNNTGG	1 cut(s)	43
AccII	CGCG	1 cut(s)	240
AciI	CCGC	6 cut(s)	13, 238, 323, 326, 398, 1059
AclI	AACGTT	3 cut(s)	123, 192, 216
AclWI	GGATC	4 cut(s)	318, 385, 398, 1318
AcoI	YGGCCR	4 cut(s)	10, 45, 61, 410
AcsI	RAATTY	2 cut(s)	695, 1217
AcyI	GRCGYC	2 cut(s)	401, 422
AdeI	CACNNNGTG	2 cut(s)	43, 1028
AfaI	GTAC	3 cut(s)	621, 815, 1159
AfiI	CCNNNNNNNGG	4 cut(s)	43, 59, 65, 361
AflII	CTTAAG	1 cut(s)	458
AgsI	TTSAA	4 cut(s)	605, 665, 742, 994
AjiI	CACGTC	1 cut(s)	73
AjnI	CCWGG	2 cut(s)	523, 614
AluBI	AGCT	8 cut(s)	107, 232, 269, 290, 746, 804, 831, 872
AluI	AGCT	8 cut(s)	107, 232, 269, 290, 746, 804, 831, 872
AlwI	GGATC	4 cut(s)	318, 385, 398, 1318
AoxI	GGCC	6 cut(s)	10, 45, 61, 67, 410, 721
ApeKI	GCWGC	2 cut(s)	242, 869
ApoI	RAATTY	2 cut(s)	695, 1217
ArsI	GACNNNNNNTTYG	2 cut(s)	876, 908
AseI	ATTAAT	1 cut(s)	728
Asp718I	GGTACC	1 cut(s)	619
AspLEI	GCGC	2 cut(s)	242, 1334
AspS9I	GGNCC	3 cut(s)	67, 235, 722
AsuC2I	CCSGG	3 cut(s)	60, 65, 395
AsuHPI	GGTGA	5 cut(s)	124, 356, 1162, 1195, 1222
AsuII	TTCGAA	1 cut(s)	264
AvaII	GGWCC	1 cut(s)	235
BaeGI	GKGCMC	1 cut(s)	853
BalI	TGGCCA	1 cut(s)	47
BamHI	GGATCC	1 cut(s)	390
BanI	GGYRCC	1 cut(s)	619
BauI	CACGAG	2 cut(s)	305, 912
BbsI	GAAGAC	1 cut(s)	190
BbvI	GCAGC	2 cut(s)	254, 881
BccI	CCATC	3 cut(s)	232, 659, 1229
BceAI	ACGGC	1 cut(s)	952
BcgI	CGANNNNNNTGC	2 cut(s)	1181, 1215
BciT130I	CCWGG	2 cut(s)	525, 616
BcnI	CCSGG	3 cut(s)	60, 65, 395
BfaI	CTAG	3 cut(s)	104, 785, 846
BfoI	RGCGCY	1 cut(s)	1335
BfrI	CTTAAG	1 cut(s)	458
BfuAI	ACCTGC	1 cut(s)	363
BisI	GCNGC	6 cut(s)	13, 243, 323, 326, 399, 870
BlsI	GCNGC	6 cut(s)	14, 244, 324, 327, 400, 871
BmcAI	AGTACT	1 cut(s)	1159
Bme1390I	CCNGG	5 cut(s)	60, 65, 395, 525, 616
Bme18I	GGWCC	1 cut(s)	235
BmgBI	CACGTC	1 cut(s)	73
BmgT120I	GGNCC	3 cut(s)	67, 235, 722
BmiI	GGNNCC	5 cut(s)	68, 177, 321, 392, 621
BmrFI	CCNGG	5 cut(s)	60, 65, 395, 525, 616
BmrI	ACTGGG	1 cut(s)	350
BmsI	GCATC	1 cut(s)	555
BmuI	ACTGGG	1 cut(s)	350
BpiI	GAAGAC	1 cut(s)	190
BpmI	CTGGAG	2 cut(s)	338, 546
Bpu14I	TTCGAA	1 cut(s)	264
BpuMI	CCSGG	3 cut(s)	60, 65, 395
BsaAI	YACGTR	1 cut(s)	40
BsaHI	GRCGYC	2 cut(s)	401, 422
BsaJI	CCNNGG	6 cut(s)	64, 359, 523, 615, 822, 968
BsaWI	WCCGGW	2 cut(s)	381, 894
Bsc4I	CCNNNNNNNGG	4 cut(s)	43, 59, 65, 361
Bse1I	ACTGG	1 cut(s)	345
Bse3DI	GCAATG	1 cut(s)	508
BseBI	CCWGG	2 cut(s)	525, 616
BseDI	CCNNGG	6 cut(s)	64, 359, 523, 615, 822, 968
BseGI	GGATG	4 cut(s)	519, 647, 865, 1240
BseLI	CCNNNNNNNGG	4 cut(s)	43, 59, 65, 361
BseMI	GCAATG	1 cut(s)	508
BseMII	CTCAG	3 cut(s)	749, 1053, 1152
BseNI	ACTGG	1 cut(s)	345
BseRI	GAGGAG	2 cut(s)	400, 1270
BseSI	GKGCMC	1 cut(s)	853
BseX3I	CGGCCG	2 cut(s)	10, 61
BseXI	GCAGC	2 cut(s)	254, 881
Bsh1236I	CGCG	1 cut(s)	240
Bsh1285I	CGRYCG	2 cut(s)	13, 64
BshFI	GGCC	6 cut(s)	12, 47, 63, 69, 412, 723
BshNI	GGYRCC	1 cut(s)	619
BsiEI	CGRYCG	2 cut(s)	13, 64
BsiSI	CCGG	7 cut(s)	9, 60, 64, 185, 382, 395, 895
BslI	CCNNNNNNNGG	4 cut(s)	43, 59, 65, 361
BsnI	GGCC	6 cut(s)	12, 47, 63, 69, 412, 723
Bsp119I	TTCGAA	1 cut(s)	264
Bsp1286I	GDGCHC	1 cut(s)	853
Bsp1407I	TGTACA	1 cut(s)	813
Bsp143I	GATC	7 cut(s)	298, 310, 390, 689, 1096, 1174, 1310
Bsp19I	CCATGG	1 cut(s)	822
BspACI	CCGC	6 cut(s)	13, 238, 323, 326, 398, 1059
BspANI	GGCC	6 cut(s)	12, 47, 63, 69, 412, 723
BspCNI	CTCAG	3 cut(s)	750, 1052, 1153
BspFNI	CGCG	1 cut(s)	240
BspHI	TCATGA	1 cut(s)	273
BspLI	GGNNCC	5 cut(s)	68, 177, 321, 392, 621
BspMI	ACCTGC	1 cut(s)	363
BspPI	GGATC	4 cut(s)	318, 385, 398, 1318
BspQI	GCTCTTC	1 cut(s)	1255
BspT104I	TTCGAA	1 cut(s)	264
BspT107I	GGYRCC	1 cut(s)	619
BspTI	CTTAAG	1 cut(s)	458
BsrDI	GCAATG	1 cut(s)	508
BsrGI	TGTACA	1 cut(s)	813
BsrI	ACTGG	1 cut(s)	345
BssECI	CCNNGG	6 cut(s)	64, 359, 523, 615, 822, 968
BssMI	GATC	7 cut(s)	298, 310, 390, 689, 1096, 1174, 1310
BssNI	GRCGYC	2 cut(s)	401, 422
BssSI	CACGAG	2 cut(s)	305, 912
BssT1I	CCWWGG	2 cut(s)	359, 822
Bst2BI	CACGAG	2 cut(s)	305, 912
Bst2UI	CCWGG	2 cut(s)	525, 616
Bst4CI	ACNGT	3 cut(s)	31, 509, 718
Bst6I	CTCTTC	3 cut(s)	144, 1148, 1255
BstACI	GRCGYC	2 cut(s)	401, 422
BstAFI	CTTAAG	1 cut(s)	458
BstAUI	TGTACA	1 cut(s)	813
BstBAI	YACGTR	1 cut(s)	40
BstBI	TTCGAA	1 cut(s)	264
BstDEI	CTNAG	3 cut(s)	758, 1039, 1161
BstDSI	CCRYGG	2 cut(s)	822, 968
BstF5I	GGATG	4 cut(s)	519, 647, 865, 1240
BstFNI	CGCG	1 cut(s)	240
BstH2I	RGCGCY	1 cut(s)	1335
BstHHI	GCGC	2 cut(s)	242, 1334
BstKTI	GATC	7 cut(s)	301, 313, 393, 692, 1099, 1177, 1313
BstMBI	GATC	7 cut(s)	298, 310, 390, 689, 1096, 1174, 1310
BstMCI	CGRYCG	2 cut(s)	13, 64
BstMWI	GCNNNNNNNGC	1 cut(s)	322
BstNI	CCWGG	2 cut(s)	525, 616
BstSCI	CCNGG	5 cut(s)	58, 63, 393, 523, 614
BstSLI	GKGCMC	1 cut(s)	853
BstUI	CGCG	1 cut(s)	240
BstV1I	GCAGC	2 cut(s)	254, 881
BstV2I	GAAGAC	1 cut(s)	190
BstX2I	RGATCY	1 cut(s)	390
BstYI	RGATCY	1 cut(s)	390
BstZI	CGGCCG	2 cut(s)	10, 61
BsuRI	GGCC	6 cut(s)	12, 47, 63, 69, 412, 723
BtgI	CCRYGG	2 cut(s)	822, 968
BtrI	CACGTC	1 cut(s)	73
BtsCI	GGATG	4 cut(s)	519, 647, 865, 1240
BtsI	GCAGTG	1 cut(s)	895
BtsIMutI	CAGTG	1 cut(s)	895
BveI	ACCTGC	1 cut(s)	363
CciI	TCATGA	1 cut(s)	273
CfoI	GCGC	2 cut(s)	242, 1334
Cfr13I	GGNCC	3 cut(s)	67, 235, 722
CseI	GACGC	2 cut(s)	390, 411
Csp6I	GTAC	3 cut(s)	620, 814, 1158
CviAII	CATG	8 cut(s)	49, 82, 250, 274, 569, 823, 1252, 1289
CviQI	GTAC	3 cut(s)	620, 814, 1158
DdeI	CTNAG	3 cut(s)	758, 1039, 1161
DpnI	GATC	7 cut(s)	300, 312, 392, 691, 1098, 1176, 1312
DpnII	GATC	7 cut(s)	298, 310, 390, 689, 1096, 1174, 1310
DraIII	CACNNNGTG	2 cut(s)	43, 1028
DrdI	GACNNNNNNGTC	1 cut(s)	194
DseDI	GACNNNNNNGTC	1 cut(s)	194
EaeI	YGGCCR	4 cut(s)	10, 45, 61, 410
EagI	CGGCCG	2 cut(s)	10, 61
Eam1104I	CTCTTC	3 cut(s)	144, 1148, 1255
EarI	CTCTTC	3 cut(s)	144, 1148, 1255
EclXI	CGGCCG	2 cut(s)	10, 61
Eco130I	CCWWGG	2 cut(s)	359, 822
Eco47I	GGWCC	1 cut(s)	235
Eco52I	CGGCCG	2 cut(s)	10, 61
EcoRI	GAATTC	1 cut(s)	695
EcoRII	CCWGG	2 cut(s)	523, 614
EcoT14I	CCWWGG	2 cut(s)	359, 822
EcoT22I	ATGCAT	1 cut(s)	570
ErhI	CCWWGG	2 cut(s)	359, 822
FaeI	CATG	8 cut(s)	52, 85, 253, 277, 572, 826, 1255, 1292
FatI	CATG	8 cut(s)	48, 81, 249, 273, 568, 822, 1251, 1288
Fnu4HI	GCNGC	6 cut(s)	13, 243, 323, 326, 399, 870
FokI	GGATG	4 cut(s)	506, 634, 872, 1247
Fsp4HI	GCNGC	6 cut(s)	13, 243, 323, 326, 399, 870
FspBI	CTAG	3 cut(s)	104, 785, 846
GlaI	GCGC	2 cut(s)	241, 1333
GluI	GCNGC	6 cut(s)	13, 243, 323, 326, 399, 870
GsuI	CTGGAG	2 cut(s)	338, 546
HaeII	RGCGCY	1 cut(s)	1335
HaeIII	GGCC	6 cut(s)	12, 47, 63, 69, 412, 723
HapII	CCGG	7 cut(s)	9, 60, 64, 185, 382, 395, 895
HgaI	GACGC	2 cut(s)	390, 411
HhaI	GCGC	2 cut(s)	242, 1334
Hin1I	GRCGYC	2 cut(s)	401, 422
Hin1II	CATG	8 cut(s)	52, 85, 253, 277, 572, 826, 1255, 1292
Hin6I	GCGC	2 cut(s)	240, 1332
HinP1I	GCGC	2 cut(s)	240, 1332
HincII	GTYRAC	3 cut(s)	76, 256, 769
HindII	GTYRAC	3 cut(s)	76, 256, 769
HindIII	AAGCTT	1 cut(s)	829
HinfI	GANTC	2 cut(s)	5, 788
HpaII	CCGG	7 cut(s)	9, 60, 64, 185, 382, 395, 895
HphI	GGTGA	5 cut(s)	124, 356, 1162, 1195, 1222
Hpy166II	GTNNAC	3 cut(s)	76, 256, 769
Hpy188I	TCNGA	5 cut(s)	175, 229, 493, 694, 1318
Hpy188III	TCNNGA	3 cut(s)	274, 602, 1018
Hpy8I	GTNNAC	3 cut(s)	76, 256, 769
Hpy99I	CGWCG	2 cut(s)	143, 406
HpyAV	CCTTC	5 cut(s)	145, 490, 1043, 1235, 1345
HpyCH4III	ACNGT	3 cut(s)	31, 509, 718
HpyCH4IV	ACGT	6 cut(s)	39, 72, 123, 192, 216, 681
HpyCH4V	TGCA	8 cut(s)	96, 568, 869, 880, 1005, 1202, 1295, 1301
HpyF10VI	GCNNNNNNNGC	1 cut(s)	322
HpyF3I	CTNAG	3 cut(s)	758, 1039, 1161
HpySE526I	ACGT	6 cut(s)	39, 72, 123, 192, 216, 681
Hsp92I	GRCGYC	2 cut(s)	401, 422
Hsp92II	CATG	8 cut(s)	52, 85, 253, 277, 572, 826, 1255, 1292
HspAI	GCGC	2 cut(s)	240, 1332
KpnI	GGTACC	1 cut(s)	623
Kzo9I	GATC	7 cut(s)	298, 310, 390, 689, 1096, 1174, 1310
LguI	GCTCTTC	1 cut(s)	1255
LmnI	GCTCC	3 cut(s)	229, 295, 319
Lsp1109I	GCAGC	2 cut(s)	254, 881
LweI	GCATC	1 cut(s)	555
MaeI	CTAG	3 cut(s)	104, 785, 846
MaeII	ACGT	6 cut(s)	39, 72, 123, 192, 216, 681
MaeIII	GTNAC	8 cut(s)	99, 142, 344, 930, 974, 1183, 1322, 1343
MalI	GATC	7 cut(s)	300, 312, 392, 691, 1098, 1176, 1312
MboI	GATC	7 cut(s)	298, 310, 390, 689, 1096, 1174, 1310
MfeI	CAATTG	2 cut(s)	980, 1296
MflI	RGATCY	1 cut(s)	390
MhlI	GDGCHC	1 cut(s)	853
MlsI	TGGCCA	1 cut(s)	47
MluCI	AATT	6 cut(s)	695, 708, 980, 1197, 1217, 1296
MluNI	TGGCCA	1 cut(s)	47
MmeI	TCCRAC	2 cut(s)	466, 471
Mox20I	TGGCCA	1 cut(s)	47
Mph1103I	ATGCAT	1 cut(s)	570
MscI	TGGCCA	1 cut(s)	47
MseI	TTAA	6 cut(s)	459, 686, 728, 1044, 1088, 1354
MslI	CAYNNNNRTG	1 cut(s)	821
Msp20I	TGGCCA	1 cut(s)	47
MspA1I	CMGCKG	2 cut(s)	872, 1061
MspCI	CTTAAG	1 cut(s)	458
MspI	CCGG	7 cut(s)	9, 60, 64, 185, 382, 395, 895
MspR9I	CCNGG	5 cut(s)	60, 65, 395, 525, 616
MunI	CAATTG	2 cut(s)	980, 1296
MvaI	CCWGG	2 cut(s)	525, 616
MvnI	CGCG	1 cut(s)	240
MwoI	GCNNNNNNNGC	1 cut(s)	322
NciI	CCSGG	3 cut(s)	60, 65, 395
NcoI	CCATGG	1 cut(s)	822
NdeII	GATC	7 cut(s)	298, 310, 390, 689, 1096, 1174, 1310
NlaIII	CATG	8 cut(s)	52, 85, 253, 277, 572, 826, 1255, 1292
NlaIV	GGNNCC	5 cut(s)	68, 177, 321, 392, 621
NmeAIII	GCCGAG	2 cut(s)	138, 354
NmuCI	GTSAC	5 cut(s)	142, 344, 974, 1183, 1343
NsiI	ATGCAT	1 cut(s)	570
NspV	TTCGAA	1 cut(s)	264
PagI	TCATGA	1 cut(s)	273
PciSI	GCTCTTC	1 cut(s)	1255
PcsI	WCGNNNNNNNCGW	1 cut(s)	410
PfeI	GAWTC	2 cut(s)	5, 788
PflMI	CCANNNNNTGG	1 cut(s)	43
PkrI	GCNGC	6 cut(s)	14, 244, 324, 327, 400, 871
Ppu21I	YACGTR	1 cut(s)	40
PshBI	ATTAAT	1 cut(s)	728
Psp1406I	AACGTT	3 cut(s)	123, 192, 216
Psp6I	CCWGG	2 cut(s)	523, 614
PspGI	CCWGG	2 cut(s)	523, 614
PspN4I	GGNNCC	5 cut(s)	68, 177, 321, 392, 621
PspPI	GGNCC	3 cut(s)	67, 235, 722
PsuI	RGATCY	1 cut(s)	390
PvuII	CAGCTG	1 cut(s)	872
RsaI	GTAC	3 cut(s)	621, 815, 1159
RsaNI	GTAC	3 cut(s)	620, 814, 1158
RseI	CAYNNNNRTG	1 cut(s)	821
SapI	GCTCTTC	1 cut(s)	1255
SaqAI	TTAA	6 cut(s)	459, 686, 728, 1044, 1088, 1354
SatI	GCNGC	6 cut(s)	13, 243, 323, 326, 399, 870
Sau3AI	GATC	7 cut(s)	298, 310, 390, 689, 1096, 1174, 1310
Sau96I	GGNCC	3 cut(s)	67, 235, 722
ScaI	AGTACT	1 cut(s)	1159
ScrFI	CCNGG	5 cut(s)	60, 65, 395, 525, 616
SduI	GDGCHC	1 cut(s)	853
SfaNI	GCATC	1 cut(s)	555
SfuI	TTCGAA	1 cut(s)	264
SinI	GGWCC	1 cut(s)	235
SmiMI	CAYNNNNRTG	1 cut(s)	821
SmlI	CTYRAG	1 cut(s)	458
SmoI	CTYRAG	1 cut(s)	458
Sse9I	AATT	6 cut(s)	695, 708, 980, 1197, 1217, 1296
SsiI	CCGC	6 cut(s)	13, 238, 323, 326, 398, 1059
SspMI	CTAG	3 cut(s)	104, 785, 846
StyD4I	CCNGG	5 cut(s)	58, 63, 393, 523, 614
StyI	CCWWGG	2 cut(s)	359, 822
TaaI	ACNGT	3 cut(s)	31, 509, 718
TaiI	ACGT	6 cut(s)	42, 75, 126, 195, 219, 684
TaqI	TCGA	1 cut(s)	264
TaqII	GACCGA	1 cut(s)	796
TasI	AATT	6 cut(s)	695, 708, 980, 1197, 1217, 1296
TatI	WGTACW	2 cut(s)	813, 1157
TauI	GCSGC	4 cut(s)	15, 325, 328, 401
TfiI	GAWTC	2 cut(s)	5, 788
Tru1I	TTAA	6 cut(s)	459, 686, 728, 1044, 1088, 1354
Tru9I	TTAA	6 cut(s)	459, 686, 728, 1044, 1088, 1354
TscAI	CASTG	1 cut(s)	895
TseFI	GTSAC	5 cut(s)	142, 344, 974, 1183, 1343
TseI	GCWGC	2 cut(s)	242, 869
Tsp45I	GTSAC	5 cut(s)	142, 344, 974, 1183, 1343
TspDTI	ATGAA	6 cut(s)	101, 154, 440, 672, 1121, 1327
TspGWI	ACGGA	3 cut(s)	282, 415, 581
TspRI	CASTG	1 cut(s)	895
Van91I	CCANNNNNTGG	1 cut(s)	43
Vha464I	CTTAAG	1 cut(s)	458
VpaK11BI	GGWCC	1 cut(s)	235
VspI	ATTAAT	1 cut(s)	728
XapI	RAATTY	2 cut(s)	695, 1217
XspI	CTAG	3 cut(s)	104, 785, 846
ZrmI	AGTACT	1 cut(s)	1159
Zsp2I	ATGCAT	1 cut(s)	570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.